Your job contains 1 sequence.
>013644
MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI
FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY
SCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE
YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYL
FEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLF
IWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEK
IMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNAADFESDEEEGETYLLGF
SDSDASSEGGGNQRECIIS
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013644
(439 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132796 - symbol:AT4G35140 "AT4G35140" species... 1058 5.7e-107 1
TAIR|locus:2121164 - symbol:AT4G38480 "AT4G38480" species... 1046 1.1e-105 1
MGI|MGI:1921356 - symbol:Dcaf6 "DDB1 and CUL4 associated ... 345 2.1e-52 2
UNIPROTKB|E1C4X5 - symbol:WDTC1 "Uncharacterized protein"... 327 4.7e-52 3
RGD|1561961 - symbol:Dcaf6 "DDB1 and CUL4 associated fact... 340 6.3e-52 2
UNIPROTKB|F1MBJ1 - symbol:DCAF6 "Uncharacterized protein"... 338 7.2e-52 2
UNIPROTKB|Q5R9B8 - symbol:DCAF6 "DDB1- and CUL4-associate... 338 1.1e-51 2
UNIPROTKB|Q58WW2 - symbol:DCAF6 "DDB1- and CUL4-associate... 338 1.1e-51 2
UNIPROTKB|E2REY6 - symbol:DCAF6 "Uncharacterized protein"... 338 1.6e-51 2
UNIPROTKB|F1NU19 - symbol:F1NU19 "Uncharacterized protein... 334 2.5e-51 2
UNIPROTKB|Q8N5D0 - symbol:WDTC1 "WD and tetratricopeptide... 315 1.6e-48 3
UNIPROTKB|B6CVL4 - symbol:WDTC1 "Uncharacterized protein"... 315 1.6e-48 3
UNIPROTKB|E2RA21 - symbol:WDTC1 "Uncharacterized protein"... 315 1.6e-48 3
RGD|1310362 - symbol:Wdtc1 "WD and tetratricopeptide repe... 316 2.9e-48 3
UNIPROTKB|Q5R448 - symbol:DCAF8 "DDB1- and CUL4-associate... 481 6.0e-48 2
MGI|MGI:2685541 - symbol:Wdtc1 "WD and tetratricopeptide ... 315 6.7e-48 3
MGI|MGI:91860 - symbol:Dcaf8 "DDB1 and CUL4 associated fa... 478 1.2e-47 2
RGD|1308513 - symbol:Dcaf8 "DDB1 and CUL4 associated fact... 472 5.3e-47 2
UNIPROTKB|Q5TAQ9 - symbol:DCAF8 "DDB1- and CUL4-associate... 471 6.8e-47 2
UNIPROTKB|G3V3G9 - symbol:DCAF8 "DDB1- and CUL4-associate... 471 7.5e-46 2
POMBASE|SPBC609.03 - symbol:iqw1 "WD repeat protein, Iqw1... 264 3.9e-40 2
FB|FBgn0000057 - symbol:adp "adipose" species:7227 "Droso... 281 3.7e-37 2
TAIR|locus:2183735 - symbol:ASG2 "AT5G10940" species:3702... 259 2.2e-36 2
ASPGD|ASPL0000058488 - symbol:AN0287 species:162425 "Emer... 241 6.3e-36 5
DICTYBASE|DDB_G0269686 - symbol:DDB_G0269686 "WD40 repeat... 233 1.6e-35 3
WB|WBGene00044440 - symbol:adpr-1 species:6239 "Caenorhab... 223 4.8e-33 2
ZFIN|ZDB-GENE-060929-808 - symbol:dcaf5 "ddb1 and cul4 as... 191 1.5e-22 2
UNIPROTKB|G3V6K4 - symbol:Dcaf5 "Protein Dcaf5" species:1... 186 3.1e-22 3
MGI|MGI:2444785 - symbol:Dcaf5 "DDB1 and CUL4 associated ... 186 3.9e-22 3
UNIPROTKB|Q96JK2 - symbol:DCAF5 "DDB1- and CUL4-associate... 186 7.7e-22 3
UNIPROTKB|E2QXZ3 - symbol:DCAF5 "Uncharacterized protein"... 186 7.9e-22 3
UNIPROTKB|F1N0J7 - symbol:DCAF5 "Uncharacterized protein"... 150 3.4e-14 3
UNIPROTKB|F1NXD8 - symbol:DCAF5 "Uncharacterized protein"... 150 4.2e-14 2
GENEDB_PFALCIPARUM|PF14_0262 - symbol:PF14_0262 "hypothet... 137 2.2e-13 3
UNIPROTKB|Q8ILI1 - symbol:PF14_0262 "Putative uncharacter... 137 2.2e-13 3
UNIPROTKB|H0YEI6 - symbol:WDTC1 "WD and tetratricopeptide... 165 1.6e-11 1
POMBASE|SPAC343.04c - symbol:SPAC343.04c "WD repeat prote... 134 2.0e-11 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 131 2.9e-11 2
ZFIN|ZDB-GENE-040718-126 - symbol:wdr83 "WD repeat domain... 121 8.6e-11 2
TAIR|locus:2061997 - symbol:AT2G47410 "AT2G47410" species... 160 2.2e-10 2
DICTYBASE|DDB_G0289711 - symbol:morg1 "mitogen-activated ... 112 2.5e-10 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 120 5.7e-10 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 125 1.5e-09 2
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 139 1.7e-09 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 129 1.7e-09 2
UNIPROTKB|F1SEX9 - symbol:WDR83 "Uncharacterized protein"... 123 2.8e-09 2
SGD|S000000680 - symbol:TUP1 "General repressor of transc... 133 3.0e-09 2
TAIR|locus:2158044 - symbol:AT5G49430 "AT5G49430" species... 153 3.3e-09 2
UNIPROTKB|Q9BRX9 - symbol:WDR83 "WD repeat domain-contain... 125 3.5e-09 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 120 4.2e-09 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 120 4.2e-09 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 123 6.1e-09 2
TAIR|locus:2158232 - symbol:HOS15 "high expression of osm... 130 6.8e-09 2
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 122 7.9e-09 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 104 8.8e-09 2
UNIPROTKB|E2RRL3 - symbol:WDR83 "Uncharacterized protein"... 126 8.8e-09 2
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 122 9.9e-09 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 122 1.0e-08 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 122 1.0e-08 2
UNIPROTKB|Q0VCN2 - symbol:MORG1 "Mitogen-activated protei... 123 1.2e-08 2
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 158 1.3e-08 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 104 1.3e-08 2
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 121 1.3e-08 2
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 122 1.6e-08 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 106 1.7e-08 2
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 107 1.7e-08 2
UNIPROTKB|G4MT88 - symbol:MGG_04651 "SET1 complex compone... 132 2.0e-08 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 122 2.0e-08 2
MGI|MGI:1915086 - symbol:Wdr83 "WD repeat domain containi... 117 2.3e-08 2
RGD|1306947 - symbol:Wdr83 "WD repeat domain 83" species:... 117 2.3e-08 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 106 3.5e-08 2
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 106 3.8e-08 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 102 4.5e-08 2
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 104 5.9e-08 2
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 135 6.2e-08 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 102 7.6e-08 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 102 7.6e-08 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 102 7.6e-08 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 102 7.6e-08 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 102 7.6e-08 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 102 7.6e-08 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 102 7.6e-08 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 102 7.6e-08 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 102 7.6e-08 2
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 101 7.9e-08 2
GENEDB_PFALCIPARUM|PF08_0019 - symbol:PF08_0019 "receptor... 150 7.9e-08 1
UNIPROTKB|Q8IBA0 - symbol:PfRACK "Receptor for activated ... 150 7.9e-08 1
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 150 8.4e-08 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 101 1.0e-07 2
UNIPROTKB|B4DRT0 - symbol:RBBP4 "Histone-binding protein ... 127 2.1e-07 1
TAIR|locus:2172432 - symbol:AT5G43920 "AT5G43920" species... 126 2.3e-07 3
WB|WBGene00017435 - symbol:F13H8.2 species:6239 "Caenorha... 118 4.0e-07 2
WB|WBGene00012479 - symbol:Y18D10A.9 species:6239 "Caenor... 144 4.2e-07 1
UNIPROTKB|Q9XW12 - symbol:Y18D10A.9 "Probable cytosolic i... 144 4.2e-07 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 128 6.2e-07 2
UNIPROTKB|E7EP32 - symbol:GNB2 "Guanine nucleotide-bindin... 115 7.8e-07 3
UNIPROTKB|F1S4C1 - symbol:DCAF5 "Uncharacterized protein"... 121 9.1e-07 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 95 1.0e-06 2
ZFIN|ZDB-GENE-030131-6622 - symbol:wdr48 "WD repeat domai... 144 1.4e-06 1
UNIPROTKB|Q05B17 - symbol:wdr48 "WD repeat-containing pro... 144 1.4e-06 1
WARNING: Descriptions of 270 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2132796 [details] [associations]
symbol:AT4G35140 "AT4G35140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 KO:K11804 HOGENOM:HOG000243561 EMBL:AY120722
EMBL:BT000028 IPI:IPI00525689 RefSeq:NP_195240.2 UniGene:At.44855
ProteinModelPortal:Q8L862 SMR:Q8L862 PRIDE:Q8L862
EnsemblPlants:AT4G35140.1 GeneID:829666 KEGG:ath:AT4G35140
TAIR:At4g35140 eggNOG:NOG257676 InParanoid:Q8L862 OMA:IDPRNSN
PhylomeDB:Q8L862 ProtClustDB:CLSN2684761 Genevestigator:Q8L862
Uniprot:Q8L862
Length = 496
Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
Identities = 214/456 (46%), Positives = 287/456 (62%)
Query: 3 RINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQ 62
R+ + KL HKGCVN V FN+ GD L+SGSDD+ V+ WDW+ K S+ SGH +N+FQ
Sbjct: 48 RLEIYKKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQ 107
Query: 63 TRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSC 122
+ MPF+DDR I+T +ADG VR I E +++T LG HQGR +KL +EPG+P+I Y+C
Sbjct: 108 AKFMPFSDDRTIVTCAADGMVRRASILEGDKVETSFLGLHQGRAHKLCIEPGNPHIFYTC 167
Query: 123 GEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYA 182
GEDG VQ FDLR+++ T LF C S + M++I+LNAI IDPRN N FAVGG +EYA
Sbjct: 168 GEDGLVQRFDLRTEAPTELFTCRSVDPRRRN-MDAIQLNAIAIDPRNSNLFAVGGMEEYA 226
Query: 183 RVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFE 242
R+YDIR+ D FCP HLIG ++ ITGLA+S SELL+SYNDE +YLF
Sbjct: 227 RLYDIRRFQGEGLNGFTRAADHFCPPHLIGNEDVGITGLAFSEQSELLVSYNDEFIYLFT 286
Query: 243 KNMGLGPSPL---------------SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND 287
MGLG +P+ S SP+D + VY GH+N +TVKGVNFFGP
Sbjct: 287 PGMGLGSNPIPSSPISKSPVSKSESSSSPKDENEHSVSLVYKGHKNCETVKGVNFFGPRS 346
Query: 288 EYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPM 347
EYV+SGSDCG +FIW+KKGG+L+R+M DRHVVN +EPHPHIP+ A+ GIE +K+W
Sbjct: 347 EYVVSGSDCGRIFIWRKKGGELIRVMEADRHVVNCIEPHPHIPVLASSGIESDIKVWTSK 406
Query: 348 PTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNAADFE 407
+ LP+N E + K +G R++ +++ + LQ R + + ER ++
Sbjct: 407 AAERATLPENIE-LRKRTPRGWM--YRVSSPHELLAQLFSLQNRSSSS-PEREGESSS-- 460
Query: 408 SDEEEGETYLLGFSD-SD---ASSEGGGNQRECIIS 439
+ E +L F+D SD A+ + GN E S
Sbjct: 461 ATGRELLDLILTFNDQSDDENATDDDDGNSHEDFFS 496
>TAIR|locus:2121164 [details] [associations]
symbol:AT4G38480 "AT4G38480" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
KO:K11804 IPI:IPI00543482 RefSeq:NP_568042.1 UniGene:At.31171
ProteinModelPortal:F4JTP6 SMR:F4JTP6 EnsemblPlants:AT4G38480.1
GeneID:830004 KEGG:ath:AT4G38480 OMA:VAGMDEY Uniprot:F4JTP6
Length = 471
Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
Identities = 199/363 (54%), Positives = 254/363 (69%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
++R+ L KL HKGCVN V FN+ GD L+SGSDD+ VI WDW+ K S+ SGH +NI
Sbjct: 42 LRRLGLDKKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNI 101
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY 120
FQ + MPF+DDR I+TS+AD QVR +I E G+++T LGKHQG V+KLAVEPGSP+ Y
Sbjct: 102 FQAKFMPFSDDRTIVTSAADKQVRYSKILESGQVETSLLGKHQGPVHKLAVEPGSPFSFY 161
Query: 121 SCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE 180
+CGEDG V+HFDLR+ AT LF C N + L+AI +DPRNP AV G DE
Sbjct: 162 TCGEDGAVKHFDLRTRVATNLFTCKEAKFNLV-----VYLHAIAVDPRNPGLLAVAGMDE 216
Query: 181 YARVYDIRKCH---WYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDEL 237
YARVYDIR WY+ P+D FCP HLIG +++ ITGLA+S+ SELL SY+DE
Sbjct: 217 YARVYDIRSYRSEGWYN---FTQPIDHFCPGHLIGDDHVGITGLAFSDQSELLASYSDEF 273
Query: 238 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG 297
+YLF +MGLGP+P S + ++R PQVY H N +TVKGVNFFGP EYV+SGSDCG
Sbjct: 274 IYLFTPDMGLGPTPYPSSTKT-EERMTPQVYKEHTNRETVKGVNFFGPKCEYVVSGSDCG 332
Query: 298 HLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDN 357
+FIW+KK G+L+R M DRHVVN +E HPH+P+ + GI+ +K+W P T+ P P N
Sbjct: 333 RIFIWRKKDGELLRAMEADRHVVNCIESHPHMPLMCSSGIDTDIKIWTPGGTEKPLSPGN 392
Query: 358 AEK 360
A++
Sbjct: 393 AKQ 395
>MGI|MGI:1921356 [details] [associations]
symbol:Dcaf6 "DDB1 and CUL4 associated factor 6"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR000048
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50096 PROSITE:PS50294 SMART:SM00015 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:1921356 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0045944
GO:GO:0016567 GO:GO:0030374 GO:GO:0080008
GeneTree:ENSGT00530000062951 CTD:55827 eggNOG:NOG292060
HOGENOM:HOG000038027 HOVERGEN:HBG054871 KO:K11795 OMA:QTEAIGP
EMBL:AK004618 EMBL:AK077238 IPI:IPI00120084 RefSeq:NP_083035.1
UniGene:Mm.227605 ProteinModelPortal:Q9DC22 SMR:Q9DC22
IntAct:Q9DC22 STRING:Q9DC22 PhosphoSite:Q9DC22 PaxDb:Q9DC22
PRIDE:Q9DC22 Ensembl:ENSMUST00000027856 GeneID:74106 KEGG:mmu:74106
UCSC:uc007djb.2 InParanoid:Q9DC22 OrthoDB:EOG4KPT96 NextBio:339790
Bgee:Q9DC22 CleanEx:MM_IQWD1 Genevestigator:Q9DC22 Uniprot:Q9DC22
Length = 876
Score = 345 (126.5 bits), Expect = 2.1e-52, Sum P(2) = 2.1e-52
Identities = 94/275 (34%), Positives = 142/275 (51%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDD-KLVIFWDWKDRREKFSYLSGHLDN 59
++R+ L L+ H GCVN + +N TG++++SGSDD KLVI + R+ + SGH N
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYS-RKVLTTIRSGHRAN 96
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPYI 118
IF + +P TDD++I++ S DG + I +D + + + H G Y++ P PY
Sbjct: 97 IFSAKFLPCTDDKQIVSCSGDGVIFYTNIEQDAETNRQCQFTCHYGTTYEIMTVPNDPYT 156
Query: 119 IYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPM--NSIRL-NAIVIDPRNPNYFAV 175
SCGEDG V+ FD R ++ C+ E+ K + N R ++ I P P Y AV
Sbjct: 157 FLSCGEDGTVRWFDTRIKTS-----CTK--EDCKDDILINCRRAATSVAICPPVPYYLAV 209
Query: 176 GGSDEYARVYDIRKCHW-----YSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-EL 229
G SD R+YD R Y+ + V F P HL K+ +T L YS E+
Sbjct: 210 GCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLSNKS-CRVTSLCYSEDGQEI 268
Query: 230 LISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREE 264
L+SY+ + +YLF+ + S E+ +REE
Sbjct: 269 LVSYSSDYIYLFDPKDDTARELKTPSAEE--RREE 301
Score = 236 (88.1 bits), Expect = 2.1e-52, Sum P(2) = 2.1e-52
Identities = 48/113 (42%), Positives = 73/113 (64%)
Query: 267 VYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 325
VY GHRNS+T +K NF+G N +VMSGSDCGH+FIW + + + L+ D HVVN L+P
Sbjct: 728 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQP 785
Query: 326 HPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLT 378
HP P+ A+ GI+ +K+W+P+ A++++ N+ E+ +R T+T
Sbjct: 786 HPFDPILASSGIDYDIKIWSPLEESRIFNRKLADEVITRNELMLEE-TRNTIT 837
>UNIPROTKB|E1C4X5 [details] [associations]
symbol:WDTC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0004857 "enzyme inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006006 "glucose metabolic
process" evidence=IEA] [GO:0008361 "regulation of cell size"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0045717
"negative regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0055082 "cellular chemical homeostasis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 GO:GO:0006006
GO:GO:0008361 GO:GO:0000122 GO:GO:0045717 Gene3D:1.25.40.10
GeneTree:ENSGT00530000062951 OMA:HRYCGHC GO:GO:0055082
EMBL:AADN02051275 IPI:IPI00603574 ProteinModelPortal:E1C4X5
PRIDE:E1C4X5 Ensembl:ENSGALT00000001392 NextBio:20822612
Uniprot:E1C4X5
Length = 671
Score = 327 (120.2 bits), Expect = 4.7e-52, Sum P(3) = 4.7e-52
Identities = 73/211 (34%), Positives = 109/211 (51%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
++R+ L +L GH GCVN +E+N GD L SGSDD+ I WD ++ S +GH NI
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY 120
F + +P + DR +IT +AD +V + + + G H RV ++A P P +
Sbjct: 94 FSVKFLPHSGDRILITGAADSKVHVHDLTV--KETIHMFGDHTNRVKRIATAPMWPNTFW 151
Query: 121 SCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE 180
S EDG ++ +DLR +S R +E Q + + ++P++ NY AVG S
Sbjct: 152 SAAEDGLIRQYDLRENSK-RSEVLIDLTEYCGQ---LVEAKCLTVNPQDNNYLAVGASGP 207
Query: 181 YARVYDIRKCHWYSPISSDTP---VDTFCPR 208
+ R+YDIR H + P V TFC R
Sbjct: 208 FVRLYDIRMIHNHRKSMKQCPSAGVHTFCDR 238
Score = 223 (83.6 bits), Expect = 4.7e-52, Sum P(3) = 4.7e-52
Identities = 58/167 (34%), Positives = 86/167 (51%)
Query: 253 SLSPEDLQKREEPQVYS----GHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG 307
S+S +++ RE Y GH N+ T +K NFFG N +Y++SGSD G FIW+K+
Sbjct: 505 SISEDEMVLRERSYDYKFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETT 564
Query: 308 KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQ 367
LVR++ GD +VN L+PHP AT GI+ V+LW P P + L N ++
Sbjct: 565 NLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRP-ESETL--NGRVVVDMEGA 621
Query: 368 GREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNAADFESDEEEGE 414
+ + R+ P +M +L + R T +D E D EG+
Sbjct: 622 SQANQRRMNADPLEVM-LLNMGYRIT-GLTSGGAGGSDDE-DSSEGQ 665
Score = 42 (19.8 bits), Expect = 4.7e-52, Sum P(3) = 4.7e-52
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 227 SELLISYNDELVYLFE 242
+ELL++ E VYLF+
Sbjct: 281 TELLVNMGGEQVYLFD 296
>RGD|1561961 [details] [associations]
symbol:Dcaf6 "DDB1 and CUL4 associated factor 6" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR000048
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50096
PROSITE:PS50294 SMART:SM00015 SMART:SM00320 RGD:1561961
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0045944
GO:GO:0030374 GO:GO:0080008 GeneTree:ENSGT00530000062951 CTD:55827
KO:K11795 OMA:QTEAIGP OrthoDB:EOG4KPT96 EMBL:CH473958
IPI:IPI00957421 RefSeq:XP_213926.5 Ensembl:ENSRNOT00000004199
GeneID:289181 KEGG:rno:289181 UCSC:RGD:1561961 NextBio:629337
Uniprot:D4A8L4
Length = 851
Score = 340 (124.7 bits), Expect = 6.3e-52, Sum P(2) = 6.3e-52
Identities = 93/275 (33%), Positives = 142/275 (51%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDD-KLVIFWDWKDRREKFSYLSGHLDN 59
++R+ L L+ H GCVN + +N TG++++SGSDD KLVI + R+ + SGH N
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYS-RKVLTTIRSGHRAN 96
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPYI 118
IF + +P TDD++I++ S DG + I +D + + + H G Y++ P PY
Sbjct: 97 IFSAKFLPCTDDKQIVSCSGDGVIFYTNIEQDAETNRQCQFTCHYGTTYEIMTVPNDPYT 156
Query: 119 IYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPM--NSIRL-NAIVIDPRNPNYFAV 175
SCGEDG V+ FD R ++ C+ E+ K + N R ++ I P P + AV
Sbjct: 157 FLSCGEDGTVRWFDTRIKTS-----CTK--EDCKDDILINCRRAATSVAICPPVPYHLAV 209
Query: 176 GGSDEYARVYDIRKCHW-----YSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-EL 229
G SD R+YD R Y+ + V F P HL K+ +T L YS E+
Sbjct: 210 GCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLSNKS-CRVTSLCYSEDGQEI 268
Query: 230 LISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREE 264
L+SY+ + +YLF+ + S E+ +REE
Sbjct: 269 LVSYSSDYIYLFDPKDDTARELKTPSAEE--RREE 301
Score = 236 (88.1 bits), Expect = 6.3e-52, Sum P(2) = 6.3e-52
Identities = 48/113 (42%), Positives = 73/113 (64%)
Query: 267 VYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 325
VY GHRNS+T +K NF+G N +VMSGSDCGH+FIW + + + L+ D HVVN L+P
Sbjct: 703 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQP 760
Query: 326 HPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLT 378
HP P+ A+ GI+ +K+W+P+ A++++ N+ E+ +R T+T
Sbjct: 761 HPFDPILASSGIDYDIKIWSPLEESRIFNRKLADEVITRNELMLEE-TRNTIT 812
>UNIPROTKB|F1MBJ1 [details] [associations]
symbol:DCAF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000048 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50096 PROSITE:PS50294
SMART:SM00015 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0045944 GO:GO:0030374 GO:GO:0080008
GeneTree:ENSGT00530000062951 CTD:55827 KO:K11795 OMA:QTEAIGP
EMBL:DAAA02006734 EMBL:DAAA02006728 EMBL:DAAA02006729
EMBL:DAAA02006730 EMBL:DAAA02006731 EMBL:DAAA02006732
EMBL:DAAA02006733 IPI:IPI00697106 RefSeq:NP_001178158.1
UniGene:Bt.92050 ProteinModelPortal:F1MBJ1
Ensembl:ENSBTAT00000027930 GeneID:524645 KEGG:bta:524645
NextBio:20874004 ArrayExpress:F1MBJ1 Uniprot:F1MBJ1
Length = 877
Score = 338 (124.0 bits), Expect = 7.2e-52, Sum P(2) = 7.2e-52
Identities = 92/275 (33%), Positives = 142/275 (51%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDD-KLVIFWDWKDRREKFSYLSGHLDN 59
++R+ L L+ H GCVN + +N TG++++SGSDD KLVI + R+ + SGH N
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNETGEYILSGSDDTKLVISNPYS-RKVLTTIRSGHRAN 96
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPYI 118
IF + +P T+D++I++ S DG + + +D + + + H G Y++ P PY
Sbjct: 97 IFSAKFLPCTNDKQIVSCSGDGVIFYTNVEQDAETNRQCQFTCHYGTTYEIMTVPNDPYT 156
Query: 119 IYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPM--NSIRL-NAIVIDPRNPNYFAV 175
SCGEDG V+ FD R ++ C+ E+ K + N R ++ I P P Y AV
Sbjct: 157 FLSCGEDGTVRWFDTRIKTS-----CTK--EDCKDDILINCRRAATSVAICPPIPYYLAV 209
Query: 176 GGSDEYARVYDIRKCHW-----YSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-EL 229
G SD R+YD R Y+ + V F P HL K+ +T L YS E+
Sbjct: 210 GCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNNKS-CRVTSLCYSEDGQEI 268
Query: 230 LISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREE 264
L+SY+ + +YLF+ + S E+ +REE
Sbjct: 269 LVSYSSDYIYLFDPKDDTARELKTPSAEE--RREE 301
Score = 238 (88.8 bits), Expect = 7.2e-52, Sum P(2) = 7.2e-52
Identities = 60/149 (40%), Positives = 86/149 (57%)
Query: 267 VYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 325
VY GHRNS+T +K NF+G N +VMSGSDCGH+FIW + + + L+ D HVVN L+P
Sbjct: 729 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQP 786
Query: 326 HPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLT-PDVIMH 384
HP P+ A+ GI+ +K+W+P+ A++++ N+ E+ +R T+T P M
Sbjct: 787 HPFDPILASSGIDYDIKIWSPLEESRIFNRKLADEVITRNELMLEE-TRNTITVPASFM- 844
Query: 385 VLRLQRRQTLAYRERRYNAADFESDEEEG 413
LR+ LA A ESD EG
Sbjct: 845 -LRM-----LASLNH-IRADRLESDRSEG 866
>UNIPROTKB|Q5R9B8 [details] [associations]
symbol:DCAF6 "DDB1- and CUL4-associated factor 6"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR000048
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50096 PROSITE:PS50294 SMART:SM00015 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0016567 GO:GO:0080008
CTD:55827 HOVERGEN:HBG054871 KO:K11795 EMBL:CR858414 EMBL:CR859471
EMBL:CR860637 RefSeq:NP_001125965.1 RefSeq:NP_001128877.1
UniGene:Pab.18994 ProteinModelPortal:Q5R9B8 GeneID:100172900
KEGG:pon:100172900 InParanoid:Q5R9B8 Uniprot:Q5R9B8
Length = 860
Score = 338 (124.0 bits), Expect = 1.1e-51, Sum P(2) = 1.1e-51
Identities = 92/275 (33%), Positives = 142/275 (51%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDD-KLVIFWDWKDRREKFSYLSGHLDN 59
++R+ L L+ H GCVN + +N TG++++SGSDD KLVI + R+ + SGH N
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYS-RKVLTTIRSGHRAN 96
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPYI 118
IF + +P T+D++I++ S DG + + +D + + + H G Y++ P PY
Sbjct: 97 IFSAKFLPCTNDKQIVSCSGDGVIFYTNVEQDAETNRQCQFTCHYGTTYEIMTVPNDPYT 156
Query: 119 IYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPM--NSIRL-NAIVIDPRNPNYFAV 175
SCGEDG V+ FD R ++ C+ E+ K + N R ++ I P P Y AV
Sbjct: 157 FLSCGEDGTVRWFDTRIKTS-----CTK--EDCKDDILINCRRAATSVAICPPIPYYLAV 209
Query: 176 GGSDEYARVYDIRKCHW-----YSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-EL 229
G SD R+YD R Y+ + V F P HL K+ +T L YS E+
Sbjct: 210 GCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNNKS-CRVTSLCYSEDGQEI 268
Query: 230 LISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREE 264
L+SY+ + +YLF+ + S E+ +REE
Sbjct: 269 LVSYSSDYIYLFDPKDDTARELKTPSAEE--RREE 301
Score = 236 (88.1 bits), Expect = 1.1e-51, Sum P(2) = 1.1e-51
Identities = 48/113 (42%), Positives = 73/113 (64%)
Query: 267 VYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 325
VY GHRNS+T +K NF+G N +VMSGSDCGH+FIW + + + L+ D HVVN L+P
Sbjct: 712 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQP 769
Query: 326 HPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLT 378
HP P+ A+ GI+ +K+W+P+ A++++ N+ E+ +R T+T
Sbjct: 770 HPFDPILASSGIDYDIKIWSPLEESRIFNRKLADEVITRNELMLEE-TRNTIT 821
Score = 39 (18.8 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 68 FTDDRKIITSSADG 81
FTD+R I SS+ G
Sbjct: 495 FTDERSSIASSSRG 508
>UNIPROTKB|Q58WW2 [details] [associations]
symbol:DCAF6 "DDB1- and CUL4-associated factor 6"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
InterPro:IPR017986 InterPro:IPR000048 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50096
PROSITE:PS50294 SMART:SM00015 SMART:SM00320 UniPathway:UPA00143
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0045944 EMBL:CH471067 GO:GO:0016567 EMBL:Z97876 GO:GO:0030374
GO:GO:0080008 EMBL:AY766164 EMBL:DQ768089 EMBL:AF116725
EMBL:AK297847 EMBL:AL031287 EMBL:AL033531 EMBL:AL033532
EMBL:BC025262 EMBL:AL136738 IPI:IPI00157836 IPI:IPI00164246
IPI:IPI00290516 IPI:IPI00910205 RefSeq:NP_001017977.1
RefSeq:NP_001185885.1 RefSeq:NP_001185886.1 RefSeq:NP_060912.2
UniGene:Hs.435741 PDB:3I7O PDBsum:3I7O ProteinModelPortal:Q58WW2
SMR:Q58WW2 DIP:DIP-44678N IntAct:Q58WW2 STRING:Q58WW2
PhosphoSite:Q58WW2 DMDM:74755134 PaxDb:Q58WW2 PRIDE:Q58WW2
DNASU:55827 Ensembl:ENST00000312263 Ensembl:ENST00000367840
Ensembl:ENST00000367843 Ensembl:ENST00000432587 GeneID:55827
KEGG:hsa:55827 UCSC:uc001gev.3 UCSC:uc001gew.3 UCSC:uc001gex.3
CTD:55827 GeneCards:GC01P167905 HGNC:HGNC:30002 HPA:HPA030852
MIM:610494 neXtProt:NX_Q58WW2 PharmGKB:PA165751150 eggNOG:NOG292060
HOGENOM:HOG000038027 HOVERGEN:HBG054871 KO:K11795 OMA:QTEAIGP
ChiTaRS:DCAF6 EvolutionaryTrace:Q58WW2 GenomeRNAi:55827
NextBio:61026 ArrayExpress:Q58WW2 Bgee:Q58WW2 CleanEx:HS_IQWD1
Genevestigator:Q58WW2 Uniprot:Q58WW2
Length = 860
Score = 338 (124.0 bits), Expect = 1.1e-51, Sum P(2) = 1.1e-51
Identities = 92/275 (33%), Positives = 142/275 (51%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDD-KLVIFWDWKDRREKFSYLSGHLDN 59
++R+ L L+ H GCVN + +N TG++++SGSDD KLVI + R+ + SGH N
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYS-RKVLTTIRSGHRAN 96
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPYI 118
IF + +P T+D++I++ S DG + + +D + + + H G Y++ P PY
Sbjct: 97 IFSAKFLPCTNDKQIVSCSGDGVIFYTNVEQDAETNRQCQFTCHYGTTYEIMTVPNDPYT 156
Query: 119 IYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPM--NSIRL-NAIVIDPRNPNYFAV 175
SCGEDG V+ FD R ++ C+ E+ K + N R ++ I P P Y AV
Sbjct: 157 FLSCGEDGTVRWFDTRIKTS-----CTK--EDCKDDILINCRRAATSVAICPPIPYYLAV 209
Query: 176 GGSDEYARVYDIRKCHW-----YSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-EL 229
G SD R+YD R Y+ + V F P HL K+ +T L YS E+
Sbjct: 210 GCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNNKS-CRVTSLCYSEDGQEI 268
Query: 230 LISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREE 264
L+SY+ + +YLF+ + S E+ +REE
Sbjct: 269 LVSYSSDYIYLFDPKDDTARELKTPSAEE--RREE 301
Score = 236 (88.1 bits), Expect = 1.1e-51, Sum P(2) = 1.1e-51
Identities = 48/113 (42%), Positives = 73/113 (64%)
Query: 267 VYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 325
VY GHRNS+T +K NF+G N +VMSGSDCGH+FIW + + + L+ D HVVN L+P
Sbjct: 712 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQP 769
Query: 326 HPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLT 378
HP P+ A+ GI+ +K+W+P+ A++++ N+ E+ +R T+T
Sbjct: 770 HPFDPILASSGIDYDIKIWSPLEESRIFNRKLADEVITRNELMLEE-TRNTIT 821
>UNIPROTKB|E2REY6 [details] [associations]
symbol:DCAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000048 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50096 PROSITE:PS50294
SMART:SM00015 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0045944 GO:GO:0030374 GO:GO:0080008
GeneTree:ENSGT00530000062951 CTD:55827 KO:K11795 OMA:QTEAIGP
EMBL:AAEX03005222 RefSeq:XP_537208.2 ProteinModelPortal:E2REY6
Ensembl:ENSCAFT00000024361 GeneID:480085 KEGG:cfa:480085
Uniprot:E2REY6
Length = 950
Score = 338 (124.0 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 92/275 (33%), Positives = 142/275 (51%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDD-KLVIFWDWKDRREKFSYLSGHLDN 59
++R+ L L+ H GCVN + +N TG++++SGSDD KLVI + R+ + SGH N
Sbjct: 38 IQRLKLEATLNVHDGCVNTICWNETGEYILSGSDDTKLVISNPYS-RKVLTTIRSGHRAN 96
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPYI 118
IF + +P T+D++I++ S DG + + +D + + + H G Y++ P PY
Sbjct: 97 IFSAKFLPCTNDKQIVSCSGDGVIFYTNVEQDAETNRQCQFTCHYGTTYEIMTVPNDPYT 156
Query: 119 IYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPM--NSIRL-NAIVIDPRNPNYFAV 175
SCGEDG V+ FD R ++ C+ E+ K + N R ++ I P P Y AV
Sbjct: 157 FLSCGEDGTVRWFDTRIKTS-----CTK--EDCKDDILINCRRAATSVAICPPIPYYLAV 209
Query: 176 GGSDEYARVYDIRKCHW-----YSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-EL 229
G SD R+YD R Y+ + V F P HL K+ +T L YS E+
Sbjct: 210 GCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNNKS-CRVTSLCYSEDGQEI 268
Query: 230 LISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREE 264
L+SY+ + +YLF+ + S E+ +REE
Sbjct: 269 LVSYSSDYIYLFDPKDDTARELKTPSAEE--RREE 301
Score = 236 (88.1 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 48/113 (42%), Positives = 73/113 (64%)
Query: 267 VYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 325
VY GHRNS+T +K NF+G N +VMSGSDCGH+FIW + + + L+ D HVVN L+P
Sbjct: 802 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQP 859
Query: 326 HPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLT 378
HP P+ A+ GI+ +K+W+P+ A++++ N+ E+ +R T+T
Sbjct: 860 HPFDPILASSGIDYDIKIWSPLEESRIFNRKLADEVITRNELMLEE-TRNTIT 911
>UNIPROTKB|F1NU19 [details] [associations]
symbol:F1NU19 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000048 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50096 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0045944 GO:GO:0030374 GO:GO:0080008
GeneTree:ENSGT00530000062951 OMA:QTEAIGP EMBL:AADN02032625
EMBL:AADN02032626 EMBL:AADN02042411 EMBL:AADN02042412
EMBL:AADN02042413 EMBL:AADN02042414 EMBL:AADN02042415
EMBL:AADN02042416 EMBL:AADN02042417 EMBL:AADN02032627
EMBL:AADN02032628 EMBL:AADN02032629 EMBL:AADN02032630
EMBL:AADN02032631 EMBL:AADN02032632 EMBL:AADN02032633
EMBL:AADN02032634 IPI:IPI00576626 Ensembl:ENSGALT00000024895
Uniprot:F1NU19
Length = 825
Score = 334 (122.6 bits), Expect = 2.5e-51, Sum P(2) = 2.5e-51
Identities = 88/274 (32%), Positives = 140/274 (51%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
++R+ L L+ H GCVN + +N TG++++SGSDD ++ + R+ + SGH NI
Sbjct: 5 IQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTNLVITNPYSRKVLTTIRSGHRANI 64
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPYII 119
F + +P T+D++I++ S DG + + +D + + + H G Y++ P PY
Sbjct: 65 FSAKFLPCTNDKQIVSCSGDGVIFYTNVEQDAETNRQCQYTCHYGTTYEIMTVPNDPYTF 124
Query: 120 YSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPM--NSIRL-NAIVIDPRNPNYFAVG 176
SCGEDG V+ FD R ++ C+ E+ K + N R ++ I P P Y AVG
Sbjct: 125 LSCGEDGTVRWFDTRIKTS-----CTK--EDCKDDILINCRRAATSVAICPPIPYYLAVG 177
Query: 177 GSDEYARVYDIRKCHW-----YSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-ELL 230
SD R+YD R Y+ + V F P HL K+ +T L YS E+L
Sbjct: 178 CSDSSVRIYDRRMLGTRATGNYAGRGTIGMVARFVPPHLNNKS-CRVTSLCYSEDGQEIL 236
Query: 231 ISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREE 264
+SY+ + +YLF+ L + P ++REE
Sbjct: 237 VSYSSDYIYLFDPKDDTARE-LKV-PSSEERREE 268
Score = 236 (88.1 bits), Expect = 2.5e-51, Sum P(2) = 2.5e-51
Identities = 48/113 (42%), Positives = 73/113 (64%)
Query: 267 VYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 325
VY GHRNS+T +K NF+G N +VMSGSDCGH+FIW + + + L+ D HVVN L+P
Sbjct: 677 VYKGHRNSRTMIKEANFWGSN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQP 734
Query: 326 HPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLT 378
HP P+ A+ GI+ +K+W+P+ A++++ N+ E+ +R T+T
Sbjct: 735 HPFDPILASSGIDYDIKIWSPLEESRIFNRKLADEVITRNELMLEE-TRNTIT 786
>UNIPROTKB|Q8N5D0 [details] [associations]
symbol:WDTC1 "WD and tetratricopeptide repeats protein 1"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006006 "glucose metabolic process" evidence=IEA] [GO:0008361
"regulation of cell size" evidence=IEA] [GO:0032869 "cellular
response to insulin stimulus" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=IEA] [GO:0055082 "cellular chemical
homeostasis" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 GO:GO:0043231 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0032869 EMBL:CH471059 GO:GO:0004857 eggNOG:COG2319
GO:GO:0001701 GO:GO:0006006 GO:GO:0008361 GO:GO:0000122
GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105
Pfam:PF07719 PDB:3I7N PDBsum:3I7N EMBL:AL663123 EMBL:AL590640
EMBL:AK001734 EMBL:BC032523 EMBL:AB028960 IPI:IPI00186384
IPI:IPI00398202 IPI:IPI00398203 IPI:IPI00398204 IPI:IPI00398205
IPI:IPI00398206 RefSeq:NP_055838.2 UniGene:Hs.469154
ProteinModelPortal:Q8N5D0 SMR:Q8N5D0 DIP:DIP-31627N IntAct:Q8N5D0
STRING:Q8N5D0 PhosphoSite:Q8N5D0 DMDM:41018470 PaxDb:Q8N5D0
PRIDE:Q8N5D0 DNASU:23038 Ensembl:ENST00000319394
Ensembl:ENST00000361771 Ensembl:ENST00000447062 GeneID:23038
KEGG:hsa:23038 UCSC:uc001bno.3 UCSC:uc001bnq.3 CTD:23038
GeneCards:GC01P027561 HGNC:HGNC:29175 HPA:HPA028177 HPA:HPA028180
HPA:HPA028182 neXtProt:NX_Q8N5D0 PharmGKB:PA134981539
HOGENOM:HOG000231334 HOVERGEN:HBG059105 InParanoid:Q8N5D0 KO:K11807
OMA:HRYCGHC OrthoDB:EOG4CRKZJ PhylomeDB:Q8N5D0 ChiTaRS:WDTC1
EvolutionaryTrace:Q8N5D0 GenomeRNAi:23038 NextBio:44050 Bgee:Q8N5D0
CleanEx:HS_WDTC1 Genevestigator:Q8N5D0 GermOnline:ENSG00000142784
GO:GO:0055082 Uniprot:Q8N5D0
Length = 677
Score = 315 (115.9 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 69/211 (32%), Positives = 108/211 (51%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
++R+ L +L GH GCVN +E+N GD L SGSDD+ I WD ++ S +GH NI
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY 120
F + +P DR +IT +AD +V + + + G H RV ++A P P +
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLTV--KETIHMFGDHTNRVKRIATAPMWPNTFW 151
Query: 121 SCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE 180
S EDG ++ +DLR +S + + ++ + + ++P++ N AVG S
Sbjct: 152 SAAEDGLIRQYDLRENSK----HSEVLIDLTEYCGQLVEAKCLTVNPQDNNCLAVGASGP 207
Query: 181 YARVYDIRKCHWYSPISSDTP---VDTFCPR 208
+ R+YDIR H + +P V TFC R
Sbjct: 208 FVRLYDIRMIHNHRKSMKQSPSAGVHTFCDR 238
Score = 228 (85.3 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 60/167 (35%), Positives = 87/167 (52%)
Query: 253 SLSPEDLQKREEPQVYS----GHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG 307
S+S +++ RE Y GH N+ T +K NFFG N +Y++SGSD G FIW+K+
Sbjct: 511 SISEDEMVLRERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETT 570
Query: 308 KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQ 367
LVR++ GD +VN L+PHP AT GI+ V+LW P P + L + M+ Q
Sbjct: 571 NLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRP-ESEDLTGRVVEDMEGASQ 629
Query: 368 GREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNAADFESDEEEGE 414
+ R+ P +M +L + R T A+D E D EG+
Sbjct: 630 ANQ--RRMNADPLEVM-LLNMGYRIT-GLSSGGAGASDDE-DSSEGQ 671
Score = 47 (21.6 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 219 TGLAYS-NTSELLISYNDELVYLFE 242
T + +S N +ELL++ E VYLF+
Sbjct: 272 TYVTFSPNGTELLVNMGGEQVYLFD 296
>UNIPROTKB|B6CVL4 [details] [associations]
symbol:WDTC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055082 "cellular chemical homeostasis" evidence=IEA]
[GO:0045717 "negative regulation of fatty acid biosynthetic
process" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IEA]
[GO:0008361 "regulation of cell size" evidence=IEA] [GO:0006006
"glucose metabolic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004857
"enzyme inhibitor activity" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 eggNOG:COG2319
GO:GO:0001701 GO:GO:0006006 GO:GO:0008361 GO:GO:0000122
GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00530000062951 CTD:23038
HOGENOM:HOG000231334 HOVERGEN:HBG059105 KO:K11807 OMA:HRYCGHC
OrthoDB:EOG4CRKZJ GO:GO:0055082 EMBL:CU466983 EMBL:FP067355
EMBL:EU559626 RefSeq:NP_001129436.1 UniGene:Ssc.11356
ProteinModelPortal:B6CVL4 STRING:B6CVL4 Ensembl:ENSSSCT00000003964
GeneID:100190994 KEGG:ssc:100190994 Uniprot:B6CVL4
Length = 678
Score = 315 (115.9 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 69/211 (32%), Positives = 108/211 (51%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
++R+ L +L GH GCVN +E+N GD L SGSDD+ I WD ++ S +GH NI
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY 120
F + +P DR +IT +AD +V + + + G H RV ++A P P +
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLTV--KETIHMFGDHTNRVKRIATAPMWPNTFW 151
Query: 121 SCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE 180
S EDG ++ +DLR +S + + ++ + + ++P++ N AVG S
Sbjct: 152 SAAEDGLIRQYDLRENSK----HSEVLIDLTEYCGQLVEAKCLTVNPQDNNCLAVGASGP 207
Query: 181 YARVYDIRKCHWYSPISSDTP---VDTFCPR 208
+ R+YDIR H + +P V TFC R
Sbjct: 208 FVRLYDIRMIHNHRKSMKQSPSAGVHTFCDR 238
Score = 228 (85.3 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 60/167 (35%), Positives = 87/167 (52%)
Query: 253 SLSPEDLQKREEPQVYS----GHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG 307
S+S +++ RE Y GH N+ T +K NFFG N +Y++SGSD G FIW+K+
Sbjct: 512 SISEDEMVLRERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETT 571
Query: 308 KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQ 367
LVR++ GD +VN L+PHP AT GI+ V+LW P P + L + M+ Q
Sbjct: 572 NLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRP-ESEDLTGRVVEDMEGASQ 630
Query: 368 GREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNAADFESDEEEGE 414
+ R+ P +M +L + R T A+D E D EG+
Sbjct: 631 ANQ--RRMNADPLEVM-LLNMGYRIT-GLSSGGAGASDDE-DSSEGQ 672
Score = 47 (21.6 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 219 TGLAYS-NTSELLISYNDELVYLFE 242
T + +S N +ELL++ E VYLF+
Sbjct: 272 TYVTFSPNGTELLVNMGGEQVYLFD 296
>UNIPROTKB|E2RA21 [details] [associations]
symbol:WDTC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055082 "cellular chemical homeostasis"
evidence=IEA] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008361 "regulation of cell size" evidence=IEA]
[GO:0006006 "glucose metabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 GO:GO:0001701
GO:GO:0006006 GO:GO:0008361 GO:GO:0000122 GO:GO:0045717
Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105 Pfam:PF07719
GeneTree:ENSGT00530000062951 OMA:HRYCGHC GO:GO:0055082
EMBL:AAEX03001717 ProteinModelPortal:E2RA21
Ensembl:ENSCAFT00000019377 Uniprot:E2RA21
Length = 679
Score = 315 (115.9 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 69/211 (32%), Positives = 108/211 (51%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
++R+ L +L GH GCVN +E+N GD L SGSDD+ I WD ++ S +GH NI
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY 120
F + +P DR +IT +AD +V + + + G H RV ++A P P +
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLTV--KETIHMFGDHTNRVKRIATAPMWPNTFW 151
Query: 121 SCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE 180
S EDG ++ +DLR +S + + ++ + + ++P++ N AVG S
Sbjct: 152 SAAEDGLIRQYDLRENSK----HSEVLIDLTEYCGQLVEAKCLTVNPQDNNCLAVGASGP 207
Query: 181 YARVYDIRKCHWYSPISSDTP---VDTFCPR 208
+ R+YDIR H + +P V TFC R
Sbjct: 208 FVRLYDIRMIHNHRKSMKQSPSAGVHTFCDR 238
Score = 228 (85.3 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 60/167 (35%), Positives = 87/167 (52%)
Query: 253 SLSPEDLQKREEPQVYS----GHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG 307
S+S +++ RE Y GH N+ T +K NFFG N +Y++SGSD G FIW+K+
Sbjct: 513 SISEDEMVLRERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETT 572
Query: 308 KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQ 367
LVR++ GD +VN L+PHP AT GI+ V+LW P P + L + M+ Q
Sbjct: 573 NLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRP-ESEDLTGRVVEDMEGASQ 631
Query: 368 GREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNAADFESDEEEGE 414
+ R+ P +M +L + R T A+D E D EG+
Sbjct: 632 ANQ--RRMNADPLEVM-LLNMGYRIT-GLSSGGAGASDDE-DSSEGQ 673
Score = 47 (21.6 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 219 TGLAYS-NTSELLISYNDELVYLFE 242
T + +S N +ELL++ E VYLF+
Sbjct: 272 TYVTFSPNGTELLVNMGGEQVYLFD 296
>RGD|1310362 [details] [associations]
symbol:Wdtc1 "WD and tetratricopeptide repeats 1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001701 "in utero embryonic development" evidence=IEA;ISO]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0006006 "glucose metabolic process"
evidence=IEA;ISO] [GO:0008361 "regulation of cell size"
evidence=IEA;ISO] [GO:0032869 "cellular response to insulin
stimulus" evidence=IEA;ISO] [GO:0035264 "multicellular organism
growth" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0043086 "negative regulation of catalytic
activity" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0045717 "negative regulation of fatty
acid biosynthetic process" evidence=IEA;ISO] [GO:0055082 "cellular
chemical homeostasis" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 RGD:1310362 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0032869
GO:GO:0004857 GO:GO:0001701 GO:GO:0006006 GO:GO:0008361
GO:GO:0000122 GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264
InterPro:IPR013105 Pfam:PF07719 GeneTree:ENSGT00530000062951
EMBL:CH473968 CTD:23038 KO:K11807 OMA:HRYCGHC OrthoDB:EOG4CRKZJ
GO:GO:0055082 IPI:IPI00366746 RefSeq:NP_001101378.1
UniGene:Rn.16646 Ensembl:ENSRNOT00000011311 GeneID:313020
KEGG:rno:313020 UCSC:RGD:1310362 NextBio:665469 Uniprot:D4A7Z0
Length = 676
Score = 316 (116.3 bits), Expect = 2.9e-48, Sum P(3) = 2.9e-48
Identities = 72/211 (34%), Positives = 108/211 (51%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
++R+ L +L GH GCVN +E+N GD L SGSDD+ I WD ++ S +GH NI
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY 120
F + +P DR +IT +AD +V + + + G H RV ++A P P +
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLTV--KETIHMFGDHTNRVKRIATAPMWPNTFW 151
Query: 121 SCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE 180
S EDG ++ +DLR +S +E PM + + ++P++ N AVG S
Sbjct: 152 SAAEDGLIRQYDLRENSKHSEVLID-LTEYCG-PM--VEAKCLTVNPQDNNCLAVGASGP 207
Query: 181 YARVYDIRKCHWYSPISSDTP---VDTFCPR 208
+ R+YDIR H + +P V TFC R
Sbjct: 208 FVRLYDIRMIHNHRKSMKQSPSAGVHTFCDR 238
Score = 222 (83.2 bits), Expect = 2.9e-48, Sum P(3) = 2.9e-48
Identities = 45/101 (44%), Positives = 62/101 (61%)
Query: 253 SLSPEDLQKREEPQVYS----GHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG 307
S+S +++ RE Y GH N+ T +K NFFG N +Y++SGSD G FIW+K+
Sbjct: 510 SISEDEMVLRERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETT 569
Query: 308 KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 348
LVR++ GD +VN L+PHP AT GI+ V+LW P P
Sbjct: 570 NLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRP 610
Score = 47 (21.6 bits), Expect = 2.9e-48, Sum P(3) = 2.9e-48
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 219 TGLAYS-NTSELLISYNDELVYLFE 242
T + +S N +ELL++ E VYLF+
Sbjct: 272 TYVTFSPNGTELLVNMGGEQVYLFD 296
>UNIPROTKB|Q5R448 [details] [associations]
symbol:DCAF8 "DDB1- and CUL4-associated factor 8"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0016567 GO:GO:0080008
CTD:50717 HOVERGEN:HBG053807 KO:K11804 EMBL:CR861411
RefSeq:NP_001127032.1 UniGene:Pab.18321 ProteinModelPortal:Q5R448
GeneID:100174058 KEGG:pon:100174058 InParanoid:Q5R448
Uniprot:Q5R448
Length = 597
Score = 481 (174.4 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 119/299 (39%), Positives = 168/299 (56%)
Query: 151 SKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHL 210
+K+ + L I ++P N + FAVGG D++ R+YD RK ++ + FCP HL
Sbjct: 325 TKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKI---DENENNGVLKKFCPHHL 381
Query: 211 I-GKNNIHITGLAYSNT-SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY 268
+ G++ +IT L YS+ +ELL SYNDE +YLF + G + KR Y
Sbjct: 382 VNGESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYV--------KR-----Y 428
Query: 269 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH-VVNQLEPHP 327
GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+W+K ++++ M GD+ VVN LEPHP
Sbjct: 429 KGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHP 488
Query: 328 HIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS--RITLTPD----V 381
H+P+ AT G++ VK+WAP L + ++K NK+ R++ S R L
Sbjct: 489 HLPVLATSGLDHDVKIWAPTAEASTELT-GLKDVIKKNKRERDEDSLHRTDLFDSHMLWF 547
Query: 382 IMHVLRLQRRQTLAYRERRYNAADFESDEEEGETYLLGFSDSDASSEGGGNQR-ECIIS 439
+MH LR QRR +RE A D +SDE S SD S E G R +C+ S
Sbjct: 548 LMHHLR-QRRHHRRWREPGVGATDADSDESP--------SSSDTSDEEEGPDRVQCMPS 597
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 97/248 (39%), Positives = 141/248 (56%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
++R L L GH GCVN + FN G +L SGSDD V+ WDW R+ + SGH N+
Sbjct: 180 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 239
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRM-DTKRLGKHQGRVYKLAVEPGSPYII 119
FQ + +P + D + + DGQVR+ ++ +TKR+ +H+G +KLA+EP SP
Sbjct: 240 FQAKFLPNSGDSTLAMRARDGQVRVAELSATQCCKNTKRVAQHKGASHKLALEPDSPCTF 299
Query: 120 YSCGEDGFVQHFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGS 178
S GED V DLR D A++L +K+ + L I ++P N + FAVGG
Sbjct: 300 LSAGEDAVVFTIDLRQDRPASKLVV-------TKEKEKKVGLYTIYVNPANTHQFAVGGR 352
Query: 179 DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYSNT-SELLISYNDE 236
D++ R+YD RK ++ + FCP HL+ G++ +IT L YS+ +ELL SYNDE
Sbjct: 353 DQFVRIYDQRKI---DENENNGVLKKFCPHHLVNGESKANITCLVYSHDGTELLASYNDE 409
Query: 237 LVYLFEKN 244
+YLF +
Sbjct: 410 DIYLFNSS 417
Score = 37 (18.1 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 117 YIIYSCGEDGFVQHFDLR 134
++ +CG FVQ F L+
Sbjct: 169 FVYEACGARVFVQRFRLQ 186
>MGI|MGI:2685541 [details] [associations]
symbol:Wdtc1 "WD and tetratricopeptide repeats 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0004857 "enzyme inhibitor activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006006 "glucose metabolic process" evidence=IMP] [GO:0008361
"regulation of cell size" evidence=IMP] [GO:0032869 "cellular
response to insulin stimulus" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042393 "histone
binding" evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0043086 "negative regulation of catalytic
activity" evidence=IDA] [GO:0045717 "negative regulation of fatty
acid biosynthetic process" evidence=IMP;IDA] [GO:0055082 "cellular
chemical homeostasis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2685541
GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0032869 GO:GO:0004857 eggNOG:COG2319
GO:GO:0001701 GO:GO:0006006 GO:GO:0008361 GO:GO:0000122
GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00530000062951 CTD:23038
HOGENOM:HOG000231334 HOVERGEN:HBG059105 KO:K11807 OMA:HRYCGHC
OrthoDB:EOG4CRKZJ ChiTaRS:WDTC1 GO:GO:0055082 EMBL:BC048824
EMBL:BC057107 IPI:IPI00108450 RefSeq:NP_955010.1 UniGene:Mm.226576
ProteinModelPortal:Q80ZK9 SMR:Q80ZK9 STRING:Q80ZK9
PhosphoSite:Q80ZK9 PaxDb:Q80ZK9 PRIDE:Q80ZK9
Ensembl:ENSMUST00000043305 GeneID:230796 KEGG:mmu:230796
InParanoid:Q80ZK9 NextBio:380168 Bgee:Q80ZK9 CleanEx:MM_WDTC1
Genevestigator:Q80ZK9 GermOnline:ENSMUSG00000037622 Uniprot:Q80ZK9
Length = 677
Score = 315 (115.9 bits), Expect = 6.7e-48, Sum P(3) = 6.7e-48
Identities = 72/211 (34%), Positives = 108/211 (51%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
++R+ L +L GH GCVN +E+N GD L SGSDD+ I WD ++ S +GH NI
Sbjct: 34 IRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANI 93
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY 120
F + +P DR +IT +AD +V + + + G H RV ++A P P +
Sbjct: 94 FSVKFLPHAGDRILITGAADSKVHVHDLTV--KETIHMFGDHTNRVKRIATAPMWPNTFW 151
Query: 121 SCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE 180
S EDG ++ +DLR +S +E PM + + ++P++ N AVG S
Sbjct: 152 SAAEDGLIRQYDLRENSKHSEVLID-LTEYCG-PM--VEAKCLTVNPQDNNCLAVGASGP 207
Query: 181 YARVYDIRKCHWYSPISSDTP---VDTFCPR 208
+ R+YDIR H + +P V TFC R
Sbjct: 208 FVRLYDIRMIHNHRKSMRQSPSAGVHTFCDR 238
Score = 222 (83.2 bits), Expect = 6.7e-48, Sum P(3) = 6.7e-48
Identities = 45/101 (44%), Positives = 62/101 (61%)
Query: 253 SLSPEDLQKREEPQVYS----GHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG 307
S+S +++ RE Y GH N+ T +K NFFG N +Y++SGSD G FIW+K+
Sbjct: 511 SISEDEMVLRERSYDYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETT 570
Query: 308 KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 348
LVR++ GD +VN L+PHP AT GI+ V+LW P P
Sbjct: 571 NLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRP 611
Score = 47 (21.6 bits), Expect = 6.7e-48, Sum P(3) = 6.7e-48
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 219 TGLAYS-NTSELLISYNDELVYLFE 242
T + +S N +ELL++ E VYLF+
Sbjct: 272 TYVTFSPNGTELLVNMGGEQVYLFD 296
>MGI|MGI:91860 [details] [associations]
symbol:Dcaf8 "DDB1 and CUL4 associated factor 8" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:91860 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567
GO:GO:0080008 GeneTree:ENSGT00530000062951 CTD:50717
HOVERGEN:HBG053807 KO:K11804 OrthoDB:EOG47H5PN ChiTaRS:DCAF8
EMBL:AK098114 EMBL:AK146825 EMBL:BC023704 EMBL:BC023804
IPI:IPI00229856 IPI:IPI00407739 RefSeq:NP_705783.1
UniGene:Mm.159915 ProteinModelPortal:Q8N7N5 SMR:Q8N7N5
PhosphoSite:Q8N7N5 PaxDb:Q8N7N5 PRIDE:Q8N7N5
Ensembl:ENSMUST00000074144 GeneID:98193 KEGG:mmu:98193
UCSC:uc007dpr.2 UCSC:uc007dps.2 HOGENOM:HOG000243561
InParanoid:Q8N7N5 OMA:EQPRRRV NextBio:353348 Bgee:Q8N7N5
CleanEx:MM_WDR42A Genevestigator:Q8N7N5 Uniprot:Q8N7N5
Length = 591
Score = 478 (173.3 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 120/299 (40%), Positives = 167/299 (55%)
Query: 151 SKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHL 210
+K+ + L I ++P N + FAVGG D+Y R+YD RK ++ + FCP HL
Sbjct: 319 TKEKEKKVGLYTIYVNPANTHQFAVGGRDQYVRIYDQRKI---DENENNGVLKKFCPHHL 375
Query: 211 IG-KNNIHITGLAYSNT-SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY 268
+ ++ +IT L YS+ +ELL SYNDE +YLF + G + KR Y
Sbjct: 376 VNSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYI--------KR-----Y 422
Query: 269 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH-VVNQLEPHP 327
GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+W+K ++++ M GD+ VVN LEPHP
Sbjct: 423 KGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHP 482
Query: 328 HIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGR-EDHSRITLTPD-----V 381
H+P+ AT G++ VK+WAP L ++++K NK+ R ED T D
Sbjct: 483 HLPVLATSGLDHDVKIWAPTAEASTELT-GLKEVIKKNKRERDEDSLHHTDLFDSHMLWF 541
Query: 382 IMHVLRLQRRQTLAYRERRYNAADFESDEEEGETYLLGFSDSDASSEGGGNQR-ECIIS 439
+MH LR QRR +RE A D +SDE S SD S E G R +C+ S
Sbjct: 542 LMHHLR-QRRHHRRWREPGVGATDADSDESP--------SSSDTSDEEEGPDRVQCMPS 591
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 97/248 (39%), Positives = 140/248 (56%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
++R L L GH GCVN + FN G +L SGSDD V+ WDW R+ + SGH N+
Sbjct: 174 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 233
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRM-DTKRLGKHQGRVYKLAVEPGSPYII 119
FQ + +P + D + + DGQVR+ ++ +TKR+ +H+G +KLA+EP SP
Sbjct: 234 FQAKFLPNSGDSTLAMCARDGQVRVAELSATQCCKNTKRVAQHKGASHKLALEPDSPCTF 293
Query: 120 YSCGEDGFVQHFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGS 178
S GED V DLR D A++L +K+ + L I ++P N + FAVGG
Sbjct: 294 LSAGEDAVVFTIDLRQDRPASKLVV-------TKEKEKKVGLYTIYVNPANTHQFAVGGR 346
Query: 179 DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG-KNNIHITGLAYSNT-SELLISYNDE 236
D+Y R+YD RK ++ + FCP HL+ ++ +IT L YS+ +ELL SYNDE
Sbjct: 347 DQYVRIYDQRKI---DENENNGVLKKFCPHHLVNSESKANITCLVYSHDGTELLASYNDE 403
Query: 237 LVYLFEKN 244
+YLF +
Sbjct: 404 DIYLFNSS 411
Score = 37 (18.1 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 117 YIIYSCGEDGFVQHFDLR 134
++ +CG FVQ F L+
Sbjct: 163 FVYEACGARVFVQRFRLQ 180
>RGD|1308513 [details] [associations]
symbol:Dcaf8 "DDB1 and CUL4 associated factor 8" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 RGD:1308513 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567
GO:GO:0080008 GeneTree:ENSGT00530000062951 CTD:50717
HOVERGEN:HBG053807 KO:K11804 OrthoDB:EOG47H5PN HOGENOM:HOG000243561
OMA:EQPRRRV EMBL:BC085957 IPI:IPI00192480 RefSeq:NP_001014253.1
UniGene:Rn.203073 ProteinModelPortal:Q5U2M6 PhosphoSite:Q5U2M6
PRIDE:Q5U2M6 Ensembl:ENSRNOT00000008944 GeneID:364050
KEGG:rno:364050 UCSC:RGD:1308513 InParanoid:Q5U2M6 NextBio:684737
Genevestigator:Q5U2M6 Uniprot:Q5U2M6
Length = 591
Score = 472 (171.2 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 119/299 (39%), Positives = 166/299 (55%)
Query: 151 SKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHL 210
+K+ + L I ++P N + FAVGG D++ R+YD RK ++ + FCP HL
Sbjct: 319 TKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKI---DENENNGVLKKFCPHHL 375
Query: 211 IG-KNNIHITGLAYSNT-SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY 268
+ ++ +IT L YS+ +ELL SYNDE +YLF + G + KR Y
Sbjct: 376 VNSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYI--------KR-----Y 422
Query: 269 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH-VVNQLEPHP 327
GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+W+K ++++ M GD+ VVN LEPHP
Sbjct: 423 KGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHP 482
Query: 328 HIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGR-EDHSRITLTPD-----V 381
H+P+ AT G++ VK+WAP L + ++K NK+ R ED T D
Sbjct: 483 HLPVLATSGLDHDVKIWAPTAEASTELT-GLKDVIKKNKRERDEDSLHHTDLFDSHMLWF 541
Query: 382 IMHVLRLQRRQTLAYRERRYNAADFESDEEEGETYLLGFSDSDASSEGGGNQR-ECIIS 439
+MH LR QRR +RE A D +SDE S SD S E G R +C+ S
Sbjct: 542 LMHHLR-QRRHHRRWREPGVGATDADSDESP--------SSSDTSDEEEGPDRVQCMPS 591
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 96/248 (38%), Positives = 140/248 (56%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
++R L L GH GCVN + FN G +L SGSDD V+ WDW R+ + SGH N+
Sbjct: 174 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 233
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRM-DTKRLGKHQGRVYKLAVEPGSPYII 119
FQ + +P + D + + DGQVR+ ++ +TKR+ +H+G +KLA+EP SP
Sbjct: 234 FQAKFLPNSGDSTLAMCARDGQVRVAELSATQCCKNTKRVAQHKGASHKLALEPDSPCTF 293
Query: 120 YSCGEDGFVQHFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGS 178
S GED V DLR D A++L +K+ + L I ++P N + FAVGG
Sbjct: 294 LSAGEDAVVFTIDLRQDRPASKLVV-------TKEKEKKVGLYTIYVNPANTHQFAVGGR 346
Query: 179 DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG-KNNIHITGLAYSNT-SELLISYNDE 236
D++ R+YD RK ++ + FCP HL+ ++ +IT L YS+ +ELL SYNDE
Sbjct: 347 DQFVRIYDQRKI---DENENNGVLKKFCPHHLVNSESKANITCLVYSHDGTELLASYNDE 403
Query: 237 LVYLFEKN 244
+YLF +
Sbjct: 404 DIYLFNSS 411
Score = 37 (18.1 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 117 YIIYSCGEDGFVQHFDLR 134
++ +CG FVQ F L+
Sbjct: 163 FVYEACGARVFVQRFRLQ 180
>UNIPROTKB|Q5TAQ9 [details] [associations]
symbol:DCAF8 "DDB1- and CUL4-associated factor 8"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567 EMBL:CH471121
GO:GO:0080008 EMBL:U06631 EMBL:AK223475 EMBL:CR749801 EMBL:AL139011
EMBL:BC013107 EMBL:BC080597 EMBL:BC098271 EMBL:BC099709
EMBL:BC099846 EMBL:BC111063 IPI:IPI00290071 IPI:IPI00854775
RefSeq:NP_056541.2 UniGene:Hs.632447 PDB:3I8E PDBsum:3I8E
ProteinModelPortal:Q5TAQ9 SMR:Q5TAQ9 DIP:DIP-48762N IntAct:Q5TAQ9
MINT:MINT-1446617 STRING:Q5TAQ9 PhosphoSite:Q5TAQ9 DMDM:74756455
PaxDb:Q5TAQ9 PRIDE:Q5TAQ9 Ensembl:ENST00000326837
Ensembl:ENST00000368073 Ensembl:ENST00000368074 GeneID:50717
KEGG:hsa:50717 UCSC:uc001fvn.2 UCSC:uc001fvp.4 CTD:50717
GeneCards:GC01M160185 H-InvDB:HIX0200230 HGNC:HGNC:24891
HPA:HPA027218 HPA:HPA027381 neXtProt:NX_Q5TAQ9 PharmGKB:PA165751195
HOVERGEN:HBG053807 InParanoid:Q5TAQ9 KO:K11804 OrthoDB:EOG47H5PN
PhylomeDB:Q5TAQ9 ChiTaRS:DCAF8 EvolutionaryTrace:Q5TAQ9
GenomeRNAi:50717 NextBio:53224 ArrayExpress:Q5TAQ9 Bgee:Q5TAQ9
CleanEx:HS_WDR42A Genevestigator:Q5TAQ9 Uniprot:Q5TAQ9
Length = 597
Score = 471 (170.9 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 117/299 (39%), Positives = 167/299 (55%)
Query: 151 SKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHL 210
+K+ + L I ++P N + FAVGG D++ R+YD RK ++ + FCP HL
Sbjct: 325 TKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKI---DENENNGVLKKFCPHHL 381
Query: 211 IG-KNNIHITGLAYSNT-SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY 268
+ ++ +IT L YS+ +ELL SYNDE +YLF + G + KR Y
Sbjct: 382 VNSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYV--------KR-----Y 428
Query: 269 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH-VVNQLEPHP 327
GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+W+K ++++ M GD+ VVN LEPHP
Sbjct: 429 KGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHP 488
Query: 328 HIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS--RITLTPD----V 381
H+P+ AT G++ VK+WAP L + ++K NK+ R++ S + L
Sbjct: 489 HLPVLATSGLDHDVKIWAPTAEASTELT-GLKDVIKKNKRERDEDSLHQTDLFDSHMLWF 547
Query: 382 IMHVLRLQRRQTLAYRERRYNAADFESDEEEGETYLLGFSDSDASSEGGGNQR-ECIIS 439
+MH LR QRR +RE A D +SDE S SD S E G R +C+ S
Sbjct: 548 LMHHLR-QRRHHRRWREPGVGATDADSDESP--------SSSDTSDEEEGPDRVQCMPS 597
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 96/248 (38%), Positives = 140/248 (56%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
++R L L GH GCVN + FN G +L SGSDD V+ WDW R+ + SGH N+
Sbjct: 180 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 239
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRM-DTKRLGKHQGRVYKLAVEPGSPYII 119
FQ + +P + D + + DGQVR+ ++ +TKR+ +H+G +KLA+EP SP
Sbjct: 240 FQAKFLPNSGDSTLAMCARDGQVRVAELSATQCCKNTKRVAQHKGASHKLALEPDSPCTF 299
Query: 120 YSCGEDGFVQHFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGS 178
S GED V DLR D A++L +K+ + L I ++P N + FAVGG
Sbjct: 300 LSAGEDAVVFTIDLRQDRPASKLVV-------TKEKEKKVGLYTIYVNPANTHQFAVGGR 352
Query: 179 DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG-KNNIHITGLAYSNT-SELLISYNDE 236
D++ R+YD RK ++ + FCP HL+ ++ +IT L YS+ +ELL SYNDE
Sbjct: 353 DQFVRIYDQRKI---DENENNGVLKKFCPHHLVNSESKANITCLVYSHDGTELLASYNDE 409
Query: 237 LVYLFEKN 244
+YLF +
Sbjct: 410 DIYLFNSS 417
Score = 37 (18.1 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 117 YIIYSCGEDGFVQHFDLR 134
++ +CG FVQ F L+
Sbjct: 169 FVYEACGARVFVQRFRLQ 186
>UNIPROTKB|G3V3G9 [details] [associations]
symbol:DCAF8 "DDB1- and CUL4-associated factor 8"
species:9606 "Homo sapiens" [GO:0005777 "peroxisome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006708
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04614 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AL139011 HGNC:HGNC:24891 ChiTaRS:DCAF8
OMA:EQPRRRV Ensembl:ENST00000555195 Ensembl:ENST00000556710
Uniprot:G3V3G9
Length = 751
Score = 471 (170.9 bits), Expect = 7.5e-46, Sum P(2) = 7.5e-46
Identities = 117/299 (39%), Positives = 167/299 (55%)
Query: 151 SKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHL 210
+K+ + L I ++P N + FAVGG D++ R+YD RK ++ + FCP HL
Sbjct: 479 TKEKEKKVGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKI---DENENNGVLKKFCPHHL 535
Query: 211 IG-KNNIHITGLAYSNT-SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY 268
+ ++ +IT L YS+ +ELL SYNDE +YLF + G + KR Y
Sbjct: 536 VNSESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYV--------KR-----Y 582
Query: 269 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH-VVNQLEPHP 327
GHRN+ TVKGVNF+GP E+V+SGSDCGH+F+W+K ++++ M GD+ VVN LEPHP
Sbjct: 583 KGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHP 642
Query: 328 HIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS--RITLTPD----V 381
H+P+ AT G++ VK+WAP L + ++K NK+ R++ S + L
Sbjct: 643 HLPVLATSGLDHDVKIWAPTAEASTELT-GLKDVIKKNKRERDEDSLHQTDLFDSHMLWF 701
Query: 382 IMHVLRLQRRQTLAYRERRYNAADFESDEEEGETYLLGFSDSDASSEGGGNQR-ECIIS 439
+MH LR QRR +RE A D +SDE S SD S E G R +C+ S
Sbjct: 702 LMHHLR-QRRHHRRWREPGVGATDADSDESP--------SSSDTSDEEEGPDRVQCMPS 751
Score = 433 (157.5 bits), Expect = 4.7e-40, P = 4.7e-40
Identities = 96/248 (38%), Positives = 140/248 (56%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
++R L L GH GCVN + FN G +L SGSDD V+ WDW R+ + SGH N+
Sbjct: 334 VQRFRLQHGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNV 393
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRM-DTKRLGKHQGRVYKLAVEPGSPYII 119
FQ + +P + D + + DGQVR+ ++ +TKR+ +H+G +KLA+EP SP
Sbjct: 394 FQAKFLPNSGDSTLAMCARDGQVRVAELSATQCCKNTKRVAQHKGASHKLALEPDSPCTF 453
Query: 120 YSCGEDGFVQHFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGS 178
S GED V DLR D A++L +K+ + L I ++P N + FAVGG
Sbjct: 454 LSAGEDAVVFTIDLRQDRPASKLVV-------TKEKEKKVGLYTIYVNPANTHQFAVGGR 506
Query: 179 DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG-KNNIHITGLAYSNT-SELLISYNDE 236
D++ R+YD RK ++ + FCP HL+ ++ +IT L YS+ +ELL SYNDE
Sbjct: 507 DQFVRIYDQRKI---DENENNGVLKKFCPHHLVNSESKANITCLVYSHDGTELLASYNDE 563
Query: 237 LVYLFEKN 244
+YLF +
Sbjct: 564 DIYLFNSS 571
Score = 37 (18.1 bits), Expect = 7.5e-46, Sum P(2) = 7.5e-46
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 117 YIIYSCGEDGFVQHFDLR 134
++ +CG FVQ F L+
Sbjct: 323 FVYEACGARVFVQRFRLQ 340
>POMBASE|SPBC609.03 [details] [associations]
symbol:iqw1 "WD repeat protein, Iqw1" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC609.03 GO:GO:0005829 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:NOG292060 KO:K11795
PIR:T40574 RefSeq:NP_596313.1 ProteinModelPortal:O94527
EnsemblFungi:SPBC609.03.1 GeneID:2541121 KEGG:spo:SPBC609.03
OMA:GHITACK OrthoDB:EOG4T4H3G NextBio:20802234 Uniprot:O94527
Length = 809
Score = 264 (98.0 bits), Expect = 3.9e-40, Sum P(2) = 3.9e-40
Identities = 65/198 (32%), Positives = 110/198 (55%)
Query: 4 INLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD-WKDRREKFSYLSGHLDNIFQ 62
I+L +L GH GCVN +++++ G+FL+SGSDD +I WD + + + + +GH+ NIF
Sbjct: 35 IDLQKELTGHTGCVNTLDWSADGEFLLSGSDDTRLIVWDVFNEYKPRHLISTGHVQNIFS 94
Query: 63 TRIMPFTDDRKIITSSADGQVRLGQI--FEDGRMDTKRLGKHQGRVYKLAVE------P- 113
+ +P++++R+I+++S D ++L + ++G MD + Q R + A++ P
Sbjct: 95 AKFVPYSNNRQILSASGDKLIKLFDLDSSKEGGMDHGM--ETQTRCWSCALDSVKNIVPC 152
Query: 114 --GSPYIIYSCGEDGFVQHFDLRSDSATRL-FYCSSFSENSKQPMNSIRLNAIVIDPRNP 170
G +++ C EDG + +D+R C S N P I L I + P NP
Sbjct: 153 DNGHTFLV--CSEDGTARQYDIREPHVCNQDLDCPSILVNYN-PYR-INLYTITMSPSNP 208
Query: 171 NYFAVGGSDEYARVYDIR 188
YFA+GG+ YA +YD R
Sbjct: 209 YYFAIGGTHPYAFLYDRR 226
Score = 237 (88.5 bits), Expect = 3.9e-40, Sum P(2) = 3.9e-40
Identities = 59/153 (38%), Positives = 83/153 (54%)
Query: 248 GPSPLSLSPEDLQKREEPQV--------YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHL 299
GP+ LSL + +K EP V Y GH N +++K VNF+G NDEYVMSGSD G
Sbjct: 637 GPTLLSLRMKK-RKAVEPNVPVNTHVKSYYGHCNVESIKNVNFYGQNDEYVMSGSDDGRF 695
Query: 300 FIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPL----- 354
FIW K ++ ++ GD VN +E HP P A GI+ TVK++ T PP
Sbjct: 696 FIWDKLNASILAIIHGDSEAVNVIEGHPRCPTLAVSGIDSTVKIFNTENT--PPSGCSRN 753
Query: 355 -PDNAEKIMKANKQGREDHSRIT-LTPDVIMHV 385
N+ KI+ N+ R+ SR + +T ++ H+
Sbjct: 754 HTSNSYKIIATNEMNRQQGSRDSYITSRMLSHL 786
Score = 146 (56.5 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 51/164 (31%), Positives = 72/164 (43%)
Query: 114 GSPYIIYSCGEDGFVQHFDLRSDSATRL-FYCSSFSENSKQPMNSIRLNAIVIDPRNPNY 172
G +++ C EDG + +D+R C S N P I L I + P NP Y
Sbjct: 155 GHTFLV--CSEDGTARQYDIREPHVCNQDLDCPSILVNYN-PYR-INLYTITMSPSNPYY 210
Query: 173 FAVGGSDEYARVYD---IRKCH---WY---SPISSDTPVDTFCPRHLIGKNNI---HITG 220
FA+GG+ YA +YD ++K W SP V F P I +IT
Sbjct: 211 FAIGGTHPYAFLYDRRMVKKSFRDDWTMNTSPEKDCRCVRKFSPDGSCNSQGILDRYITC 270
Query: 221 LAYS--NTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKR 262
+S N +ELL+S+N + VYLF + +P ED K+
Sbjct: 271 CQFSAANPNELLVSWNSDYVYLFHVHEDKSYTPTFNKIEDSNKK 314
Score = 65 (27.9 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 39/182 (21%), Positives = 72/182 (39%)
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYI-IYSCGEDGFV 128
D +++ S D ++ + +F + + H ++ P S I S D +
Sbjct: 56 DGEFLLSGSDDTRLIVWDVFNEYKPRHLISTGHVQNIFSAKFVPYSNNRQILSASGDKLI 115
Query: 129 QHFDLRSDSATRLFYCSSFSENSKQ-PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDI 187
+ FDL S + + ++S++ N + D N + F V D AR YDI
Sbjct: 116 KLFDLDSSKEGGMDHGMETQTRCWSCALDSVK-NIVPCD--NGHTFLVCSEDGTARQYDI 172
Query: 188 RKCHWYSPISSDTPVDTFCPRHLIGKN----NIHITGLAYSNTSELLISYNDELVYLFEK 243
R+ H + + D CP L+ N N++ ++ SN I +L+++
Sbjct: 173 REPH----VCNQ---DLDCPSILVNYNPYRINLYTITMSPSNPYYFAIGGTHPYAFLYDR 225
Query: 244 NM 245
M
Sbjct: 226 RM 227
Score = 43 (20.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 154 PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVY 185
P N R N ++ DP P+ E R +
Sbjct: 485 PTNVARQNFVLCDPDEPSRVLFSNPSEMIRAF 516
Score = 39 (18.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 405 DFESDEEEGETYLLGFSDSDASSE 428
D + D ++ E+Y D D S E
Sbjct: 609 DDDDDYQDEESYSYASDDDDESDE 632
>FB|FBgn0000057 [details] [associations]
symbol:adp "adipose" species:7227 "Drosophila melanogaster"
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006629 "lipid metabolic process" evidence=IMP;TAS] [GO:0009269
"response to desiccation" evidence=IMP] [GO:0010891 "negative
regulation of sequestering of triglyceride" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0010883 "regulation of lipid
storage" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR015943
InterPro:IPR019734 Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00028 SMART:SM00320
EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005975 GO:GO:0006629 GO:GO:0010891
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0009269
GeneTree:ENSGT00530000062951 KO:K11807 OMA:HRYCGHC EMBL:BT133245
EMBL:AJ556168 RefSeq:NP_611296.2 UniGene:Dm.681 SMR:Q7K7W5
STRING:Q7K7W5 EnsemblMetazoa:FBtr0086744 GeneID:37073
KEGG:dme:Dmel_CG5124 UCSC:CG5124-RA CTD:37073 FlyBase:FBgn0000057
InParanoid:Q7K7W5 OrthoDB:EOG4280GR GenomeRNAi:37073 NextBio:801825
Uniprot:Q7K7W5
Length = 628
Score = 281 (104.0 bits), Expect = 3.7e-37, Sum P(2) = 3.7e-37
Identities = 87/277 (31%), Positives = 130/277 (46%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYL--SGHLDNIFQTRIMP 67
L GH+GCVN +E+ + G +L SGSDD V+ WD R+K ++ + HL N+F + +P
Sbjct: 63 LVGHEGCVNCLEWTTDGMWLASGSDDYRVMIWD--PFRKKLVHVIRTKHLGNVFSVKFLP 120
Query: 68 FTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGF 127
T++ + T +AD + + I D H R +LA SP++ +S GEDG
Sbjct: 121 KTNNSIVATCAADKFIYVYDI-NDPNETLFSCICHFSRAKRLATAQDSPHVFWSAGEDGC 179
Query: 128 VQHFDLRSDSATRLFYCSSFSE-NSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYD 186
+ D+R R N + + + I+PR Y AVG +D +ARVYD
Sbjct: 180 ILQLDIREPHRCRPEEGIGVRLLNLHDQLENTEAKCLAINPRRTEYLAVGTNDPFARVYD 239
Query: 187 IRKCHWYSPISSDTPVDTFCPRHL---IGKNNIH----ITGLAYS-NTSELLISYNDELV 238
RK + V + P + I +N +H IT L ++ N +ELL++ E V
Sbjct: 240 RRKLPSTNGNGLSACVAYYAPGQIVKNISRNIVHEPRGITYLTFNGNGTELLVNIGCEHV 299
Query: 239 YLFEKNMGLGPS--PLSLSPEDLQKREEPQVYSGHRN 273
Y F+ N P L L EEP V HR+
Sbjct: 300 YRFDLNHAEPPVFYDLPAFTSTLVHEEEP-VKMPHRS 335
Score = 184 (69.8 bits), Expect = 3.7e-37, Sum P(2) = 3.7e-37
Identities = 36/110 (32%), Positives = 60/110 (54%)
Query: 262 REEPQVYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVV 320
R+ Q Y GH N T +K N+ G E++ +GSD G+++IW+ GK+ + D +V
Sbjct: 500 RDYMQRYVGHCNVTTDIKEANYLGSQGEFIAAGSDDGNMYIWEGDTGKIRAVYRADSAIV 559
Query: 321 NQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGRE 370
N ++PHP I M AT GI+ +K+W+P P+ + + + +E
Sbjct: 560 NCVQPHPSICMLATSGIDHNIKIWSPCAASAEERPNLVADVTRFVEDNQE 609
Score = 38 (18.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 133 LRSDSATRLFYCSSFSENSKQPMNSIRLN 161
+ SD R+ Y SS + P+N+ L+
Sbjct: 1 MSSDELYRVKYSSSRYQRQHTPLNASSLH 29
>TAIR|locus:2183735 [details] [associations]
symbol:ASG2 "AT5G10940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0009506
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 Gene3D:1.25.40.10 GO:GO:0080008 KO:K11807
OMA:HRYCGHC eggNOG:NOG288984 EMBL:AY039964 EMBL:AY150424
IPI:IPI00539536 RefSeq:NP_568242.1 UniGene:At.22156
ProteinModelPortal:Q94BQ3 SMR:Q94BQ3 IntAct:Q94BQ3 PaxDb:Q94BQ3
PRIDE:Q94BQ3 EnsemblPlants:AT5G10940.1 GeneID:830961
KEGG:ath:AT5G10940 TAIR:At5g10940 HOGENOM:HOG000239804
InParanoid:Q94BQ3 PhylomeDB:Q94BQ3 ProtClustDB:CLSN2689594
ArrayExpress:Q94BQ3 Genevestigator:Q94BQ3 Uniprot:Q94BQ3
Length = 757
Score = 259 (96.2 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 54/146 (36%), Positives = 87/146 (59%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
++R++ +L GH+GCVNA+ +NS G L+SGSDD + W++ R+ S +GH NI
Sbjct: 37 VRRLSQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANI 96
Query: 61 FQTRIMPFTDDRKIITSSADGQVRL-------GQIFEDGRMDTKRLGK-HQGRVYKLAVE 112
F T+ +P T D +++ + D +VRL G+ +D + L + H RV KLAVE
Sbjct: 97 FCTKFVPETSDELVVSGAGDAEVRLFNTSRLSGRAEDDNAIIPSALYQCHTRRVKKLAVE 156
Query: 113 PGSPYIIYSCGEDGFVQHFDLRSDSA 138
PG+P +++S EDG ++ D R ++
Sbjct: 157 PGNPNVVWSASEDGTLRQHDFRESTS 182
Score = 212 (79.7 bits), Expect = 7.4e-31, Sum P(2) = 7.4e-31
Identities = 60/180 (33%), Positives = 90/180 (50%)
Query: 102 HQGRVYKLAVEPGSPYIIYSCGEDGFVQHFDLRSDSA-----TRLFYCSS----FSENSK 152
H RV KLAVEPG+P +++S EDG ++ D R ++ T C S +K
Sbjct: 146 HTRRVKKLAVEPGNPNVVWSASEDGTLRQHDFRESTSCPPAGTAHQECRSVLLDLRSGAK 205
Query: 153 Q-----PMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTP----VD 203
+ P ++ L + I P+ VGGSD +AR+YD R + P V+
Sbjct: 206 RALADPPKQTLSLKSCDISATRPHLLLVGGSDAFARLYDRRMLPPLASSRKRMPPPPCVN 265
Query: 204 TFCPRHLI--GKNNIHITGLAYS-NTSELLISYNDELVYLFEKNMGL-GPSPLSLSPEDL 259
FCP HL G+ N+H+T + +S N E+L+SY+ E VYL N G+ + +P D+
Sbjct: 266 YFCPMHLSERGRTNLHLTHVTFSPNGEEVLLSYSGEHVYLMNVNNGICSTGIMQYTPGDV 325
Score = 206 (77.6 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 51/149 (34%), Positives = 84/149 (56%)
Query: 253 SLSPE---DLQKREEPQVYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK 308
S PE D+++R Y GH N T +K +F G EY+ SGSD G FIW+K+ G+
Sbjct: 600 SYQPEGAIDMKRR-----YVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGR 654
Query: 309 LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAP---MPT-----DFPPLPDNAEK 360
L++++VGD V+N ++ HP + AT GI+ T+K+W+P +P+ P N +
Sbjct: 655 LMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWSPTASVPSIVAGGSAGPATANVVE 714
Query: 361 IMKANKQGREDHSRITLTPDVIMHVLRLQ 389
+M++N+Q + L+ + +M R+Q
Sbjct: 715 VMESNQQKLSRNRENPLSVE-LMQRFRMQ 742
Score = 41 (19.5 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 218 ITGLAYSNTSELLISYNDEL 237
+ LA+++ LLIS +D+L
Sbjct: 53 VNALAWNSNGSLLISGSDDL 72
>ASPGD|ASPL0000058488 [details] [associations]
symbol:AN0287 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:BN001308 OMA:GHITACK
EnsemblFungi:CADANIAT00002433 Uniprot:C8VUB4
Length = 1089
Score = 241 (89.9 bits), Expect = 6.3e-36, Sum P(5) = 6.3e-36
Identities = 44/81 (54%), Positives = 59/81 (72%)
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 325
+VY GH N +TVK NFFG NDEYV+SGSD GHLFIW++ KLV ++ GD VVN ++
Sbjct: 913 RVYRGHCNVKTVKDANFFGLNDEYVVSGSDSGHLFIWERDTCKLVNILKGDDEVVNVVQG 972
Query: 326 HPHIPMFATCGIEKTVKLWAP 346
HP+ P A GI+ T+K+++P
Sbjct: 973 HPYEPTIAASGIDDTIKIFSP 993
Score = 143 (55.4 bits), Expect = 6.3e-36, Sum P(5) = 6.3e-36
Identities = 31/91 (34%), Positives = 52/91 (57%)
Query: 4 INLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWK--DRREKF----SYLSGHL 57
+++ +L GH GCVNA+ ++ +G L SGSDD + + ++ F S +GH
Sbjct: 36 LDIVNELGGHTGCVNALSWSRSGRLLASGSDDFHLNIYSYQPDSSTAPFALNTSVFTGHT 95
Query: 58 DNIFQTRIMPFTDDRKIITSSADGQVRLGQI 88
NIF MP ++D+ ++T++ D QVR+ I
Sbjct: 96 GNIFSVAFMPHSNDQTLVTAAGDSQVRVFDI 126
Score = 81 (33.6 bits), Expect = 6.3e-36, Sum P(5) = 6.3e-36
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 92 GRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHFDLRSDSA 138
G + + H RV ++ E SPY+ +C EDG V+ +DLR S+
Sbjct: 164 GNTNARIYRSHADRVKRIVTE-SSPYLFLTCSEDGEVRQWDLRLPSS 209
Score = 61 (26.5 bits), Expect = 6.3e-36, Sum P(5) = 6.3e-36
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 217 HITGLAYSNTS--ELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS 274
HIT SN + E+++S++ + +Y F+ L SP +LS ++ Q + Q S R S
Sbjct: 329 HITACKISNANPNEMIVSWSGDHIYSFD----LVRSPDALSTQEQQSSVQGQSSSRKRRS 384
Score = 58 (25.5 bits), Expect = 6.3e-36, Sum P(5) = 6.3e-36
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 158 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
I LN I P P+Y A+GG+ + ++D R
Sbjct: 246 IDLNTISCSPSQPHYIALGGAHLHCFLHDRR 276
Score = 38 (18.4 bits), Expect = 1.6e-20, Sum P(4) = 1.6e-20
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 56 HLDNIFQTRIMPFTDDRKIITSSADGQVR 84
H D + RI+ + +T S DG+VR
Sbjct: 174 HADRV--KRIVTESSPYLFLTCSEDGEVR 200
>DICTYBASE|DDB_G0269686 [details] [associations]
symbol:DDB_G0269686 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269686 EMBL:AAFI02000005 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K11795 RefSeq:XP_646188.1
ProteinModelPortal:Q55DE3 EnsemblProtists:DDB0238180 GeneID:8617141
KEGG:ddi:DDB_G0269686 OMA:ECVNSIN ProtClustDB:CLSZ2729295
Uniprot:Q55DE3
Length = 895
Score = 233 (87.1 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 45/88 (51%), Positives = 60/88 (68%)
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG-DRHVVNQLE 324
QVYSGH + QT+K VNF+GPN EY++SGSD LFIW K+ K+VR++ G D HV N +
Sbjct: 771 QVYSGHVSEQTIKSVNFYGPNSEYIVSGSDDSKLFIWDKESAKIVRILEGHDSHV-NSVV 829
Query: 325 PHPHIPMFATCGIEKTVKLWAPMPTDFP 352
HP+ P AT GI+ + LW P ++P
Sbjct: 830 CHPNEPCIATSGIDPYICLWEPTK-EYP 856
Score = 213 (80.0 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 47/126 (37%), Positives = 69/126 (54%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPF 68
+LHGH CVN++ FN G +VSG DD+ V WD +R+ + L GH N+F T +
Sbjct: 42 ELHGHNECVNSINFNDDGSLIVSGGDDETVRIWD-VGKRKCLTTLYGHSTNVFATNFLN- 99
Query: 69 TDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
D+RK+I+ D +R I E+ + + H +V KL+V P P + S DG V
Sbjct: 100 NDNRKVISGGNDADIRYYDI-ENQKCTVYK--HHSKKVLKLSVCPTQPQVFLSSSSDGSV 156
Query: 129 QHFDLR 134
+ FD+R
Sbjct: 157 RLFDVR 162
Score = 75 (31.5 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 27/122 (22%), Positives = 51/122 (41%)
Query: 68 FTDDRKIITSSADGQ-VRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDG 126
F DD +I S D + VR+ + + + T L H V+ + S G D
Sbjct: 55 FNDDGSLIVSGGDDETVRIWDVGKRKCLTT--LYGHSTNVFATNFLNNDNRKVISGGNDA 112
Query: 127 FVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYD 186
++++D+ + C+ + +SK+ + + + P P F SD R++D
Sbjct: 113 DIRYYDIENQK------CTVYKHHSKKVLK------LSVCPTQPQVFLSSSSDGSVRLFD 160
Query: 187 IR 188
+R
Sbjct: 161 VR 162
Score = 63 (27.2 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 35 DKLVIFWDWKDRREKFSY-LSGHLDNIFQTRIMPFTDDRKIITSSADGQVRL 85
+ L+I +D R F Y +S IF PF D IT+S+DG VRL
Sbjct: 246 NSLLINFDPLPLRRSFRYSISIPKTTIFSVEYHPF-DGYSFITASSDGTVRL 296
Score = 58 (25.5 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 173 FAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYS-NTSELLI 231
F SD R++D R +S S++ V+ + + + TG A+S N +E+++
Sbjct: 285 FITASSDGTVRLFDQRMIPNHS---SESFVNIYRNIEVPFPSEDEATGCAFSKNGNEIVV 341
Query: 232 SYNDELVYLFE 242
+Y ++ +YL++
Sbjct: 342 TYLNDNIYLYD 352
Score = 48 (22.0 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 176 GGSDEYARVYDI--RKC 190
GG DE R++D+ RKC
Sbjct: 65 GGDDETVRIWDVGKRKC 81
Score = 40 (19.1 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 18/86 (20%), Positives = 34/86 (39%)
Query: 106 VYKLAVEPGSPYIIYSCGEDGFVQHFDLRS--DSATRLFYCSSFSENSKQPMNSIRLNAI 163
++ + P Y + DG V+ FD R + ++ F + N + P S
Sbjct: 272 IFSVEYHPFDGYSFITASSDGTVRLFDQRMIPNHSSESFV--NIYRNIEVPFPSEDEATG 329
Query: 164 VIDPRNPNYFAVGGSDEYARVYDIRK 189
+N N V ++ +YD++K
Sbjct: 330 CAFSKNGNEIVVTYLNDNIYLYDLKK 355
Score = 39 (18.8 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 17/77 (22%), Positives = 32/77 (41%)
Query: 359 EKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNAADFESDEEEGETYLL 418
EK K+ K +E+ + I D + + Q E + E +EEE E L
Sbjct: 587 EKDYKSTKDDKEEENGIN---DSENEKIEKEEEQEEQEGEEEEEEEEEEEEEEEEEEELE 643
Query: 419 GFSDSDASSEGGGNQRE 435
+D+++ ++ N +
Sbjct: 644 --NDNNSENDNVANYED 658
>WB|WBGene00044440 [details] [associations]
symbol:adpr-1 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0019915 Gene3D:1.25.40.10
EMBL:FO081821 GeneTree:ENSGT00530000062951 KO:K11807 OMA:HRYCGHC
RefSeq:NP_001021829.1 UniGene:Cel.29679 ProteinModelPortal:Q4W5Q8
SMR:Q4W5Q8 PaxDb:Q4W5Q8 EnsemblMetazoa:Y73E7A.9 GeneID:3565128
KEGG:cel:CELE_Y73E7A.9 UCSC:Y73E7A.9 CTD:3565128 WormBase:Y73E7A.9
eggNOG:NOG288984 HOGENOM:HOG000022238 InParanoid:Q4W5Q8
NextBio:955287 Uniprot:Q4W5Q8
Length = 558
Score = 223 (83.6 bits), Expect = 4.8e-33, Sum P(2) = 4.8e-33
Identities = 50/136 (36%), Positives = 76/136 (55%)
Query: 217 HITGLAYSNTSELLISY-NDELVYLFEKNM-GLGPS--PLSLSPEDLQKREEPQVYSGHR 272
HI GLA + Y ND + E+++ L P+ P ++PE + +E Y G
Sbjct: 378 HI-GLARKCVQKFKEWYPNDTAIEKMEEDVEALTPNDRPELVAPEGVVDYQER--YGGST 434
Query: 273 NSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPM 331
N QT +K NFFG D+Y+++GSDCGH++IW + K+ + D H++N +PHP M
Sbjct: 435 NHQTDIKEANFFGSRDQYIIAGSDCGHMYIWNRDTSKIQGIFEADDHILNICQPHPDQFM 494
Query: 332 FATCGIEKTVKLWAPM 347
AT GI+ + LW P+
Sbjct: 495 IATAGIDDDILLWQPI 510
Score = 210 (79.0 bits), Expect = 4.8e-33, Sum P(2) = 4.8e-33
Identities = 56/196 (28%), Positives = 94/196 (47%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH GCVN + +N TG L SGSDD+ V W K RE + ++GH N+F + +
Sbjct: 37 LEGHSGCVNTLRWNKTGALLASGSDDRNVKIW--KSGREIHNLVTGHEGNVFAVEFLQNS 94
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGE-DGFV 128
D+K++T +AD V L I T + + GRV ++ P + ++ E D V
Sbjct: 95 GDQKLVTGAADRVVALHDI----EASTCKKWELDGRVKRICTVEHDPTLFWAAVECDNGV 150
Query: 129 QHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
Q FD R+++ + + + + + ++ + PN VG + R+YD R
Sbjct: 151 QQFDTRTENPEVII-----RHTADREFHDAK--SVAVSEARPNLIVVGFDETAVRLYDRR 203
Query: 189 KCH----WYSPISSDT 200
+ +SP+ ++T
Sbjct: 204 NLNAPMLTFSPLGANT 219
>ZFIN|ZDB-GENE-060929-808 [details] [associations]
symbol:dcaf5 "ddb1 and cul4 associated factor 5"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-060929-808 Gene3D:2.130.10.10 SUPFAM:SSF50978
CTD:8816 KO:K11800 GeneTree:ENSGT00530000062951 EMBL:CR361558
EMBL:CABZ01003772 EMBL:CABZ01003773 EMBL:FP103009 EMBL:BC124494
IPI:IPI00503404 RefSeq:NP_001071020.1 UniGene:Dr.83785
Ensembl:ENSDART00000084867 GeneID:560257 KEGG:dre:560257
HOGENOM:HOG000205845 HOVERGEN:HBG095204 InParanoid:Q08BZ1
NextBio:20883350 Uniprot:Q08BZ1
Length = 789
Score = 191 (72.3 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 65/199 (32%), Positives = 95/199 (47%)
Query: 2 KRINLCGKLH-----GHKGCVNAVEF-NSTGDFLVSGSDDKLVIFWDWKDR---REKFSY 52
+R++ C L+ GH GCVNA+EF N+ G +LVSG DD+ V+ W + R K
Sbjct: 34 RRLSGCSSLYKKDMLGHFGCVNAIEFSNNGGQWLVSGGDDRRVLLWHMEKAIHSRAKPMK 93
Query: 53 LSG-HLDNIFQTRIMPF-TDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLA 110
L G HL NIF + F + ++++ + D QV L + E G +T + H VY L+
Sbjct: 94 LKGEHLSNIF---CLAFDSTNKRVFSGGNDEQVILHDV-ERG--ETLNVFLHDDAVYGLS 147
Query: 111 VEPGSPYIIYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNP 170
V P + + S +DG V +D R F C + N +S+ N P P
Sbjct: 148 VSPVNDNVFASSSDDGRVLIWDTREPPHGEPF-CLA---NYPSAFHSVMFN-----PVEP 198
Query: 171 NYFAVGGSDEYARVYDIRK 189
A S E ++DIRK
Sbjct: 199 RLLATANSKEGVGLWDIRK 217
Score = 150 (57.9 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWK-----KKGG--KLVR--LMV--GDRH 318
G+ NS T+K F G D+Y++SGSD +L++W+ + GG ++V MV G R
Sbjct: 273 GYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWRIPTDPEAGGAGRVVNGAFMVLKGHRS 332
Query: 319 VVNQLEPHPHIPMFATCGIEKTVKLWAP 346
+VNQ+ +PH M + G+EK +K+W+P
Sbjct: 333 IVNQVRFNPHTYMICSSGVEKVIKVWSP 360
Score = 101 (40.6 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 39/155 (25%), Positives = 67/155 (43%)
Query: 9 KLHG-HKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMP 67
KL G H + + F+ST + SG +D+ VI D +R E + H D ++ + P
Sbjct: 93 KLKGEHLSNIFCLAFDSTNKRVFSGGNDEQVILHD-VERGETLNVFL-HDDAVYGLSVSP 150
Query: 68 FTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGF 127
+D +SS DG+V + E + L + + + P P ++ +
Sbjct: 151 -VNDNVFASSSDDGRVLIWDTREPPHGEPFCLANYPSAFHSVMFNPVEPRLLATANSKEG 209
Query: 128 VQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNA 162
V +D+R ++ L Y S S S S+R N+
Sbjct: 210 VGLWDIRKPRSSLLRYGGSLSLQSAM---SVRFNS 241
>UNIPROTKB|G3V6K4 [details] [associations]
symbol:Dcaf5 "Protein Dcaf5" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1306535 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:CH473947
CTD:8816 KO:K11800 OMA:YIGEDNY GeneTree:ENSGT00530000062951
RefSeq:NP_001094188.1 UniGene:Rn.47944 ProteinModelPortal:G3V6K4
Ensembl:ENSRNOT00000006005 GeneID:314273 KEGG:rno:314273
NextBio:667391 Uniprot:G3V6K4
Length = 946
Score = 186 (70.5 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 65/192 (33%), Positives = 89/192 (46%)
Query: 5 NLCGK-LHGHKGCVNAVEF-NSTGDFLVSGSDDKLVIFWDWKDR---REKFSYLSG-HLD 58
NL K L GH GCVNA+EF N+ G +LVSG DD+ V+ W + R K L G H
Sbjct: 43 NLYKKDLLGHFGCVNAIEFSNNGGQWLVSGGDDRRVLLWHMEQAIHSRVKPIQLKGEHHS 102
Query: 59 NIFQTRIMPFTD-DRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPY 117
NIF + F + K+ + D QV L + +D + H+ VY L+V P +
Sbjct: 103 NIF---CLAFNSGNTKVFSGGNDEQVILHDVESSETLD---VFAHEDAVYGLSVSPVNDN 156
Query: 118 IIYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG 177
I S +DG V +D+R F C + N +S+ N P P A
Sbjct: 157 IFASSSDDGRVLIWDIRESPHGEPF-CLA---NYPSAFHSVMFN-----PVEPRLLATAN 207
Query: 178 SDEYARVYDIRK 189
S E ++DIRK
Sbjct: 208 SKEGVGLWDIRK 219
Score = 153 (58.9 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWK-----KKGG--KLVR--LMV--GDRH 318
G+ NS T+K F G D+Y++SGSD +L++WK + GG ++V MV G R
Sbjct: 275 GYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWKVPADPEAGGLGRVVNGAFMVLKGHRS 334
Query: 319 VVNQLEPHPHIPMFATCGIEKTVKLWAP 346
+VNQ+ +PH M + G+EK +K+W+P
Sbjct: 335 IVNQVRFNPHTYMICSSGVEKIIKIWSP 362
Score = 104 (41.7 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 40/162 (24%), Positives = 70/162 (43%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
+K I L G+ H + C+ FNS + SG +D+ VI D + E + H D +
Sbjct: 91 VKPIQLKGEHHSNIFCL---AFNSGNTKVFSGGNDEQVILHD-VESSETLDVFA-HEDAV 145
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY 120
+ + P +D +SS DG+V + I E + L + + + P P ++
Sbjct: 146 YGLSVSP-VNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHSVMFNPVEPRLLA 204
Query: 121 SCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNA 162
+ V +D+R ++ L Y + S S S+R N+
Sbjct: 205 TANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAM---SVRFNS 243
Score = 44 (20.5 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 20/73 (27%), Positives = 29/73 (39%)
Query: 345 APMPTDFPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLA----YRER 399
A +P PP D +A+ S + TP R+Q L+ Y+++
Sbjct: 463 ASLPRSPPPTVDESADNAFHLGPLRVTTTSAVVSTPATPTCEDAASRQQRLSALRRYQDK 522
Query: 400 RYNAADFESDEEE 412
R A ESD EE
Sbjct: 523 RLLALSNESDSEE 535
Score = 44 (20.5 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 221 LAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPED 258
LA SN S+ ++E V E + L P P S SPED
Sbjct: 525 LALSNESD-----SEENVCEAELDTDLFPRPRSPSPED 557
>MGI|MGI:2444785 [details] [associations]
symbol:Dcaf5 "DDB1 and CUL4 associated factor 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:2444785 GO:GO:0005739
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0016567 GO:GO:0080008 CTD:8816 HOGENOM:HOG000060080
HOVERGEN:HBG057544 KO:K11800 OMA:YIGEDNY OrthoDB:EOG44MXRG
EMBL:AK122561 EMBL:BC030857 EMBL:BC042567 EMBL:BC046813
EMBL:AK034653 EMBL:AK077889 IPI:IPI00340504 RefSeq:NP_796241.3
UniGene:Mm.220310 UniGene:Mm.447547 ProteinModelPortal:Q80T85
SMR:Q80T85 STRING:Q80T85 PhosphoSite:Q80T85 PaxDb:Q80T85
PRIDE:Q80T85 Ensembl:ENSMUST00000054145 GeneID:320808
KEGG:mmu:320808 GeneTree:ENSGT00530000062951 InParanoid:Q80T85
NextBio:397479 Bgee:Q80T85 CleanEx:MM_WDR22 Genevestigator:Q80T85
GermOnline:ENSMUSG00000049106 Uniprot:Q80T85
Length = 946
Score = 186 (70.5 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 65/192 (33%), Positives = 89/192 (46%)
Query: 5 NLCGK-LHGHKGCVNAVEF-NSTGDFLVSGSDDKLVIFWDWKDR---REKFSYLSG-HLD 58
NL K L GH GCVNA+EF N+ G +LVSG DD+ V+ W + R K L G H
Sbjct: 43 NLYKKDLLGHFGCVNAIEFSNNGGQWLVSGGDDRRVLLWHMEQAIHSRVKPIQLKGEHHS 102
Query: 59 NIFQTRIMPFTD-DRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPY 117
NIF + F + K+ + D QV L + +D + H+ VY L+V P +
Sbjct: 103 NIF---CLAFNSGNTKVFSGGNDEQVILHDVESSETLD---VFAHEDAVYGLSVSPVNDN 156
Query: 118 IIYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG 177
I S +DG V +D+R F C + N +S+ N P P A
Sbjct: 157 IFASSSDDGRVLIWDIRESPHGEPF-CLA---NYPSAFHSVMFN-----PVEPRLLATAN 207
Query: 178 SDEYARVYDIRK 189
S E ++DIRK
Sbjct: 208 SKEGVGLWDIRK 219
Score = 153 (58.9 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWK-----KKGG--KLVR--LMV--GDRH 318
G+ NS T+K F G D+Y++SGSD +L++WK + GG ++V MV G R
Sbjct: 275 GYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWKIPADPEAGGIGRVVNGAFMVLKGHRS 334
Query: 319 VVNQLEPHPHIPMFATCGIEKTVKLWAP 346
+VNQ+ +PH M + G+EK +K+W+P
Sbjct: 335 IVNQVRFNPHTYMICSSGVEKIIKIWSP 362
Score = 104 (41.7 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 40/162 (24%), Positives = 70/162 (43%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
+K I L G+ H + C+ FNS + SG +D+ VI D + E + H D +
Sbjct: 91 VKPIQLKGEHHSNIFCL---AFNSGNTKVFSGGNDEQVILHD-VESSETLDVFA-HEDAV 145
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY 120
+ + P +D +SS DG+V + I E + L + + + P P ++
Sbjct: 146 YGLSVSP-VNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHSVMFNPVEPRLLA 204
Query: 121 SCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNA 162
+ V +D+R ++ L Y + S S S+R N+
Sbjct: 205 TANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAM---SVRFNS 243
Score = 44 (20.5 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 221 LAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPED 258
LA SN S+ ++E V E + L P P S SPED
Sbjct: 525 LALSNESD-----SEENVCEAELDTDLFPRPRSPSPED 557
Score = 43 (20.2 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 387 RLQRRQTLA-YRERRYNAADFESDEEE 412
R QR L Y+++R A ESD EE
Sbjct: 509 RQQRLSALRRYQDKRLLALSNESDSEE 535
>UNIPROTKB|Q96JK2 [details] [associations]
symbol:DCAF5 "DDB1- and CUL4-associated factor 5"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA;IC]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005739 EMBL:CH471061 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567
GO:GO:0080008 EMBL:AB058727 EMBL:AL831932 EMBL:AL831823
EMBL:BC136632 EMBL:AF044774 IPI:IPI00382979 IPI:IPI00783277
RefSeq:NP_003852.1 UniGene:Hs.509780 PDB:3I89 PDBsum:3I89
ProteinModelPortal:Q96JK2 SMR:Q96JK2 DIP:DIP-48763N IntAct:Q96JK2
STRING:Q96JK2 PhosphoSite:Q96JK2 DMDM:47606200 PaxDb:Q96JK2
PRIDE:Q96JK2 Ensembl:ENST00000341516 Ensembl:ENST00000554215
Ensembl:ENST00000556847 GeneID:8816 KEGG:hsa:8816 UCSC:uc001xkp.3
CTD:8816 GeneCards:GC14M069517 HGNC:HGNC:20224 MIM:603812
neXtProt:NX_Q96JK2 PharmGKB:PA165478844 HOGENOM:HOG000060080
HOVERGEN:HBG057544 InParanoid:Q96JK2 KO:K11800 OMA:YIGEDNY
OrthoDB:EOG44MXRG ChiTaRS:DCAF5 EvolutionaryTrace:Q96JK2
GenomeRNAi:8816 NextBio:33070 ArrayExpress:Q96JK2 Bgee:Q96JK2
CleanEx:HS_WDR22 Genevestigator:Q96JK2 GermOnline:ENSG00000139990
Uniprot:Q96JK2
Length = 942
Score = 186 (70.5 bits), Expect = 7.7e-22, Sum P(3) = 7.7e-22
Identities = 65/192 (33%), Positives = 89/192 (46%)
Query: 5 NLCGK-LHGHKGCVNAVEF-NSTGDFLVSGSDDKLVIFWDWKDR---REKFSYLSG-HLD 58
NL K L GH GCVNA+EF N+ G +LVSG DD+ V+ W + R K L G H
Sbjct: 43 NLYKKDLLGHFGCVNAIEFSNNGGQWLVSGGDDRRVLLWHMEQAIHSRVKPIQLKGEHHS 102
Query: 59 NIFQTRIMPFTD-DRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPY 117
NIF + F + K+ + D QV L + +D + H+ VY L+V P +
Sbjct: 103 NIF---CLAFNSGNTKVFSGGNDEQVILHDVESSETLD---VFAHEDAVYGLSVSPVNDN 156
Query: 118 IIYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG 177
I S +DG V +D+R F C + N +S+ N P P A
Sbjct: 157 IFASSSDDGRVLIWDIRESPHGEPF-CLA---NYPSAFHSVMFN-----PVEPRLLATAN 207
Query: 178 SDEYARVYDIRK 189
S E ++DIRK
Sbjct: 208 SKEGVGLWDIRK 219
Score = 150 (57.9 bits), Expect = 7.7e-22, Sum P(3) = 7.7e-22
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWK-----KKGG--KLVR--LMV--GDRH 318
G+ NS T+K F G D+Y++SGSD +L++W+ + GG ++V MV G R
Sbjct: 275 GYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWRIPADPEAGGIGRVVNGAFMVLKGHRS 334
Query: 319 VVNQLEPHPHIPMFATCGIEKTVKLWAP 346
+VNQ+ +PH M + G+EK +K+W+P
Sbjct: 335 IVNQVRFNPHTYMICSSGVEKIIKIWSP 362
Score = 104 (41.7 bits), Expect = 4.6e-13, Sum P(3) = 4.6e-13
Identities = 40/162 (24%), Positives = 70/162 (43%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
+K I L G+ H + C+ FNS + SG +D+ VI D + E + H D +
Sbjct: 91 VKPIQLKGEHHSNIFCL---AFNSGNTKVFSGGNDEQVILHD-VESSETLDVFA-HEDAV 145
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY 120
+ + P +D +SS DG+V + I E + L + + + P P ++
Sbjct: 146 YGLSVSP-VNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHSVMFNPVEPRLLA 204
Query: 121 SCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNA 162
+ V +D+R ++ L Y + S S S+R N+
Sbjct: 205 TANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAM---SVRFNS 243
Score = 45 (20.9 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 221 LAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPED 258
LA SN S+ ++E V E + L P P S SPED
Sbjct: 525 LALSNESD-----SEENVCEVELDTDLFPRPRSPSPED 557
Score = 43 (20.2 bits), Expect = 7.7e-22, Sum P(3) = 7.7e-22
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 387 RLQRRQTLA-YRERRYNAADFESDEEE 412
R QR L Y+++R A ESD EE
Sbjct: 509 RQQRLSALRRYQDKRLLALSNESDSEE 535
Score = 43 (20.2 bits), Expect = 7.7e-22, Sum P(3) = 7.7e-22
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 388 LQRRQTLAYRERRYNAADFESDEEEGETYLL-GFSD 422
++R+ AY+ RY+ + S+ ++GET L+ G +D
Sbjct: 656 VERKIYKAYKWLRYSYISY-SNNKDGETSLVTGEAD 690
>UNIPROTKB|E2QXZ3 [details] [associations]
symbol:DCAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0080008
CTD:8816 KO:K11800 OMA:YIGEDNY GeneTree:ENSGT00530000062951
EMBL:AAEX03005804 EMBL:AAEX03005805 EMBL:AAEX03005806
RefSeq:XP_547871.3 Ensembl:ENSCAFT00000026219 GeneID:490749
KEGG:cfa:490749 Uniprot:E2QXZ3
Length = 947
Score = 186 (70.5 bits), Expect = 7.9e-22, Sum P(3) = 7.9e-22
Identities = 65/192 (33%), Positives = 89/192 (46%)
Query: 5 NLCGK-LHGHKGCVNAVEF-NSTGDFLVSGSDDKLVIFWDWKDR---REKFSYLSG-HLD 58
NL K L GH GCVNA+EF N+ G +LVSG DD+ V+ W + R K L G H
Sbjct: 43 NLYKKDLLGHFGCVNAIEFSNNGGQWLVSGGDDRRVLLWHMEQAIHSRVKPIQLKGEHHS 102
Query: 59 NIFQTRIMPFTD-DRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPY 117
NIF + F + K+ + D QV L + +D + H+ VY L+V P +
Sbjct: 103 NIF---CLAFNSGNTKVFSGGNDEQVILHDVESSETLD---VFAHEDAVYGLSVSPVNDN 156
Query: 118 IIYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGG 177
I S +DG V +D+R F C + N +S+ N P P A
Sbjct: 157 IFASSSDDGRVLIWDIRESPHGEPF-CLA---NYPSAFHSVMFN-----PVEPRLLATAN 207
Query: 178 SDEYARVYDIRK 189
S E ++DIRK
Sbjct: 208 SKEGVGLWDIRK 219
Score = 150 (57.9 bits), Expect = 7.9e-22, Sum P(3) = 7.9e-22
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWK-----KKGG--KLVR--LMV--GDRH 318
G+ NS T+K F G D+Y++SGSD +L++W+ + GG ++V MV G R
Sbjct: 275 GYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWRIPADPEAGGIGRVVNGAFMVLKGHRS 334
Query: 319 VVNQLEPHPHIPMFATCGIEKTVKLWAP 346
+VNQ+ +PH M + G+EK +K+W+P
Sbjct: 335 IVNQVRFNPHTYMICSSGVEKIIKIWSP 362
Score = 104 (41.7 bits), Expect = 4.7e-13, Sum P(3) = 4.7e-13
Identities = 40/162 (24%), Positives = 70/162 (43%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
+K I L G+ H + C+ FNS + SG +D+ VI D + E + H D +
Sbjct: 91 VKPIQLKGEHHSNIFCL---AFNSGNTKVFSGGNDEQVILHD-VESSETLDVFA-HEDAV 145
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY 120
+ + P +D +SS DG+V + I E + L + + + P P ++
Sbjct: 146 YGLSVSP-VNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHSVMFNPVEPRLLA 204
Query: 121 SCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNA 162
+ V +D+R ++ L Y + S S S+R N+
Sbjct: 205 TANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAM---SVRFNS 243
Score = 43 (20.2 bits), Expect = 7.9e-22, Sum P(3) = 7.9e-22
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 387 RLQRRQTLA-YRERRYNAADFESDEEE 412
R QR L Y+++R A ESD EE
Sbjct: 509 RQQRLSALRRYQDKRLLALSNESDSEE 535
Score = 42 (19.8 bits), Expect = 1.0e-21, Sum P(3) = 1.0e-21
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 388 LQRRQTLAYRERRYNAADFESDEEEGETYLLGFSDSDASSEG 429
++R+ AY+ RY+ + S+ ++GE+ L+ ++D G
Sbjct: 656 VERKIYKAYKWLRYSYISY-SNNKDGESSLMS-GEADEGRAG 695
Score = 41 (19.5 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 221 LAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPED 258
LA SN S+ ++E E + L P P S SPED
Sbjct: 525 LALSNESD-----SEENACEVELDTDLFPRPRSPSPED 557
>UNIPROTKB|F1N0J7 [details] [associations]
symbol:DCAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0080008
OMA:YIGEDNY GeneTree:ENSGT00530000062951 EMBL:DAAA02029489
IPI:IPI00687521 Ensembl:ENSBTAT00000028279 Uniprot:F1N0J7
Length = 876
Score = 150 (57.9 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWK-----KKGG--KLVR--LMV--GDRH 318
G+ NS T+K F G D+Y++SGSD +L++W+ + GG ++V MV G R
Sbjct: 204 GYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWRIPADPEAGGIGRVVNGAFMVLKGHRS 263
Query: 319 VVNQLEPHPHIPMFATCGIEKTVKLWAP 346
+VNQ+ +PH M + G+EK +K+W+P
Sbjct: 264 IVNQVRFNPHTYMICSSGVEKIIKIWSP 291
Score = 114 (45.2 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 47/163 (28%), Positives = 68/163 (41%)
Query: 32 GSDDKLVIFWDWKDR---REKFSYLSG-HLDNIFQTRIMPFTD-DRKIITSSADGQVRLG 86
G DD+ V+ W + R K L G H NIF + F + K+ + D QV L
Sbjct: 1 GGDDRRVLLWHMEQAIHSRVKPIQLKGEHHSNIF---CLAFNSGNTKVFSGGNDEQVILH 57
Query: 87 QIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHFDLRSDSATRLFYCSS 146
+ +D + H+ VY L+V P + I S +DG V +D+R F C +
Sbjct: 58 DVESSETLD---VFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPF-CLA 113
Query: 147 FSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRK 189
N +S+ N P P A S E ++DIRK
Sbjct: 114 ---NYPSAFHSVMFN-----PVEPRLLATANSKEGVGLWDIRK 148
Score = 104 (41.7 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 40/162 (24%), Positives = 70/162 (43%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
+K I L G+ H + C+ FNS + SG +D+ VI D + E + H D +
Sbjct: 20 VKPIQLKGEHHSNIFCL---AFNSGNTKVFSGGNDEQVILHD-VESSETLDVFA-HEDAV 74
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY 120
+ + P +D +SS DG+V + I E + L + + + P P ++
Sbjct: 75 YGLSVSP-VNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAFHSVMFNPVEPRLLA 133
Query: 121 SCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNA 162
+ V +D+R ++ L Y + S S S+R N+
Sbjct: 134 TANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAM---SVRFNS 172
Score = 43 (20.2 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 387 RLQRRQTLA-YRERRYNAADFESDEEE 412
R QR L Y+++R A ESD EE
Sbjct: 438 RQQRLSALRRYQDKRLLALSNESDSEE 464
Score = 41 (19.5 bits), Expect = 5.4e-14, Sum P(3) = 5.4e-14
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 388 LQRRQTLAYRERRYNAADFESDEEEGETYLLGFSDSDASSEG 429
++R+ AY+ RY+ + S+ ++GE+ L+ ++D G
Sbjct: 585 VERKIYKAYKWLRYSYISY-SNNKDGESSLVS-GEADEGRAG 624
>UNIPROTKB|F1NXD8 [details] [associations]
symbol:DCAF5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0080008
OMA:YIGEDNY GeneTree:ENSGT00530000062951 EMBL:AADN02003166
IPI:IPI00585055 Ensembl:ENSGALT00000015407 Uniprot:F1NXD8
Length = 871
Score = 150 (57.9 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWK-----KKGG--KLVR--LMV--GDRH 318
G+ NS T+K F G D+Y++SGSD +L++W+ + GG ++V MV G R
Sbjct: 204 GYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWRIPPDPEAGGIGRVVNGAFMVLKGHRS 263
Query: 319 VVNQLEPHPHIPMFATCGIEKTVKLWAP 346
+VNQ+ +PH M + G+EK +K+W+P
Sbjct: 264 IVNQVRFNPHTYMICSSGVEKIIKIWSP 291
Score = 114 (45.2 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 44/163 (26%), Positives = 72/163 (44%)
Query: 32 GSDDKLVIFWDWKDR---REKFSYLSG-HLDNIFQTRIMPFTD-DRKIITSSADGQVRLG 86
G DD+ V+ W ++ R K L G H NIF + F + K+ + D QV L
Sbjct: 1 GGDDRRVLLWHMEEAIHSRVKPVQLKGEHHSNIF---CLAFNSGNTKVFSGGNDEQVILH 57
Query: 87 QIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHFDLRSDSATRLFYCSS 146
+ +D + H+ VY L+V P + I S +DG V +D+R S F C +
Sbjct: 58 DVESTETLD---VFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESSHGEPF-CLA 113
Query: 147 FSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRK 189
++ ++++ +P P A S E ++DIR+
Sbjct: 114 HYPSA--------FHSVMFNPVEPRLLATANSKEGVGLWDIRR 148
Score = 103 (41.3 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 39/162 (24%), Positives = 70/162 (43%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
+K + L G+ H + C+ FNS + SG +D+ VI D + E + H D +
Sbjct: 20 VKPVQLKGEHHSNIFCL---AFNSGNTKVFSGGNDEQVILHD-VESTETLDVFA-HEDAV 74
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY 120
+ + P +D +SS DG+V + I E + L + + + P P ++
Sbjct: 75 YGLSVSP-VNDNIFASSSDDGRVLIWDIRESSHGEPFCLAHYPSAFHSVMFNPVEPRLLA 133
Query: 121 SCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNA 162
+ V +D+R ++ L Y + S S S+R N+
Sbjct: 134 TANSKEGVGLWDIRRPQSSLLRYGGNLSLQSAM---SVRFNS 172
>GENEDB_PFALCIPARUM|PF14_0262 [details] [associations]
symbol:PF14_0262 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014187 RefSeq:XP_001348436.2
ProteinModelPortal:Q8ILI1 EnsemblProtists:PF14_0262:mRNA
GeneID:811844 KEGG:pfa:PF14_0262 EuPathDB:PlasmoDB:PF3D7_1428400
Uniprot:Q8ILI1
Length = 1990
Score = 137 (53.3 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 268 YSGHRNSQ-TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPH 326
+ GH N+ +K + F+ ND+ +++ SD G ++ W K GKL+ ++ VN ++ H
Sbjct: 1884 FLGHSNTAWEMKELAFW--NDDVILAASDNGEVYFWSIKDGKLLNVIRSQARHVNCVQVH 1941
Query: 327 PHIPMFATCGIEKTVKLWAPMPT-DFPPLPDNAEKI-MKANKQGRE 370
P AT G+E +K+W P T +F + N + I +K N +E
Sbjct: 1942 PQGTCLATSGLENYIKIWKPHDTVEFVFVIKNEQNIYIKMNTLVKE 1987
Score = 107 (42.7 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 38/131 (29%), Positives = 64/131 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVS-GSDDKLVIF----WDWKDRREKFSYLSGHLDNIFQTR 64
L+GH VN +++N L S GSD K++I+ +++K + K + H+ +IF
Sbjct: 48 LNGHTSFVNRLKWNDDNHLLASCGSDRKVLIWNINSYNYKPK-PKCIVNTNHVSSIFG-- 104
Query: 65 IMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPG-SPYIIYSCG 123
+ F D+ +IT + D QV + I +D H V +A P + I +S
Sbjct: 105 -VSFIDNDFVITGAMDKQVHVYNIHDDSYKVIHNC--HLKTVRHIATIPKENKNIFWSSS 161
Query: 124 EDGFVQHFDLR 134
+DG V+ +D R
Sbjct: 162 DDGTVRQYDTR 172
Score = 100 (40.3 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 55/218 (25%), Positives = 92/218 (42%)
Query: 13 HKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDR 72
H + V F DF+++G+ DK V ++ D K + + HL + +P +
Sbjct: 98 HVSSIFGVSFIDN-DFVITGAMDKQVHVYNIHDDSYKVIH-NCHLKTVRHIATIPKENKN 155
Query: 73 KIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHFD 132
+SS DG VR + DT+ KH + V P +I + G Q++
Sbjct: 156 IFWSSSDDGTVR--------QYDTRE--KH------ICVSPNCRNVIINLNRIGD-QYYT 198
Query: 133 LRSDSAT---RLFYCSSFSENSKQ---PMNS---------IRLNAIVIDPRNPNYFAVGG 177
R+ R+ + S +++N+ + MN I+ I ++P NY V
Sbjct: 199 QRNPEERLYHRMKFQSHYTKNTYELIRAMNEQKFCNVNVPIQARCIAVNPIFNNYIGVCS 258
Query: 178 SDEYARVYDIRKCHWYS-----PISSDTPVDTFCPRHL 210
+D +RVYD R +S + S P DT+ P+HL
Sbjct: 259 NDMLSRVYDRRMLGKFSLNEKMTLRSCIPSDTYYPKHL 296
Score = 68 (29.0 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 196 ISSDTPVDTFCPRHL---IGKN-----NIHI---TGLAYSNTSELL-ISYNDELVYLFE 242
+ S P DT+ P+HL I + N H+ T L +SN + L ++YN E VYL++
Sbjct: 282 LRSCIPSDTYYPKHLWNYIDEESDFRINYHLFYSTDLCWSNNGKYLGVTYNTEHVYLYD 340
>UNIPROTKB|Q8ILI1 [details] [associations]
symbol:PF14_0262 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014187 RefSeq:XP_001348436.2
ProteinModelPortal:Q8ILI1 EnsemblProtists:PF14_0262:mRNA
GeneID:811844 KEGG:pfa:PF14_0262 EuPathDB:PlasmoDB:PF3D7_1428400
Uniprot:Q8ILI1
Length = 1990
Score = 137 (53.3 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 268 YSGHRNSQ-TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPH 326
+ GH N+ +K + F+ ND+ +++ SD G ++ W K GKL+ ++ VN ++ H
Sbjct: 1884 FLGHSNTAWEMKELAFW--NDDVILAASDNGEVYFWSIKDGKLLNVIRSQARHVNCVQVH 1941
Query: 327 PHIPMFATCGIEKTVKLWAPMPT-DFPPLPDNAEKI-MKANKQGRE 370
P AT G+E +K+W P T +F + N + I +K N +E
Sbjct: 1942 PQGTCLATSGLENYIKIWKPHDTVEFVFVIKNEQNIYIKMNTLVKE 1987
Score = 107 (42.7 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 38/131 (29%), Positives = 64/131 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVS-GSDDKLVIF----WDWKDRREKFSYLSGHLDNIFQTR 64
L+GH VN +++N L S GSD K++I+ +++K + K + H+ +IF
Sbjct: 48 LNGHTSFVNRLKWNDDNHLLASCGSDRKVLIWNINSYNYKPK-PKCIVNTNHVSSIFG-- 104
Query: 65 IMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPG-SPYIIYSCG 123
+ F D+ +IT + D QV + I +D H V +A P + I +S
Sbjct: 105 -VSFIDNDFVITGAMDKQVHVYNIHDDSYKVIHNC--HLKTVRHIATIPKENKNIFWSSS 161
Query: 124 EDGFVQHFDLR 134
+DG V+ +D R
Sbjct: 162 DDGTVRQYDTR 172
Score = 100 (40.3 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 55/218 (25%), Positives = 92/218 (42%)
Query: 13 HKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDR 72
H + V F DF+++G+ DK V ++ D K + + HL + +P +
Sbjct: 98 HVSSIFGVSFIDN-DFVITGAMDKQVHVYNIHDDSYKVIH-NCHLKTVRHIATIPKENKN 155
Query: 73 KIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHFD 132
+SS DG VR + DT+ KH + V P +I + G Q++
Sbjct: 156 IFWSSSDDGTVR--------QYDTRE--KH------ICVSPNCRNVIINLNRIGD-QYYT 198
Query: 133 LRSDSAT---RLFYCSSFSENSKQ---PMNS---------IRLNAIVIDPRNPNYFAVGG 177
R+ R+ + S +++N+ + MN I+ I ++P NY V
Sbjct: 199 QRNPEERLYHRMKFQSHYTKNTYELIRAMNEQKFCNVNVPIQARCIAVNPIFNNYIGVCS 258
Query: 178 SDEYARVYDIRKCHWYS-----PISSDTPVDTFCPRHL 210
+D +RVYD R +S + S P DT+ P+HL
Sbjct: 259 NDMLSRVYDRRMLGKFSLNEKMTLRSCIPSDTYYPKHL 296
Score = 68 (29.0 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 196 ISSDTPVDTFCPRHL---IGKN-----NIHI---TGLAYSNTSELL-ISYNDELVYLFE 242
+ S P DT+ P+HL I + N H+ T L +SN + L ++YN E VYL++
Sbjct: 282 LRSCIPSDTYYPKHLWNYIDEESDFRINYHLFYSTDLCWSNNGKYLGVTYNTEHVYLYD 340
>UNIPROTKB|H0YEI6 [details] [associations]
symbol:WDTC1 "WD and tetratricopeptide repeats protein 1"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006006 "glucose metabolic process" evidence=IEA] [GO:0008361
"regulation of cell size" evidence=IEA] [GO:0032869 "cellular
response to insulin stimulus" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0045717 "negative regulation of fatty acid
biosynthetic process" evidence=IEA] [GO:0055082 "cellular chemical
homeostasis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0032869 GO:GO:0004857 GO:GO:0001701
GO:GO:0006006 GO:GO:0008361 GO:GO:0000122 GO:GO:0045717
GO:GO:0035264 EMBL:AL663123 EMBL:AL590640 HGNC:HGNC:29175
ChiTaRS:WDTC1 GO:GO:0055082 ProteinModelPortal:H0YEI6
Ensembl:ENST00000472249 Bgee:H0YEI6 Uniprot:H0YEI6
Length = 125
Score = 165 (63.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 44/125 (35%), Positives = 64/125 (51%)
Query: 290 VMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT 349
++SGSD G FIW+K+ LVR++ GD +VN L+PHP AT GI+ V+LW P P
Sbjct: 1 IVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRP- 59
Query: 350 DFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNAADFESD 409
+ L + M+ Q + R+ P +M +L + R T A+D E D
Sbjct: 60 ESEDLTGRVVEDMEGASQANQ--RRMNADPLEVM-LLNMGYRIT-GLSSGGAGASDDE-D 114
Query: 410 EEEGE 414
EG+
Sbjct: 115 SSEGQ 119
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 134 (52.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 29/89 (32%), Positives = 50/89 (56%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
DL++ + Y GH+ + G F G +D +V+SGS+ + IW ++ GKL+ + G
Sbjct: 411 DLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLSGHV 470
Query: 318 HVVNQLEPHPHIP-MFATCGIEKTVKLWA 345
VN + +P P FA+ G + TV++W+
Sbjct: 471 KCVNYVAYNPVDPYQFASAGDDNTVRIWS 499
Score = 99 (39.9 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 26/79 (32%), Positives = 38/79 (48%)
Query: 11 HGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD 70
H H V + ++ G +L S S DK I +D + + F L GH+D + R P D
Sbjct: 210 HDHSDEVWQISYSHNGRYLASASKDKTAIIFDVVNLKRVFR-LIGHIDTVAYIRWSP--D 266
Query: 71 DRKIITSSADGQVRLGQIF 89
DR +++ S D V L F
Sbjct: 267 DRYLLSCSCDKSVILWDAF 285
Score = 56 (24.8 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
+L GH V + ++ +L+S S DK VI WD
Sbjct: 250 RLIGHIDTVAYIRWSPDDRYLLSCSCDKSVILWD 283
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 131 (51.2 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 42/146 (28%), Positives = 64/146 (43%)
Query: 1 MKRINLC-GKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDN 59
++ + C L GH V +V F+ TG +L SGS D V FWD F+ GH
Sbjct: 100 VRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFT-CKGHRHW 158
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP--GSPY 117
+ P D RK+ + +GQ+ L G+ + L H + L+ EP +P
Sbjct: 159 VLSISWSP--DGRKLASGCKNGQILLWDP-STGKQVGRTLAGHSKWITGLSWEPLHANPE 215
Query: 118 IIY--SCGEDGFVQHFDLRSDSATRL 141
Y S +DG V+ +D + R+
Sbjct: 216 CRYVASSSKDGSVRIWDTTAGRCERI 241
Score = 100 (40.3 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 249 PSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK 308
P+ S++P+DLQ + V+G GP E ++SGSD LF+W K
Sbjct: 308 PAEASVNPQDLQGSLQELKERALSRYNLVRGQ---GP--ERLVSGSDDFTLFLWSPAEDK 362
Query: 309 --LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
L R M G + ++NQ+ P + A+ +K++KLW
Sbjct: 363 KPLTR-MTGHQALINQVLFSPDSRIVASASFDKSIKLW 399
Score = 56 (24.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 290 VMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
++SGS L +W K KL + G V ++ P A+ G +K +++W
Sbjct: 429 LVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 54 (24.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQL 323
++ +GH +Q+V + + G D + S S + +W+ G L R + G H VN +
Sbjct: 240 RILTGH--TQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTM 293
Score = 53 (23.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 17/80 (21%), Positives = 33/80 (41%)
Query: 283 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 342
F P+ V S S + +W + GK + + G V Q+ + + + T+K
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 439
Query: 343 LWAPMPTDFP-PLPDNAEKI 361
+W LP +A+++
Sbjct: 440 VWDVKAQKLAMDLPGHADEV 459
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 121 (47.7 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRR-EKFSYLSGHLDNIFQTRIMP 67
KL GH G VN V+FN ++SGS D V WD + RR E L D I ++
Sbjct: 104 KLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQDGISSLKV-- 161
Query: 68 FTDDRKIITSSADGQVR 84
+ +++T S DG+VR
Sbjct: 162 --SEHELLTGSVDGRVR 176
Score = 100 (40.3 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 31/87 (35%), Positives = 42/87 (48%)
Query: 268 YSGHRNSQTVKGVNF---FGPNDEYVMSGSDCGHLFIWKKKGGKL-VRLMVGDRHVVNQL 323
YSGH N KG D +V+S S+ GH++ W G L ++L VG + VV L
Sbjct: 229 YSGHVN----KGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVG-KAVVQSL 283
Query: 324 EPHPHIPMFATCGIEKTVKLWAPMPTD 350
HP P T +E V++W P D
Sbjct: 284 SFHPTEPRLLT-SMEGRVQVWGAEPED 309
Score = 92 (37.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 14 KGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDRK 73
+G V AV FN+ G++L++ DK + W R SGH + D+ +
Sbjct: 25 QGAVRAVRFNADGNYLLTCGSDKSLKLWS-VSRGTLLKTYSGHGYEVLDAD--GSYDNSQ 81
Query: 74 IITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHFDL 133
+ + S+D V L + G++ T++L H G+V + + ++ S DG V+ +D
Sbjct: 82 LCSCSSDKTVILWDV-ASGQV-TRKLRGHAGKVNCVQFNEEAT-VMLSGSIDGTVRCWDT 138
Query: 134 RS 135
RS
Sbjct: 139 RS 140
>TAIR|locus:2061997 [details] [associations]
symbol:AT2G47410 "AT2G47410" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009630 "gravitropism"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
EMBL:CP002685 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0080008
KO:K11797 IPI:IPI00537086 RefSeq:NP_850474.3 UniGene:At.36365
ProteinModelPortal:F4IL43 PRIDE:F4IL43 EnsemblPlants:AT2G47410.1
GeneID:819354 KEGG:ath:AT2G47410 OMA:CDSSMIP Uniprot:F4IL43
Length = 1520
Score = 160 (61.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 54/186 (29%), Positives = 88/186 (47%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPF 68
KL GH+ V F+ +G ++++GSDD+LV W + S GH +I T +
Sbjct: 231 KLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLAS-CRGHEGDI--TDLAVS 287
Query: 69 TDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP--GSPYIIYSCGEDG 126
+++ + ++S D +R+ ++ DG M L H G V +A P S Y + S +DG
Sbjct: 288 SNNALVASASNDFVIRVWRL-PDG-MPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDG 345
Query: 127 FVQHFDLR-SDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPN--YFAVGGSDEYAR 183
+ +D R S R++ S N+ N+ + + I+ N N F G SD AR
Sbjct: 346 TCRIWDARYSQWLPRIYVPSPSDANTGSTSNASQSHQILCCAYNANGTIFVTGSSDSNAR 405
Query: 184 VYDIRK 189
V+ K
Sbjct: 406 VWSASK 411
Score = 73 (30.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 252 LSLSPEDLQKREEPQVYSGHRNSQTVKGVNF--FGPNDEYVMSG-SDCGHLFIWKKKGGK 308
L + P L + P+ R T +GVN + ++ +V++ DC + +W G
Sbjct: 504 LKVPPPPLPP-QPPRGGPRQRFLPTPRGVNMIIWSLDNRFVLAAIMDC-RICVWNAADGS 561
Query: 309 LVRLMVGDRHVVNQLEPHPHIPMFA-TCGIE-KTV--KLWAPMP 348
LV + G L+ HP P A + G + KT+ +W +P
Sbjct: 562 LVHCLTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIWDIWEGIP 605
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 112 (44.5 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 22/88 (25%), Positives = 45/88 (51%)
Query: 258 DLQKREEPQVYSGHRNS-QTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 316
D+ E + Y GH+N + + F +D ++SGS+ +I++ GKL+ + G
Sbjct: 236 DIDSYETLKEYKGHKNKVYKINSCSNF--DDSLIISGSEDNDFYIYELLSGKLLSKLSGH 293
Query: 317 RHVVNQLEPHPHIPMFATCGIEKTVKLW 344
+++ ++ HP F T + T+++W
Sbjct: 294 SNIITHVDSHPSKNQFITSSTDCTIRIW 321
Score = 106 (42.4 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 41/162 (25%), Positives = 75/162 (46%)
Query: 1 MKRINLCGK-LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDN 59
M +I+ C K L H G V V++NS G + +SGS DK + ++ K S + ++
Sbjct: 1 MVKIS-CNKVLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVS----KGSMIHSFEEH 55
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYII 119
+ + T D K + S A+ Q+ I G++ + H + + V S ++
Sbjct: 56 GYGIGDLVSTSDNKQLFSCAEKQLYQWDI-ASGQVIRRFQNAHNDTITSVCVNLDST-LL 113
Query: 120 YSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLN 161
+S D V+ +DLR+ S + +++K + SI +N
Sbjct: 114 FSGSSDRLVKAWDLRTKSINPV----QILDDAKDTITSIIVN 151
Score = 45 (20.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 67 PFTDDRK-IITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGED 125
P T +K +ITSS DG +R D RM T + + +++ I SC D
Sbjct: 175 PHTHTQKEVITSSVDGCIRT----YDVRMGTLVTYEDTIPISSVSITKDKKCFIASC-TD 229
Query: 126 GFVQHFDLRS 135
V+ D+ S
Sbjct: 230 ETVKLIDIDS 239
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 120 (47.3 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 40/146 (27%), Positives = 63/146 (43%)
Query: 1 MKRINLC-GKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDN 59
++ + C L GH V +V F+ TG +L SGS D V FWD F+ GH
Sbjct: 51 VRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFT-CQGHRHW 109
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP--GSPY 117
+ P D + + + +GQ+ L G+ + L H + L+ EP +P
Sbjct: 110 VLSISWSP--DGKTLASGCKNGQILLWDP-STGKQVGRVLAGHSKWITGLSWEPLHANPE 166
Query: 118 IIY--SCGEDGFVQHFDLRSDSATRL 141
Y S +DG V+ +D + R+
Sbjct: 167 CRYMASSSKDGSVRVWDTTAGRCERI 192
Score = 98 (39.6 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 249 PSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK 308
P+ S++ +DLQ + R V+G GP E ++SGSD LF+W K
Sbjct: 259 PAEASINAQDLQGSLQELKDRALRRYNLVRGQ---GP--ERLVSGSDDFTLFMWSPAEDK 313
Query: 309 --LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
L R M G + ++NQ+ P + A+ +K++KLW
Sbjct: 314 KPLAR-MTGHQALINQVLFSPDSRIIASASFDKSIKLW 350
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 290 VMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
++SGS L +W K KL + G V ++ P A+ G +K +++W
Sbjct: 380 LVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 54 (24.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQL 323
++ +GH +Q+V + + G D + S S + +W+ G L R + G H VN +
Sbjct: 191 RILTGH--TQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTM 244
Score = 52 (23.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 283 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 342
F P+ + S S + +W + GK + + G V Q+ + + + T+K
Sbjct: 331 FSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 390
Query: 343 LWAPMPTDFPP-LPDNAEKI 361
+W LP +A+++
Sbjct: 391 VWDVKAQKLAADLPGHADEV 410
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 125 (49.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 41/145 (28%), Positives = 63/145 (43%)
Query: 1 MKRINLC-GKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDN 59
++ + C L GH V +V F+ TG +L SGS D V FWD F+ GH
Sbjct: 101 VRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFT-CQGHRHW 159
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP--GSPY 117
+ P D +K+ + +GQ+ L G+ + L H + L+ EP +P
Sbjct: 160 VLSISWSP--DGKKLASGCKNGQILLWDP-STGKQVGRALTGHSKWITALSWEPLHANPE 216
Query: 118 IIY--SCGEDGFVQHFDLRSDSATR 140
Y S +DG V+ +D + R
Sbjct: 217 CRYVASSSKDGSVRVWDTTAGRCER 241
Score = 90 (36.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGK--LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTV 341
G E ++SGSD LF+W K L R M G + ++NQ+ P + A+ +K++
Sbjct: 339 GQGPERLVSGSDDFTLFLWSPAEDKKPLAR-MTGHQALINQVVFSPDSRVIASASFDKSI 397
Query: 342 KLW 344
KLW
Sbjct: 398 KLW 400
Score = 54 (24.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 290 VMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
++SGS L +W K KL + G V ++ P A+ G +K +++W
Sbjct: 430 LVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 53 (23.7 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 18/83 (21%), Positives = 36/83 (43%)
Query: 283 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 342
F P+ + S S + +W + GK + + G V Q+ + + + T+K
Sbjct: 381 FSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 440
Query: 343 LW----APMPTDFPPLPDNAEKI 361
+W + TD LP +A+++
Sbjct: 441 VWDVKAQKLSTD---LPGHADEV 460
Score = 51 (23.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 269 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQL 323
+GH +Q+V + + G D + S S + +W+ G L R + G H VN +
Sbjct: 244 TGH--AQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTM 294
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 139 (54.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V ++FN G + SGS D+ + W + F L GH + I +
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT--S 106
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D +I+++S D VR + E G+ K++ +H V P +I S +DG +
Sbjct: 107 DGSQIVSASPDKTVRAWDV-ETGKQ-IKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAK 164
Query: 130 HFDLRSDSATRLF 142
+D+R A + F
Sbjct: 165 LWDMRQRGAIQTF 177
Score = 98 (39.6 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 38/132 (28%), Positives = 63/132 (47%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRRE--KFSYLSGHLDNIFQTRIMP 67
L GHK + + + S G +VS S DK V WD + ++ K + S +++ TR P
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGP 151
Query: 68 FTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGF 127
II+ S DG +L + + G + T K+Q + ++ + I ++ G D
Sbjct: 152 ----PLIISGSDDGTAKLWDMRQRGAIQTFP-DKYQ--ITAVSFSDAADKI-FTGGVDND 203
Query: 128 VQHFDLRSDSAT 139
V+ +DLR AT
Sbjct: 204 VKVWDLRKGEAT 215
Score = 69 (29.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 17/79 (21%), Positives = 36/79 (45%)
Query: 266 QVYSGHRNSQTVKGVNF-FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLE 324
+++ GH+++ + + P+ V +GS + IW + + + G VN+
Sbjct: 262 KIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECV 321
Query: 325 PHPHIPMFATCGIEKTVKL 343
HP P+ +C +K + L
Sbjct: 322 FHPTEPIIGSCSSDKNIYL 340
Score = 55 (24.4 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 22/124 (17%), Positives = 51/124 (41%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
D+++R Q + + + V+F D+ G D + +W + G+ + G +
Sbjct: 167 DMRQRGAIQTFP---DKYQITAVSFSDAADKIFTGGVD-NDVKVWDLRKGEATMTLEGHQ 222
Query: 318 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS-RIT 376
+ + P T G++ + +W P + P + KI + ++ E + + +
Sbjct: 223 DTITGMSLSPDGSYLLTNGMDNKLCVWDMRP--YAP-QNRCVKIFEGHQHNFEKNLLKCS 279
Query: 377 LTPD 380
+PD
Sbjct: 280 WSPD 283
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 129 (50.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 41/146 (28%), Positives = 64/146 (43%)
Query: 1 MKRINLC-GKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDN 59
++ + C L GH V +V F+ TG +L SGS D V FWD F+ GH
Sbjct: 100 VRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFT-CQGHRHW 158
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP--GSPY 117
+ P D +K+ + +GQ+ L G+ + L H + L+ EP +P
Sbjct: 159 VLSISWSP--DGKKLASGCKNGQILLWDP-STGKQVGRALAGHSKWITALSWEPLHANPE 215
Query: 118 IIY--SCGEDGFVQHFDLRSDSATRL 141
Y S +DG V+ +D + R+
Sbjct: 216 CRYVASSSKDGSVRVWDTTAGRCERI 241
Score = 85 (35.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 288 EYVMSGSDCGHLFIWKKKGGK--LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
E ++SGSD LF+W K L R M G + ++NQ+ P + A+ +K++KLW
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLAR-MTGHQALINQVLFSPDSRIIASASFDKSIKLW 399
Score = 56 (24.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 290 VMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
++SGS L +W K KL + G V ++ P A+ G +K +++W
Sbjct: 429 LVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 54 (24.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQL 323
++ +GH +Q+V + + G D + S S + +W+ G L R + G H VN +
Sbjct: 240 RILTGH--TQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTM 293
Score = 52 (23.4 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 283 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 342
F P+ + S S + +W + GK + + G V Q+ + + + T+K
Sbjct: 380 FSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 439
Query: 343 LWAPMPTDFPP-LPDNAEKI 361
+W LP +A+++
Sbjct: 440 VWDVKAQKLAADLPGHADEV 459
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 123 (48.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRR-EKFSYLSGHLDNIFQTRIMP 67
K GH G VN V+FN ++SGS D V WD + R+ E L D I ++
Sbjct: 104 KFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKV-- 161
Query: 68 FTDDRKIITSSADGQVR-----LGQIFED 91
D +++ S DG+VR +GQ+F D
Sbjct: 162 --SDHEVLAGSVDGRVRRYDLRMGQLFSD 188
Score = 83 (34.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 28/78 (35%), Positives = 37/78 (47%)
Query: 268 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV-RLMVGDRHVVNQLEPH 326
Y+GH+N Q K D +V+S S+ G +F W G LV L VG VV L H
Sbjct: 229 YTGHKN-QEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGVLVLALPVGPS-VVQSLAYH 286
Query: 327 PHIPMFATCGIEKTVKLW 344
P P T + +V+ W
Sbjct: 287 PTEPCLLTA-MGGSVQCW 303
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 133 (51.9 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 56/230 (24%), Positives = 97/230 (42%)
Query: 17 VNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDRKIIT 76
+ +V F+ G FL +G++D+L+ WD ++R+ L GH +I+ P D K+++
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVM-ILQGHEQDIYSLDYFPSGD--KLVS 502
Query: 77 SSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHFDLRSD 136
S D VR+ + G+ L G V +AV PG I + D V+ +D
Sbjct: 503 GSGDRTVRIWDL-RTGQCSLT-LSIEDG-VTTVAVSPGDGKYIAAGSLDRAVRVWD---- 555
Query: 137 SATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPI 196
S T SEN + + ++V R+ G D ++++++ + S
Sbjct: 556 SETGFLVERLDSENESGTGHKDSVYSVVFT-RDGQSVVSGSLDRSVKLWNLQNANNKS-- 612
Query: 197 SSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMG 246
S TP C IG + ++ N +L D V ++K G
Sbjct: 613 DSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 662
Score = 84 (34.6 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 32/106 (30%), Positives = 50/106 (47%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ + ++++ +GD LVSGS D+ V WD R + S D + + P
Sbjct: 481 LQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDL--RTGQCSLTLSIEDGVTTVAVSP-G 537
Query: 70 DDRKIITSSADGQVRLGQIFEDG----RMDTKR-LGK-HQGRVYKL 109
D + I S D VR+ E G R+D++ G H+ VY +
Sbjct: 538 DGKYIAAGSLDRAVRVWDS-ETGFLVERLDSENESGTGHKDSVYSV 582
Score = 83 (34.3 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 286 NDEYVMSGS-DCGHLFIWKKKGGKLVRLMVGDRH------VVNQLEPHPHIPMFATCGIE 338
NDEY++SGS D G LF W KK G + ++ G R+ V N P +FAT +
Sbjct: 641 NDEYILSGSKDRGVLF-WDKKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNVFATGSGD 699
Query: 339 KTVKLW 344
++W
Sbjct: 700 CKARIW 705
>TAIR|locus:2158044 [details] [associations]
symbol:AT5G49430 "AT5G49430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0080008 KO:K11797 IPI:IPI00523511
RefSeq:NP_199754.2 UniGene:At.51087 ProteinModelPortal:F4K639
PRIDE:F4K639 EnsemblPlants:AT5G49430.1 GeneID:835003
KEGG:ath:AT5G49430 OMA:CCAFNAN Uniprot:F4K639
Length = 1677
Score = 153 (58.9 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 67/248 (27%), Positives = 110/248 (44%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPF 68
+L GH+ V + +G ++++GSDD+LV W D + GH +I T +
Sbjct: 240 RLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSM-DTAYCLASCRGHEGDI--TDLAVS 296
Query: 69 TDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP--GSPYIIYSCGEDG 126
+++ I ++S D +R+ ++ DG + L H G V +A P GSPY + S +DG
Sbjct: 297 SNNIFIASASNDCVIRVWRL-PDG-LPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDG 354
Query: 127 FVQHFDLR-SDSATRLFYCSSFSENSKQ--PM--NSIRLNAIVIDPRNPN--YFAVGGSD 179
+ +D R + A R++ S + K P N+ + + I N + F G SD
Sbjct: 355 TCRIWDARGAQFAPRIYVPRPPSPDGKNSGPSSSNAQQSHQIFCCAFNASGSVFVTGSSD 414
Query: 180 EYARVYDI---RKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE 236
ARVY + K + P + +D H N + +G A + + DE
Sbjct: 415 TLARVYSVWSANKTNTDDPEQPNHEMDVLAG-HENDVNYVQFSGCAAGSKFSVTDYSKDE 473
Query: 237 LVYLFEKN 244
V F KN
Sbjct: 474 NVPKF-KN 480
Score = 70 (29.7 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 276 TVKGVNF--FGPNDEYVMSG-SDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMF 332
T +GVN + ++ +V++ DC + +W G LV + G ++ HP P
Sbjct: 543 TPRGVNMIAWSLDNRFVLAAIMDC-RICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRI 601
Query: 333 A-TCGIE-KTV--KLWAPMP 348
A + G + KT+ +W +P
Sbjct: 602 AMSAGYDGKTIVWDIWEGIP 621
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 125 (49.1 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRR-EKFSYLSGHLDNIFQTRIMP 67
K GH G VN V+FN ++SGS D + WD + RR E L D + ++
Sbjct: 104 KFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGVSSVKV-- 161
Query: 68 FTDDRKIITSSADGQVR-----LGQIFED 91
D +I+ S DG+VR +GQ+F D
Sbjct: 162 --SDHEILAGSVDGRVRRYDLRMGQLFSD 188
Score = 80 (33.2 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 27/78 (34%), Positives = 36/78 (46%)
Query: 268 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL-VRLMVGDRHVVNQLEPH 326
Y GH+N Q K D +V+S S+ G +F W G L + L VG VV L H
Sbjct: 229 YKGHKN-QEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGSG-VVQSLAYH 286
Query: 327 PHIPMFATCGIEKTVKLW 344
P P T + +V+ W
Sbjct: 287 PTEPCLLTA-MGGSVQCW 303
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 120 (47.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 42/146 (28%), Positives = 63/146 (43%)
Query: 1 MKRINLC-GKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDN 59
++ + C L GH V +V F+ TG +L SGS D V FWD F+ GH
Sbjct: 100 VRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFT-CKGHRHW 158
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP--GSPY 117
+ P D +K+ + +GQV L G + L H + L+ EP +P
Sbjct: 159 VLSISWSP--DGKKLASGCKNGQVLLWDP-STGLQVGRTLTGHSKWITGLSWEPLHMNPE 215
Query: 118 IIY--SCGEDGFVQHFDLRSDSATRL 141
Y S +DG V+ +D + R+
Sbjct: 216 CRYVASSSKDGSVRVWDTTAGRCERI 241
Score = 91 (37.1 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 249 PSPLSLSPEDLQK--REEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG 306
P+ +++ +DLQ +E + S N V+G GP E ++SGSD LF+W
Sbjct: 308 PAEATVNAQDLQGSLKELKERASSRYN--LVRGQ---GP--ERLVSGSDDFTLFLWSPAE 360
Query: 307 GK--LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
K L R M G + ++NQ+ P + A+ +K++KLW
Sbjct: 361 DKKPLAR-MTGHQALINQVLFSPDSRIVASASFDKSIKLW 399
Score = 56 (24.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 290 VMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
++SGS L +W K KL + G V ++ P A+ G +K +++W
Sbjct: 429 LVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 54 (24.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQL 323
++ +GH +Q+V + + G D + S S + +W+ G L R + G H VN +
Sbjct: 240 RILTGH--TQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTM 293
Score = 54 (24.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 19/83 (22%), Positives = 36/83 (43%)
Query: 283 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 342
F P+ V S S + +W + GK + + G V Q+ + + + T+K
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 439
Query: 343 LW----APMPTDFPPLPDNAEKI 361
+W + TD LP +A+++
Sbjct: 440 VWDVKAQKLATD---LPGHADEV 459
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 120 (47.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 41/146 (28%), Positives = 63/146 (43%)
Query: 1 MKRINLC-GKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDN 59
++ + C L GH V +V F+ TG +L SGS D V FWD F+ GH
Sbjct: 102 VRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFT-CKGHRHW 160
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP--GSPY 117
+ P D +K+ + +GQ+ L G + L H + L+ EP +P
Sbjct: 161 VLSISWSP--DGKKLASGCKNGQILLWDP-STGTQVGRTLTGHSKWITGLSWEPLHMNPE 217
Query: 118 IIY--SCGEDGFVQHFDLRSDSATRL 141
Y S +DG V+ +D + R+
Sbjct: 218 CRYVASSSKDGSVRVWDTTAGRCERI 243
Score = 91 (37.1 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 249 PSPLSLSPEDLQK--REEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG 306
P+ +++ +DLQ +E + S N V+G GP E ++SGSD LF+W
Sbjct: 310 PAEATVNAQDLQGSLKELKERASSRYN--LVRGQ---GP--ERLVSGSDDFTLFLWSPAE 362
Query: 307 GK--LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
K L R M G + ++NQ+ P + A+ +K++KLW
Sbjct: 363 DKKPLAR-MTGHQALINQVLFSPDSRIVASASFDKSIKLW 401
Score = 56 (24.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 290 VMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
++SGS L +W K KL + G V ++ P A+ G +K +++W
Sbjct: 431 LVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 54 (24.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQL 323
++ +GH +Q+V + + G D + S S + +W+ G L R + G H VN +
Sbjct: 242 RILTGH--TQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTM 295
Score = 54 (24.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 19/83 (22%), Positives = 36/83 (43%)
Query: 283 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 342
F P+ V S S + +W + GK + + G V Q+ + + + T+K
Sbjct: 382 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 441
Query: 343 LW----APMPTDFPPLPDNAEKI 361
+W + TD LP +A+++
Sbjct: 442 VWDVKAQKLTTD---LPGHADEV 461
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 123 (48.4 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 35/133 (26%), Positives = 60/133 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+G V +F+ G L S D+L++ W+ + ++ L GH + + T
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN--T 120
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++S D V + E G KRL H V P ++ + +DG V+
Sbjct: 121 DGSMLFSASTDKTVAVWDS-ETGER-VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 130 HFDLRSDSATRLF 142
+D+R +A + F
Sbjct: 179 LWDIRKKAAVQTF 191
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 41/131 (31%), Positives = 59/131 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH G V + +N+ G L S S DK V WD + E+ L GH F P
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGERVKRLKGHTS--FVNSCYPAR 162
Query: 70 DDRKII-TSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
+++ T S DG V+L I + + T + +Q V + S II S G D +
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQ--VLAVTFNDTSDQII-SGGIDNDI 218
Query: 129 QHFDLRSDSAT 139
+ +DLR + T
Sbjct: 219 KVWDLRQNKLT 229
Score = 82 (33.9 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 30/124 (24%), Positives = 52/124 (41%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
D++K+ Q + +N+ V V F +D+ + G D + +W + KL M G
Sbjct: 181 DIRKKAAVQTF---QNTYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHA 236
Query: 318 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS-RIT 376
V L + ++ TV++W P F P + KI + N E + R +
Sbjct: 237 DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP--FAP-KERCVKIFQGNVHNFEKNLLRCS 293
Query: 377 LTPD 380
+PD
Sbjct: 294 WSPD 297
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 130 (50.8 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 44/169 (26%), Positives = 83/169 (49%)
Query: 6 LCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWK--DRREKFSYLSGHLDNIFQT 63
L L HKG + ++++N GD+L++GS D+ + WD K + +++F + SG T
Sbjct: 357 LISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSG------PT 410
Query: 64 RIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYIIYSC 122
+ + ++ TSS D + L +I E K HQG V + +P GS ++ SC
Sbjct: 411 LDVDWRNNVSFATSSTDSMIYLCKIGET--RPAKTFTGHQGEVNCVKWDPTGS--LLASC 466
Query: 123 GEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPN 171
+D + ++++ + + E++K+ + +IR + NPN
Sbjct: 467 SDDSTAKIWNIKQST-----FVHDLREHTKE-IYTIRWSPTGPGTNNPN 509
Score = 81 (33.6 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 268 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 316
++GHR + V + F PN EY+ SGS + IW K GK+V+ G+
Sbjct: 537 FNGHR--EPVYSLAF-SPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGN 582
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 122 (48.0 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 35/133 (26%), Positives = 61/133 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+G V +F+ G+ L S D+L++ W+ + ++ L GH + + T
Sbjct: 89 LSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN--T 146
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++S D V + E G KRL H V P ++ + +DG V+
Sbjct: 147 DGSMLFSASTDKTVAVWDS-ETGER-VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 204
Query: 130 HFDLRSDSATRLF 142
+D+R +A + F
Sbjct: 205 LWDIRKKAAVQTF 217
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 41/131 (31%), Positives = 59/131 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH G V + +N+ G L S S DK V WD + E+ L GH F P
Sbjct: 132 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGERVKRLKGHTS--FVNSCYPAR 188
Query: 70 DDRKII-TSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
+++ T S DG V+L I + + T + +Q V + S II S G D +
Sbjct: 189 RGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQ--VLAVTFNDTSDQII-SGGIDNDI 244
Query: 129 QHFDLRSDSAT 139
+ +DLR + T
Sbjct: 245 KVWDLRQNKLT 255
Score = 83 (34.3 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 30/124 (24%), Positives = 52/124 (41%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
D++K+ Q + +N+ V V F +D+ + G D + +W + KL M G
Sbjct: 207 DIRKKAAVQTF---QNTYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHA 262
Query: 318 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS-RIT 376
V L + ++ TV++W P F P + KI + N E + R +
Sbjct: 263 DSVTGLSLSSEGSYLLSNAMDNTVRIWDVRP--FAP-KERCVKIFQGNVHNFEKNLLRCS 319
Query: 377 LTPD 380
+PD
Sbjct: 320 WSPD 323
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 104 (41.7 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F P +V+S +D L IW K + ++ + H V L+ H
Sbjct: 336 GHDN--WVRGV-LFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKAS 392
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 393 PYVVTGSVDQTVKVW 407
Score = 103 (41.3 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 46/187 (24%), Positives = 77/187 (41%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V + F+ TG L S S D + WD++ E + GH N+ IMP
Sbjct: 146 LKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNG 204
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFV 128
D I+++S D +++ ++ G K H R + V P ++ SC D V
Sbjct: 205 DH--IVSASRDKTMKMWEV-ATGYC-VKTFTGH--REWVRMVRPNQDGTLLASCSNDQTV 258
Query: 129 QHFDLRSDSAT-------RLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGS-DE 180
+ + + + + C S++ S P S + P F + GS D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDK 318
Query: 181 YARVYDI 187
+++DI
Sbjct: 319 TIKMWDI 325
Score = 99 (39.9 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 33/134 (24%), Positives = 63/134 (47%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ V V F+ +VS S+D + WD+ + + L GH D++ + + F
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDY-EAGDFERTLKGHTDSV---QDISFD 159
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
K++ S SAD ++L F+ G + + H V +A+ P +I+ S D +
Sbjct: 160 QTGKLLASCSADMTIKLWD-FQ-GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTM 216
Query: 129 QHFDLRSDSATRLF 142
+ +++ + + F
Sbjct: 217 KMWEVATGYCVKTF 230
Score = 64 (27.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 343
G +++SGS + +W G + +VG + V + HP +C +KT+++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRI 364
Query: 344 W 344
W
Sbjct: 365 W 365
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 126 (49.4 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRR-EKFSYLSGHLDNIFQTRIMP 67
K GH G VN V+FN ++SGS D + WD + RR E L D I ++
Sbjct: 104 KFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGISSVKV-- 161
Query: 68 FTDDRKIITSSADGQVR-----LGQIFED 91
D ++++ S DG+VR +GQ+F D
Sbjct: 162 --SDHEVLSGSVDGRVRRYDLRMGQLFSD 188
Score = 75 (31.5 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 26/78 (33%), Positives = 36/78 (46%)
Query: 268 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL-VRLMVGDRHVVNQLEPH 326
Y+GH+N Q K D +V+S S+ G ++ W G L + L VG VV L H
Sbjct: 229 YTGHKN-QEYKLDCCLSERDTHVVSCSEDGKVYFWDLVEGALALALPVGPG-VVQSLAYH 286
Query: 327 PHIPMFATCGIEKTVKLW 344
P P T + +V W
Sbjct: 287 PTEPCLLTA-MGGSVHCW 303
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 122 (48.0 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 35/133 (26%), Positives = 60/133 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+G V +F+ G L S D+L++ W+ + ++ L GH + + T
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN--T 119
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++S D V + E G KRL H V P ++ + +DG V+
Sbjct: 120 DGSMLFSASTDKTVAVWDS-ETGER-VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 130 HFDLRSDSATRLF 142
+D+R +A + F
Sbjct: 178 LWDIRKKAAIQTF 190
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 41/131 (31%), Positives = 59/131 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH G V + +N+ G L S S DK V WD + E+ L GH F P
Sbjct: 105 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGERVKRLKGHTS--FVNSCYPAR 161
Query: 70 DDRKII-TSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
+++ T S DG V+L I + + T + +Q V + S II S G D +
Sbjct: 162 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQ--VLAVTFNDTSDQII-SGGIDNDI 217
Query: 129 QHFDLRSDSAT 139
+ +DLR + T
Sbjct: 218 KVWDLRQNKLT 228
Score = 81 (33.6 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 30/124 (24%), Positives = 52/124 (41%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
D++K+ Q + +N+ V V F +D+ + G D + +W + KL M G
Sbjct: 180 DIRKKAAIQTF---QNTYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHA 235
Query: 318 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS-RIT 376
V L + ++ TV++W P F P + KI + N E + R +
Sbjct: 236 DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP--FAP-KERCVKIFQGNVHNFEKNLLRCS 292
Query: 377 LTPD 380
+PD
Sbjct: 293 WSPD 296
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 122 (48.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 35/133 (26%), Positives = 60/133 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+G V +F+ G L S D+L++ W+ + ++ L GH + + T
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN--T 120
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++S D V + E G KRL H V P ++ + +DG V+
Sbjct: 121 DGSMLFSASTDKTVAVWDS-ETGER-VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 130 HFDLRSDSATRLF 142
+D+R +A + F
Sbjct: 179 LWDIRKKAAIQTF 191
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 41/131 (31%), Positives = 59/131 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH G V + +N+ G L S S DK V WD + E+ L GH F P
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGERVKRLKGHTS--FVNSCYPAR 162
Query: 70 DDRKII-TSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
+++ T S DG V+L I + + T + +Q V + S II S G D +
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQ--VLAVTFNDTSDQII-SGGIDNDI 218
Query: 129 QHFDLRSDSAT 139
+ +DLR + T
Sbjct: 219 KVWDLRQNKLT 229
Score = 81 (33.6 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 30/124 (24%), Positives = 52/124 (41%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
D++K+ Q + +N+ V V F +D+ + G D + +W + KL M G
Sbjct: 181 DIRKKAAIQTF---QNTYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHA 236
Query: 318 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS-RIT 376
V L + ++ TV++W P F P + KI + N E + R +
Sbjct: 237 DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP--FAP-KERCVKIFQGNVHNFEKNLLRCS 293
Query: 377 LTPD 380
+PD
Sbjct: 294 WSPD 297
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 122 (48.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 35/133 (26%), Positives = 60/133 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+G V +F+ G L S D+L++ W+ + ++ L GH + + T
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN--T 120
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++S D V + E G KRL H V P ++ + +DG V+
Sbjct: 121 DGSMLFSASTDKTVAVWDS-ETGER-VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 130 HFDLRSDSATRLF 142
+D+R +A + F
Sbjct: 179 LWDIRKKAAIQTF 191
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 41/131 (31%), Positives = 59/131 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH G V + +N+ G L S S DK V WD + E+ L GH F P
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGERVKRLKGHTS--FVNSCYPAR 162
Query: 70 DDRKII-TSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
+++ T S DG V+L I + + T + +Q V + S II S G D +
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQ--VLAVTFNDTSDQII-SGGIDNDI 218
Query: 129 QHFDLRSDSAT 139
+ +DLR + T
Sbjct: 219 KVWDLRQNKLT 229
Score = 81 (33.6 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 30/124 (24%), Positives = 52/124 (41%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
D++K+ Q + +N+ V V F +D+ + G D + +W + KL M G
Sbjct: 181 DIRKKAAIQTF---QNTYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHA 236
Query: 318 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS-RIT 376
V L + ++ TV++W P F P + KI + N E + R +
Sbjct: 237 DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP--FAP-KERCVKIFQGNVHNFEKNLLRCS 293
Query: 377 LTPD 380
+PD
Sbjct: 294 WSPD 297
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 123 (48.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRR-EKFSYLSGHLDNIFQTRIMP 67
K GH G VN V+FN ++SGS D + WD + R+ E L D I ++
Sbjct: 104 KFRGHAGKVNTVQFNEEATVILSGSIDSTIRCWDCRSRKPEPVQTLDEARDGISSVKV-- 161
Query: 68 FTDDRKIITSSADGQVR-----LGQIFED 91
D +++ S DG+VR +GQ+F D
Sbjct: 162 --SDHEVLAGSVDGRVRRYDLRMGQLFSD 188
Score = 77 (32.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 25/78 (32%), Positives = 37/78 (47%)
Query: 268 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL-VRLMVGDRHVVNQLEPH 326
Y+GH+N + K D +V+S S+ G +F W G L + L VG VV L H
Sbjct: 229 YTGHKNKE-YKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGPG-VVQSLTYH 286
Query: 327 PHIPMFATCGIEKTVKLW 344
P P T + +++ W
Sbjct: 287 PTEPCLLTA-MGGSIQCW 303
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 158 (60.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 82/308 (26%), Positives = 123/308 (39%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPF 68
+L GHKG + + +FNS G L SG DK + W+ +S L GH I +
Sbjct: 57 QLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWS-- 114
Query: 69 TDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
TD +I T+ D + + G + KR+ +H G V P ++ S +D
Sbjct: 115 TDSNEIYTACTDKSIGVWDS-NKGEL-IKRIREHSGVVNSCCPARRGPPLVASGSDDRSA 172
Query: 129 QHFDLRSDSATRLF---Y-CSS--FSENSKQPMNSIRLNAI-VIDPRN---PNYFAVGGS 178
+ FD RS +T LF Y +S FS+ S Q + N I V D RN P Y
Sbjct: 173 RIFDTRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQ 232
Query: 179 DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKN-NIHITGLAYSNTSELLISYNDEL 237
D + + S D + R N NI A +N + LI + +
Sbjct: 233 DTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSI 292
Query: 238 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG 297
+ +G G S + D ++ GH S TV V F PN+ + S S
Sbjct: 293 D---GRRIGCGSSDRQVYIWDTNTKQLQYCLPGH--SGTVNEVTFH-PNEPIIASCSSDK 346
Query: 298 HLFIWKKK 305
+++ + K
Sbjct: 347 TIYLGEIK 354
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 104 (41.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 51/195 (26%), Positives = 86/195 (44%)
Query: 169 NP-NYFAVGGS-DEYARVYDIRK--CHWYSPISSDTPVDTFCPRH---LIGKNN----IH 217
NP + V GS DE R++D+R C P SD PV LI + +
Sbjct: 172 NPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSD-PVSAVSFNRDGSLITSGSYDGLVR 230
Query: 218 ITGLAYSNTSELLIS-YNDELVYL-FEKN-MGLGPSPL--SLSPEDLQKREEPQVYSGHR 272
I A + L+ N + ++ F N + S L +L D K + + Y GH
Sbjct: 231 IWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHE 290
Query: 273 NSQTVKGVNFFGPNDEYVMSGS-DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPM 331
N++ NF ++++SGS DC +++W + ++V+ + G V + HP M
Sbjct: 291 NNKYCIFANFSVTGGKWIISGSEDC-KIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNM 349
Query: 332 FATCGIE--KTVKLW 344
A+ +E T+++W
Sbjct: 350 IASGALEPDNTIRIW 364
Score = 100 (40.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 35/130 (26%), Positives = 62/130 (47%)
Query: 6 LCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRI 65
L + GH ++AV+F+ G FL + S DK V W+ D + + L+GH +
Sbjct: 71 LISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERT-LTGHKLGV--NDF 127
Query: 66 MPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGED 125
D + I+T+S D +++ ++ +M K L H V+ P S ++ S D
Sbjct: 128 AWSADSKSIVTASDDKTLKIYEV-PTVKM-AKTLKGHTNYVFCCNFNPQSSLVV-SGSFD 184
Query: 126 GFVQHFDLRS 135
V+ +D+R+
Sbjct: 185 ESVRIWDVRT 194
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 121 (47.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 35/133 (26%), Positives = 59/133 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+G V +F+ G L S D+L++ W + ++ L GH + + T
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYN--T 120
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++S D V + E G KRL H V P ++ + +DG V+
Sbjct: 121 DGSMLFSASTDKTVAVWDS-ETGER-VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 130 HFDLRSDSATRLF 142
+D+R +A + F
Sbjct: 179 LWDIRKKAAIQTF 191
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 41/131 (31%), Positives = 59/131 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH G V + +N+ G L S S DK V WD + E+ L GH F P
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGERVKRLKGHTS--FVNSCYPAR 162
Query: 70 DDRKII-TSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
+++ T S DG V+L I + + T + +Q V + S II S G D +
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQ--VLAVTFNDTSDQII-SGGIDNDI 218
Query: 129 QHFDLRSDSAT 139
+ +DLR + T
Sbjct: 219 KVWDLRQNKLT 229
Score = 81 (33.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 30/124 (24%), Positives = 52/124 (41%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
D++K+ Q + +N+ V V F +D+ + G D + +W + KL M G
Sbjct: 181 DIRKKAAIQTF---QNTYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHA 236
Query: 318 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS-RIT 376
V L + ++ TV++W P F P + KI + N E + R +
Sbjct: 237 DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP--FAP-KERCVKIFQGNVHNFEKNLLRCS 293
Query: 377 LTPD 380
+PD
Sbjct: 294 WSPD 297
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 122 (48.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 35/133 (26%), Positives = 60/133 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+G V +F+ G L S D+L++ W+ + ++ L GH + + T
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN--T 119
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++S D V + E G KRL H V P ++ + +DG V+
Sbjct: 120 DGSMLFSASTDKTVAVWDS-ETGER-VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 130 HFDLRSDSATRLF 142
+D+R +A + F
Sbjct: 178 LWDIRKKAAIQTF 190
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 41/131 (31%), Positives = 59/131 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH G V + +N+ G L S S DK V WD + E+ L GH F P
Sbjct: 105 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGERVKRLKGHTS--FVNSCYPAR 161
Query: 70 DDRKII-TSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
+++ T S DG V+L I + + T + +Q V + S II S G D +
Sbjct: 162 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQ--VLAVTFNDTSDQII-SGGIDNDI 217
Query: 129 QHFDLRSDSAT 139
+ +DLR + T
Sbjct: 218 KVWDLRQNKLT 228
Score = 81 (33.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 30/124 (24%), Positives = 52/124 (41%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
D++K+ Q + +N+ V V F +D+ + G D + +W + KL M G
Sbjct: 180 DIRKKAAIQTF---QNTYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHA 235
Query: 318 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS-RIT 376
V L + ++ TV++W P F P + KI + N E + R +
Sbjct: 236 DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP--FAP-KERCVKIFQGNVHNFEKNLLRCS 292
Query: 377 LTPD 380
+PD
Sbjct: 293 WSPD 296
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 106 (42.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 23/82 (28%), Positives = 45/82 (54%)
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 325
+ Y+GH+N + +F ++V+SGS+ ++IW + ++V+ + G VV
Sbjct: 244 KTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAAC 303
Query: 326 HPHIPMFATCGIE--KTVKLWA 345
HP + A+ +E KT+K+W+
Sbjct: 304 HPTKNIIASAALENDKTIKVWS 325
Score = 95 (38.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 36/152 (23%), Positives = 74/152 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH +++V+F+ G++L S + D L+I W D K + L GH I + + +
Sbjct: 35 LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKT-LYGHSLEI--SDVAWSS 91
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D +++++S D +++ + G+ K L H V+ P S I+ S D V+
Sbjct: 92 DSSRLVSASDDKTLKVWDM-RSGKC-LKTLKGHSDFVFCCDFNPPSNLIV-SGSFDESVK 148
Query: 130 HFDLRSDSATRLFYCSSFSENSKQPMNSIRLN 161
+++++ + S+ S+ P++++ N
Sbjct: 149 IWEVKTGKCLKTL--SAHSD----PISAVNFN 174
Score = 73 (30.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 273 NSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHV-VNQLEPHPHIPM 331
+S + VNF N ++SGS G IW G+ +R + + + V+ ++ P+
Sbjct: 164 HSDPISAVNF-NCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKY 222
Query: 332 FATCGIEKTVKLW 344
T ++ T+KLW
Sbjct: 223 ILTATLDNTLKLW 235
Score = 53 (23.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 166 DPRNPNYFA----VGGSDEYARVYDIRKCHWYSPISSDTPV------DTFCPRHLIGKNN 215
+P+ PNY G S + V W + ++D + D C + L G ++
Sbjct: 23 EPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYG-HS 81
Query: 216 IHITGLAYSNTSELLISYNDE 236
+ I+ +A+S+ S L+S +D+
Sbjct: 82 LEISDVAWSSDSSRLVSASDD 102
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 107 (42.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 31/96 (32%), Positives = 51/96 (53%)
Query: 250 SPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND-EYVMSGSDCGHLFIWKKKGGK 308
S LSLS E+LQ+ S + Q V P++ E ++S SD L++W+ K
Sbjct: 320 SHLSLSTEELQE-------SALKRYQAVC------PDEVESLVSCSDDNTLYLWRNNQNK 366
Query: 309 LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
V M G ++VVN ++ P + + A+ +K+V+LW
Sbjct: 367 CVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLW 402
Score = 99 (39.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 43/153 (28%), Positives = 70/153 (45%)
Query: 12 GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD 71
GHK V V + G L SG +I WD + ++K LSGH +I P+ D
Sbjct: 159 GHKQWVLCVSWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRD 218
Query: 72 ---RKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
RK+ ++S DG R+ + + G+ + H V AV G +IY+ +D V
Sbjct: 219 PECRKLASASGDGDCRIWDV-KLGQC-LMNIAGHTNAV--TAVRWGGAGLIYTSSKDRTV 274
Query: 129 QHFDLRSDSATRLFYCSSFSENSKQPMNSIRLN 161
+ + +D C +FS ++ +N+I L+
Sbjct: 275 KMWRA-ADG----ILCRTFSGHAHW-VNNIALS 301
Score = 87 (35.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 28/114 (24%), Positives = 48/114 (42%)
Query: 1 MKRINLC-GKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDN 59
++ + C + GH V ++ F+ G L SGS D V WD F+ +GH
Sbjct: 105 VRPVTRCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFT-CTGHKQW 163
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP 113
+ P D +++ + G + + E G+ + L H+ + LA EP
Sbjct: 164 VLCVSWAP--DGKRLASGCKAGSIIIWDP-ETGQQKGRPLSGHKKHINCLAWEP 214
Score = 65 (27.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 22/78 (28%), Positives = 36/78 (46%)
Query: 268 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP 327
+ GH Q V V + + ++SGS L +W + KL + + G V ++ P
Sbjct: 413 FRGH--VQAVYTVAW-SADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAP 469
Query: 328 HIPMFATCGIEKTVKLWA 345
A+ G +K +KLWA
Sbjct: 470 DGSRVASGGKDKVIKLWA 487
>UNIPROTKB|G4MT88 [details] [associations]
symbol:MGG_04651 "SET1 complex component swd1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CM001232 KO:K14961
RefSeq:XP_003713641.1 ProteinModelPortal:G4MT88
EnsemblFungi:MGG_04651T0 GeneID:2678091 KEGG:mgr:MGG_04651
Uniprot:G4MT88
Length = 468
Score = 132 (51.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 49/182 (26%), Positives = 78/182 (42%)
Query: 253 SLSPEDLQKREEPQVYSGHRNSQTVKGVNF----FGPNDEYVMSGSDCGH-LFIWKKKGG 307
+L+ ED + Q+ H+ V + + F EYV + + H L+IW++ G
Sbjct: 244 NLAAEDFDP-DTIQLVDEHKFQDVVNRLQWNHVTFSATGEYVAASTYNNHELYIWERNHG 302
Query: 308 KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEK-TVKLWA-PMPTDFPPL-PDNAEKIMKA 364
LVR++ G + +E HPH M A CG+E + +W+ P + L PD E
Sbjct: 303 SLVRMLEGTKEEQGTIEWHPHRAMLAACGLETGRINIWSVTSPQRWSALAPDFVEVEENV 362
Query: 365 NKQGREDHSRITLTPDVIMHVLRLQRR--QTLAYRERRYNAADFESDEEEGETYLLGFSD 422
RED I ++ L L+ + LA D ++ + Y LG SD
Sbjct: 363 QYVEREDEFDILEQEEIAKRRLDLEDDDVEVLAMHANDGYTGD-DTTFQVPILYNLGESD 421
Query: 423 SD 424
S+
Sbjct: 422 SE 423
Score = 71 (30.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 12 GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
GH C+ FN GD+L SG D V+ WD D L GH ++
Sbjct: 25 GHATCLR---FNRKGDYLASGRVDGAVVVWDL-DTMGVARKLRGHSKSV 69
Score = 59 (25.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKD 45
KL GH V ++ +++ G +L+S I WD ++
Sbjct: 61 KLRGHSKSVTSLSWSTCGRYLLSACQGWKAIIWDLRN 97
Score = 37 (18.1 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 22 FNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDRKIIT-SSAD 80
++S GD++++G+ + D K FS + L + T M T + KI+ +S D
Sbjct: 179 YDSAGDYILAGTSKGWLNIIDAKTHEVIFSKKTCAL--VITT--MRLTHNGKILLLNSQD 234
Query: 81 GQVR 84
+R
Sbjct: 235 RIIR 238
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 122 (48.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 35/133 (26%), Positives = 60/133 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+G V +F+ G L S D+L++ W+ + ++ L GH + + T
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN--T 120
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++S D V + E G KRL H V P ++ + +DG V+
Sbjct: 121 DGSMLFSASTDKTVAVWDS-ETGER-VKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 130 HFDLRSDSATRLF 142
+D+R +A + F
Sbjct: 179 LWDIRKKAAIQTF 191
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 41/131 (31%), Positives = 59/131 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH G V + +N+ G L S S DK V WD + E+ L GH F P
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD-SETGERVKRLKGHTS--FVNSCYPAR 162
Query: 70 DDRKII-TSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
+++ T S DG V+L I + + T + +Q V + S II S G D +
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQ--VLAVTFNDTSDQII-SGGIDNDI 218
Query: 129 QHFDLRSDSAT 139
+ +DLR + T
Sbjct: 219 KVWDLRQNKLT 229
Score = 78 (32.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 29/124 (23%), Positives = 52/124 (41%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
D++K+ Q + +N+ V V F +D+ + G D + +W + KL M G
Sbjct: 181 DIRKKAAIQTF---QNTYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHA 236
Query: 318 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS-RIT 376
V L + ++ TV++W P F P + +I + N E + R +
Sbjct: 237 DSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP--FAP-KERCVRIFQGNVHNFEKNLLRCS 293
Query: 377 LTPD 380
+PD
Sbjct: 294 WSPD 297
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 117 (46.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRR-EKFSYLSGHLDNIFQTRIMP 67
K GH G VN V+FN ++SGS D V WD + R+ E L D I ++
Sbjct: 104 KFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKV-- 161
Query: 68 FTDDRKIITSSADGQVR-----LGQIFED 91
D +I+ S DG+VR +GQ+ D
Sbjct: 162 --SDHEILAGSVDGRVRRYDLRMGQVSSD 188
Score = 81 (33.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 26/78 (33%), Positives = 37/78 (47%)
Query: 268 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL-VRLMVGDRHVVNQLEPH 326
Y GH+N Q K D +V+S S+ G +F W G L + L VG +VV L H
Sbjct: 229 YVGHKNQQ-YKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGS-NVVQSLAYH 286
Query: 327 PHIPMFATCGIEKTVKLW 344
P P T + +++ W
Sbjct: 287 PTEPCLLTA-MGGSIQYW 303
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 117 (46.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 31/89 (34%), Positives = 43/89 (48%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRR-EKFSYLSGHLDNIFQTRIMP 67
K GH G VN V+FN ++SGS D V WD + R+ E L D I ++
Sbjct: 104 KFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKV-- 161
Query: 68 FTDDRKIITSSADGQVR-----LGQIFED 91
D +I+ S DG+VR +GQ+ D
Sbjct: 162 --SDHEILAGSVDGRVRRYDLRMGQVTSD 188
Score = 81 (33.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 26/78 (33%), Positives = 37/78 (47%)
Query: 268 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL-VRLMVGDRHVVNQLEPH 326
Y GH+N Q K D +V+S S+ G +F W G L + L VG +VV L H
Sbjct: 229 YVGHKN-QKYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGSLALALPVGS-NVVQSLAYH 286
Query: 327 PHIPMFATCGIEKTVKLW 344
P P T + +++ W
Sbjct: 287 PADPCLLTA-MGGSIQYW 303
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 106 (42.4 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 32/134 (23%), Positives = 62/134 (46%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ + V F+ +VS S+D + WD++ + S L GH D++ + + F
Sbjct: 104 LTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERS-LKGHTDSV---QDVAFD 159
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
K++ S SAD ++L F+ K + H V +A P Y++ S D +
Sbjct: 160 AQGKLLASCSADLSIKLWD-FQQSYECIKTMHGHDHNVSSVAFVPAGDYVL-SASRDRTI 217
Query: 129 QHFDLRSDSATRLF 142
+ +++ + + +
Sbjct: 218 KMWEVATGYCVKTY 231
Score = 97 (39.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 29/116 (25%), Positives = 53/116 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V V F++ G L S S D + WD++ E + GH N+ +P
Sbjct: 146 LKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAG 205
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGED 125
D ++++S D +++ ++ + T + R+ ++ +E GS I +C D
Sbjct: 206 D--YVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIE-GS--IFATCSND 256
Score = 95 (38.5 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 269 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 328
SGH N V+G+ F P +Y++S SD + +W + + ++ + +H ++ H
Sbjct: 336 SGHDN--WVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 329 IPMFATCGIEKTVKLW 344
P + +++TVK+W
Sbjct: 393 HPYVISGSVDQTVKVW 408
Score = 53 (23.7 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 289 YVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
++ SGS + IW G + + G + V L HP + +KT+++W
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 106 (42.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 38/137 (27%), Positives = 59/137 (43%)
Query: 1 MKRINLC-GKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDN 59
++ + C L GH V +V F+ TG +L SGS D V FWD +F+ GH
Sbjct: 113 VRAVTRCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFT-AKGHRHW 171
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPG--SPY 117
+ P D +K+ + + Q+ L G + L H + L EP +P
Sbjct: 172 VLSIAWSP--DGKKLASGCKNSQIFLWDP-ATGNQIGRVLTGHSKWITCLCWEPLHINPE 228
Query: 118 IIY--SCGEDGFVQHFD 132
Y S +DG ++ +D
Sbjct: 229 CRYLASASKDGSIRIWD 245
Score = 97 (39.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 26/97 (26%), Positives = 49/97 (50%)
Query: 249 PSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKK-KGG 307
P+ +++P+D+ + V+G GP E ++SGSD LF+W+ +
Sbjct: 321 PAEATINPQDMSGSLAELKDKAQQRYDKVRGQ---GP--ERLVSGSDDFTLFLWRPAEDK 375
Query: 308 KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
K + M G + ++NQ+ P + A+ +K++KLW
Sbjct: 376 KPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLW 412
Score = 63 (27.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 26/138 (18%), Positives = 52/138 (37%)
Query: 230 LISYNDELVYLFEKNMGLGPSPLSLSPEDL-----QKREEPQVYSGHRNSQTVKGVNFFG 284
L D+ ++K G GP L +D + E+ + Q + F
Sbjct: 335 LAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFS 394
Query: 285 PNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
P+ + S S + +W+ + GK + + G V Q+ + + + T+K+W
Sbjct: 395 PDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVW 454
Query: 345 APMPTDFP-PLPDNAEKI 361
LP +A+++
Sbjct: 455 DAETKKLAIDLPGHADEV 472
Score = 60 (26.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQL 323
++ +GH +Q+V V + G D + S S + +W+ + G L R + G H VN +
Sbjct: 253 KILTGH--TQSVTCVKWGG--DGLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTM 306
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 102 (41.0 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ V V F+ +VS S+D + WD++ + + L GH D++ + + F
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-LKGHTDSV---QDISFD 94
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
K++ S SAD ++L F+ G + + H V +A+ P +I+ S D +
Sbjct: 95 HSGKLLASCSADMTIKLWD-FQ-GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTI 151
Query: 129 QHFDLRSDSATRLF 142
+ +++++ + F
Sbjct: 152 KMWEVQTGYCVKTF 165
Score = 99 (39.9 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V + F+ +G L S S D + WD++ E + GH N+ IMP
Sbjct: 81 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNG 139
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFV 128
D I+++S D +++ ++ + G K H R + V P +I SC D V
Sbjct: 140 DH--IVSASRDKTIKMWEV-QTGYC-VKTFTGH--REWVRMVRPNQDGTLIASCSNDQTV 193
Query: 129 Q 129
+
Sbjct: 194 R 194
Score = 96 (38.9 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F ++++S +D L +W K + ++ + H V L+ H
Sbjct: 271 GHDN--WVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 327
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 328 PYVVTGSVDQTVKVW 342
Score = 79 (32.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+HGH V++V GD +VS S DK + W+ + ++ +GH + + R P
Sbjct: 123 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVR--PNQ 179
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPY 117
D I + S D VR+ + + K L +H+ V ++ P S Y
Sbjct: 180 DGTLIASCSNDQTVRVWVV---ATKECKAELREHEHVVECISWAPESSY 225
Score = 57 (25.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 343
G +++SGS + +W G + +VG + V + H +C +KT+++
Sbjct: 240 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 299
Query: 344 W 344
W
Sbjct: 300 W 300
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 104 (41.7 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 46/187 (24%), Positives = 77/187 (41%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V + F+ TG L S S D + WD++ E + GH N+ IMP
Sbjct: 146 LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNG 204
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFV 128
D I+++S D +++ ++ + G K H R + V P +I SC D V
Sbjct: 205 DH--IVSASRDKTIKMWEV-QTGYC-VKTFTGH--REWVRMVRPNQDGTLIASCSNDQTV 258
Query: 129 QHFDLRSDSAT-------RLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGS-DE 180
+ + + + + C S++ S S + P F + GS D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 181 YARVYDI 187
+++DI
Sbjct: 319 TIKMWDI 325
Score = 101 (40.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ V V F+ +VS S+D + WD++ + + L GH D++ + + F
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-LKGHTDSV---QDISFD 159
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
K++ S SAD ++L F+ G + + H V +A+ P +I+ S D +
Sbjct: 160 HTGKLLASCSADMTIKLWD-FQ-GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTI 216
Query: 129 QHFDLRSDSATRLF 142
+ +++++ + F
Sbjct: 217 KMWEVQTGYCVKTF 230
Score = 95 (38.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F ++++S +D L +W K + ++ + H V L+ H
Sbjct: 336 GHDN--WVRGV-LFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 393 PYVVTGSVDQTVKVW 407
Score = 56 (24.8 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 343
G +++SGS + +W G + +VG + V + H +C +KT+++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 344 W 344
W
Sbjct: 365 W 365
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 135 (52.6 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPF 68
KL+GH G V ++F + LVSGS D +I WDW++RR Y GH DN+ +
Sbjct: 256 KLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYF-GHTDNVLGVVV--- 311
Query: 69 TDDRKIITSSADGQVRLGQI 88
+ II+SS D R+ ++
Sbjct: 312 -SENYIISSSRDHTARVWRL 330
Score = 64 (27.6 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 14/59 (23%), Positives = 32/59 (54%)
Query: 286 NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
N ++++SGS + I++ GKL+R++ G ++ + + + G + TV++W
Sbjct: 398 NGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDE--KIVSGGYDGTVRIW 454
Score = 48 (22.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 248 GPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG 307
G S L++ + + ++ GH + ++ V F NDE ++SG G + IW G
Sbjct: 405 GSSDLTIRIFEASSGKLLRMLQGHED--LIRTVRF---NDEKIVSGGYDGTVRIWNFNTG 459
Query: 308 K 308
+
Sbjct: 460 E 460
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 102 (41.0 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ V V F+ +VS S+D + WD++ + + L GH D++ + + F
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-LKGHTDSV---QDISFD 159
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
K++ S SAD ++L F+ G + + H V +A+ P +I+ S D +
Sbjct: 160 HSGKLLASCSADMTIKLWD-FQ-GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTI 216
Query: 129 QHFDLRSDSATRLF 142
+ +++++ + F
Sbjct: 217 KMWEVQTGYCVKTF 230
Score = 99 (39.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V + F+ +G L S S D + WD++ E + GH N+ IMP
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNG 204
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFV 128
D I+++S D +++ ++ + G K H R + V P +I SC D V
Sbjct: 205 DH--IVSASRDKTIKMWEV-QTGYC-VKTFTGH--REWVRMVRPNQDGTLIASCSNDQTV 258
Query: 129 Q 129
+
Sbjct: 259 R 259
Score = 96 (38.9 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F ++++S +D L +W K + ++ + H V L+ H
Sbjct: 336 GHDN--WVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 393 PYVVTGSVDQTVKVW 407
Score = 79 (32.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+HGH V++V GD +VS S DK + W+ + ++ +GH + + R P
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVR--PNQ 244
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPY 117
D I + S D VR+ + + K L +H+ V ++ P S Y
Sbjct: 245 DGTLIASCSNDQTVRVWVV---ATKECKAELREHEHVVECISWAPESSY 290
Score = 57 (25.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 343
G +++SGS + +W G + +VG + V + H +C +KT+++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 344 W 344
W
Sbjct: 365 W 365
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 102 (41.0 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ V V F+ +VS S+D + WD++ + + L GH D++ + + F
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-LKGHTDSV---QDISFD 159
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
K++ S SAD ++L F+ G + + H V +A+ P +I+ S D +
Sbjct: 160 HSGKLLASCSADMTIKLWD-FQ-GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTI 216
Query: 129 QHFDLRSDSATRLF 142
+ +++++ + F
Sbjct: 217 KMWEVQTGYCVKTF 230
Score = 99 (39.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V + F+ +G L S S D + WD++ E + GH N+ IMP
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNG 204
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFV 128
D I+++S D +++ ++ + G K H R + V P +I SC D V
Sbjct: 205 DH--IVSASRDKTIKMWEV-QTGYC-VKTFTGH--REWVRMVRPNQDGTLIASCSNDQTV 258
Query: 129 Q 129
+
Sbjct: 259 R 259
Score = 96 (38.9 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F ++++S +D L +W K + ++ + H V L+ H
Sbjct: 336 GHDN--WVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 393 PYVVTGSVDQTVKVW 407
Score = 79 (32.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+HGH V++V GD +VS S DK + W+ + ++ +GH + + R P
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVR--PNQ 244
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPY 117
D I + S D VR+ + + K L +H+ V ++ P S Y
Sbjct: 245 DGTLIASCSNDQTVRVWVV---ATKECKAELREHEHVVECISWAPESSY 290
Score = 57 (25.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 343
G +++SGS + +W G + +VG + V + H +C +KT+++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 344 W 344
W
Sbjct: 365 W 365
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 102 (41.0 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ V V F+ +VS S+D + WD++ + + L GH D++ + + F
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-LKGHTDSV---QDISFD 159
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
K++ S SAD ++L F+ G + + H V +A+ P +I+ S D +
Sbjct: 160 HSGKLLASCSADMTIKLWD-FQ-GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTI 216
Query: 129 QHFDLRSDSATRLF 142
+ +++++ + F
Sbjct: 217 KMWEVQTGYCVKTF 230
Score = 99 (39.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V + F+ +G L S S D + WD++ E + GH N+ IMP
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNG 204
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFV 128
D I+++S D +++ ++ + G K H R + V P +I SC D V
Sbjct: 205 DH--IVSASRDKTIKMWEV-QTGYC-VKTFTGH--REWVRMVRPNQDGTLIASCSNDQTV 258
Query: 129 Q 129
+
Sbjct: 259 R 259
Score = 96 (38.9 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F ++++S +D L +W K + ++ + H V L+ H
Sbjct: 336 GHDN--WVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 393 PYVVTGSVDQTVKVW 407
Score = 79 (32.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+HGH V++V GD +VS S DK + W+ + ++ +GH + + R P
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVR--PNQ 244
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPY 117
D I + S D VR+ + + K L +H+ V ++ P S Y
Sbjct: 245 DGTLIASCSNDQTVRVWVV---ATKECKAELREHEHVVECISWAPESSY 290
Score = 57 (25.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 343
G +++SGS + +W G + +VG + V + H +C +KT+++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 344 W 344
W
Sbjct: 365 W 365
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 102 (41.0 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ V V F+ +VS S+D + WD++ + + L GH D++ + + F
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-LKGHTDSV---QDISFD 159
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
K++ S SAD ++L F+ G + + H V +A+ P +I+ S D +
Sbjct: 160 HSGKLLASCSADMTIKLWD-FQ-GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTI 216
Query: 129 QHFDLRSDSATRLF 142
+ +++++ + F
Sbjct: 217 KMWEVQTGYCVKTF 230
Score = 99 (39.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V + F+ +G L S S D + WD++ E + GH N+ IMP
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNG 204
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFV 128
D I+++S D +++ ++ + G K H R + V P +I SC D V
Sbjct: 205 DH--IVSASRDKTIKMWEV-QTGYC-VKTFTGH--REWVRMVRPNQDGTLIASCSNDQTV 258
Query: 129 Q 129
+
Sbjct: 259 R 259
Score = 96 (38.9 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F ++++S +D L +W K + ++ + H V L+ H
Sbjct: 336 GHDN--WVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 393 PYVVTGSVDQTVKVW 407
Score = 79 (32.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+HGH V++V GD +VS S DK + W+ + ++ +GH + + R P
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVR--PNQ 244
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPY 117
D I + S D VR+ + + K L +H+ V ++ P S Y
Sbjct: 245 DGTLIASCSNDQTVRVWVV---ATKECKAELREHEHVVECISWAPESSY 290
Score = 57 (25.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 343
G +++SGS + +W G + +VG + V + H +C +KT+++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 344 W 344
W
Sbjct: 365 W 365
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 102 (41.0 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ V V F+ +VS S+D + WD++ + + L GH D++ + + F
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-LKGHTDSV---QDISFD 159
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
K++ S SAD ++L F+ G + + H V +A+ P +I+ S D +
Sbjct: 160 HSGKLLASCSADMTIKLWD-FQ-GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTI 216
Query: 129 QHFDLRSDSATRLF 142
+ +++++ + F
Sbjct: 217 KMWEVQTGYCVKTF 230
Score = 99 (39.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V + F+ +G L S S D + WD++ E + GH N+ IMP
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNG 204
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFV 128
D I+++S D +++ ++ + G K H R + V P +I SC D V
Sbjct: 205 DH--IVSASRDKTIKMWEV-QTGYC-VKTFTGH--REWVRMVRPNQDGTLIASCSNDQTV 258
Query: 129 Q 129
+
Sbjct: 259 R 259
Score = 96 (38.9 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F ++++S +D L +W K + ++ + H V L+ H
Sbjct: 336 GHDN--WVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 393 PYVVTGSVDQTVKVW 407
Score = 79 (32.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+HGH V++V GD +VS S DK + W+ + ++ +GH + + R P
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVR--PNQ 244
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPY 117
D I + S D VR+ + + K L +H+ V ++ P S Y
Sbjct: 245 DGTLIASCSNDQTVRVWVV---ATKECKAELREHEHVVECISWAPESSY 290
Score = 57 (25.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 343
G +++SGS + +W G + +VG + V + H +C +KT+++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 344 W 344
W
Sbjct: 365 W 365
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 102 (41.0 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ V V F+ +VS S+D + WD++ + + L GH D++ + + F
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-LKGHTDSV---QDISFD 159
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
K++ S SAD ++L F+ G + + H V +A+ P +I+ S D +
Sbjct: 160 HSGKLLASCSADMTIKLWD-FQ-GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTI 216
Query: 129 QHFDLRSDSATRLF 142
+ +++++ + F
Sbjct: 217 KMWEVQTGYCVKTF 230
Score = 99 (39.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V + F+ +G L S S D + WD++ E + GH N+ IMP
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNG 204
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFV 128
D I+++S D +++ ++ + G K H R + V P +I SC D V
Sbjct: 205 DH--IVSASRDKTIKMWEV-QTGYC-VKTFTGH--REWVRMVRPNQDGTLIASCSNDQTV 258
Query: 129 Q 129
+
Sbjct: 259 R 259
Score = 96 (38.9 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F ++++S +D L +W K + ++ + H V L+ H
Sbjct: 336 GHDN--WVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 393 PYVVTGSVDQTVKVW 407
Score = 79 (32.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+HGH V++V GD +VS S DK + W+ + ++ +GH + + R P
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVR--PNQ 244
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPY 117
D I + S D VR+ + + K L +H+ V ++ P S Y
Sbjct: 245 DGTLIASCSNDQTVRVWVV---ATKECKAELREHEHVVECISWAPESSY 290
Score = 57 (25.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 343
G +++SGS + +W G + +VG + V + H +C +KT+++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 344 W 344
W
Sbjct: 365 W 365
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 102 (41.0 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ V V F+ +VS S+D + WD++ + + L GH D++ + + F
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-LKGHTDSV---QDISFD 159
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
K++ S SAD ++L F+ G + + H V +A+ P +I+ S D +
Sbjct: 160 HSGKLLASCSADMTIKLWD-FQ-GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTI 216
Query: 129 QHFDLRSDSATRLF 142
+ +++++ + F
Sbjct: 217 KMWEVQTGYCVKTF 230
Score = 99 (39.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V + F+ +G L S S D + WD++ E + GH N+ IMP
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNG 204
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFV 128
D I+++S D +++ ++ + G K H R + V P +I SC D V
Sbjct: 205 DH--IVSASRDKTIKMWEV-QTGYC-VKTFTGH--REWVRMVRPNQDGTLIASCSNDQTV 258
Query: 129 Q 129
+
Sbjct: 259 R 259
Score = 96 (38.9 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F ++++S +D L +W K + ++ + H V L+ H
Sbjct: 336 GHDN--WVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 393 PYVVTGSVDQTVKVW 407
Score = 79 (32.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+HGH V++V GD +VS S DK + W+ + ++ +GH + + R P
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVR--PNQ 244
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPY 117
D I + S D VR+ + + K L +H+ V ++ P S Y
Sbjct: 245 DGTLIASCSNDQTVRVWVV---ATKECKAELREHEHVVECISWAPESSY 290
Score = 57 (25.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 343
G +++SGS + +W G + +VG + V + H +C +KT+++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 344 W 344
W
Sbjct: 365 W 365
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 102 (41.0 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ V V F+ +VS S+D + WD++ + + L GH D++ + + F
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-LKGHTDSV---QDISFD 159
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
K++ S SAD ++L F+ G + + H V +A+ P +I+ S D +
Sbjct: 160 HSGKLLASCSADMTIKLWD-FQ-GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTI 216
Query: 129 QHFDLRSDSATRLF 142
+ +++++ + F
Sbjct: 217 KMWEVQTGYCVKTF 230
Score = 99 (39.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V + F+ +G L S S D + WD++ E + GH N+ IMP
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNG 204
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFV 128
D I+++S D +++ ++ + G K H R + V P +I SC D V
Sbjct: 205 DH--IVSASRDKTIKMWEV-QTGYC-VKTFTGH--REWVRMVRPNQDGTLIASCSNDQTV 258
Query: 129 Q 129
+
Sbjct: 259 R 259
Score = 96 (38.9 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F ++++S +D L +W K + ++ + H V L+ H
Sbjct: 336 GHDN--WVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 393 PYVVTGSVDQTVKVW 407
Score = 79 (32.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+HGH V++V GD +VS S DK + W+ + ++ +GH + + R P
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVR--PNQ 244
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPY 117
D I + S D VR+ + + K L +H+ V ++ P S Y
Sbjct: 245 DGTLIASCSNDQTVRVWVV---ATKECKAELREHEHVVECISWAPESSY 290
Score = 57 (25.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 343
G +++SGS + +W G + +VG + V + H +C +KT+++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 344 W 344
W
Sbjct: 365 W 365
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 102 (41.0 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ V V F+ +VS S+D + WD++ + + L GH D++ + + F
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-LKGHTDSV---QDISFD 159
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
K++ S SAD ++L F+ G + + H V +A+ P +I+ S D +
Sbjct: 160 HSGKLLASCSADMTIKLWD-FQ-GFECIRTMHGHDHNVSSVAIMPNGDHIV-SAARDKTI 216
Query: 129 QHFDLRSDSATRLF 142
+ +++++ + F
Sbjct: 217 KMWEVQTGYCVKTF 230
Score = 96 (38.9 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F ++++S +D L +W K + ++ + H V L+ H
Sbjct: 336 GHDN--WVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 393 PYVVTGSVDQTVKVW 407
Score = 96 (38.9 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 33/121 (27%), Positives = 54/121 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V + F+ +G L S S D + WD++ E + GH N+ IMP
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNG 204
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFV 128
D I++++ D +++ ++ + G K H R + V P +I SC D V
Sbjct: 205 DH--IVSAARDKTIKMWEV-QTGYC-VKTFTGH--REWVRMVRPNQDGTLIASCSNDQTV 258
Query: 129 Q 129
+
Sbjct: 259 R 259
Score = 76 (31.8 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 29/109 (26%), Positives = 50/109 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+HGH V++V GD +VS + DK + W+ + ++ +GH + + R P
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTF-TGHREWVRMVR--PNQ 244
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPY 117
D I + S D VR+ + + K L +H+ V ++ P S Y
Sbjct: 245 DGTLIASCSNDQTVRVWVV---ATKECKAELREHEHVVECISWAPESSY 290
Score = 57 (25.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 343
G +++SGS + +W G + +VG + V + H +C +KT+++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 344 W 344
W
Sbjct: 365 W 365
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 101 (40.6 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV P +Y++S +D L IW K + + + H V L+ H
Sbjct: 336 GHDN--WVRGV-LVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTA 392
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 393 PYVVTGSVDQTVKVW 407
Score = 97 (39.2 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V + F+ TG L S S D + WD++ E + GH N+ IMP
Sbjct: 146 LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNG 204
Query: 70 DDRKIITSSADGQVRLGQI 88
D I+++S D +++ ++
Sbjct: 205 DH--IVSASRDKTIKMWEV 221
Score = 86 (35.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+HGH V++V GD +VS S DK + W+ ++ +GH + + R P
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTF-TGHREWVRMVR--PNQ 244
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGED 125
D I +SS D VR+ + R +H A E P I+ + G +
Sbjct: 245 DGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSE 300
Score = 66 (28.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 343
G +++SGS + +W G + +VG + V + HP +C +KT+++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRI 364
Query: 344 W 344
W
Sbjct: 365 W 365
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 150 (57.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 53/199 (26%), Positives = 94/199 (47%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH +N V +S G F +SGS D V WD S++ GH ++F P
Sbjct: 68 LTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFI-GHTSDVFSVSFSP-- 124
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPG-SPYIIYSCGEDGFV 128
D+R+I+++S D ++L + T +H + + P + II SCG D V
Sbjct: 125 DNRQIVSASRDKTIKLWNTLAQCKY-TITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLV 183
Query: 129 QHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
+ ++L++ C N ++ LN + I P + + A GG D A+++D++
Sbjct: 184 KVWNLKN--------CDL---NKNLEGHTGVLNTVTISP-DGSLCASGGKDGVAKLWDVK 231
Query: 189 KC-HWYSPISSDTPVDTFC 206
+ H YS + + + +++ C
Sbjct: 232 EGKHLYS-LETGSTINSLC 249
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 150 (57.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 53/199 (26%), Positives = 94/199 (47%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH +N V +S G F +SGS D V WD S++ GH ++F P
Sbjct: 68 LTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFI-GHTSDVFSVSFSP-- 124
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPG-SPYIIYSCGEDGFV 128
D+R+I+++S D ++L + T +H + + P + II SCG D V
Sbjct: 125 DNRQIVSASRDKTIKLWNTLAQCKY-TITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLV 183
Query: 129 QHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
+ ++L++ C N ++ LN + I P + + A GG D A+++D++
Sbjct: 184 KVWNLKN--------CDL---NKNLEGHTGVLNTVTISP-DGSLCASGGKDGVAKLWDVK 231
Query: 189 KC-HWYSPISSDTPVDTFC 206
+ H YS + + + +++ C
Sbjct: 232 EGKHLYS-LETGSTINSLC 249
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 150 (57.9 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 39/135 (28%), Positives = 60/135 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH G + +F+S G FL S D+ + W+ E F+ L GH I + +
Sbjct: 32 LQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFN--A 89
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D ++++ D VR+ + E G + H V + V P +I S +DG V
Sbjct: 90 DSSHLVSAGTDKTVRVWDM-ETGSC-IRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVM 147
Query: 130 HFDLRSDSATRLFYC 144
D+RS A + F C
Sbjct: 148 VHDMRSKEAAKKFIC 162
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 101 (40.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/134 (24%), Positives = 64/134 (47%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ V V F+ +VS S+D + WD++ + + L GH D++ + F
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-LKGHTDSVED---ISFD 159
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
K++ S SAD ++L F+ G + + H V +A+ P +I+ S D +
Sbjct: 160 HSGKLLASCSADMTIKLWD-FQ-GFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTI 216
Query: 129 QHFDLRSDSATRLF 142
+ +++++ + F
Sbjct: 217 KMWEVQTGYCVKTF 230
Score = 99 (39.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V + F+ +G L S S D + WD++ E + GH N+ IMP
Sbjct: 146 LKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGF-ECIRTMHGHDHNVSSVAIMPNG 204
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFV 128
D I+++S D +++ ++ + G K H R + V P +I SC D V
Sbjct: 205 DH--IVSASRDKTIKMWEV-QTGYC-VKTFTGH--REWVRMVRPNQDGTLIASCSNDQTV 258
Query: 129 Q 129
+
Sbjct: 259 R 259
Score = 96 (38.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F ++++S +D L +W K + ++ + H V L+ H
Sbjct: 336 GHDN--WVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 393 PYVVTGSVDQTVKVW 407
Score = 79 (32.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+HGH V++V GD +VS S DK + W+ + ++ +GH + + R P
Sbjct: 188 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVR--PNQ 244
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPY 117
D I + S D VR+ + + K L +H+ V ++ P S Y
Sbjct: 245 DGTLIASCSNDQTVRVWVV---ATKECKAELREHEHVVECISWAPESSY 290
Score = 57 (25.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 284 GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKL 343
G +++SGS + +W G + +VG + V + H +C +KT+++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 344 W 344
W
Sbjct: 365 W 365
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 127 (49.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 20 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 79
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 80 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 139
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 140 SVSEDNIMQ 148
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 126 (49.4 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 26/85 (30%), Positives = 47/85 (55%)
Query: 263 EEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQ 322
++P +SGHR S+ V F G + ++ SGS+ ++IW K K + ++ G VN
Sbjct: 431 KQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNC 490
Query: 323 LEPHPHIP-MFATCGIEKTVKLWAP 346
+ +P P M A+ ++T+++W P
Sbjct: 491 VSWNPKNPRMLASASDDQTIRIWGP 515
Score = 67 (28.6 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD-WKDRREKFSY-LSGHLDNIFQTRIMP 67
L HK V V+F+++G +L + S D I W D + + + L H + + P
Sbjct: 220 LVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSP 279
Query: 68 FTDDRKIIT 76
DD K++T
Sbjct: 280 --DDTKLLT 286
Score = 44 (20.5 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 23/118 (19%), Positives = 48/118 (40%)
Query: 3 RINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQ 62
++ L L H+ V+ V ++ L++ + +++ WD + ++ G+ + F
Sbjct: 258 KVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTF--GNNNTGFT 315
Query: 63 TRIMP-FTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYII 119
F D +++ S+D + + DG G +V LAV P +I
Sbjct: 316 VSSCAWFPDSTRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMI 373
Score = 40 (19.1 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 9/18 (50%), Positives = 9/18 (50%)
Query: 202 VDTFCPRHLIGKNNIHIT 219
VDT RH G NN T
Sbjct: 298 VDTGVLRHTFGNNNTGFT 315
>WB|WBGene00017435 [details] [associations]
symbol:F13H8.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:FO080709 RefSeq:NP_495256.1
ProteinModelPortal:Q19433 SMR:Q19433 DIP:DIP-25827N
MINT:MINT-1128581 STRING:Q19433 PaxDb:Q19433 EnsemblMetazoa:F13H8.2
GeneID:174038 KEGG:cel:CELE_F13H8.2 UCSC:F13H8.2 CTD:174038
WormBase:F13H8.2 InParanoid:Q19433 NextBio:882237 Uniprot:Q19433
Length = 929
Score = 118 (46.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 29/113 (25%), Positives = 54/113 (47%)
Query: 12 GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD 71
GHK VN +EF+S G +G D +++ WD R F L GH +++ Q + + D
Sbjct: 101 GHKKAVNCIEFSSDGLLFATGGKDGVIVLWDILAERGMFR-LHGHKESVTQMKFV--RGD 157
Query: 72 RKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGE 124
R II++S D ++ I T +++ +Y +++ ++ + E
Sbjct: 158 RFIISTSKDSLIKFWSIASQSCFYTVMDSRNE--IYSMSLHRDETVLVAATAE 208
Score = 81 (33.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 277 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG 336
+ VNF P D Y+++G G + +++ +LV + ++ P F T
Sbjct: 454 IVAVNFV-PGDNYILTGGKNGEIGVFELSSAELVETRKAHTGAIWTIQNSPDNEGFITAS 512
Query: 337 IEKTVKLWA 345
+KTV+ W+
Sbjct: 513 ADKTVRFWS 521
>WB|WBGene00012479 [details] [associations]
symbol:Y18D10A.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000003 GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:AL034393 PIR:T26531
RefSeq:NP_493247.2 ProteinModelPortal:Q9XW12 SMR:Q9XW12
IntAct:Q9XW12 STRING:Q9XW12 PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9
GeneID:173152 KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 144 (55.7 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 70/245 (28%), Positives = 110/245 (44%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSY---LSGHLDNIFQTRI 65
KL GH+ V F+ + +FL + S DK V FW +D E FS L H ++ Q
Sbjct: 106 KLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQ-QDEDEDFSVSSILQPHTQDVKQVAW 164
Query: 66 MPFTDDRKIITSSADGQVRLGQIF-EDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGE 124
P T+D +++ S D +R + ED K G H G V+ +A + ++ + GE
Sbjct: 165 HP-TEDL-LVSCSYDSSIRFYRFDGEDWVTQQKIDGCHVGTVWSIAFDTEGHRLV-TVGE 221
Query: 125 DGFVQHF---DLRSDSATRLFYCSSFS---ENSKQPMNSIRLNAIVIDPRNPNYFAVGGS 178
D +Q F ++ S SA + + S EN++ P+ S+ N+ N + A GG
Sbjct: 222 DHCIQLFVRENIGSKSADQDTWKSVARYDVENTRWPLYSVAWNST-----N-DVIATGGG 275
Query: 179 DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE-L 237
D R++ I SP+ V RH + N H+ S LL S +D+
Sbjct: 276 DCKIRLFKISSTP-ESPVIEHLGV---VGRHELDVN--HVAWNPNPKFSNLLTSASDDGT 329
Query: 238 VYLFE 242
+ L+E
Sbjct: 330 IRLWE 334
>UNIPROTKB|Q9XW12 [details] [associations]
symbol:Y18D10A.9 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1 homolog" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003 GO:GO:0016226
HOGENOM:HOG000208901 OMA:SWKCVCT GeneTree:ENSGT00700000104486
EMBL:AL034393 PIR:T26531 RefSeq:NP_493247.2
ProteinModelPortal:Q9XW12 SMR:Q9XW12 IntAct:Q9XW12 STRING:Q9XW12
PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9 GeneID:173152
KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 144 (55.7 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 70/245 (28%), Positives = 110/245 (44%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSY---LSGHLDNIFQTRI 65
KL GH+ V F+ + +FL + S DK V FW +D E FS L H ++ Q
Sbjct: 106 KLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQ-QDEDEDFSVSSILQPHTQDVKQVAW 164
Query: 66 MPFTDDRKIITSSADGQVRLGQIF-EDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGE 124
P T+D +++ S D +R + ED K G H G V+ +A + ++ + GE
Sbjct: 165 HP-TEDL-LVSCSYDSSIRFYRFDGEDWVTQQKIDGCHVGTVWSIAFDTEGHRLV-TVGE 221
Query: 125 DGFVQHF---DLRSDSATRLFYCSSFS---ENSKQPMNSIRLNAIVIDPRNPNYFAVGGS 178
D +Q F ++ S SA + + S EN++ P+ S+ N+ N + A GG
Sbjct: 222 DHCIQLFVRENIGSKSADQDTWKSVARYDVENTRWPLYSVAWNST-----N-DVIATGGG 275
Query: 179 DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE-L 237
D R++ I SP+ V RH + N H+ S LL S +D+
Sbjct: 276 DCKIRLFKISSTP-ESPVIEHLGV---VGRHELDVN--HVAWNPNPKFSNLLTSASDDGT 329
Query: 238 VYLFE 242
+ L+E
Sbjct: 330 IRLWE 334
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 128 (50.1 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 36/130 (27%), Positives = 62/130 (47%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPF 68
+L GH G V AV F+ T + SGS D+ ++ W+ + E + LSGH I +
Sbjct: 61 ELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILSGHKGAILDLQWS-- 118
Query: 69 TDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
D + I ++SAD + I E G+ + +G H+ + + + ++ S +DG +
Sbjct: 119 RDSKTIFSASADMTLASWDI-ESGQRIRRYIG-HEEVINSVEISKRGQEMLVSASDDGTM 176
Query: 129 QHFDLRSDSA 138
+D R A
Sbjct: 177 GIWDPRQKEA 186
Score = 57 (25.1 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 16/64 (25%), Positives = 24/64 (37%)
Query: 290 VMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT 349
V SG + +W + +V M G + LE P + + TV+ W P
Sbjct: 208 VFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRP- 266
Query: 350 DFPP 353
F P
Sbjct: 267 -FAP 269
Score = 55 (24.4 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 13/62 (20%), Positives = 30/62 (48%)
Query: 283 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI-PMFATCGIEKTV 341
+ P + + +GS + +W K GK++ + G + VN + P+ P+ + ++ +
Sbjct: 293 WNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNL 352
Query: 342 KL 343
L
Sbjct: 353 ML 354
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 115 (45.5 bits), Expect = 7.8e-07, Sum P(3) = 7.8e-07
Identities = 48/168 (28%), Positives = 72/168 (42%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSY---LSGHLDNIFQTRIMPFTDDRKIITSSADG 81
+G+F+ G D + + K R L GH + R F DD +IITSS D
Sbjct: 64 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR---FLDDNQIITSSGDT 120
Query: 82 QVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYIIYSCGEDGFVQHFDLRSDSATR 140
L I E G+ G H G V L++ P G ++ +C D ++ +D+R DS R
Sbjct: 121 TCALWDI-ETGQQTVGFAG-HSGDVMSLSLAPDGRTFVSGAC--DASIKLWDVR-DSMCR 175
Query: 141 LFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
+ S+ +NA+ P N F G D R++D+R
Sbjct: 176 QTFIGHESD----------INAVAFFP-NGYAFTTGSDDATCRLFDLR 212
Score = 58 (25.5 bits), Expect = 7.8e-07, Sum P(3) = 7.8e-07
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 7 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 39
Score = 44 (20.5 bits), Expect = 7.8e-07, Sum P(3) = 7.8e-07
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 315
DL+ +E +YS H N + G+ F + +++G D + IW G ++ G
Sbjct: 210 DLRADQELLMYS-HDN--IICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAG 266
Query: 316 DRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
+ V+ L AT + +K+W
Sbjct: 267 HDNRVSCLGVTDDGMAVATGSWDSFLKIW 295
>UNIPROTKB|F1S4C1 [details] [associations]
symbol:DCAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0080008
GeneTree:ENSGT00530000062951 EMBL:CU633187
Ensembl:ENSSSCT00000002564 Uniprot:F1S4C1
Length = 132
Score = 121 (47.7 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 37/91 (40%), Positives = 48/91 (52%)
Query: 5 NLCGK-LHGHKGCVNAVEF-NSTGDFLVSGSDDKLVIFWDWKDR---REKFSYLSG-HLD 58
NL K L GH GCVNA+EF N+ G +LVSG DD+ V+ W + R K L G H
Sbjct: 43 NLYKKDLLGHFGCVNAIEFSNNGGQWLVSGGDDRRVLLWHMEQAIHSRVKPIQLKGEHHS 102
Query: 59 NIFQTRIMPFTD-DRKIITSSADGQVRLGQI 88
NIF + F + K+ + D QV L +
Sbjct: 103 NIF---CLAFNSGNTKVFSGGNDEQVILHDV 130
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 95 (38.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 325
+VY+GH N F N +Y++SGS+ +++W + +++ + G V +
Sbjct: 249 KVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSC 308
Query: 326 HPHIPMFATCG--IEKTVKLW 344
HP ++ G ++KT+++W
Sbjct: 309 HPVQNEISSSGNHLDKTIRIW 329
Score = 90 (36.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 29/137 (21%), Positives = 59/137 (43%)
Query: 5 NLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTR 64
+L + GH ++ + ++S + S SDD + WD + E L GH + +F
Sbjct: 76 SLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVN 135
Query: 65 IMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVE-PGSPYIIYSCG 123
P I++ S D +R+ ++ + G+ + + H + + GS +I S
Sbjct: 136 FNP--PSNLIVSGSFDETIRIWEV-KTGKC-VRMIKAHSMPISSVHFNRDGS--LIVSAS 189
Query: 124 EDGFVQHFDLRSDSATR 140
DG + +D + + +
Sbjct: 190 HDGSCKIWDAKEGTCLK 206
Score = 84 (34.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 35/152 (23%), Positives = 64/152 (42%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH ++ V+F++ G+ L S S DK +I W + Y GH I + + +
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRY-EGHSSGI--SDLAWSS 95
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D ++S D +R+ K L H V+ + P S I+ S D ++
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYEC-LKVLRGHTNFVFCVNFNPPSNLIV-SGSFDETIR 153
Query: 130 HFDLRSDSATRLFYCSSFSENSKQPMNSIRLN 161
+++++ R+ S P++S+ N
Sbjct: 154 IWEVKTGKCVRMIKAHSM------PISSVHFN 179
>ZFIN|ZDB-GENE-030131-6622 [details] [associations]
symbol:wdr48 "WD repeat domain 48" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-6622
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 EMBL:BX284666
EMBL:BC057489 IPI:IPI00498668 RefSeq:NP_999874.1 UniGene:Dr.5219
ProteinModelPortal:Q6PFM9 Ensembl:ENSDART00000056248 GeneID:334682
KEGG:dre:334682 InParanoid:Q6PFM9 OMA:IVQCHIL NextBio:20810509
Bgee:Q6PFM9 Uniprot:Q6PFM9
Length = 677
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 52/198 (26%), Positives = 88/198 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L G+K + ++ N TG ++SGS +K++ WD + K L GH DN+ ++
Sbjct: 164 LSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWDPRTCA-KLMKLKGHTDNV--KSLLLNR 220
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++ S+DG +RL + + + T R+ H V+ L V +I YS G D +
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRV--HDEGVWALQVNEAFTHI-YSGGRDRKIY 277
Query: 130 HFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRK 189
DLR+ R+ C K P+ + L+ DP P V + + + ++
Sbjct: 278 CTDLRNPDM-RVLICEE-----KAPVLRMELDRSA-DP--PQSIWVSTTKSFVNKWSLKA 328
Query: 190 CHWYSPISSDTPVDTFCP 207
H + S D D P
Sbjct: 329 MHNFRA-SGDYDNDCSAP 345
>UNIPROTKB|Q05B17 [details] [associations]
symbol:wdr48 "WD repeat-containing protein 48" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:BC123017
RefSeq:NP_001072858.1 UniGene:Str.41632 ProteinModelPortal:Q05B17
STRING:Q05B17 Ensembl:ENSXETT00000009249 GeneID:780319
KEGG:xtr:780319 Xenbase:XB-GENE-976371 Bgee:Q05B17 Uniprot:Q05B17
Length = 678
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 41/135 (30%), Positives = 68/135 (50%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L G+K + ++ N G +VSGS +K++ WD + +K L GH DN+ ++
Sbjct: 164 LSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTC-QKLMKLKGHTDNV--KALLLNR 220
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++ S+DG +RL + + + T R+ H V+ L V G ++ YS G D +
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRV--HDEGVWALQVNEGFTHV-YSGGRDRKIY 277
Query: 130 HFDLRSDSATRLFYC 144
DLR+ RL C
Sbjct: 278 CTDLRNPDI-RLLIC 291
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 127 (49.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 27 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 86
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 87 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 146
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 147 SVSEDNIMQ 155
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 96 (38.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F ++++S +D L +W K + ++ + H V L+ H
Sbjct: 131 GHDN--WVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 187
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 188 PYVVTGSVDQTVKVW 202
Score = 79 (32.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+HGH V++V GD +VS S DK + W+ + ++ +GH + + R P
Sbjct: 17 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVR--PNQ 73
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPY 117
D I + S D VR+ + + K L +H+ V ++ P S Y
Sbjct: 74 DGTLIASCSNDQTVRVWVV---ATKECKAELREHEHVVECISWAPESSY 119
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 96 (38.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N V+GV F ++++S +D L +W K + ++ + H V L+ H
Sbjct: 134 GHDN--WVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 190
Query: 330 PMFATCGIEKTVKLW 344
P T +++TVK+W
Sbjct: 191 PYVVTGSVDQTVKVW 205
Score = 79 (32.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+HGH V++V GD +VS S DK + W+ + ++ +GH + + R P
Sbjct: 20 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVR--PNQ 76
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTK-RLGKHQGRVYKLAVEPGSPY 117
D I + S D VR+ + + K L +H+ V ++ P S Y
Sbjct: 77 DGTLIASCSNDQTVRVWVV---ATKECKAELREHEHVVECISWAPESSY 122
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 115 (45.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 48/168 (28%), Positives = 72/168 (42%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSY---LSGHLDNIFQTRIMPFTDDRKIITSSADG 81
+G+F+ G D + + K R L GH + R F DD +IITSS D
Sbjct: 108 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR---FLDDNQIITSSGDT 164
Query: 82 QVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYIIYSCGEDGFVQHFDLRSDSATR 140
L I E G+ G H G V L++ P G ++ +C D ++ +D+R DS R
Sbjct: 165 TCALWDI-ETGQQTVGFAG-HSGDVMSLSLAPDGRTFVSGAC--DASIKLWDVR-DSMCR 219
Query: 141 LFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
+ S+ +NA+ P N F G D R++D+R
Sbjct: 220 QTFIGHESD----------INAVAFFP-NGYAFTTGSDDATCRLFDLR 256
Score = 58 (25.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 44 (20.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 315
DL+ +E +YS H N + G+ F + +++G D + IW G ++ G
Sbjct: 254 DLRADQELLMYS-HDN--IICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAG 310
Query: 316 DRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
+ V+ L AT + +K+W
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 115 (45.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 48/168 (28%), Positives = 72/168 (42%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSY---LSGHLDNIFQTRIMPFTDDRKIITSSADG 81
+G+F+ G D + + K R L GH + R F DD +IITSS D
Sbjct: 108 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR---FLDDNQIITSSGDT 164
Query: 82 QVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYIIYSCGEDGFVQHFDLRSDSATR 140
L I E G+ G H G V L++ P G ++ +C D ++ +D+R DS R
Sbjct: 165 TCALWDI-ETGQQTVGFAG-HSGDVMSLSLAPDGRTFVSGAC--DASIKLWDVR-DSMCR 219
Query: 141 LFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
+ S+ +NA+ P N F G D R++D+R
Sbjct: 220 QTFIGHESD----------INAVAFFP-NGYAFTTGSDDATCRLFDLR 256
Score = 58 (25.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 44 (20.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 315
DL+ +E +YS H N + G+ F + +++G D + IW G ++ G
Sbjct: 254 DLRADQELLMYS-HDN--IICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAG 310
Query: 316 DRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
+ V+ L AT + +K+W
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 115 (45.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 48/168 (28%), Positives = 72/168 (42%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSY---LSGHLDNIFQTRIMPFTDDRKIITSSADG 81
+G+F+ G D + + K R L GH + R F DD +IITSS D
Sbjct: 108 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR---FLDDNQIITSSGDT 164
Query: 82 QVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYIIYSCGEDGFVQHFDLRSDSATR 140
L I E G+ G H G V L++ P G ++ +C D ++ +D+R DS R
Sbjct: 165 TCALWDI-ETGQQTVGFAG-HSGDVMSLSLAPDGRTFVSGAC--DASIKLWDVR-DSMCR 219
Query: 141 LFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
+ S+ +NA+ P N F G D R++D+R
Sbjct: 220 QTFIGHESD----------INAVAFFP-NGYAFTTGSDDATCRLFDLR 256
Score = 58 (25.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 44 (20.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 315
DL+ +E +YS H N + G+ F + +++G D + IW G ++ G
Sbjct: 254 DLRADQELLMYS-HDN--IICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAG 310
Query: 316 DRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
+ V+ L AT + +K+W
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 115 (45.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 48/168 (28%), Positives = 72/168 (42%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSY---LSGHLDNIFQTRIMPFTDDRKIITSSADG 81
+G+F+ G D + + K R L GH + R F DD +IITSS D
Sbjct: 108 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR---FLDDNQIITSSGDT 164
Query: 82 QVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYIIYSCGEDGFVQHFDLRSDSATR 140
L I E G+ G H G V L++ P G ++ +C D ++ +D+R DS R
Sbjct: 165 TCALWDI-ETGQQTVGFAG-HSGDVMSLSLAPDGRTFVSGAC--DASIKLWDVR-DSMCR 219
Query: 141 LFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
+ S+ +NA+ P N F G D R++D+R
Sbjct: 220 QTFIGHESD----------INAVAFFP-NGYAFTTGSDDATCRLFDLR 256
Score = 58 (25.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 44 (20.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 315
DL+ +E +YS H N + G+ F + +++G D + IW G ++ G
Sbjct: 254 DLRADQELLMYS-HDN--IICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAG 310
Query: 316 DRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
+ V+ L AT + +K+W
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 115 (45.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 48/168 (28%), Positives = 72/168 (42%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSY---LSGHLDNIFQTRIMPFTDDRKIITSSADG 81
+G+F+ G D + + K R L GH + R F DD +IITSS D
Sbjct: 108 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR---FLDDNQIITSSGDT 164
Query: 82 QVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYIIYSCGEDGFVQHFDLRSDSATR 140
L I E G+ G H G V L++ P G ++ +C D ++ +D+R DS R
Sbjct: 165 TCALWDI-ETGQQTVGFAG-HSGDVMSLSLAPDGRTFVSGAC--DASIKLWDVR-DSMCR 219
Query: 141 LFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
+ S+ +NA+ P N F G D R++D+R
Sbjct: 220 QTFIGHESD----------INAVAFFP-NGYAFTTGSDDATCRLFDLR 256
Score = 58 (25.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
Score = 44 (20.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 315
DL+ +E +YS H N + G+ F + +++G D + IW G ++ G
Sbjct: 254 DLRADQELLMYS-HDN--IICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAG 310
Query: 316 DRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
+ V+ L AT + +K+W
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
>UNIPROTKB|Q2TBM8 [details] [associations]
symbol:WDR26 "WD repeat domain 26" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000160946 HOVERGEN:HBG083958 OMA:IRGQFYQ
OrthoDB:EOG4GHZNV CTD:80232 EMBL:DAAA02042638 EMBL:BC109897
IPI:IPI00702354 RefSeq:NP_001070527.1 UniGene:Bt.21955
Ensembl:ENSBTAT00000034200 GeneID:767999 KEGG:bta:767999
InParanoid:Q2TBM8 NextBio:20918354 Uniprot:Q2TBM8
Length = 514
Score = 121 (47.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 258 DLQKREEPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 316
DLQ R + Y G + T+ F G N++++ SGS+ ++IW K+ + + G
Sbjct: 407 DLQDRVLVRKYQGVTQGFYTIHSC-FGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGH 465
Query: 317 RHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 348
VN + +P IP M A+ + TV++W P P
Sbjct: 466 TRTVNCVSWNPQIPSMMASASDDGTVRIWGPAP 498
Score = 65 (27.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 29/119 (24%), Positives = 47/119 (39%)
Query: 21 EFNSTGDFLVSGSDDKLVIFWDWK-DRR--EKFSYLSGHLDNIFQTRIMPFTDDRKIITS 77
+F++ G L +GS D VI W D + L GH + P DD ++
Sbjct: 215 KFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSP--DDNYLVAC 272
Query: 78 SAD--GQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYI-------IYSCGEDG 126
D ++ L + + G + TK H+ + +A P G ++ Y C DG
Sbjct: 273 GPDDCSELWLWNV-QTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDG 330
Score = 57 (25.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 20/83 (24%), Positives = 34/83 (40%)
Query: 4 INLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWK----DRREKFSYLSGHLDN 59
+ L L GH V+ + ++ ++LV+ D W W + R K S H D+
Sbjct: 244 LKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMS--QSHEDS 301
Query: 60 IFQTRIMPFTDDRKIITSSADGQ 82
+ P D ++ +T GQ
Sbjct: 302 LTSVAWNP--DGKRFVTGGQRGQ 322
>UNIPROTKB|F1PIR1 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:AAEX03005292
RefSeq:XP_003434930.1 ProteinModelPortal:F1PIR1
Ensembl:ENSCAFT00000025923 GeneID:480115 KEGG:cfa:480115
Uniprot:F1PIR1
Length = 514
Score = 121 (47.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 258 DLQKREEPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 316
DLQ R + Y G + T+ F G N++++ SGS+ ++IW K+ + + G
Sbjct: 407 DLQDRVLVRKYQGVTQGFYTIHSC-FGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGH 465
Query: 317 RHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 348
VN + +P IP M A+ + TV++W P P
Sbjct: 466 TRTVNCVSWNPQIPSMMASASDDGTVRIWGPAP 498
Score = 65 (27.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 29/119 (24%), Positives = 47/119 (39%)
Query: 21 EFNSTGDFLVSGSDDKLVIFWDWK-DRR--EKFSYLSGHLDNIFQTRIMPFTDDRKIITS 77
+F++ G L +GS D VI W D + L GH + P DD ++
Sbjct: 215 KFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSP--DDNYLVAC 272
Query: 78 SAD--GQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYI-------IYSCGEDG 126
D ++ L + + G + TK H+ + +A P G ++ Y C DG
Sbjct: 273 GPDDCSELWLWNV-QTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDG 330
Score = 57 (25.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 20/83 (24%), Positives = 34/83 (40%)
Query: 4 INLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWK----DRREKFSYLSGHLDN 59
+ L L GH V+ + ++ ++LV+ D W W + R K S H D+
Sbjct: 244 LKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMS--QSHEDS 301
Query: 60 IFQTRIMPFTDDRKIITSSADGQ 82
+ P D ++ +T GQ
Sbjct: 302 LTSVAWNP--DGKRFVTGGQRGQ 322
>UNIPROTKB|F1P3E7 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ EMBL:AADN02012163 EMBL:AADN02012164
EMBL:AADN02012165 IPI:IPI00585040 Ensembl:ENSGALT00000015154
Uniprot:F1P3E7
Length = 684
Score = 121 (47.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 258 DLQKREEPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 316
DLQ R + Y G + T+ F G N++++ SGS+ ++IW K+ + + G
Sbjct: 577 DLQDRVLVRKYQGVTQGFYTIHSC-FGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGH 635
Query: 317 RHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 348
VN + +P IP M A+ + TV++W P P
Sbjct: 636 TRTVNCVSWNPQIPSMMASASDDGTVRIWGPAP 668
Score = 68 (29.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 29/121 (23%), Positives = 48/121 (39%)
Query: 21 EFNSTGDFLVSGSDDKLVIFW--DWKDRREKF-SYLSGHLDNIFQTRIMPFTDDRKIITS 77
+F++ G L +GS D VI W D + K L GH + P DD ++
Sbjct: 385 KFSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYIAWSP--DDNYLVAC 442
Query: 78 SAD--GQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHFDLRS 135
D ++ L + + G + TK H+ + +A P + G+ G DL
Sbjct: 443 GPDDCSELWLWNV-QTGELRTKMSQSHEDSLTSVAWNPDGKRFVTG-GQRGQFYQCDLNG 500
Query: 136 D 136
+
Sbjct: 501 N 501
Score = 58 (25.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 20/84 (23%), Positives = 35/84 (41%)
Query: 3 RINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWK----DRREKFSYLSGHLD 58
++ L L GH V+ + ++ ++LV+ D W W + R K S H D
Sbjct: 413 QLKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMS--QSHED 470
Query: 59 NIFQTRIMPFTDDRKIITSSADGQ 82
++ P D ++ +T GQ
Sbjct: 471 SLTSVAWNP--DGKRFVTGGQRGQ 492
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 113 (44.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 35/133 (26%), Positives = 58/133 (43%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+G V +F+ G L S D+L++ W+ E ++ L GH + + T
Sbjct: 52 LSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYN--T 109
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++S D V + E G KRL H V P + + +DG V+
Sbjct: 110 DGSLLFSASTDKTVCVWDS-ETGER-VKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVK 167
Query: 130 HFDLRSDSATRLF 142
+D+R ++ F
Sbjct: 168 LWDIRKKASVHTF 180
Score = 68 (29.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 24/104 (23%), Positives = 45/104 (43%)
Query: 262 REEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVN 321
R++ V++ +N+ V V F +D+ + G D + +W + KL+ M G V
Sbjct: 172 RKKASVHT-FQNTYQVLSVTFNDTSDQIISGGID-NDIKVWDLRQNKLIYSMQGHGDSVT 229
Query: 322 QLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKAN 365
L + ++ +V++W P F P + KI + N
Sbjct: 230 GLSLSADGSYLLSNSMDNSVRVWDIRP--FAP-KERCVKIFQGN 270
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 146 (56.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 80/353 (22%), Positives = 140/353 (39%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH G V ++ F+ G L SGS D + WD E GH +I+ P
Sbjct: 788 LDGHSGTVESLAFSPDGKLLASGSYDNTIDLWD-SATGELLQTFEGHPHSIWSVAFAP-- 844
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D +++ ++S D +++ + G + + L H V +A P ++ S D ++
Sbjct: 845 DGKELASASDDSTIKIWDL-ATGELQ-QTLDSHSQSVRSVAFSPDGK-LLASSSLDSTIK 901
Query: 130 HF-----DLRSDSATRLFYCSS--FSENSKQPMNSIRLNAIVI-DPRNPNYFAV--GGSD 179
+ +L+ R + S FS + K+ + N + + +P G S
Sbjct: 902 VWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQ 961
Query: 180 EYARVYDIRKCHWYSPISSDTPVDTFCP-----RHLIGKNNIHITGLAYSNTSELLISYN 234
V + SSDT + + + +++ I +A+S + L+S +
Sbjct: 962 SVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGS 1021
Query: 235 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS 294
D+ K L S L S ED H S++V V F P+D+ + S S
Sbjct: 1022 DDNTI---KLWDLATSELQQSLED------------H--SRSVHAVAF-SPDDKQLASSS 1063
Query: 295 DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPM 347
+ +W G+L R + G V + P + A+ + T+KLW P+
Sbjct: 1064 LDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPL 1116
Score = 135 (52.6 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 76/350 (21%), Positives = 139/350 (39%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L G G V +V F+ G L SGS+ V W+ E L GH ++ P
Sbjct: 914 LEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWN-PATGELLQTLEGHSQSVRSVAFSP-- 970
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D +++ +SS+D ++L G + G H + +A P +++ S +D ++
Sbjct: 971 DGKQLASSSSDTTIKLWNS-TTGELQQTFKG-HDLWIRAVAFSPDGKHLV-SGSDDNTIK 1027
Query: 130 HFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRK 189
+DL + + S ++S+ ++A+ P + A D +++D
Sbjct: 1028 LWDLATSELQQ-----SLEDHSRS------VHAVAFSP-DDKQLASSSLDSTIKLWDSAT 1075
Query: 190 CHWYSPI---SSDTPVDTFCPR-HLIGKNNIHITGLAYSN-TSELLISYN------DELV 238
+ S TF P L+ N+ T ++ T EL + D +
Sbjct: 1076 GELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVA 1135
Query: 239 YLFE-KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG 297
+ + K + G ++ D E Q GH S ++ V F P+ + + SGS
Sbjct: 1136 FSPDGKQLASGYYDSTIKLWDSATGELLQTLEGH--SDRIQSV-VFSPDGKLLASGSYDQ 1192
Query: 298 HLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPM 347
+W G+L+++ G V + P + A+ +T+KLW P+
Sbjct: 1193 TAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPV 1242
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 107 (42.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 38/131 (29%), Positives = 59/131 (45%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPF 68
+L GH V V F+ +GD+LVS S D WD E GH + IF P
Sbjct: 260 RLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQ-EGHSEGIFSIACQP- 317
Query: 69 TDDRKIITSSADGQVRLGQIFE--DGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDG 126
D +++S G +G+I++ G+ L +H ++ +A P Y + + D
Sbjct: 318 --DGSLVSSG--GNDAIGRIWDLRSGK-SIMVLDEHIRQIVAMAWSPNG-YQLATSSADD 371
Query: 127 FVQHFDLRSDS 137
V+ +DLR S
Sbjct: 372 TVKIWDLRKVS 382
Score = 89 (36.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 44/195 (22%), Positives = 80/195 (41%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
+++ L G G + + V F++ G+ SGS V W+ D + GH D +
Sbjct: 159 LQKAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWN-SDNLSEVQLFRGHTDRV 217
Query: 61 FQTRIMPF-------TDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP 113
P ++ + T +AD V L + + + RL H RV ++A P
Sbjct: 218 SGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPL--LRLEGHLARVGRVAFHP 275
Query: 114 GSPYIIYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYF 173
Y++ + F D+ RL+ + E Q +S + +I P + +
Sbjct: 276 SGDYLVSA----SF--------DTTWRLWDVHTGVELLMQEGHSEGIFSIACQP-DGSLV 322
Query: 174 AVGGSDEYARVYDIR 188
+ GG+D R++D+R
Sbjct: 323 SSGGNDAIGRIWDLR 337
Score = 78 (32.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 26/91 (28%), Positives = 39/91 (42%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFF--GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 315
DL+K H S V V + G N SG D G + +W L++ MVG
Sbjct: 377 DLRKVSLAHTIPAH--SSLVSDVRYIESGVNRFIATSGYD-GCVKLWNPLNCSLIKSMVG 433
Query: 316 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAP 346
V ++ + F + G ++T+KLW P
Sbjct: 434 HEEKVMSVDGYGD--RFISSGYDRTIKLWYP 462
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 114 (45.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 33/132 (25%), Positives = 68/132 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
++ HKG V ++ F+S G ++ S S D ++ + + E L GH + + Q + +
Sbjct: 33 INSHKGEVYSINFSSDGKYIASSSFDMTIMVHNVYNECETIGVLRGHKNAVLQAKWLQ-- 90
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
DD I ++SAD ++ L + + ++ + + G H V L + + ++ SC +D ++
Sbjct: 91 DDNYICSASADHKLFLWDVECESKLRSFK-G-HDNIVNGLDIINHNLFV--SCSDDNTLK 146
Query: 130 HFDLRSDSATRL 141
+D+RS A +
Sbjct: 147 FWDIRSKWAVHI 158
Score = 65 (27.9 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 34/134 (25%), Positives = 60/134 (44%)
Query: 211 IGKNNIHITGLAYSNTSELLISYN-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS 269
IG + +ITGL + +L S + DE + ++ P S + L + P+ Y+
Sbjct: 201 IGHKD-YITGLDINKDETMLASISADESICFWDIQ------PFSCEEKLLFQLNSPK-YN 252
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
N +K ++F ND + GS +L+I+ K L + G +N + HP
Sbjct: 253 IDYN--LIK-LSF--NNDNLLACGSGDNYLYIYDYKQKILKYSLPGHTSTINDVAFHPVE 307
Query: 330 PMFATCGIEKTVKL 343
+ A+C + T+ L
Sbjct: 308 DIVASCSSDHTIFL 321
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 103 (41.3 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 29/103 (28%), Positives = 54/103 (52%)
Query: 17 VNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD-RKII 75
V + F+ G +LV+G++D+ + WD ++ ++ + SGH +I+ + F+ + R I+
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVF-SGHEQDIYS---LDFSHNGRFIV 418
Query: 76 TSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYI 118
+ S D RL + E G+ K L G V +A+ P +I
Sbjct: 419 SGSGDRTARLWDV-ETGQCILK-LEIENG-VTAIAISPNDQFI 458
Score = 84 (34.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 26/98 (26%), Positives = 43/98 (43%)
Query: 285 PNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
PND+++ GS + +W G LV + G + V + P + + ++KT+K+W
Sbjct: 453 PNDQFIAVGSLDQIIRVWSVSG-TLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVW 511
Query: 345 APMPTDFPPLPD-NAEKIMKANKQGREDHS-RITLTPD 380
T L E I KA G D + ++PD
Sbjct: 512 ELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPD 549
Score = 62 (26.9 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 27/132 (20%), Positives = 57/132 (43%)
Query: 218 ITGLAYSNTSELLISYN-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQT 276
+ +A+S S +L+S + D+ + ++E ++ PE + K Y+GH +
Sbjct: 487 VYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKA----TYTGHTDFVL 542
Query: 277 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG 336
V+ P+ + +SGS + W + G+ G ++ V + P FA+
Sbjct: 543 SVAVS---PDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGS 599
Query: 337 IEKTVKLWAPMP 348
+ ++W+ P
Sbjct: 600 GDLRARIWSIDP 611
>DICTYBASE|DDB_G0277955 [details] [associations]
symbol:nup43 "nucleoporin 43" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0277955 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GenomeReviews:CM000152_GR GO:GO:0015031
EMBL:AAFI02000023 GO:GO:0031965 GO:GO:0005643 GO:GO:0051028
RefSeq:XP_642030.1 ProteinModelPortal:Q54Z22 PRIDE:Q54Z22
EnsemblProtists:DDB0235245 GeneID:8621241 KEGG:ddi:DDB_G0277955
eggNOG:NOG270547 InParanoid:Q54Z22 KO:K14305 OMA:INRLICC
Uniprot:Q54Z22
Length = 417
Score = 138 (53.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 17 VNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREK-FSYLSGHLDNIFQTRIMPFTDDRKII 75
VN V+ ++ + SG + + FWD + + + IF I D++ II
Sbjct: 236 VNVVKSITSNQIITSGELGRYIKFWDIRSNSSQPVKTIKTQCPRIFSLAI--HKDEQHII 293
Query: 76 TS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHFDLR 134
+ S+DGQV L I D +D + H V++L+ +P +YSC EDGF+ +
Sbjct: 294 AAGSSDGQVNLFDIRNDYSIDQNKT--HNSNVWELSFSKSNPNQLYSCSEDGFIYQYSYN 351
Query: 135 SDS 137
D+
Sbjct: 352 KDN 354
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 126 (49.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPF 68
+L GH G + +FNS G ++ SGS D+ ++ W E + LSGH I + +
Sbjct: 55 ELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGDCENYGILSGHRGAILD---LQW 111
Query: 69 TDDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGF 127
+ D II S SAD + + R+ +R H+ + L + I++S +DG
Sbjct: 112 SRDSDIIFSASADMHLASWDLTTGERI--RRYVGHEEVINSLDISKRGEEILFSGSDDGT 169
Query: 128 VQHFDLRSDSA 138
+ +D R A
Sbjct: 170 IGIWDPRKKHA 180
Score = 52 (23.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 14/64 (21%), Positives = 25/64 (39%)
Query: 290 VMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT 349
+ SG + +W + +V M G R + L+ P + ++ T + W P
Sbjct: 202 IYSGGIDNDIKVWDVRKKAVVYNMAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIRP- 260
Query: 350 DFPP 353
F P
Sbjct: 261 -FAP 263
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 111 (44.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH V V F+ +++S SDD+ + W+W++R+E + L+GH + + P T
Sbjct: 91 LTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKE-IACLTGHNHFVMCAQFHP-T 148
Query: 70 DDRKIITSSADGQVRLGQI 88
DD I+++S D +R+ I
Sbjct: 149 DDL-IVSASLDETIRIWDI 166
Score = 82 (33.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 278 KGVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKL--VRLMVGDRHVVNQLEPHPHIPMFA 333
+GVN+ F P ++SGSD + +W+ K V G + V+ + HPH +
Sbjct: 210 RGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLII 269
Query: 334 TCGIEKTVKLW 344
+ G +KT+++W
Sbjct: 270 SVGEDKTLRVW 280
>ASPGD|ASPL0000062656 [details] [associations]
symbol:AN0808 species:162425 "Emericella nidulans"
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 EMBL:AACD01000013
KO:K14961 HOGENOM:HOG000204856 OMA:VNRLQWN OrthoDB:EOG4PP1RS
RefSeq:XP_658412.1 ProteinModelPortal:Q5BF72 STRING:Q5BF72
EnsemblFungi:CADANIAT00001853 GeneID:2876584 KEGG:ani:AN0808.2
Uniprot:Q5BF72
Length = 477
Score = 102 (41.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 42/171 (24%), Positives = 76/171 (44%)
Query: 224 SNTSELLISYNDELV--YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVN 281
SN +LL++ +D ++ L LG + L P +++ + E + + N + V
Sbjct: 229 SNGRDLLVNSSDRVIRTILMPDLSQLG---IDLEPTNIKLQVEHK-FQDVVNRLSWNHVA 284
Query: 282 FFGPNDEYVMSGSDCG-HLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEK- 339
F E+V + + +++W++ G LV+++ G R + +E HP P CG+E
Sbjct: 285 F-SSTGEFVTASTFMNPDIYVWERSHGSLVKILEGPREELGVVEWHPTRPFVVACGLESG 343
Query: 340 TVKLWAPM-PTDFPPL-PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 388
+ W+ + P + L PD E RED + P +H RL
Sbjct: 344 CIYTWSIVTPQKWSALAPDFGEVEENVIYVEREDE--FDIHPAEEIHQRRL 392
Score = 82 (33.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 33/109 (30%), Positives = 50/109 (45%)
Query: 6 LCGKLH-GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTR 64
L KL GH C+ FN GD+L SG D V+ +D + L GH+ I Q+
Sbjct: 19 LSEKLRSGHATCLR---FNRKGDYLASGRVDGTVVIFD-VETNGVARKLKGHIRQI-QS- 72
Query: 65 IMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP 113
+ D R +++SS D + L + + R+ T R + VY + P
Sbjct: 73 LSWSRDGRYLLSSSQDWKCILWDLKDGSRVRTVRF---EAPVYIAELHP 118
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 99 (39.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 37/141 (26%), Positives = 63/141 (44%)
Query: 206 CPRHLIGKNNIHITGLAYSNTSELLISYN-DELVYLFEKNMGLGPSPLSLSPEDLQKREE 264
C L G +I IT LA S L+S + D V +F+ P + + LQ
Sbjct: 211 CSHVLKGHKDI-ITSLAISKDGSSLLSNSMDNTVRIFDVK------PFASAQRQLQ---- 259
Query: 265 PQVYSG--HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQ 322
++ G H + GV + N +V +GS ++++W G L ++ G VN
Sbjct: 260 --IFEGAIHGQEHNLLGVAW-SRNSRFVGAGSSDKNVYVWSATGD-LRYVLPGHEGSVNH 315
Query: 323 LEPHPHIPMFATCGIEKTVKL 343
++ HPH + +C ++T+ L
Sbjct: 316 VDFHPHQDIILSCSSDRTIFL 336
Score = 81 (33.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPF 68
++ GH V F+ +G + SG D+ ++ W+ + + L+G I T +
Sbjct: 45 QMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNYGVLNGCKGAI--TDLQWS 102
Query: 69 TDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
D R + SS+D + G+ K G H G V L V ++ S +D +
Sbjct: 103 RDSRVVYCSSSDTHLMSWDAVS-GQKIRKHKG-HAGVVNALDVLKVGSELLTSVSDDCTM 160
Query: 129 QHFDLRS 135
+ +D RS
Sbjct: 161 KVWDSRS 167
Score = 58 (25.5 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 28/155 (18%), Positives = 70/155 (45%)
Query: 8 GKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMP 67
G L+G KG + ++++ + S D ++ WD +K GH + ++
Sbjct: 87 GVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSG-QKIRKHKGHAGVVNALDVLK 145
Query: 68 FTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAV-EPGSPYIIYSCGEDG 126
+ ++TS +D ++++ D + + + + +A+ + G+ ++ G DG
Sbjct: 146 VGSE--LLTSVSDDCTM--KVWDSRSKDCIKTIEEKYPLTAVAIAQQGTQ--VFIGGIDG 199
Query: 127 FVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLN 161
++ +DLR++ +CS + K + S+ ++
Sbjct: 200 AIKIWDLRNN------HCSHVLKGHKDIITSLAIS 228
>UNIPROTKB|F1S8S6 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:CU927957
RefSeq:XP_003357688.1 UniGene:Ssc.21945 Ensembl:ENSSSCT00000011871
GeneID:100523327 KEGG:ssc:100523327 Uniprot:F1S8S6
Length = 660
Score = 121 (47.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 258 DLQKREEPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 316
DLQ R + Y G + T+ F G N++++ SGS+ ++IW K+ + + G
Sbjct: 553 DLQDRVLVRKYQGVTQGFYTIHSC-FGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGH 611
Query: 317 RHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 348
VN + +P IP M A+ + TV++W P P
Sbjct: 612 TRTVNCVSWNPQIPSMMASASDDGTVRIWGPAP 644
Score = 65 (27.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 29/119 (24%), Positives = 47/119 (39%)
Query: 21 EFNSTGDFLVSGSDDKLVIFWDWK-DRR--EKFSYLSGHLDNIFQTRIMPFTDDRKIITS 77
+F++ G L +GS D VI W D + L GH + P DD ++
Sbjct: 361 KFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSP--DDNYLVAC 418
Query: 78 SAD--GQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYI-------IYSCGEDG 126
D ++ L + + G + TK H+ + +A P G ++ Y C DG
Sbjct: 419 GPDDCSELWLWNV-QTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDG 476
Score = 57 (25.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 20/83 (24%), Positives = 34/83 (40%)
Query: 4 INLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWK----DRREKFSYLSGHLDN 59
+ L L GH V+ + ++ ++LV+ D W W + R K S H D+
Sbjct: 390 LKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMS--QSHEDS 447
Query: 60 IFQTRIMPFTDDRKIITSSADGQ 82
+ P D ++ +T GQ
Sbjct: 448 LTSVAWNP--DGKRFVTGGQRGQ 468
>UNIPROTKB|Q9H7D7 [details] [associations]
symbol:WDR26 "WD repeat-containing protein 26" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV EMBL:AB209887
EMBL:AC099790 EMBL:BC031471 EMBL:BC034498 EMBL:BC052301
EMBL:BC063817 EMBL:AY221751 EMBL:AY304473 EMBL:AF130049
EMBL:EF011612 EMBL:AK024669 IPI:IPI00414197 IPI:IPI00645819
IPI:IPI00646469 IPI:IPI00829602 RefSeq:NP_001108585.2
RefSeq:NP_079436.4 UniGene:Hs.497873 UniGene:Hs.729289
ProteinModelPortal:Q9H7D7 SMR:Q9H7D7 IntAct:Q9H7D7 STRING:Q9H7D7
PhosphoSite:Q9H7D7 DMDM:134047967 PaxDb:Q9H7D7 PRIDE:Q9H7D7
Ensembl:ENST00000295024 Ensembl:ENST00000366852
Ensembl:ENST00000414423 GeneID:80232 KEGG:hsa:80232 UCSC:uc001hop.4
UCSC:uc001hoq.4 UCSC:uc021pjt.1 CTD:80232 GeneCards:GC01M224573
HGNC:HGNC:21208 HPA:HPA028539 neXtProt:NX_Q9H7D7
PharmGKB:PA134907873 InParanoid:Q9H7D7 ChiTaRS:WDR26
GenomeRNAi:80232 NextBio:70673 ArrayExpress:Q9H7D7 Bgee:Q9H7D7
CleanEx:HS_WDR26 Genevestigator:Q9H7D7 GermOnline:ENSG00000162923
Uniprot:Q9H7D7
Length = 661
Score = 121 (47.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 258 DLQKREEPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 316
DLQ R + Y G + T+ F G N++++ SGS+ ++IW K+ + + G
Sbjct: 554 DLQDRVLVRKYQGVTQGFYTIHSC-FGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGH 612
Query: 317 RHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 348
VN + +P IP M A+ + TV++W P P
Sbjct: 613 TRTVNCVSWNPQIPSMMASASDDGTVRIWGPAP 645
Score = 65 (27.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 29/119 (24%), Positives = 47/119 (39%)
Query: 21 EFNSTGDFLVSGSDDKLVIFWDWK-DRR--EKFSYLSGHLDNIFQTRIMPFTDDRKIITS 77
+F++ G L +GS D VI W D + L GH + P DD ++
Sbjct: 362 KFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSP--DDNYLVAC 419
Query: 78 SAD--GQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYI-------IYSCGEDG 126
D ++ L + + G + TK H+ + +A P G ++ Y C DG
Sbjct: 420 GPDDCSELWLWNV-QTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDG 477
Score = 57 (25.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 20/83 (24%), Positives = 34/83 (40%)
Query: 4 INLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWK----DRREKFSYLSGHLDN 59
+ L L GH V+ + ++ ++LV+ D W W + R K S H D+
Sbjct: 391 LKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMS--QSHEDS 448
Query: 60 IFQTRIMPFTDDRKIITSSADGQ 82
+ P D ++ +T GQ
Sbjct: 449 LTSVAWNP--DGKRFVTGGQRGQ 469
>UNIPROTKB|E1C6T8 [details] [associations]
symbol:EIF3I "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006413 KO:K03246 CTD:8668
GeneTree:ENSGT00630000089849 OMA:ATVAGWS EMBL:AADN02043770
IPI:IPI00580489 RefSeq:NP_001157867.1 UniGene:Gga.7902
ProteinModelPortal:E1C6T8 PRIDE:E1C6T8 Ensembl:ENSGALT00000005281
GeneID:419653 KEGG:gga:419653 NextBio:20822680 Uniprot:E1C6T8
Length = 325
Score = 107 (42.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 37/132 (28%), Positives = 57/132 (43%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ + +++N GD L + + D +V W + E+ +GH ++ +
Sbjct: 6 LQGHERSITQIKYNREGDLLFTVAKDPIVNVW-YSVNGERLGTYNGHTGAVWC--VDADW 62
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSC----GED 125
D R ++T SAD RL E G+ L K V + G I++S G
Sbjct: 63 DTRHVLTGSADNSCRLWDC-ETGKQ--LALVKTSSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 126 GFVQHFDLRSDS 137
FV FDLR S
Sbjct: 120 CFVSFFDLRDPS 131
Score = 71 (30.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 20/89 (22%), Positives = 41/89 (46%)
Query: 256 PEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 315
P ++ E P + +S+ V +GP E++++G + G L + K G+ + +
Sbjct: 130 PSQIENNE-PYMKIPCSDSKITSAV--WGPLGEFIIAGHESGELNQFSAKSGEQLSNIKE 186
Query: 316 DRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
+N ++ + MF T + T KL+
Sbjct: 187 HTKQINDIQTSRDMTMFITASKDNTAKLF 215
>RGD|1565589 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1565589 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 IPI:IPI00767527 PRIDE:F1LTR1
Ensembl:ENSRNOT00000005059 Uniprot:F1LTR1
Length = 622
Score = 121 (47.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 258 DLQKREEPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 316
DLQ R + Y G + T+ F G N++++ SGS+ ++IW K+ + + G
Sbjct: 515 DLQDRVLVRKYQGVTQGFYTIHSC-FGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGH 573
Query: 317 RHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 348
VN + +P IP M A+ + TV++W P P
Sbjct: 574 TRTVNCVSWNPQIPSMMASASDDGTVRIWGPAP 606
Score = 64 (27.6 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 30/119 (25%), Positives = 47/119 (39%)
Query: 21 EFNSTGDFLVSGSDDKLVIFW--DWKDRREKF-SYLSGHLDNIFQTRIMPFTDDRKIITS 77
+F++ G L +GS D VI W D K L GH + P DD ++
Sbjct: 323 KFSNDGTKLATGSKDTTVIVWQVDADTHLLKLLKTLEGHAYGVSYIAWSP--DDSYLVAC 380
Query: 78 SAD--GQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYI-------IYSCGEDG 126
D ++ L + + G + TK H+ + +A P G ++ Y C DG
Sbjct: 381 GPDDCSELWLWNV-QTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDG 438
Score = 56 (24.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 20/83 (24%), Positives = 33/83 (39%)
Query: 4 INLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWK----DRREKFSYLSGHLDN 59
+ L L GH V+ + ++ +LV+ D W W + R K S H D+
Sbjct: 352 LKLLKTLEGHAYGVSYIAWSPDDSYLVACGPDDCSELWLWNVQTGELRTKMS--QSHEDS 409
Query: 60 IFQTRIMPFTDDRKIITSSADGQ 82
+ P D ++ +T GQ
Sbjct: 410 LTSVAWNP--DGKRFVTGGQRGQ 430
>UNIPROTKB|P73594 [details] [associations]
symbol:slr1409 "Uncharacterized WD repeat-containing
protein slr1409" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S77304 RefSeq:NP_440958.1
RefSeq:YP_005651017.1 ProteinModelPortal:P73594 STRING:P73594
GeneID:12255183 GeneID:954268 KEGG:syn:slr1409 KEGG:syy:SYNGTS_1064
PATRIC:23839190 OMA:CCNFSPQ ProtClustDB:CLSK501008 Uniprot:P73594
Length = 326
Score = 113 (44.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 37/130 (28%), Positives = 60/130 (46%)
Query: 3 RINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQ 62
++NL + G +N + F+ G FL++ + D + W K+ E L G +F
Sbjct: 38 KLNLERQFTGSDVAINRIHFSPDGQFLLTAAADGVGTLWT-KEG-EMLGQLQGQKPPMFN 95
Query: 63 TRIMPFTDDRKI-ITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYS 121
R+ P DR+I IT+ DG +RL + G + + H+ V P S II +
Sbjct: 96 ARLSP---DRQILITTGYDGTIRLWNL--QGEL-LEEQQPHRAAVADAIFSPDSQ-IIVT 148
Query: 122 CGEDGFVQHF 131
C +DG + F
Sbjct: 149 CSDDGQTKIF 158
Score = 64 (27.6 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 17/68 (25%), Positives = 28/68 (41%)
Query: 277 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG 336
+ VNF PN E +++ G +W G + V VN + +P AT
Sbjct: 215 INNVNF-SPNGEQLLTSGINGSAKLWNLAGELIHEYKVVPTGWVNSAQFYPKGEWLATAS 273
Query: 337 IEKTVKLW 344
+ T++ W
Sbjct: 274 DDGTIRFW 281
Score = 57 (25.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 283 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 342
+ P + S SD G L + G K+ R + + +N + P+ T GI + K
Sbjct: 179 YHPQGLLIASVSDSGSLHLINPNG-KIEREISTGQGRINNVNFSPNGEQLLTSGINGSAK 237
Query: 343 LW 344
LW
Sbjct: 238 LW 239
Score = 51 (23.0 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 277 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 312
V F+ P E++ + SD G + W+K G + L
Sbjct: 257 VNSAQFY-PKGEWLATASDDGTIRFWQKDGQLIYEL 291
>MGI|MGI:1923825 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1923825 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV
CTD:80232 ChiTaRS:WDR26 EMBL:AC113084 EMBL:AK075743 EMBL:AK167116
EMBL:AK167017 EMBL:BC020044 EMBL:BC058601 IPI:IPI00226275
RefSeq:NP_663489.4 UniGene:Mm.289082 ProteinModelPortal:Q8C6G8
SMR:Q8C6G8 IntAct:Q8C6G8 STRING:Q8C6G8 PhosphoSite:Q8C6G8
PaxDb:Q8C6G8 PRIDE:Q8C6G8 Ensembl:ENSMUST00000162819 GeneID:226757
KEGG:mmu:226757 InParanoid:Q8C6G8 NextBio:378339 Bgee:Q8C6G8
CleanEx:MM_WDR26 Genevestigator:Q8C6G8
GermOnline:ENSMUSG00000038733 Uniprot:Q8C6G8
Length = 641
Score = 121 (47.7 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 258 DLQKREEPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 316
DLQ R + Y G + T+ F G N++++ SGS+ ++IW K+ + + G
Sbjct: 534 DLQDRVLVRKYQGVTQGFYTIHSC-FGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGH 592
Query: 317 RHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 348
VN + +P IP M A+ + TV++W P P
Sbjct: 593 TRTVNCVSWNPQIPSMMASASDDGTVRIWGPAP 625
Score = 64 (27.6 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/119 (24%), Positives = 47/119 (39%)
Query: 21 EFNSTGDFLVSGSDDKLVIFWDWK-DRR--EKFSYLSGHLDNIFQTRIMPFTDDRKIITS 77
+F++ G L +GS D VI W D + L GH + P DD ++
Sbjct: 342 KFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSP--DDSYLVAC 399
Query: 78 SAD--GQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYI-------IYSCGEDG 126
D ++ L + + G + TK H+ + +A P G ++ Y C DG
Sbjct: 400 GPDDCSELWLWNV-QTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDG 457
Score = 56 (24.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 20/83 (24%), Positives = 33/83 (39%)
Query: 4 INLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWK----DRREKFSYLSGHLDN 59
+ L L GH V+ + ++ +LV+ D W W + R K S H D+
Sbjct: 371 LKLLKTLEGHAYGVSYIAWSPDDSYLVACGPDDCSELWLWNVQTGELRTKMS--QSHEDS 428
Query: 60 IFQTRIMPFTDDRKIITSSADGQ 82
+ P D ++ +T GQ
Sbjct: 429 LTSVAWNP--DGKRFVTGGQRGQ 449
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 102 (41.0 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 33/127 (25%), Positives = 63/127 (49%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+ GH G V +V F+ + ++ +GS D+ + WD K + L+GH++ Q R + +
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLT-LTGHIE---QVRGLAVS 227
Query: 70 DDRKIITSSADG-QVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
+ + S+ D QV+ + E ++ G H VY LA+ P ++ + G D
Sbjct: 228 NRHTYMFSAGDDKQVKCWDL-EQNKVIRSYHG-HLSGVYCLALHPTLD-VLLTGGRDSVC 284
Query: 129 QHFDLRS 135
+ +D+R+
Sbjct: 285 RVWDIRT 291
Score = 81 (33.6 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 26/87 (29%), Positives = 39/87 (44%)
Query: 262 REEPQVY--SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHV 319
R + Q++ SGH N TV V F P D V++GS + W + GK + + +
Sbjct: 290 RTKMQIFALSGHDN--TVCSV-FTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKS 346
Query: 320 VNQLEPHPHIPMFATCGIEKTVKLWAP 346
V + HP FA+ + T K P
Sbjct: 347 VRAMTLHPKENAFASASADNTKKFSLP 373
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 106 (42.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 39/158 (24%), Positives = 72/158 (45%)
Query: 210 LIGKNNIHI-TGLAYSNTSELLISYNDELV---YLFEKNMGLGPSPLSLSPEDLQKREEP 265
+ ++N+ I G E+ I YNDE++ Y+ + N+ + + + DL +
Sbjct: 360 ITSEHNLLIYNGKTLERQGEI-IGYNDEIIDIKYINDDNIIVATNSNEIKTYDLNTKRA- 417
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVN--QL 323
QV GH + V V+ + ++++SGS IW + + + + G V++ L
Sbjct: 418 QVLRGHED--LVMSVDV-SADGKHIISGSRDKSAMIWDLEKKESIAQLTGHTGVISCVAL 474
Query: 324 EPHPHIPMFA-TCGIEKTVKLWAPMPTDFPPLPDNAEK 360
P MFA T ++T+KLW T D+++K
Sbjct: 475 PKKPSTSMFAITASDDRTIKLWKGFSTTSSSGGDDSKK 512
Score = 83 (34.3 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 28/124 (22%), Positives = 56/124 (45%)
Query: 12 GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD 71
GH+G +N ++ +S+G+ + S S DK V WD + + ++ H D + + P
Sbjct: 127 GHEGPINEIDIHSSGNIVASASSDKTVKVWDLE--KGYCTHNFQHDDVVTMLKFHPTL-- 182
Query: 72 RKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHF 131
K++T D +R +++ + L H ++ + +I S G D + +
Sbjct: 183 LKLVTVCLDLNIR---VYDLVTKECVILTNHLSQISGITFSNSGKELI-SSGRDKVLNVW 238
Query: 132 DLRS 135
D+ S
Sbjct: 239 DMLS 242
Score = 63 (27.2 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 7 CGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREK 49
C L H ++ + F+++G L+S DK++ WD + K
Sbjct: 204 CVILTNHLSQISGITFSNSGKELISSGRDKVLNVWDMLSKNPK 246
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 100 (40.3 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 325
++Y+GH + V V F PN Y+ +GS + +W + G VRL G R V L
Sbjct: 432 RLYAGHLSD--VDCVKFH-PNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAF 488
Query: 326 HPHIPMFATCGIEKTVKLW 344
P+ A+ G ++ +KLW
Sbjct: 489 SPNGKYLASAGEDQRLKLW 507
Score = 87 (35.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 37/134 (27%), Positives = 54/134 (40%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH G V F + L+S S+D V +WD K Y GH ++ + P +
Sbjct: 350 LRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLY-RGHAYPVWDVDVSPCS 408
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
T+S D R +++ R RL H V + P S YI D V
Sbjct: 409 --LYFSTASHD---RTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATG-STDKTV 462
Query: 129 QHFDLRSDSATRLF 142
+ + R ++ RLF
Sbjct: 463 RLWSTRQGASVRLF 476
Score = 85 (35.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 32/126 (25%), Positives = 57/126 (45%)
Query: 17 VNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDRKIIT 76
+N E ++ L +G D+ V W + R+ K H ++ + R+ D ++
Sbjct: 283 LNTAEVSADSRLLAAGFDNSAVKLWSLRARKLK---AGPHKADVSKIRLA--CD---VLE 334
Query: 77 SSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHFDLRSD 136
AD + G + K L H G VY+ A + ++ SC ED V+++DL+S
Sbjct: 335 EEADDEDASGS-------EIKTLRGHSGPVYRTAFLTDASGLL-SCSEDSTVRYWDLKSF 386
Query: 137 SATRLF 142
+ T L+
Sbjct: 387 TNTVLY 392
Score = 80 (33.2 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 18/79 (22%), Positives = 36/79 (45%)
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 325
++++GHR F PN +Y+ S + L +W G L + + G ++ L
Sbjct: 474 RLFTGHRGPVLTLA---FSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSF 530
Query: 326 HPHIPMFATCGIEKTVKLW 344
+ A+ ++ TV++W
Sbjct: 531 SQDSSLVASASMDNTVRVW 549
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 169 NPNYFAVGGSDEYARVYDIRK 189
N NY A G +D+ R++ R+
Sbjct: 449 NSNYIATGSTDKTVRLWSTRQ 469
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 94 (38.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 35/134 (26%), Positives = 55/134 (41%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH G V + F+ GDF++S S D + W K Y GH ++ + PF
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCY-KGHNYPVWDAQFSPF- 471
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
+ S D R +I+ R+ R+ H V + P YI D V
Sbjct: 472 -GHYFASCSHD---RTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATG-SSDKTV 526
Query: 129 QHFDLRSDSATRLF 142
+ +D+++ R+F
Sbjct: 527 RLWDVQTGECVRIF 540
Score = 92 (37.4 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 37/147 (25%), Positives = 60/147 (40%)
Query: 248 GPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG 307
G S ++ D+Q E +++ GHR+ ++ P+ Y+ SG + G + +W
Sbjct: 520 GSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMS---PDGRYMASGDEDGTIMMWDLSTA 576
Query: 308 KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQ 367
+ + ++G V L + A+ + TVKLW T L EK +N
Sbjct: 577 RCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV--TSSTKLTKAEEKNGNSN-- 632
Query: 368 GREDHSRITLTPDVIMHVLRLQRRQTL 394
R R T +H LR RR L
Sbjct: 633 -RLRSLRTFPTKSTPVHALRFSRRNLL 658
>ZFIN|ZDB-GENE-061110-55 [details] [associations]
symbol:zgc:153492 "zgc:153492" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-061110-55 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR021772 Pfam:PF11816
GeneTree:ENSGT00520000055738 EMBL:CABZ01090140 EMBL:CU633479
IPI:IPI00509466 Ensembl:ENSDART00000105610 Bgee:F1R8P7
Uniprot:F1R8P7
Length = 524
Score = 137 (53.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 45/160 (28%), Positives = 75/160 (46%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L G+K + ++ N G +VSGS +K++ WD + K L GH DN+ ++
Sbjct: 163 LSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCA-KLMKLKGHTDNV--KSLLLNR 219
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++ S+DG +RL + + + T R+ H V+ L V ++ YS G D +
Sbjct: 220 DGTQCLSGSSDGTIRLWSLGQQRCIATYRV--HDEGVWALQVNEAFTHV-YSGGRDRKIY 276
Query: 130 HFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRN 169
DLR+ R+ C K P+ + L+ DP N
Sbjct: 277 CTDLRNPDI-RVLICEE-----KAPVLKMELDRSA-DPHN 309
>CGD|CAL0005182 [details] [associations]
symbol:orf19.5413 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005182 GO:GO:0005737 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
GO:GO:0007049 EMBL:AACQ01000051 EMBL:AACQ01000050 KO:K12862
RefSeq:XP_717691.1 RefSeq:XP_717785.1 ProteinModelPortal:Q5A7Q3
STRING:Q5A7Q3 GeneID:3640515 GeneID:3640625 KEGG:cal:CaO19.12868
KEGG:cal:CaO19.5413 Uniprot:Q5A7Q3
Length = 389
Score = 135 (52.6 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 50/177 (28%), Positives = 78/177 (44%)
Query: 11 HGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD 70
HGH G V ++ + D L SG D +V WD + R E + L GH ++I T I +
Sbjct: 172 HGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDIRSRVEAMTLL-GHTNDI--TSIETDYN 228
Query: 71 DRKIITSSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D ++ITSS DG +RL + + T+ L H + + P + S +G ++
Sbjct: 229 DPQVITSSMDGTIRLWDL---RKSKTELLITNHSKSIRSMKSHPKEATFV-SGDSNGEIK 284
Query: 130 HFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYD 186
+ L F S S N + NS +N + I+P F+ G D Y+
Sbjct: 285 QWLLPKGELLNEFGTSQLSPNQRD--NSRIINTLAINPVTNTLFS-GYDDGKLEFYN 338
Score = 96 (38.9 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 33/128 (25%), Positives = 61/128 (47%)
Query: 13 HKGCVNAVEFNS-TGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD 71
H+G + A+ + T + V+GS D + WD+++ K + L+GH+ I R + +
Sbjct: 84 HQGWIRAIALDEITNKWYVTGSADSTIKIWDFENNSLK-AVLTGHVLGI---RSLCISKR 139
Query: 72 RKIITSSA-DGQVR---LGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGF 127
+ S D +R L + D + H G VY + + P +++S G+D
Sbjct: 140 HPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELD-VLFSGGKDCV 198
Query: 128 VQHFDLRS 135
V+ +D+RS
Sbjct: 199 VRVWDIRS 206
Score = 74 (31.1 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 20/87 (22%), Positives = 35/87 (40%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
D++ R E GH N T ++ ND V++ S G + +W + K L+
Sbjct: 203 DIRSRVEAMTLLGHTNDITSIETDY---NDPQVITSSMDGTIRLWDLRKSKTELLITNHS 259
Query: 318 HVVNQLEPHPHIPMFATCGIEKTVKLW 344
+ ++ HP F + +K W
Sbjct: 260 KSIRSMKSHPKEATFVSGDSNGEIKQW 286
>UNIPROTKB|Q5A7Q3 [details] [associations]
symbol:PRP46 "Pre-mRNA-splicing factor PRP46"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005182 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0005681 GO:GO:0007049 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K12862 RefSeq:XP_717691.1 RefSeq:XP_717785.1
ProteinModelPortal:Q5A7Q3 STRING:Q5A7Q3 GeneID:3640515
GeneID:3640625 KEGG:cal:CaO19.12868 KEGG:cal:CaO19.5413
Uniprot:Q5A7Q3
Length = 389
Score = 135 (52.6 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 50/177 (28%), Positives = 78/177 (44%)
Query: 11 HGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD 70
HGH G V ++ + D L SG D +V WD + R E + L GH ++I T I +
Sbjct: 172 HGHLGGVYSIGLHPELDVLFSGGKDCVVRVWDIRSRVEAMTLL-GHTNDI--TSIETDYN 228
Query: 71 DRKIITSSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D ++ITSS DG +RL + + T+ L H + + P + S +G ++
Sbjct: 229 DPQVITSSMDGTIRLWDL---RKSKTELLITNHSKSIRSMKSHPKEATFV-SGDSNGEIK 284
Query: 130 HFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYD 186
+ L F S S N + NS +N + I+P F+ G D Y+
Sbjct: 285 QWLLPKGELLNEFGTSQLSPNQRD--NSRIINTLAINPVTNTLFS-GYDDGKLEFYN 338
Score = 96 (38.9 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 33/128 (25%), Positives = 61/128 (47%)
Query: 13 HKGCVNAVEFNS-TGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD 71
H+G + A+ + T + V+GS D + WD+++ K + L+GH+ I R + +
Sbjct: 84 HQGWIRAIALDEITNKWYVTGSADSTIKIWDFENNSLK-AVLTGHVLGI---RSLCISKR 139
Query: 72 RKIITSSA-DGQVR---LGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGF 127
+ S D +R L + D + H G VY + + P +++S G+D
Sbjct: 140 HPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELD-VLFSGGKDCV 198
Query: 128 VQHFDLRS 135
V+ +D+RS
Sbjct: 199 VRVWDIRS 206
Score = 74 (31.1 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 20/87 (22%), Positives = 35/87 (40%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
D++ R E GH N T ++ ND V++ S G + +W + K L+
Sbjct: 203 DIRSRVEAMTLLGHTNDITSIETDY---NDPQVITSSMDGTIRLWDLRKSKTELLITNHS 259
Query: 318 HVVNQLEPHPHIPMFATCGIEKTVKLW 344
+ ++ HP F + +K W
Sbjct: 260 KSIRSMKSHPKEATFVSGDSNGEIKQW 286
>UNIPROTKB|B5FZ19 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:59729 "Taeniopygia guttata" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 CTD:8668
HOVERGEN:HBG000900 OrthoDB:EOG4HX519 EMBL:DQ214273 EMBL:DQ214274
EMBL:DQ214277 EMBL:DQ214278 EMBL:DQ214279 EMBL:DQ214280
RefSeq:NP_001157823.1 UniGene:Tgu.2619 ProteinModelPortal:B5FZ19
STRING:B5FZ19 PRIDE:B5FZ19 GeneID:100190672 KEGG:tgu:100190672
Uniprot:B5FZ19
Length = 325
Score = 107 (42.7 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 37/132 (28%), Positives = 57/132 (43%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ + +++N GD L + + D +V W + E+ +GH ++ +
Sbjct: 6 LQGHERSITQIKYNREGDLLFTVAKDPIVNVW-YSVNGERLGTYNGHTGAVWC--VDADW 62
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSC----GED 125
D R ++T SAD RL E G+ L K V + G I++S G
Sbjct: 63 DTRHVLTGSADNSCRLWDC-ETGKQ--LALVKTSSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 126 GFVQHFDLRSDS 137
FV FDLR S
Sbjct: 120 CFVSFFDLRDPS 131
Score = 69 (29.3 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 20/89 (22%), Positives = 41/89 (46%)
Query: 256 PEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 315
P ++ E P + +S+ V +GP E++++G + G L + K G+ + +
Sbjct: 130 PSQIENNE-PYMKIPCSDSKITSAV--WGPLGEFIIAGHENGELNQFSAKSGEQLSNIKE 186
Query: 316 DRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
+N ++ + MF T + T KL+
Sbjct: 187 HTKQINDIQTSRDMTMFITASKDNTAKLF 215
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 96 (38.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 12 GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT-D 70
GH + V F +G + S S D+ V W + E + H ++ R + F+ D
Sbjct: 58 GHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGES-TVFKAHTASV---RSVHFSRD 113
Query: 71 DRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQH 130
++++T+S D V++ + + + L +H V P +I SCG+D V+
Sbjct: 114 GQRLVTASDDKSVKVWGV--ERKKFLYSLNRHTNWVRCARFSPDGR-LIASCGDDRTVRL 170
Query: 131 FDLRSDSATRLF 142
+D S +F
Sbjct: 171 WDTSSHQCINIF 182
Score = 94 (38.1 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 12 GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD 71
GHK ++ +FN L +GS DK ++ W+ + F ++ GH D I P
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFV-GHTDVITGVNFAP--SG 72
Query: 72 RKIITSSADGQVRL 85
+ +SS D VRL
Sbjct: 73 SLVASSSRDQTVRL 86
Score = 72 (30.4 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 42/165 (25%), Positives = 73/165 (44%)
Query: 279 GVNFFG--PNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG 336
GVN F P+ Y++SGS + I G+L+ + G + V + +FA+ G
Sbjct: 230 GVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGG 289
Query: 337 IEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAY 396
+ V +W T+F L N +++ HS+ +TPD H++ + R +
Sbjct: 290 ADSQVLMWK---TNFDSL--NYRELLSK-------HSK-RVTPDPPPHLMDIYPRSHHRH 336
Query: 397 RERR----YN-AADFES-DEEEGETYLLGFSDSDASS-EGGGNQR 434
+ N AD +S D + E + FS +DA + +G + R
Sbjct: 337 HPQNGTVEINPVADTQSTDPQVVEVGRVVFSTTDARNYDGASSSR 381
Score = 66 (28.3 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 22/83 (26%), Positives = 41/83 (49%)
Query: 264 EPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHV--VN 321
E V+ H S V+ V+F + + +++ SD + +W + K + + +RH V
Sbjct: 94 ESTVFKAHTAS--VRSVHF-SRDGQRLVTASDDKSVKVWGVERKKFLYSL--NRHTNWVR 148
Query: 322 QLEPHPHIPMFATCGIEKTVKLW 344
P + A+CG ++TV+LW
Sbjct: 149 CARFSPDGRLIASCGDDRTVRLW 171
Score = 55 (24.4 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 25/119 (21%), Positives = 52/119 (43%)
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D ++++T+S D V++ + + + L +H V P +I SCG+D V+
Sbjct: 113 DGQRLVTASDDKSVKVWGV--ERKKFLYSLNRHTNWVRCARFSPDGR-LIASCGDDRTVR 169
Query: 130 HFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
+D S +F + + ++ + N+ + A G+D +++DIR
Sbjct: 170 LWDTSSHQCINIF--TDYGGSA----TFVDFNS------SGTCIASSGADNTIKIWDIR 216
Score = 48 (22.0 bits), Expect = 0.00049, Sum P(4) = 0.00049
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 267 VYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQL-EP 325
+Y+ H + V V F D + G+D + +WK L + +H +P
Sbjct: 263 IYTLHGHKGPVLTVTFSRDGDLFASGGAD-SQVLMWKTNFDSLNYRELLSKHSKRVTPDP 321
Query: 326 HPHI 329
PH+
Sbjct: 322 PPHL 325
Score = 39 (18.8 bits), Expect = 0.00049, Sum P(4) = 0.00049
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 399 RRYNAADFESDEEEGETYLLGFSDSDASSEG 429
R + A E DE + E + G + S A G
Sbjct: 394 RTHTQAREEEDENQEERFAGGMTASPAERSG 424
>ZFIN|ZDB-GENE-041024-4 [details] [associations]
symbol:wdfy1 "WD repeat and FYVE domain containing 1"
species:7955 "Danio rerio" [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000306
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF01363
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00064 SMART:SM00320
ZFIN:ZDB-GENE-041024-4 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 CTD:57590 HOVERGEN:HBG054128 EMBL:BC083271
IPI:IPI00500055 RefSeq:NP_001007058.1 UniGene:Dr.78645
ProteinModelPortal:Q5XJM8 STRING:Q5XJM8 PRIDE:Q5XJM8 GeneID:474326
KEGG:dre:474326 InParanoid:Q5XJM8 NextBio:20850392
ArrayExpress:Q5XJM8 Bgee:Q5XJM8 Uniprot:Q5XJM8
Length = 410
Score = 119 (46.9 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+G V A+ ++ +L SG+ D VI WD R+ + L GH + + R +P T
Sbjct: 195 LKGHEGSVGALYWDPVHRWLFSGASDHSVIMWDIGGRQGRTLLLQGHHEKVQALRYLPLT 254
Query: 70 DDRKIITSSADGQV 83
R++++ SADG +
Sbjct: 255 --RQLVSCSADGGI 266
Score = 59 (25.8 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 317 RHVVNQLEPHPHIPMFATCGIEKTVKLW 344
+H + ++ P+ + TCG ++ VK+W
Sbjct: 366 KHSIAHMDMDPNRGLMVTCGSDRVVKIW 393
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 135 (52.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 41/140 (29%), Positives = 62/140 (44%)
Query: 3 RINLCGK-LHGHKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
R N+ G + H VN + FN +F L +GS DK V WD ++ R K H D I
Sbjct: 253 RTNVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRLKLHSFESHRDEI 312
Query: 61 FQTRIMPF---------TDDRKIITS-SADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKL 109
FQ + P TD R + S G+ + + EDG + + G H ++
Sbjct: 313 FQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPPELLFIHGGHTAKISDF 372
Query: 110 AVEPGSPYIIYSCGEDGFVQ 129
+ P P+++ S ED +Q
Sbjct: 373 SWNPNEPWVVCSVSEDNILQ 392
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 133 (51.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 40/134 (29%), Positives = 62/134 (46%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREK----FSYLSGHLDNIFQTRI 65
L GH+ + + FN GD LVS +DKLV+FW + EK F + + + I+
Sbjct: 200 LTGHESSIWDLAFNKDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDW 259
Query: 66 MPFTDDRKIITSSADGQVRLGQIFEDGRMDT-----KRLGKHQGRVYKLAVEPGSPYIIY 120
T+ I+T SAD + + D D K+ H V P I+
Sbjct: 260 SSLTNT--IVTGSADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILA 317
Query: 121 SCGEDGFVQHFDLR 134
SCG+DGF++ ++L+
Sbjct: 318 SCGDDGFIKIWELQ 331
Score = 118 (46.6 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 46/182 (25%), Positives = 80/182 (43%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRR--EKFSYLSGHLDNIFQTRIMP 67
L GH V +V ++STG L + S DK + W +D E S SGH +I ++
Sbjct: 111 LEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDI--KCVLW 168
Query: 68 FTDDRKIITSSADGQVRLGQIFEDGRMDT-KRLGKHQGRVYKLAVEPGSPYIIYSCGEDG 126
++ + +SS D ++ + DG + L H+ ++ LA ++ SCGED
Sbjct: 169 HPNEELLASSSYDDTIKFWKDI-DGDWECINTLTGHESSIWDLAFNKDGDKLV-SCGEDK 226
Query: 127 FVQH--FDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARV 184
V FD ++ +F F + +P+ SI +++ N G +D+
Sbjct: 227 LVLFWKFDKENEKWINIF---KFKNENSRPIYSIDWSSLT------NTIVTGSADDSIIF 277
Query: 185 YD 186
Y+
Sbjct: 278 YE 279
Score = 37 (18.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 331 MFATCGIEKTVKLW 344
+ A+CG + +K+W
Sbjct: 315 ILASCGDDGFIKIW 328
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 115 (45.5 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 12 GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD 71
GHK V +V+F+ G+ L S S D+ V W D+R KFS H + R + F+ D
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWI-PDKRGKFSEFKAHTAPV---RSVDFSAD 113
Query: 72 RKII-TSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQH 130
+ + T+S D +++ ++ + + H R K + + G +I SC ED ++
Sbjct: 114 GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD-GR--LIVSCSEDKTIKI 170
Query: 131 FDLRSDSATRLF 142
+D + F
Sbjct: 171 WDTTNKQCVNNF 182
Score = 64 (27.6 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 279 GVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG 336
GVN F P+D Y+++ S G L I G+L+ + G V + +FA+ G
Sbjct: 230 GVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGG 289
Query: 337 IEKTVKLW 344
+ V LW
Sbjct: 290 ADTQVLLW 297
Score = 47 (21.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 274 SQTVKGVNF--FGPNDEYVMS-GSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIP 330
S +V NF F P+ + S GSD + +W + KL++ VN + HP
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSD-QTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDN 241
Query: 331 MFATCGIEKTVKL 343
T + T+K+
Sbjct: 242 YLVTASSDGTLKI 254
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 110 (43.8 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 51/168 (30%), Positives = 72/168 (42%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRRE--KFSY-LSGHLDNIFQTRIMPFTDDRKIITSSADG 81
+G+F+ G D + ++ K R K S LS H + R F DD I+TSS D
Sbjct: 108 SGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCR---FLDDNSIVTSSGDT 164
Query: 82 QVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFVQHFDLRSDSATR 140
L I E G+ T LG H G LAV P +I +C D + +D+R + +
Sbjct: 165 TCALWDI-ETGQQKTVFLG-HTGDCMSLAVSPDFKLFISGAC--DATAKLWDVREGTCRQ 220
Query: 141 LFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
F S E+ +NAI P N G D R++D+R
Sbjct: 221 TF---SGHESD--------INAICFFP-NGEAICTGSDDATCRLFDLR 256
Score = 59 (25.8 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ +++ LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWD 83
Score = 42 (19.8 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 21/89 (23%), Positives = 39/89 (43%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 315
DL+ +E VYS H + + G+ F + +++G D + IW + V ++ G
Sbjct: 254 DLRADQELIVYS-HES--IICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKAERVGILSG 310
Query: 316 DRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
+ V+ L AT + +K+W
Sbjct: 311 HDNRVSCLGVTADGMAVATGSWDSFLKIW 339
>DICTYBASE|DDB_G0278945 [details] [associations]
symbol:DDB_G0278945 "WD repeat-containing protein 82"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278945 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030587 EMBL:AAFI02000024 KO:K14962 OMA:CTNMAFW
RefSeq:XP_641992.1 ProteinModelPortal:Q54XN8 STRING:Q54XN8
EnsemblProtists:DDB0218126 GeneID:8621724 KEGG:ddi:DDB_G0278945
InParanoid:Q54XN8 ProtClustDB:CLSZ2729103 Uniprot:Q54XN8
Length = 319
Score = 96 (38.9 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 263 EEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQ 322
E Q Y+ +N + F P+ +YV+SGS+ G + IWK G+ V + G V +
Sbjct: 233 EVKQRYTSFKNDNGSVIESSFSPDAQYVLSGSEDGTVHIWKTLTGEEVAVWGGHSSTVGR 292
Query: 323 LEPHPHIPMFAT-CGIEKTVKLWAP 346
++ +P M AT C + W P
Sbjct: 293 VQWNPRSMMAATACS---NLAFWIP 314
Score = 79 (32.9 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 36/165 (21%), Positives = 75/165 (45%)
Query: 8 GKLH--GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRI 65
GKLH + +N+++FN G L++ SDD+ + ++ D E L+ + +
Sbjct: 18 GKLHKDDNSSVINSMDFNKDGSLLITASDDESIHLYNI-DTGELQKTLNSKK---YGVDL 73
Query: 66 MPFT-DDRKIITSSA---DGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYS 121
+ FT ++ II +S D +R + ++ + K H+ +V +++ P + + S
Sbjct: 74 IKFTHNNNSIICASKNSWDESLRYLSLHDNKYL--KYFKGHRNKVVSISMSPINDMFL-S 130
Query: 122 CGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVID 166
D ++ +DLR++ L + S P I A+ ++
Sbjct: 131 GSLDDTIRMWDLRTNVCQGLLRRNGRPAVSFDPQGIIFATAVSVN 175
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 131 (51.2 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 72/312 (23%), Positives = 132/312 (42%)
Query: 49 KFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYK 108
KF+ L+GH + + P + + +SSAD +++ + DG+ + K + H+ +
Sbjct: 12 KFT-LAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAY-DGKFE-KTISGHKLGISD 66
Query: 109 LAVEPGSPYIIYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR 168
+A S ++ S +D ++ +D+ S C + + N P+
Sbjct: 67 VAWSSDSNLLV-SASDDKTLKIWDVSSGK------CLKTLKGHSNYVFCCNFN-----PQ 114
Query: 169 NPNYFAVGGSDEYARVYDIR--KCHWYSPISSDTPVDTFCPRH--LIGKNNI----HITG 220
+ N G DE R++D++ KC P SD R LI ++ I
Sbjct: 115 S-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 173
Query: 221 LAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPE------DLQKREEPQVYSGHRNS 274
A + LI +D F K G L+ + + D K + + Y+GH+N
Sbjct: 174 TASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE 232
Query: 275 QTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFAT 334
+ NF ++++SGS+ ++IW + ++V+ + G VV HP + A+
Sbjct: 233 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 292
Query: 335 CGIE--KTVKLW 344
+E KT+KLW
Sbjct: 293 AALENDKTIKLW 304
>UNIPROTKB|Q5F3K4 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9031
"Gallus gallus" [GO:0005764 "lysosome" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W EMBL:AJ851646
IPI:IPI00571490 RefSeq:NP_001026135.1 UniGene:Gga.3234
ProteinModelPortal:Q5F3K4 STRING:Q5F3K4 Ensembl:ENSGALT00000031283
GeneID:420427 KEGG:gga:420427 GeneTree:ENSGT00520000055738
HOVERGEN:HBG079413 InParanoid:Q5F3K4 OMA:NRLYSAG NextBio:20823337
Uniprot:Q5F3K4
Length = 678
Score = 132 (51.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L G+K + ++ N G +VSGS +K++ WD + K L GH DN+ ++
Sbjct: 164 LSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCA-KLMKLKGHTDNV--KALLLNR 220
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++ S+DG +RL + + + T R+ H V+ L V ++ YS G D +
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRV--HDEGVWALQVNEAFTHV-YSGGRDRKIY 277
Query: 130 HFDLRSDSATRLFYC 144
DLR+ R+ C
Sbjct: 278 CTDLRNPDI-RVLIC 291
Score = 49 (22.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 29/163 (17%), Positives = 64/163 (39%)
Query: 254 LSPEDLQKREEPQVYSGHRNSQTVKGVNFFG-PNDEYVMSGSDCGH-LF--IWKKKGGKL 309
++P D ++ E +G + ++ KG +F P V+ G G LF + + GG+
Sbjct: 479 INPMDEEENEINHAVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGET 538
Query: 310 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGR 369
+++ N+ P I + ++K + + +P P + K +K ++
Sbjct: 539 ESMLL------NETVPQWVIDIT----VDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSA 588
Query: 370 EDHSRITLTPD-VIMHVLRLQRRQTLAYRERRYNAADFESDEE 411
D ++ + V ++ L A + E +E+
Sbjct: 589 SDMLQVRKVMEHVYEKIINLDNESQTTSSSNNEKAGEQEKEED 631
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 106 (42.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 268 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP 327
Y GH+ S+ + F G ++ SGS+ ++IW + GKL+ + G VN + P
Sbjct: 482 YKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSP 541
Query: 328 -HIPMFATCGIEKTVKLW 344
++ M A+ + T+++W
Sbjct: 542 TNLHMLASASDDGTIRIW 559
Score = 75 (31.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWK-DRREKFSY-LSGHLDNIFQTRIMP 67
L H V ++F+ G +L S S D+ I W+ D + L GH + P
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 68 FTDDRKIITSSADGQVR 84
DDR+++T A+ +R
Sbjct: 330 --DDRQVLTCGAEEVIR 344
Score = 67 (28.6 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 20/92 (21%), Positives = 41/92 (44%)
Query: 53 LSGHLDNIFQTRIMPFTDDRKIITSSADGQVRL-GQIFEDGRMDTKR-LGKHQGRVYKLA 110
L H D ++ + F+ + K + SS+ Q + +I DG + K L H V +
Sbjct: 270 LESHTDEVW---FLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAIL 326
Query: 111 VEPGSPYIIYSCGEDGFVQHFDLRSDSATRLF 142
P ++ +CG + ++ +D+ S ++
Sbjct: 327 WSPDDRQVL-TCGAEEVIRRWDVDSGDCVHMY 357
Score = 57 (25.1 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 21/94 (22%), Positives = 39/94 (41%)
Query: 26 GDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVRL 85
G +++G D+ + WD D REK + + + TDD K + S V
Sbjct: 373 GQGIIAGMTDRSICMWDL-DGREKECWKGQRTQKVSD---IAMTDDGKWLVSVCKDSVI- 427
Query: 86 GQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYII 119
+F D +RL + + + ++ + YI+
Sbjct: 428 -SLF-DREATVERLIEEEDMITSFSLSNDNKYIL 459
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 72/312 (23%), Positives = 132/312 (42%)
Query: 49 KFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYK 108
KF+ L+GH + + P + + +SSAD +++ + DG+ + K + H+ +
Sbjct: 38 KFT-LAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAY-DGKFE-KTISGHKLGISD 92
Query: 109 LAVEPGSPYIIYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR 168
+A S ++ S +D ++ +D+ S C + + N P+
Sbjct: 93 VAWSSDSNLLV-SASDDKTLKIWDVSSGK------CLKTLKGHSNYVFCCNFN-----PQ 140
Query: 169 NPNYFAVGGSDEYARVYDIR--KCHWYSPISSDTPVDTFCPRH--LIGKNNI----HITG 220
+ N G DE R++D++ KC P SD R LI ++ I
Sbjct: 141 S-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 221 LAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPE------DLQKREEPQVYSGHRNS 274
A + LI +D F K G L+ + + D K + + Y+GH+N
Sbjct: 200 TASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE 258
Query: 275 QTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFAT 334
+ NF ++++SGS+ ++IW + ++V+ + G VV HP + A+
Sbjct: 259 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Query: 335 CGIE--KTVKLW 344
+E KT+KLW
Sbjct: 319 AALENDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 72/312 (23%), Positives = 132/312 (42%)
Query: 49 KFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYK 108
KF+ L+GH + + P + + +SSAD +++ + DG+ + K + H+ +
Sbjct: 38 KFT-LAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAY-DGKFE-KTISGHKLGISD 92
Query: 109 LAVEPGSPYIIYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR 168
+A S ++ S +D ++ +D+ S C + + N P+
Sbjct: 93 VAWSSDSNLLV-SASDDKTLKIWDVSSGK------CLKTLKGHSNYVFCCNFN-----PQ 140
Query: 169 NPNYFAVGGSDEYARVYDIR--KCHWYSPISSDTPVDTFCPRH--LIGKNNI----HITG 220
+ N G DE R++D++ KC P SD R LI ++ I
Sbjct: 141 S-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 221 LAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPE------DLQKREEPQVYSGHRNS 274
A + LI +D F K G L+ + + D K + + Y+GH+N
Sbjct: 200 TASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE 258
Query: 275 QTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFAT 334
+ NF ++++SGS+ ++IW + ++V+ + G VV HP + A+
Sbjct: 259 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Query: 335 CGIE--KTVKLW 344
+E KT+KLW
Sbjct: 319 AALENDKTIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 72/312 (23%), Positives = 132/312 (42%)
Query: 49 KFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYK 108
KF+ L+GH + + P + + +SSAD +++ + DG+ + K + H+ +
Sbjct: 38 KFT-LAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAY-DGKFE-KTISGHKLGISD 92
Query: 109 LAVEPGSPYIIYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR 168
+A S ++ S +D ++ +D+ S C + + N P+
Sbjct: 93 VAWSSDSNLLV-SASDDKTLKIWDVSSGK------CLKTLKGHSNYVFCCNFN-----PQ 140
Query: 169 NPNYFAVGGSDEYARVYDIR--KCHWYSPISSDTPVDTFCPRH--LIGKNNI----HITG 220
+ N G DE R++D++ KC P SD R LI ++ I
Sbjct: 141 S-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 221 LAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPE------DLQKREEPQVYSGHRNS 274
A + LI +D F K G L+ + + D K + + Y+GH+N
Sbjct: 200 TASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE 258
Query: 275 QTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFAT 334
+ NF ++++SGS+ ++IW + ++V+ + G VV HP + A+
Sbjct: 259 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Query: 335 CGIE--KTVKLW 344
+E KT+KLW
Sbjct: 319 AALENDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 72/312 (23%), Positives = 132/312 (42%)
Query: 49 KFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYK 108
KF+ L+GH + + P + + +SSAD +++ + DG+ + K + H+ +
Sbjct: 38 KFT-LAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAY-DGKFE-KTISGHKLGISD 92
Query: 109 LAVEPGSPYIIYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR 168
+A S ++ S +D ++ +D+ S C + + N P+
Sbjct: 93 VAWSSDSNLLV-SASDDKTLKIWDVSSGK------CLKTLKGHSNYVFCCNFN-----PQ 140
Query: 169 NPNYFAVGGSDEYARVYDIR--KCHWYSPISSDTPVDTFCPRH--LIGKNNI----HITG 220
+ N G DE R++D++ KC P SD R LI ++ I
Sbjct: 141 S-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 221 LAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPE------DLQKREEPQVYSGHRNS 274
A + LI +D F K G L+ + + D K + + Y+GH+N
Sbjct: 200 TASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE 258
Query: 275 QTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFAT 334
+ NF ++++SGS+ ++IW + ++V+ + G VV HP + A+
Sbjct: 259 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Query: 335 CGIE--KTVKLW 344
+E KT+KLW
Sbjct: 319 AALENDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 72/312 (23%), Positives = 132/312 (42%)
Query: 49 KFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYK 108
KF+ L+GH + + P + + +SSAD +++ + DG+ + K + H+ +
Sbjct: 38 KFT-LAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAY-DGKFE-KTISGHKLGISD 92
Query: 109 LAVEPGSPYIIYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPR 168
+A S ++ S +D ++ +D+ S C + + N P+
Sbjct: 93 VAWSSDSNLLV-SASDDKTLKIWDVSSGK------CLKTLKGHSNYVFCCNFN-----PQ 140
Query: 169 NPNYFAVGGSDEYARVYDIR--KCHWYSPISSDTPVDTFCPRH--LIGKNNI----HITG 220
+ N G DE R++D++ KC P SD R LI ++ I
Sbjct: 141 S-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 221 LAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPE------DLQKREEPQVYSGHRNS 274
A + LI +D F K G L+ + + D K + + Y+GH+N
Sbjct: 200 TASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE 258
Query: 275 QTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFAT 334
+ NF ++++SGS+ ++IW + ++V+ + G VV HP + A+
Sbjct: 259 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 318
Query: 335 CGIE--KTVKLW 344
+E KT+KLW
Sbjct: 319 AALENDKTIKLW 330
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 119 (46.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 41/135 (30%), Positives = 59/135 (43%)
Query: 12 GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD 71
GH + + FNS G+ L +G DK V WD ++K S L G +I P +D
Sbjct: 322 GHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQK-STLLGASQSIVSVSFSP--ND 378
Query: 72 RKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHF 131
I+ +S D RL E GR G H G+VY + + S D ++ +
Sbjct: 379 ESILGTSNDNSARLWNT-ELGRSRHTLTG-HIGKVYTGKFINSNRVVTGS--HDRTIKLW 434
Query: 132 DLRSDSATRLFYCSS 146
DL+ TR +C S
Sbjct: 435 DLQKGYCTRTIFCFS 449
Score = 61 (26.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 283 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM 313
+ P+ Y+ SGS G + IW GK V+++
Sbjct: 547 WSPDGRYIASGSIDGSICIWDATNGKTVKVL 577
>MGI|MGI:1914811 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1914811 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 UniGene:Mm.473239 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 OMA:NRLYSAG
EMBL:AK122511 EMBL:AK012599 EMBL:AK018396 EMBL:AK030041
EMBL:AK033631 EMBL:AK035273 EMBL:AK035864 EMBL:AK043970
EMBL:BC006679 EMBL:BC048155 EMBL:BC062967 IPI:IPI00336198
IPI:IPI00659186 IPI:IPI00677198 RefSeq:NP_080512.1
ProteinModelPortal:Q8BH57 SMR:Q8BH57 STRING:Q8BH57
PhosphoSite:Q8BH57 PaxDb:Q8BH57 PRIDE:Q8BH57
Ensembl:ENSMUST00000036561 GeneID:67561 KEGG:mmu:67561
UCSC:uc009sbm.1 UCSC:uc009sbn.1 UCSC:uc009sbo.1 InParanoid:Q8BH57
NextBio:324921 Bgee:Q8BH57 CleanEx:MM_WDR48 Genevestigator:Q8BH57
GermOnline:ENSMUSG00000032512 Uniprot:Q8BH57
Length = 676
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L G+K + ++ N G +VSGS +K++ WD + K L GH DN+ ++
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCA-KLMKLKGHTDNV--KALLLHR 220
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++ S+DG +RL + + + T R+ H V+ L V ++ YS G D +
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRV--HDEGVWALQVNDAFTHV-YSGGRDRKIY 277
Query: 130 HFDLRSDSATRLFYC 144
DLR+ R+ C
Sbjct: 278 CTDLRNPDI-RVLIC 291
>RGD|1309702 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0016579
"protein deubiquitination" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309702 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 IPI:IPI00914740 RefSeq:NP_001129367.1
UniGene:Rn.8675 PRIDE:D3Z8C7 Ensembl:ENSRNOT00000024172
GeneID:363164 KEGG:rno:363164 UCSC:RGD:1309702 OMA:RYPKENT
NextBio:682684 Uniprot:D3Z8C7
Length = 676
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L G+K + ++ N G +VSGS +K++ WD + K L GH DN+ ++
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCA-KLMKLKGHTDNV--KALLLHR 220
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++ S+DG +RL + + + T R+ H V+ L V ++ YS G D +
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRV--HDEGVWALQVNDAFTHV-YSGGRDRKIY 277
Query: 130 HFDLRSDSATRLFYC 144
DLR+ R+ C
Sbjct: 278 CTDLRNPDI-RVLIC 291
>ZFIN|ZDB-GENE-041014-277 [details] [associations]
symbol:wdr26b "WD repeat domain 26b" species:7955
"Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-041014-277 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AL929435 HSSP:P16649
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX004824 IPI:IPI00504405 RefSeq:NP_001189371.1
UniGene:Dr.156389 UniGene:Dr.79849 ProteinModelPortal:Q5SP67
PRIDE:Q5SP67 Ensembl:ENSDART00000029894 GeneID:564794
KEGG:dre:564794 CTD:564794 HOGENOM:HOG000160946 HOVERGEN:HBG083958
InParanoid:Q5SP67 OMA:IRGQFYQ OrthoDB:EOG4GHZNV NextBio:20885564
Bgee:Q5SP67 Uniprot:Q5SP67
Length = 576
Score = 113 (44.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 258 DLQKREEPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 316
DLQ R + Y G + T+ F G N++++ SGS+ ++IW K+ + + G
Sbjct: 466 DLQDRVLVRKYQGVTQGFYTIHSC-FGGHNEDFIASGSEDHKVYIWHKRSELPIVELTGH 524
Query: 317 RHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 348
VN + +P IP + A+ + TV++W P P
Sbjct: 525 TRTVNCVSWNPCIPSLMASASDDGTVRIWGPAP 557
Score = 66 (28.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 29/119 (24%), Positives = 47/119 (39%)
Query: 21 EFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYL---SGHLDNIFQTRIMPFTDDRKIITS 77
+F++ G L +GS D VI W + + L GH + P DD +I
Sbjct: 274 KFSNDGTKLATGSKDTTVIIWQVEPDTHQLKLLRTLEGHAYGVSYLAWSP--DDVYLIAC 331
Query: 78 SAD--GQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYI-------IYSCGEDG 126
D ++ L + + G + TK H+ + +A P G ++ Y C DG
Sbjct: 332 GPDDCSELWLWNV-QTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDG 389
Score = 51 (23.0 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 19/84 (22%), Positives = 34/84 (40%)
Query: 3 RINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWK----DRREKFSYLSGHLD 58
++ L L GH V+ + ++ +L++ D W W + R K S H D
Sbjct: 302 QLKLLRTLEGHAYGVSYLAWSPDDVYLIACGPDDCSELWLWNVQTGELRTKMS--QSHED 359
Query: 59 NIFQTRIMPFTDDRKIITSSADGQ 82
++ P D ++ +T GQ
Sbjct: 360 SLTSVAWNP--DGKRFVTGGQRGQ 381
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 96 (38.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 43/191 (22%), Positives = 82/191 (42%)
Query: 3 RINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQ 62
R+++ KL V +V+ + T ++++ D V W+++ + S+ + +
Sbjct: 4 RLDIKKKLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRT 63
Query: 63 TRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDT-KRLGKHQGRVYKLAVEPGSPYIIYS 121
R + + I+T S D +R ++ M+ K H + + V P PYI+ S
Sbjct: 64 ARFI--AKKQWIVTGSDDTYIR---VYNYNTMEKIKSFEAHADYIRCIIVHPTLPYIL-S 117
Query: 122 CGEDGFVQHFDLRSD-SATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDE 180
+D F++ +D S T++F E + SI N P++ N FA D+
Sbjct: 118 SSDDMFIKLWDYEKGWSNTQVF------EGHSHYVMSIAWN-----PKDTNQFATASLDK 166
Query: 181 YARVYDIRKCH 191
+V+ I H
Sbjct: 167 TVKVWSINSPH 177
Score = 89 (36.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/76 (28%), Positives = 38/76 (50%)
Query: 270 GHRNSQTVKGVNFF-GPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 328
GH + V +F G Y++SG+D + IW + V+ + G + V+ + HP
Sbjct: 184 GHEKG--INSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPE 241
Query: 329 IPMFATCGIEKTVKLW 344
+P+ + + TVKLW
Sbjct: 242 LPLILSGSEDGTVKLW 257
>MGI|MGI:1860763 [details] [associations]
symbol:Eif3i "eukaryotic translation initiation factor 3,
subunit I" species:10090 "Mus musculus" [GO:0003743 "translation
initiation factor activity" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISO;IDA] [GO:0006412
"translation" evidence=IEA] [GO:0006413 "translational initiation"
evidence=ISO;IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1860763 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006413 eggNOG:COG2319
GO:GO:0003743 GO:GO:0005852 HOGENOM:HOG000231322 KO:K03246
HAMAP:MF_03008 CTD:8668 GeneTree:ENSGT00630000089849
HOVERGEN:HBG000900 OMA:ATVAGWS OrthoDB:EOG4HX519 ChiTaRS:EIF3I
EMBL:AF188297 EMBL:AF271072 EMBL:AK012375 EMBL:AK002896
EMBL:AK010781 EMBL:BC029625 IPI:IPI00269613 RefSeq:NP_061269.1
UniGene:Mm.250874 ProteinModelPortal:Q9QZD9 SMR:Q9QZD9
MINT:MINT-1869798 STRING:Q9QZD9 PhosphoSite:Q9QZD9
REPRODUCTION-2DPAGE:Q9QZD9 PaxDb:Q9QZD9 PRIDE:Q9QZD9
Ensembl:ENSMUST00000102593 GeneID:54709 KEGG:mmu:54709
InParanoid:Q9QZD9 NextBio:311544 Bgee:Q9QZD9 Genevestigator:Q9QZD9
GermOnline:ENSMUSG00000028798 Uniprot:Q9QZD9
Length = 325
Score = 102 (41.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 42/162 (25%), Positives = 65/162 (40%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ + +++N GD L + + D +V W + E+ GH ++ +
Sbjct: 6 LQGHERSITQIKYNREGDLLFTVAKDPIVNVW-YSVNGERLGTYMGHTGAVWC--VDADW 62
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSC----GED 125
D + ++T SAD RL E G+ L K V + G I++S G
Sbjct: 63 DTKHVLTGSADNSCRLWDC-ETGKQ--LALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 126 GFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP 167
FV FDLR S S K P N ++ + V P
Sbjct: 120 CFVSFFDLRDPSQI-----DSNEPYMKIPCNDSKITSAVWGP 156
Score = 70 (29.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 264 EPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK-LVRLMVGDRHVVNQ 322
EP + +S+ V +GP E V++G + G L + K G+ LV + R + N
Sbjct: 137 EPYMKIPCNDSKITSAV--WGPLGECVIAGHESGELNQYSAKSGEVLVNVKEHSRQI-ND 193
Query: 323 LEPHPHIPMFATCGIEKTVKLW 344
++ + MF T + T KL+
Sbjct: 194 IQLSRDMTMFVTASKDNTAKLF 215
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 38/132 (28%), Positives = 58/132 (43%)
Query: 10 LHGHKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPF 68
+ H VN + FN +F L +GS DK V WD ++ R K H D IFQ + P
Sbjct: 261 IDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPH 320
Query: 69 ---------TDDRKIITS-SADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPY 117
TD R + S G+ + + EDG + + G H ++ + P P+
Sbjct: 321 NETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 380
Query: 118 IIYSCGEDGFVQ 129
++ S ED +Q
Sbjct: 381 VVCSVSEDNILQ 392
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 38/132 (28%), Positives = 58/132 (43%)
Query: 10 LHGHKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPF 68
+ H VN + FN +F L +GS DK V WD ++ R K H D IFQ + P
Sbjct: 261 IDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPH 320
Query: 69 ---------TDDRKIITS-SADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPY 117
TD R + S G+ + + EDG + + G H ++ + P P+
Sbjct: 321 NETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 380
Query: 118 IIYSCGEDGFVQ 129
++ S ED +Q
Sbjct: 381 VVCSVSEDNILQ 392
>UNIPROTKB|O93277 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9031
"Gallus gallus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF020054 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000162559 HOVERGEN:HBG000780 CTD:9948 IPI:IPI00581678
RefSeq:NP_001004402.1 UniGene:Gga.2409 ProteinModelPortal:O93277
STRING:O93277 PRIDE:O93277 GeneID:422842 KEGG:gga:422842
NextBio:20825413 Uniprot:O93277
Length = 609
Score = 133 (51.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 42/145 (28%), Positives = 69/145 (47%)
Query: 8 GKLHGHKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIM 66
G++ GH +N+V+ T + L +GSDD F++ + KF+ LS H + R
Sbjct: 142 GEITGHNKVINSVDIKQTRPYRLATGSDDNCAAFFEGPPFKFKFT-LSDHTRFVNCVRFS 200
Query: 67 PFTDDRKIITSSADGQVRLGQIFEDGRMDTK--RLG---KHQGRVYKLAVEPGSPYIIYS 121
P D + T+SADGQ+ DG+ K LG H G +Y ++ P S ++ +
Sbjct: 201 P--DGNRFATASADGQI----FIYDGKTGEKVCALGGGKAHDGGIYAISWSPDSSQLLSA 254
Query: 122 CGEDGFVQHFDLRSDSATRLFYCSS 146
G D + +D+ ++S F S
Sbjct: 255 SG-DKTAKIWDVGANSVVSTFNMGS 278
Score = 44 (20.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 162 AIVIDPRNPNYFAVGGSDEYARVYDIR 188
A+ + P + AVGG+D R+Y I+
Sbjct: 452 AVAVHPGGGSV-AVGGTDGNVRLYSIQ 477
>UNIPROTKB|Q4R2Z6 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9541
"Macaca fascicularis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764
GO:GO:0016579 InterPro:IPR021772 Pfam:PF11816 HOVERGEN:HBG079413
EMBL:AB179472 ProteinModelPortal:Q4R2Z6 PRIDE:Q4R2Z6 Uniprot:Q4R2Z6
Length = 622
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L G+K + ++ N G +VSGS +K++ WD + K L GH DN+ ++
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCA-KLMKLKGHTDNV--KALLLNR 220
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++ S+DG +RL + + + T R+ H V+ L V ++ YS G D +
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRV--HDEGVWALQVNDAFTHV-YSGGRDRKIY 277
Query: 130 HFDLRSDSATRLFYC 144
DLR+ R+ C
Sbjct: 278 CTDLRNPDI-RVLIC 291
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 99 (39.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 35/119 (29%), Positives = 60/119 (50%)
Query: 17 VNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT-DDRKII 75
+ +V F+ G +L +G++DK + WD R + + +GH +I+ + F D R I
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQF-AGHEQDIYS---LDFARDGRTIA 404
Query: 76 TSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGE-DGFVQHFDL 133
+ S D VRL I E+G T + + V +A+ P + Y+ + G D V+ +DL
Sbjct: 405 SGSGDRTVRLWDI-ENGTALT--VFTIEDGVTTVAISPDTKYV--AAGSLDKSVRVWDL 458
Score = 80 (33.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGS-DCGHLFIWKKKGGKLVRLMVGDRHVVNQLE 324
+ + GHR+ V V P++++VMSGS D G F W + G ++ G ++ V +
Sbjct: 522 KTFEGHRDF--VLSVALT-PDNQWVMSGSKDRGVQF-WDPRTGSTQLMLQGHKNSVISVA 577
Query: 325 PHPHIPMFATCGIEKTVKLWA 345
P P FAT + ++W+
Sbjct: 578 PSPTGGFFATGSGDMRARIWS 598
>UNIPROTKB|Q5R7R2 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9601 "Pongo abelii" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 CTD:8668
HOVERGEN:HBG000900 EMBL:CR860050 RefSeq:NP_001126286.1
UniGene:Pab.18842 ProteinModelPortal:Q5R7R2 PRIDE:Q5R7R2
GeneID:100173261 KEGG:pon:100173261 InParanoid:Q5R7R2
Uniprot:Q5R7R2
Length = 325
Score = 102 (41.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 36/132 (27%), Positives = 56/132 (42%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ + +++N GD L + + D +V W + E+ GH ++ +
Sbjct: 6 LQGHERSITQIKYNREGDLLFTVAKDPIVNVW-YSVNGERLGTYMGHTGAVWC--VDADW 62
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSC----GED 125
D + ++T SAD RL E G+ L K V + G I++S G
Sbjct: 63 DTKHVLTGSADNSCRLWDC-ETGKQ--LALLKTNSAVRTCGFDFGGSIIMFSTDKQMGYQ 119
Query: 126 GFVQHFDLRSDS 137
FV FDLR S
Sbjct: 120 CFVSFFDLRDPS 131
Score = 69 (29.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 264 EPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK-LVRLMVGDRHVVNQ 322
EP + +S+ V +GP E +++G + G L + K G+ LV + R + N
Sbjct: 137 EPYMKIPCNDSKITSAV--WGPLGECIIAGHESGELNQYSAKSGEVLVNVKEHSRQI-ND 193
Query: 323 LEPHPHIPMFATCGIEKTVKLW 344
++ + MF T + T KL+
Sbjct: 194 IQLSRDMTMFVTASKDNTAKLF 215
>RGD|1560498 [details] [associations]
symbol:Eif3i-ps1 "eukaryotic translation initiation factor 3,
subunit I, pseudogene 1" species:10116 "Rattus norvegicus"
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
KO:K03246 HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900
OrthoDB:EOG4HX519 EMBL:BC158748 EMBL:BC158821 IPI:IPI00766018
RefSeq:NP_001108507.1 UniGene:Rn.162577 ProteinModelPortal:B0BNA7
STRING:B0BNA7 PhosphoSite:B0BNA7 PRIDE:B0BNA7 GeneID:682390
KEGG:rno:682390 RGD:728910 NextBio:722902 ArrayExpress:B0BNA7
Genevestigator:B0BNA7 Uniprot:B0BNA7
Length = 325
Score = 102 (41.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 42/162 (25%), Positives = 65/162 (40%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ + +++N GD L + + D +V W + E+ GH ++ +
Sbjct: 6 LQGHERSITQIKYNREGDLLFTVAKDPIVNVW-YSVNGERLGTYMGHTGAVWC--VDADW 62
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSC----GED 125
D + ++T SAD RL E G+ L K V + G I++S G
Sbjct: 63 DTKHVLTGSADNSCRLWDC-ETGKQ--LALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 126 GFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP 167
FV FDLR S S K P N ++ + V P
Sbjct: 120 CFVSFFDLRDPSQI-----DSNEPYMKIPCNDSKITSAVWGP 156
Score = 69 (29.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 264 EPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK-LVRLMVGDRHVVNQ 322
EP + +S+ V +GP E +++G + G L + K G+ LV + R + N
Sbjct: 137 EPYMKIPCNDSKITSAV--WGPLGECIIAGHESGELNQYSAKSGEVLVNVKEHSRQI-ND 193
Query: 323 LEPHPHIPMFATCGIEKTVKLW 344
++ + MF T + T KL+
Sbjct: 194 IQLSRDMTMFVTASKDNTAKLF 215
>UNIPROTKB|F1MV75 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 InterPro:IPR021772
Pfam:PF11816 IPI:IPI00697548 UniGene:Bt.64382
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:DAAA02053659
EMBL:DAAA02053660 EMBL:DAAA02053661 Ensembl:ENSBTAT00000004876
Uniprot:F1MV75
Length = 677
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L G+K + ++ N G +VSGS +K++ WD + K L GH DN+ ++
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCA-KLMKLKGHTDNV--KALLLNR 220
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++ S+DG +RL + + + T R+ H V+ L V ++ YS G D +
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRV--HDEGVWALQVNDAFTHV-YSGGRDRKIY 277
Query: 130 HFDLRSDSATRLFYC 144
DLR+ R+ C
Sbjct: 278 CTDLRNPDI-RVLIC 291
>UNIPROTKB|Q32PG3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005764 "lysosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 HSSP:P63005 EMBL:BC108126
IPI:IPI00697548 RefSeq:NP_001069992.1 UniGene:Bt.64382
ProteinModelPortal:Q32PG3 STRING:Q32PG3 GeneID:618860
KEGG:bta:618860 CTD:57599 HOGENOM:HOG000007343 InParanoid:Q32PG3
OrthoDB:EOG4HHP1W NextBio:20901375 Uniprot:Q32PG3
Length = 677
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L G+K + ++ N G +VSGS +K++ WD + K L GH DN+ ++
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCA-KLMKLKGHTDNV--KALLLNR 220
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++ S+DG +RL + + + T R+ H V+ L V ++ YS G D +
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRV--HDEGVWALQVNDAFTHV-YSGGRDRKIY 277
Query: 130 HFDLRSDSATRLFYC 144
DLR+ R+ C
Sbjct: 278 CTDLRNPDI-RVLIC 291
>UNIPROTKB|E2RJ50 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:AAEX03013494
RefSeq:XP_860103.1 ProteinModelPortal:E2RJ50 SMR:E2RJ50
PRIDE:E2RJ50 Ensembl:ENSCAFT00000008168 GeneID:477027
KEGG:cfa:477027 NextBio:20852578 Uniprot:E2RJ50
Length = 677
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L G+K + ++ N G +VSGS +K++ WD + K L GH DN+ ++
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCA-KLMKLKGHTDNV--KALLLNR 220
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++ S+DG +RL + + + T R+ H V+ L V ++ YS G D +
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRV--HDEGVWALQVNDAFTHV-YSGGRDRKIY 277
Query: 130 HFDLRSDSATRLFYC 144
DLR+ R+ C
Sbjct: 278 CTDLRNPDI-RVLIC 291
>UNIPROTKB|Q8TAF3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0019048 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W HOVERGEN:HBG079413 OMA:NRLYSAG EMBL:AF468833
EMBL:AB040882 EMBL:AK297349 EMBL:AK298810 EMBL:AK302307
EMBL:AL162064 EMBL:AL832926 EMBL:BX649170 EMBL:BC026353
EMBL:BC037168 IPI:IPI00658079 IPI:IPI00658210 IPI:IPI00791758
IPI:IPI00792902 IPI:IPI00937128 PIR:T47168 RefSeq:NP_065890.1
UniGene:Hs.109778 ProteinModelPortal:Q8TAF3 SMR:Q8TAF3
IntAct:Q8TAF3 STRING:Q8TAF3 PhosphoSite:Q8TAF3 DMDM:74760390
PaxDb:Q8TAF3 PeptideAtlas:Q8TAF3 PRIDE:Q8TAF3
Ensembl:ENST00000302313 Ensembl:ENST00000396258
Ensembl:ENST00000544962 GeneID:57599 KEGG:hsa:57599 UCSC:uc003cit.3
UCSC:uc011ayt.1 UCSC:uc011ayu.1 UCSC:uc011ayv.1
GeneCards:GC03P039069 HGNC:HGNC:30914 HPA:HPA038421 MIM:612167
neXtProt:NX_Q8TAF3 PharmGKB:PA134956949 InParanoid:Q8TAF3
ChiTaRS:WDR48 GenomeRNAi:57599 NextBio:64214 ArrayExpress:Q8TAF3
Bgee:Q8TAF3 CleanEx:HS_WDR48 Genevestigator:Q8TAF3
GermOnline:ENSG00000114742 Uniprot:Q8TAF3
Length = 677
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L G+K + ++ N G +VSGS +K++ WD + K L GH DN+ ++
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCA-KLMKLKGHTDNV--KALLLNR 220
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++ S+DG +RL + + + T R+ H V+ L V ++ YS G D +
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRV--HDEGVWALQVNDAFTHV-YSGGRDRKIY 277
Query: 130 HFDLRSDSATRLFYC 144
DLR+ R+ C
Sbjct: 278 CTDLRNPDI-RVLIC 291
>UNIPROTKB|F2Z5V5 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 KO:K15361
InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:CU856480
RefSeq:XP_003132167.1 UniGene:Ssc.3296 ProteinModelPortal:F2Z5V5
SMR:F2Z5V5 PRIDE:F2Z5V5 Ensembl:ENSSSCT00000012329 GeneID:100518629
KEGG:ssc:100518629 Uniprot:F2Z5V5
Length = 677
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L G+K + ++ N G +VSGS +K++ WD + K L GH DN+ ++
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCA-KLMKLKGHTDNV--KALLLNR 220
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++ S+DG +RL + + + T R+ H V+ L V ++ YS G D +
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRV--HDEGVWALQVNDAFTHV-YSGGRDRKIY 277
Query: 130 HFDLRSDSATRLFYC 144
DLR+ R+ C
Sbjct: 278 CTDLRNPDI-RVLIC 291
>UNIPROTKB|Q5RAW8 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9601
"Pongo abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413
OMA:NRLYSAG EMBL:CR858893 RefSeq:NP_001125636.1 UniGene:Pab.18183
ProteinModelPortal:Q5RAW8 Ensembl:ENSPPYT00000016282
GeneID:100172554 KEGG:pon:100172554 InParanoid:Q5RAW8
Uniprot:Q5RAW8
Length = 677
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/135 (28%), Positives = 66/135 (48%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L G+K + ++ N G +VSGS +K++ WD + K L GH DN+ ++
Sbjct: 164 LSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCA-KLMKLKGHTDNV--KALLLNR 220
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
D + ++ S+DG +RL + + + T R+ H V+ L V ++ YS G D +
Sbjct: 221 DGTQCLSGSSDGTIRLWSLGQQRCIATYRV--HDEGVWALQVNDAFTHV-YSGGRDRKIY 277
Query: 130 HFDLRSDSATRLFYC 144
DLR+ R+ C
Sbjct: 278 CTDLRNPDI-RVLIC 291
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 98 (39.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 29/126 (23%), Positives = 57/126 (45%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
+ GH G V + ++ +G+ D+++ WD + K S L+GH+ + + T
Sbjct: 168 ISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLS-LTGHVSTVRGVAVS--T 224
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
+ + D QV+ + E ++ G H VY LA+ P ++ + G D +
Sbjct: 225 KHPYLFSCGEDRQVKCWDL-EYNKVIRHYHG-HLSAVYSLALHPTID-VLATSGRDSTAR 281
Query: 130 HFDLRS 135
+D+R+
Sbjct: 282 IWDMRT 287
Score = 78 (32.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 22/87 (25%), Positives = 39/87 (44%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
D++ + +GH N TV V N + +++GS + +W GK V + +
Sbjct: 284 DMRTKANVHTLTGHTN--TVASVVAQATNPQ-IITGSHDSTVRLWDLAAGKSVCTLTNHK 340
Query: 318 HVVNQLEPHPHIPMFATCGIEKTVKLW 344
V + HP + MFA+ + +K W
Sbjct: 341 KSVRSIVLHPSLYMFASASPDN-IKQW 366
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 130 (50.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 37/125 (29%), Positives = 57/125 (45%)
Query: 17 VNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD----- 70
VN + FN +F L SGS DK V WD ++ + K H D IFQ + P +
Sbjct: 276 VNCLSFNPNSEFILASGSPDKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS 335
Query: 71 ---DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIYSCGE 124
DR++ S G+ + + EDG + + G H ++ + P P++I S E
Sbjct: 336 SGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE 395
Query: 125 DGFVQ 129
D +Q
Sbjct: 396 DNIMQ 400
>UNIPROTKB|Q5IH81 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9986 "Oryctolagus cuniculus" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900
OrthoDB:EOG4HX519 EMBL:AY727926 RefSeq:NP_001075647.1
UniGene:Ocu.6213 ProteinModelPortal:Q5IH81 STRING:Q5IH81
PRIDE:Q5IH81 GeneID:100008959 Uniprot:Q5IH81
Length = 333
Score = 101 (40.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 36/132 (27%), Positives = 56/132 (42%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ + +++N GD L + + D +V W + E+ GH ++ +
Sbjct: 6 LQGHERSITQIKYNREGDLLFTVAKDPIVNVW-YSVNGERLGTYMGHTGAVWC--VDADW 62
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSC----GED 125
D + ++T SAD RL E G+ L K V + G I++S G
Sbjct: 63 DTKHVLTGSADNSCRLWDC-ETGKQ--LALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 126 GFVQHFDLRSDS 137
FV FDLR S
Sbjct: 120 CFVSFFDLRDPS 131
Score = 70 (29.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 264 EPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK-LVRLMVGDRHVVNQ 322
EP + +S+ V +GP E +++G + G L + K G+ LV + R + N
Sbjct: 137 EPYMKIPCNDSKITSAV--WGPLGECIIAGHESGELNQYSAKSGEVLVNVKEHSRQI-ND 193
Query: 323 LEPHPHIPMFATCGIEKTVKLW 344
++ + MF T + T KL+
Sbjct: 194 IQLSREMTMFVTASKDNTAKLF 215
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 116 (45.9 bits), Expect = 0.0010, P = 0.0010
Identities = 36/118 (30%), Positives = 61/118 (51%)
Query: 26 GDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVRL 85
G+ LVSGSDD + W+ K+ ++ + ++GH+ + Q P D R I ++S D V+L
Sbjct: 329 GERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSP--DTRYIASASFDKSVKL 386
Query: 86 GQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHFDLRSDSATRLFY 143
G+ G H G VY++A S ++ S D ++ F+L++ S L+Y
Sbjct: 387 W-CGRTGKYLASLRG-HVGPVYQVAWSADSRLLV-SGSADSTLKVFELKTKS---LYY 438
Score = 92 (37.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 288 EYVMSGSDCGHLFIWKKKGGKL-VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
E ++SGSD LF+W K K + M G +VNQ+ P A+ +K+VKLW
Sbjct: 330 ERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLW 387
Score = 84 (34.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 35/145 (24%), Positives = 64/145 (44%)
Query: 1 MKRINLCG-KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDN 59
++ + C + GH V + +F+ G L SGS D+ + WD + + S H
Sbjct: 91 VRPVTRCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKS-HKSW 149
Query: 60 IFQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP--GSPY 117
+ P D KI ++ +G++ + + G K L +H+ + LA +P P
Sbjct: 150 VLCIAWSP--DATKIASACKNGEICIWNA-KTGEQIGKTLKRHKQWITSLAWQPMHKDPT 206
Query: 118 --IIYSCGEDGFVQHFDLRSDSATR 140
++ SCG+DG + +D + R
Sbjct: 207 CRLLASCGKDGNIFIWDTVQGTVVR 231
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 132 (51.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 52/186 (27%), Positives = 83/186 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GHK + +++F+ G+F+ SGS D + WD + + F Y GH + R + F+
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAV---RCLRFS 156
Query: 70 DDRKIITSSADGQ-VRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
D K + S+AD V+L + G+M ++ G H G V + P Y++ S D +
Sbjct: 157 PDGKWLASAADDHTVKLWDLTA-GKMMSEFPG-HTGPVNVVEFHPNE-YLLASGSSDRTI 213
Query: 129 QHFDLRSDSATRLFYCSSFSENSKQPMNSIRLN--AIVIDPRNPNYFAVGGSDEYARVYD 186
+ +DL F S E P+ SI N + + V G E R +D
Sbjct: 214 RFWDLEK------FQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGW-EPERCFD 266
Query: 187 IRKCHW 192
+ HW
Sbjct: 267 VVLVHW 272
Score = 45 (20.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 20/77 (25%), Positives = 29/77 (37%)
Query: 307 GKLVRLMVGDRHVVNQLEPHPHIPM-------FATCGIEKTVKLWAPMPTDFPPLPDNA- 358
G + R V D Q PHP P+ C + VK + P D+
Sbjct: 309 GTVARDPVQDSRPPTQQPPHPSAPLRRIYERPSTACSKPQRVKQNSESERRSPSSEDDRD 368
Query: 359 EKIMKANKQGREDHSRI 375
E+ +A Q ED++ I
Sbjct: 369 ERESRAEIQNAEDYNEI 385
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 269 SGHRNSQTVKGV 280
S H+N TV+GV
Sbjct: 512 SRHKNLDTVRGV 523
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 137 (53.3 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 41/140 (29%), Positives = 66/140 (47%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNI 60
M L +GH+G V + FN G+ LVSGS D VI WD F L GH D I
Sbjct: 88 MSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFR-LRGHRDQI 146
Query: 61 FQTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIY 120
+++ ++ +ITSS DG +++ + T +G H+ ++ + V P +
Sbjct: 147 TSVKLLERSNH--LITSSKDGFIKIWDTETQHCIQTI-VG-HRNPIWGIDVNPDETRLC- 201
Query: 121 SCGEDGFVQHFDLRSDSATR 140
SC D ++ + + S+ R
Sbjct: 202 SCTSDNQIRFWRIPSNERQR 221
Score = 46 (21.3 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 14/62 (22%), Positives = 26/62 (41%)
Query: 283 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 342
F P + +V+ G+ G + +++ V + V L P + + G +K VK
Sbjct: 443 FAPGNLHVIVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVK 502
Query: 343 LW 344
W
Sbjct: 503 FW 504
Score = 38 (18.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 258 DLQKREEPQVYSGHRNSQTVKG---VNFFG-PND 287
D K EE + R+ QT+K V FF ND
Sbjct: 320 DTMKLEEISIVEEMRHRQTIKTSSKVRFFSFGND 353
Score = 37 (18.1 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 11/55 (20%), Positives = 22/55 (40%)
Query: 290 VMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
+++GS ++ IW G + + Q+ P F + +K +K W
Sbjct: 588 IITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKDKRIKYW 642
>TAIR|locus:2096254 [details] [associations]
symbol:LRS1 "AT3G05090" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010311 KO:K15361
InterPro:IPR021772 Pfam:PF11816 GO:GO:0080008 HOGENOM:HOG000007343
OMA:NRLYSAG EMBL:AY056292 EMBL:AY127022 EMBL:AY142674 EMBL:BT000631
EMBL:AK226843 IPI:IPI00517137 RefSeq:NP_566246.1 RefSeq:NP_850516.1
UniGene:At.48620 ProteinModelPortal:Q93ZS6 SMR:Q93ZS6 PaxDb:Q93ZS6
PRIDE:Q93ZS6 EnsemblPlants:AT3G05090.1 EnsemblPlants:AT3G05090.2
GeneID:819671 KEGG:ath:AT3G05090 TAIR:At3g05090 InParanoid:Q93ZS6
PhylomeDB:Q93ZS6 ProtClustDB:CLSN2688081 ArrayExpress:Q93ZS6
Genevestigator:Q93ZS6 Uniprot:Q93ZS6
Length = 753
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 39/130 (30%), Positives = 63/130 (48%)
Query: 12 GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD 71
GHK V A+ N TG LVSG +K++ WD + + L GH DN+ + ++ T
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMK-LRGHTDNV-RVLLLDSTG- 267
Query: 72 RKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHF 131
R ++ S+D +RL + + + T + H V+ LA P ++ YS G D +
Sbjct: 268 RFCLSGSSDSMIRLWDLGQQRCLHTYAV--HTDSVWALACNPSFSHV-YSGGRDQCLYLT 324
Query: 132 DLRSDSATRL 141
DL + + L
Sbjct: 325 DLATRESVLL 334
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 93 (37.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 32/113 (28%), Positives = 53/113 (46%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ C+N+V+F+ + +VS S+D + WD++ + + L GH N Q + F
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERT-LKGHT-NAVQD--IDFD 157
Query: 70 DDRKIITS-SADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYS 121
++ S SAD ++L F+ K L H V + P +I S
Sbjct: 158 KTGNLLASCSADLTIKLWD-FQTYDC-VKTLHGHDHNVSCVRFTPSGDQLISS 208
Score = 86 (35.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 30/98 (30%), Positives = 45/98 (45%)
Query: 7 CGK-LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRI 65
C K LHGH V+ V F +GD L+S S DK + W+ L GH D + R
Sbjct: 182 CVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWE-AATGYCIKTLVGHEDWV---RK 237
Query: 66 MPFTDDRKIITSSADGQ-VRLGQIFEDGRMDTKRLGKH 102
+ ++D I S ++ Q ++ I + + T R H
Sbjct: 238 ITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSH 275
Score = 81 (33.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 268 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM-VGDRHVVNQLEPH 326
Y GH N V+ V F P ++++S D + +W G+ ++ + H ++ L+
Sbjct: 342 YIGHDN--WVRAVRFH-PCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFC 398
Query: 327 PHIPMFATCGIEKTVKLW 344
H P AT G++ +K+W
Sbjct: 399 LHNPHIATGGVDDVIKVW 416
Score = 66 (28.3 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 289 YVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
Y+ +GS + IW+ G+ + +G + V + HP + G +KT+++W
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVW 373
>UNIPROTKB|Q13347 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9606 "Homo sapiens" [GO:0006413 "translational
initiation" evidence=IC;IDA;TAS] [GO:0003743 "translation
initiation factor activity" evidence=IC;IDA] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743
GO:GO:0005852 Reactome:REACT_1762 HOGENOM:HOG000231322 KO:K03246
HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900 OMA:ATVAGWS
OrthoDB:EOG4HX519 EMBL:U39067 EMBL:U36764 EMBL:BC000413
EMBL:BC003140 IPI:IPI00012795 PIR:S60335 RefSeq:NP_003748.1
UniGene:Hs.530096 ProteinModelPortal:Q13347 SMR:Q13347
DIP:DIP-31116N IntAct:Q13347 MINT:MINT-5004513 STRING:Q13347
PhosphoSite:Q13347 DMDM:2494895 DOSAC-COBS-2DPAGE:Q13347 OGP:Q13347
PaxDb:Q13347 PeptideAtlas:Q13347 PRIDE:Q13347 DNASU:8668
Ensembl:ENST00000373586 GeneID:8668 KEGG:hsa:8668 UCSC:uc001bur.4
GeneCards:GC01P032687 HGNC:HGNC:3272 HPA:HPA029939 HPA:HPA029940
MIM:603911 neXtProt:NX_Q13347 PharmGKB:PA162384875
InParanoid:Q13347 PhylomeDB:Q13347 ChiTaRS:EIF3I GenomeRNAi:8668
NextBio:32515 ArrayExpress:Q13347 Bgee:Q13347 CleanEx:HS_EIF3I
Genevestigator:Q13347 GermOnline:ENSG00000084623 Uniprot:Q13347
Length = 325
Score = 101 (40.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 36/132 (27%), Positives = 56/132 (42%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ + +++N GD L + + D +V W + E+ GH ++ +
Sbjct: 6 LQGHERSITQIKYNREGDLLFTVAKDPIVNVW-YSVNGERLGTYMGHTGAVWC--VDADW 62
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSC----GED 125
D + ++T SAD RL E G+ L K V + G I++S G
Sbjct: 63 DTKHVLTGSADNSCRLWDC-ETGKQ--LALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 126 GFVQHFDLRSDS 137
FV FDLR S
Sbjct: 120 CFVSFFDLRDPS 131
Score = 69 (29.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 264 EPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK-LVRLMVGDRHVVNQ 322
EP + +S+ V +GP E +++G + G L + K G+ LV + R + N
Sbjct: 137 EPYMKIPCNDSKITSAV--WGPLGECIIAGHESGELNQYSAKSGEVLVNVKEHSRQI-ND 193
Query: 323 LEPHPHIPMFATCGIEKTVKLW 344
++ + MF T + T KL+
Sbjct: 194 IQLSRDMTMFVTASKDNTAKLF 215
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 332 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 392 SVSEDNIMQ 400
>ASPGD|ASPL0000040628 [details] [associations]
symbol:AN2997 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016282
"eukaryotic 43S preinitiation complex" evidence=IEA] [GO:0071541
"eukaryotic translation initiation factor 3 complex, eIF3m"
evidence=IEA] [GO:0034399 "nuclear periphery" evidence=IEA]
[GO:0071540 "eukaryotic translation initiation factor 3 complex,
eIF3e" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0003743 HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008
OMA:ATVAGWS RefSeq:XP_660601.1 ProteinModelPortal:Q5B8Y3
STRING:Q5B8Y3 EnsemblFungi:CADANIAT00010083 GeneID:2874320
KEGG:ani:AN2997.2 OrthoDB:EOG44QX8Q Uniprot:Q5B8Y3
Length = 336
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 30/79 (37%), Positives = 41/79 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ +N ++FN GD L S + DK+V W W E+ SGHL I+ + P T
Sbjct: 6 LAGHERSLNQIKFNRDGDLLFSVAKDKIVCAW-WSANGERLGTYSGHLGAIWTVDVSPNT 64
Query: 70 DDRKIITSSADGQVRLGQI 88
+ T SAD VRL +
Sbjct: 65 V--LLATGSADNSVRLWNV 81
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 115 (45.5 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 12 GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD 71
GHK V +V+F+ G+ L S S D+ V W D+R KFS H + R + F+ D
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWI-PDKRGKFSEFKAHTAPV---RSVDFSAD 71
Query: 72 RKII-TSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQH 130
+ + T+S D +++ ++ + + H R K + + G +I SC ED ++
Sbjct: 72 GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD-GR--LIVSCSEDKTIKI 128
Query: 131 FDLRSDSATRLF 142
+D + F
Sbjct: 129 WDTTNKQCVNNF 140
Score = 57 (25.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 279 GVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG 336
GVN F P+ Y+++ S G L I G+L+ + G V + +FA+ G
Sbjct: 188 GVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGG 247
Query: 337 IEKTVKLW 344
+ V LW
Sbjct: 248 ADTQVLLW 255
Score = 45 (20.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 274 SQTVKGVNF--FGPNDEYVMS-GSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIP 330
S +V NF F P+ + S GSD + +W + KL++ VN + HP
Sbjct: 141 SDSVGFANFVDFNPSGTCIASAGSD-QTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGN 199
Query: 331 MFATCGIEKTVKL 343
T + T+K+
Sbjct: 200 YLITASSDGTLKI 212
>UNIPROTKB|F1SV90 [details] [associations]
symbol:EIF3I "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006413 "translational initiation" evidence=IEA]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006413 KO:K03246 CTD:8668
GeneTree:ENSGT00630000089849 OMA:ATVAGWS EMBL:FP102820
RefSeq:NP_001231553.1 UniGene:Ssc.17315 Ensembl:ENSSSCT00000004007
GeneID:100521499 KEGG:ssc:100521499 Uniprot:F1SV90
Length = 325
Score = 102 (41.0 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 42/162 (25%), Positives = 65/162 (40%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ + +++N GD L + + D +V W + E+ GH ++ +
Sbjct: 6 LQGHERSITQIKYNREGDLLFTVAKDPIVNVW-YSVNGERLGTYMGHTGAVWC--VDADW 62
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSC----GED 125
D + ++T SAD RL E G+ L K V + G I++S G
Sbjct: 63 DTKHVLTGSADNSCRLWDC-ETGKQ--LALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 126 GFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP 167
FV FDLR S S K P N ++ + V P
Sbjct: 120 CFVSFFDLRDPSQI-----DSNEPYMKIPCNDSKITSAVWGP 156
Score = 67 (28.6 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 264 EPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK-LVRLMVGDRHVVNQ 322
EP + +S+ V +GP E +++G + G L + K G+ LV + R + N
Sbjct: 137 EPYMKIPCNDSKITSAV--WGPLGECIIAGHEGGELNQYSAKSGEVLVNVKEHSRQI-ND 193
Query: 323 LEPHPHIPMFATCGIEKTVKLW 344
++ + MF T + T KL+
Sbjct: 194 IQLSRDMTMFVTASKDNTAKLF 215
>UNIPROTKB|Q5ZJW8 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0031572 "G2
DNA damage checkpoint" evidence=ISS] [GO:0031465 "Cul4B-RING
ubiquitin ligase complex" evidence=ISS] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0019985 "translesion
synthesis" evidence=ISS] [GO:0009411 "response to UV" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006513 "protein monoubiquitination" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000209 "protein polyubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0004842 GO:GO:0000209
GO:GO:0031572 GO:GO:0006513 GO:GO:0031464 GO:GO:0031465
GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514 EMBL:AJ720316
IPI:IPI00592297 RefSeq:NP_001026219.1 UniGene:Gga.20498
ProteinModelPortal:Q5ZJW8 STRING:Q5ZJW8 Ensembl:ENSGALT00000015990
GeneID:421373 KEGG:gga:421373 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 InParanoid:Q5ZJW8 OMA:ICTYFHR
OrthoDB:EOG4N5VWH NextBio:20824150 Uniprot:Q5ZJW8
Length = 720
Score = 122 (48.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 52/178 (29%), Positives = 83/178 (46%)
Query: 174 AVGGSDEYARVYDIRKCHWYSPISSDTPVDT---FCPRHLIGKNNIHITGLAYSNT-SEL 229
+ G D +V+D+RK Y+ D PV + F P K + + L +T + L
Sbjct: 229 SAGAVDGVIKVWDLRKN--YAAYRQD-PVPSKSFFYPGTSTRK--LGYSSLVLDSTGANL 283
Query: 230 LISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEY 289
+ D+ +Y+F NM + L P V+SGH+NS T + P+D++
Sbjct: 284 FANCTDDSIYMF--NM----TSLKTFPV--------AVFSGHQNS-TFYIKSSISPDDQF 328
Query: 290 VMSGS-DCGHLFIWKKKGGKLV-RLMVGDRHVVNQLEPHPH-IPMFATCGIEKTVKLW 344
++SGS DC + +IWK L R++VG V + P ATC + TV++W
Sbjct: 329 LVSGSSDC-NAYIWKVSEPSLPPRILVGHSQEVTSIAWCPSDFTKIATCSDDNTVRIW 385
Score = 55 (24.4 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 19/76 (25%), Positives = 36/76 (47%)
Query: 113 PGSPYIIYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNY 172
P +++ E+GFV+ +D + + T+L S+ + N++ A V P
Sbjct: 57 PNFEHVLAVANEEGFVRLYDTEAQNTTKLI-----SKEWQAHSNAVFDLAWV--PGEHRI 109
Query: 173 FAVGGSDEYARVYDIR 188
G D+ A+V+D+R
Sbjct: 110 VTASG-DQTAKVWDVR 124
Score = 49 (22.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/122 (23%), Positives = 48/122 (39%)
Query: 74 IITSSADGQVRLGQIFEDGRMDTKRLGK----HQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
+ ++ +G VRL + + TK + K H V+ LA PG I+ + G D +
Sbjct: 63 LAVANEEGFVRLYDT--EAQNTTKLISKEWQAHSNAVFDLAWVPGEHRIVTASG-DQTAK 119
Query: 130 HFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRK 189
+D+R+ L C + L ++ F GG D V+D R
Sbjct: 120 VWDVRAGEL--LGICKG---------HQCSLKSVAFSRFEKAVFCTGGRDGNIMVWDTR- 167
Query: 190 CH 191
C+
Sbjct: 168 CN 169
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ P +
Sbjct: 262 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 321
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 322 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 381
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 382 SVSEDNIMQ 390
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ P +
Sbjct: 262 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 321
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 322 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 381
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 382 SVSEDNIMQ 390
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ P +
Sbjct: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNET 329
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 330 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 389
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 390 SVSEDNIMQ 398
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ P +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 331 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 390
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 391 SVSEDNIMQ 399
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ P +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 331 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 390
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 391 SVSEDNIMQ 399
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ P +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 331 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 390
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 391 SVSEDNIMQ 399
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ P +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 331 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 390
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 391 SVSEDNIMQ 399
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ P +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 331 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 390
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 391 SVSEDNIMQ 399
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ P +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNET 330
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 331 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 390
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 391 SVSEDNIMQ 399
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ P +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNET 330
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 331 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 390
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 391 SVSEDNIMQ 399
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ P +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 331 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 390
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 391 SVSEDNIMQ 399
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ P +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 331 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 390
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 391 SVSEDNIMQ 399
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 38/129 (29%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 335
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P+II
Sbjct: 336 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIIC 395
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 396 SVSEDNIMQ 404
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 110 (43.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 53/213 (24%), Positives = 92/213 (43%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVR 84
+G+++ G D + ++ K R + F DD +I+TSS D
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 85 LGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFVQHFDLRSDSATRLFY 143
L I E G+ T G H G V L++ P + ++ +C D + +D+R + F
Sbjct: 168 LWDI-ETGQQTTTFTG-HTGDVMSLSLAPDTRLFVSGAC--DASAKLWDVREGMCRQTF- 222
Query: 144 CSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 203
+ E+ +NAI P N N FA G D R++D+R +D +
Sbjct: 223 --TGHESD--------INAICFFP-NGNAFATGSDDATCRLFDLR---------ADQELM 262
Query: 204 TFCPRHLIGKNNIHITGLAYSNTSELLIS-YND 235
T+ ++I IT +++S + LL++ Y+D
Sbjct: 263 TYSHDNII----CGITSVSFSKSGRLLLAGYDD 291
Score = 58 (25.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 110 (43.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 53/213 (24%), Positives = 92/213 (43%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVR 84
+G+++ G D + ++ K R + F DD +I+TSS D
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 85 LGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFVQHFDLRSDSATRLFY 143
L I E G+ T G H G V L++ P + ++ +C D + +D+R + F
Sbjct: 168 LWDI-ETGQQTTTFTG-HTGDVMSLSLAPDTRLFVSGAC--DASAKLWDVREGMCRQTF- 222
Query: 144 CSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 203
+ E+ +NAI P N N FA G D R++D+R +D +
Sbjct: 223 --TGHESD--------INAICFFP-NGNAFATGSDDATCRLFDLR---------ADQELM 262
Query: 204 TFCPRHLIGKNNIHITGLAYSNTSELLIS-YND 235
T+ ++I IT +++S + LL++ Y+D
Sbjct: 263 TYSHDNII----CGITSVSFSKSGRLLLAGYDD 291
Score = 58 (25.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 110 (43.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 53/213 (24%), Positives = 92/213 (43%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVR 84
+G+++ G D + ++ K R + F DD +I+TSS D
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 85 LGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFVQHFDLRSDSATRLFY 143
L I E G+ T G H G V L++ P + ++ +C D + +D+R + F
Sbjct: 168 LWDI-ETGQQTTTFTG-HTGDVMSLSLAPDTRLFVSGAC--DASAKLWDVREGMCRQTF- 222
Query: 144 CSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 203
+ E+ +NAI P N N FA G D R++D+R +D +
Sbjct: 223 --TGHESD--------INAICFFP-NGNAFATGSDDATCRLFDLR---------ADQELM 262
Query: 204 TFCPRHLIGKNNIHITGLAYSNTSELLIS-YND 235
T+ ++I IT +++S + LL++ Y+D
Sbjct: 263 TYSHDNII----CGITSVSFSKSGRLLLAGYDD 291
Score = 58 (25.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 110 (43.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 53/213 (24%), Positives = 92/213 (43%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVR 84
+G+++ G D + ++ K R + F DD +I+TSS D
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 85 LGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFVQHFDLRSDSATRLFY 143
L I E G+ T G H G V L++ P + ++ +C D + +D+R + F
Sbjct: 168 LWDI-ETGQQTTTFTG-HTGDVMSLSLAPDTRLFVSGAC--DASAKLWDVREGMCRQTF- 222
Query: 144 CSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 203
+ E+ +NAI P N N FA G D R++D+R +D +
Sbjct: 223 --TGHESD--------INAICFFP-NGNAFATGSDDATCRLFDLR---------ADQELM 262
Query: 204 TFCPRHLIGKNNIHITGLAYSNTSELLIS-YND 235
T+ ++I IT +++S + LL++ Y+D
Sbjct: 263 TYSHDNII----CGITSVSFSKSGRLLLAGYDD 291
Score = 58 (25.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 110 (43.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 53/213 (24%), Positives = 92/213 (43%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVR 84
+G+++ G D + ++ K R + F DD +I+TSS D
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 85 LGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFVQHFDLRSDSATRLFY 143
L I E G+ T G H G V L++ P + ++ +C D + +D+R + F
Sbjct: 168 LWDI-ETGQQTTTFTG-HTGDVMSLSLAPDTRLFVSGAC--DASAKLWDVREGMCRQTF- 222
Query: 144 CSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 203
+ E+ +NAI P N N FA G D R++D+R +D +
Sbjct: 223 --TGHESD--------INAICFFP-NGNAFATGSDDATCRLFDLR---------ADQELM 262
Query: 204 TFCPRHLIGKNNIHITGLAYSNTSELLIS-YND 235
T+ ++I IT +++S + LL++ Y+D
Sbjct: 263 TYSHDNII----CGITSVSFSKSGRLLLAGYDD 291
Score = 58 (25.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 115 (45.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 12 GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD 71
GHK V +V+F+ G+ L S S D+ V W D+R KFS H + R + F+ D
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWI-PDKRGKFSEFKAHTAPV---RSVDFSAD 113
Query: 72 RKII-TSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQH 130
+ + T+S D +++ ++ + + H R K + + G +I SC ED ++
Sbjct: 114 GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD-GR--LIVSCSEDKTIKI 170
Query: 131 FDLRSDSATRLF 142
+D + F
Sbjct: 171 WDTTNKQCVNNF 182
Score = 57 (25.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 279 GVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG 336
GVN F P+ Y+++ S G L I G+L+ + G V + +FA+ G
Sbjct: 230 GVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGG 289
Query: 337 IEKTVKLW 344
+ V LW
Sbjct: 290 ADTQVLLW 297
Score = 45 (20.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 274 SQTVKGVNF--FGPNDEYVMS-GSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIP 330
S +V NF F P+ + S GSD + +W + KL++ VN + HP
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSD-QTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGN 241
Query: 331 MFATCGIEKTVKL 343
T + T+K+
Sbjct: 242 YLITASSDGTLKI 254
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 127 (49.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 237 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 296
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 297 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 356
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 357 SVSEDNIMQ 365
>UNIPROTKB|Q5E966 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9913 "Bos taurus" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743
GO:GO:0005852 HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008
EMBL:BT021054 EMBL:BC103177 IPI:IPI00692672 RefSeq:NP_001015628.1
UniGene:Bt.37139 ProteinModelPortal:Q5E966 STRING:Q5E966
PRIDE:Q5E966 Ensembl:ENSBTAT00000019134 GeneID:521747
KEGG:bta:521747 CTD:8668 GeneTree:ENSGT00630000089849
HOVERGEN:HBG000900 InParanoid:Q5E966 OMA:ATVAGWS OrthoDB:EOG4HX519
NextBio:20873359 Uniprot:Q5E966
Length = 325
Score = 101 (40.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 36/132 (27%), Positives = 56/132 (42%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ + +++N GD L + + D +V W + E+ GH ++ +
Sbjct: 6 LQGHERSITQIKYNREGDLLFTVAKDPIVNVW-YSVNGERLGTYMGHTGAVWC--VDADW 62
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSC----GED 125
D + ++T SAD RL E G+ L K V + G I++S G
Sbjct: 63 DTKHVLTGSADNSCRLWDC-ETGKQ--LALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 126 GFVQHFDLRSDS 137
FV FDLR S
Sbjct: 120 CFVSFFDLRDPS 131
Score = 67 (28.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 264 EPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK-LVRLMVGDRHVVNQ 322
EP + +S+ V +GP E +++G + G L + K G+ LV + R + N
Sbjct: 137 EPYMRIPCNDSKITSAV--WGPLGECIIAGHEGGELNQYSAKSGEVLVNVKEHSRQI-ND 193
Query: 323 LEPHPHIPMFATCGIEKTVKLW 344
++ + MF T + T KL+
Sbjct: 194 IQLSRDMTMFVTASKDNTAKLF 215
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 128 (50.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ P +
Sbjct: 315 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 374
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 375 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 434
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 435 SVSEDNIMQ 443
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 128 (50.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 37/129 (28%), Positives = 57/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ P +
Sbjct: 315 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 374
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 375 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 434
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 435 SVSEDNIMQ 443
>RGD|1306535 [details] [associations]
symbol:Dcaf5 "DDB1 and CUL4 associated factor 5" species:10116
"Rattus norvegicus" [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1306535 GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 GO:GO:0080008 HOGENOM:HOG000060080
HOVERGEN:HBG057544 OrthoDB:EOG44MXRG UniGene:Rn.47944 EMBL:BC079428
IPI:IPI00367683 ProteinModelPortal:Q68FQ3 UCSC:RGD:1306535
InParanoid:Q68FQ3 Genevestigator:Q68FQ3 Uniprot:Q68FQ3
Length = 658
Score = 130 (50.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 284 GPNDEYVMSGSDCGHLFIWK-----KKGG--KLVR--LMV--GDRHVVNQLEPHPHIPMF 332
G D+Y++SGSD +L++WK + GG ++V MV G R +VNQ+ +PH M
Sbjct: 1 GDRDQYILSGSDDFNLYMWKVPADPEAGGLGRVVNGAFMVLKGHRSIVNQVRFNPHTYMI 60
Query: 333 ATCGIEKTVKLWAP 346
+ G+EK +K+W+P
Sbjct: 61 CSSGVEKIIKIWSP 74
Score = 44 (20.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 20/73 (27%), Positives = 29/73 (39%)
Query: 345 APMPTDFPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLA----YRER 399
A +P PP D +A+ S + TP R+Q L+ Y+++
Sbjct: 175 ASLPRSPPPTVDESADNAFHLGPLRVTTTSAVVSTPATPTCEDAASRQQRLSALRRYQDK 234
Query: 400 RYNAADFESDEEE 412
R A ESD EE
Sbjct: 235 RLLALSNESDSEE 247
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 332 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 392 SVSEDNIMQ 400
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 332 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 392 SVSEDNIMQ 400
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 332 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 392 SVSEDNIMQ 400
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 332 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 392 SVSEDNIMQ 400
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 332 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 392 SVSEDNIMQ 400
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 332 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 392 SVSEDNIMQ 400
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 332 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 392 SVSEDNIMQ 400
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 332 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 392 SVSEDNIMQ 400
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 332 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 392 SVSEDNIMQ 400
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 332 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 392 SVSEDNIMQ 400
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 332 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 392 SVSEDNIMQ 400
>UNIPROTKB|Q2KJH4 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9913
"Bos taurus" [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 InterPro:IPR011045 SUPFAM:SSF50974
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000162559 HOVERGEN:HBG000780 EMBL:BC105341
IPI:IPI00716638 RefSeq:NP_001039811.1 UniGene:Bt.59546
ProteinModelPortal:Q2KJH4 STRING:Q2KJH4 PRIDE:Q2KJH4 GeneID:533223
KEGG:bta:533223 CTD:9948 OrthoDB:EOG4WH8KB NextBio:20875962
Uniprot:Q2KJH4
Length = 606
Score = 129 (50.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 41/145 (28%), Positives = 70/145 (48%)
Query: 8 GKLHGHKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIM 66
G++ GH +N+V+ + + LV+GSDD F++ + KF+ +S H + R
Sbjct: 140 GEITGHNKVINSVDIKQSRPYRLVTGSDDNCAAFFEGPPFKFKFT-ISDHGRFVNCVRFS 198
Query: 67 PFTDDRKIITSSADGQVRLGQIFEDGRMDTK--RLG---KHQGRVYKLAVEPGSPYIIYS 121
P D + T+SADGQ+ DG+ K LG H G +Y ++ P S +++ +
Sbjct: 199 P--DGNRFATASADGQI----FIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLLSA 252
Query: 122 CGEDGFVQHFDLRSDSATRLFYCSS 146
G D + +D+ +S F S
Sbjct: 253 SG-DKTSKIWDVNVNSVVNTFTMGS 276
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 127 (49.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 13 HKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD- 70
H VN + FN +F L +GS DK V WD ++ + K H D IFQ + P +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 71 -------DRKIIT--SSADGQVRLGQIFEDGRMDTKRL-GKHQGRVYKLAVEPGSPYIIY 120
DR++ S G+ + + EDG + + G H ++ + P P++I
Sbjct: 332 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
Query: 121 SCGEDGFVQ 129
S ED +Q
Sbjct: 392 SVSEDNIMQ 400
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 137 (53.3 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 47/182 (25%), Positives = 84/182 (46%)
Query: 11 HGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD 70
+GHK + ++F+ TG L+SGS D +I WD + L H D+I T +
Sbjct: 118 NGHKAAITLLQFDGTGTRLISGSKDSNIIVWDLVGEVGLYK-LRSHKDSI--TGFWCQGE 174
Query: 71 DRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ- 129
D +I++S DG ++L + ++T H G + LAV+ ++ + G D V+
Sbjct: 175 DW-LISTSKDGMIKLWDLKTHQCIETHIA--HTGECWGLAVKDD---LLITTGTDSQVKI 228
Query: 130 -HFDLRSDS-ATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDI 187
D+ +D +L F + SKQ +++ I ++F + +D+ + I
Sbjct: 229 WKLDIENDKMGGKLTEMGIFEKQSKQ--RGLKIEFITNSSDKTSFFYIQNADKTIETFRI 286
Query: 188 RK 189
RK
Sbjct: 287 RK 288
Score = 40 (19.1 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 241 FEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLF 300
+EK P+PL +LQ G R V+ ++ +D +++ + G L
Sbjct: 369 YEKRDPTSPAPLKTHTIELQ---------GQRTD--VRSIDI--SDDNKLLATASNGSLK 415
Query: 301 IWKKKGGKLVR 311
IW K K +R
Sbjct: 416 IWNIKTHKCIR 426
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 10/59 (16%), Positives = 25/59 (42%)
Query: 286 NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
+ + +++ S ++ IW G + + + + ++ P F +C + VK W
Sbjct: 584 DSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMNVKFLPQSHNFFSCSKDAVVKYW 642
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 109 (43.4 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L+GH + V F+ +++S SDD+ + W+W++R+E + L+GH + + P
Sbjct: 91 LNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNRQE-IACLTGHNHYVMSAQFHPSE 149
Query: 70 DDRKIITSSADGQVRLGQI 88
D I+++S D VR+ I
Sbjct: 150 D--LIVSASLDQTVRVWDI 166
Score = 72 (30.4 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 278 KGVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP--HPHIPMFA 333
KGVN+ F P ++S D + +W+ K + H N L HPH +
Sbjct: 214 KGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQDLIL 273
Query: 334 TCGIEKTVKLW 344
+ +KT+++W
Sbjct: 274 SVSDDKTIRVW 284
>UNIPROTKB|F1PPR0 [details] [associations]
symbol:EIF3I "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006413 "translational initiation"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006413 GeneTree:ENSGT00630000089849
OMA:ATVAGWS EMBL:AAEX03001657 Ensembl:ENSCAFT00000017014
Uniprot:F1PPR0
Length = 325
Score = 100 (40.3 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 36/132 (27%), Positives = 56/132 (42%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH+ + +++N GD L + + D +V W + E+ GH ++ +
Sbjct: 6 LQGHERSITQIKYNREGDLLFTVAKDPIVNVW-YSVNGERLGTYMGHSGAVWC--VDADW 62
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSC----GED 125
D + ++T SAD RL E G+ L K V + G I++S G
Sbjct: 63 DTKHVLTGSADNSCRLWDC-ETGKQ--LALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 126 GFVQHFDLRSDS 137
FV FDLR S
Sbjct: 120 CFVSFFDLRDPS 131
Score = 67 (28.6 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 264 EPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK-LVRLMVGDRHVVNQ 322
EP + +S+ V +GP E +++G + G L + K G+ LV + R + N
Sbjct: 137 EPYMKIPCNDSKITSAV--WGPLGECIIAGHEGGELNQYSAKSGEVLVNVKEHSRQI-ND 193
Query: 323 LEPHPHIPMFATCGIEKTVKLW 344
++ + MF T + T KL+
Sbjct: 194 IQLSRDMTMFVTASKDNTAKLF 215
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 94 (38.1 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 33/133 (24%), Positives = 53/133 (39%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
LHGH G V V F+ ++L+S S+D + W + Y GH ++ T+ PF
Sbjct: 495 LHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGY-KGHNYPVWDTQFSPF- 552
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQ 129
++ D RL D + H V P S Y+ D V+
Sbjct: 553 -GYYFVSGGHDRVARLWAT--DHYQPLRIFAGHLADVTCTRFHPNSNYVATG-SSDRTVR 608
Query: 130 HFDLRSDSATRLF 142
+D+ + + R+F
Sbjct: 609 LWDVLNGNCVRIF 621
Score = 83 (34.3 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 20/82 (24%), Positives = 41/82 (50%)
Query: 266 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 325
++++GH+ + + F PN +++ SGS G + +W G ++ + G + L+
Sbjct: 619 RIFTGHKGP--IHSLAF-SPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKF 675
Query: 326 HPHIPMFATCGIEKTVKLWAPM 347
+ A+ I+ TV+LW M
Sbjct: 676 SRDGEIIASGSIDNTVRLWDVM 697
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 129 (50.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GHK + +++F+ G+F+ SGS D + WD + + F Y GH + R + F+
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAV---RCLRFS 156
Query: 70 DDRKIITSSADGQ-VRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
D K + S+AD V+L + G+M ++ G H G V + P Y++ S D +
Sbjct: 157 PDGKWLASAADDHTVKLWDLTA-GKMMSEFPG-HTGPVNVVEFHPNE-YLLASGSSDRTI 213
Query: 129 QHFDLRSDSATRLFYCSSFSENSKQPMNSIRLN 161
+ +DL F S E P+ S+ N
Sbjct: 214 RFWDLEK------FQVVSCIEGEPGPVRSVLFN 240
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 129 (50.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GHK + +++F+ G+F+ SGS D + WD + + F Y GH + R + F+
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAV---RCLRFS 156
Query: 70 DDRKIITSSADGQ-VRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
D K + S+AD V+L + G+M ++ G H G V + P Y++ S D +
Sbjct: 157 PDGKWLASAADDHTVKLWDLTA-GKMMSEFPG-HTGPVNVVEFHPNE-YLLASGSSDRTI 213
Query: 129 QHFDLRSDSATRLFYCSSFSENSKQPMNSIRLN 161
+ +DL F S E P+ S+ N
Sbjct: 214 RFWDLEK------FQVVSCIEGEPGPVRSVLFN 240
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 129 (50.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GHK + +++F+ G+F+ SGS D + WD + + F Y GH + R + F+
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAV---RCLRFS 156
Query: 70 DDRKIITSSADGQ-VRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
D K + S+AD V+L + G+M ++ G H G V + P Y++ S D +
Sbjct: 157 PDGKWLASAADDHTVKLWDLTA-GKMMSEFPG-HTGPVNVVEFHPNE-YLLASGSSDRTI 213
Query: 129 QHFDLRSDSATRLFYCSSFSENSKQPMNSIRLN 161
+ +DL F S E P+ S+ N
Sbjct: 214 RFWDLEK------FQVVSCIEGEPGPVRSVLFN 240
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 129 (50.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GHK + +++F+ G+F+ SGS D + WD + + F Y GH + R + F+
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY-RGHSQAV---RCLRFS 156
Query: 70 DDRKIITSSADGQ-VRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
D K + S+AD V+L + G+M ++ G H G V + P Y++ S D +
Sbjct: 157 PDGKWLASAADDHTVKLWDLTA-GKMMSEFPG-HTGPVNVVEFHPNE-YLLASGSSDRTI 213
Query: 129 QHFDLRSDSATRLFYCSSFSENSKQPMNSIRLN 161
+ +DL F S E P+ S+ N
Sbjct: 214 RFWDLEK------FQVVSCIEGEPGPVRSVLFN 240
>UNIPROTKB|E1BSG1 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02010822
EMBL:AADN02010823 IPI:IPI00586943 Ensembl:ENSGALT00000025882
OMA:SRETNST Uniprot:E1BSG1
Length = 2293
Score = 102 (41.0 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 46/187 (24%), Positives = 75/187 (40%)
Query: 2 KRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIF 61
+ + + ++ GH V V F+ TG + +GSDD LV W + R F+ L GH I
Sbjct: 177 QHVKMHRRILGHLSSVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGR-LFATLRGHSAEIS 235
Query: 62 QTRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP---GSPYI 118
+ ++ I S D +R+ + + L H G + L P GS
Sbjct: 236 DMAVN--YENTMIAAGSCDKMIRVWCLRTCAPVAV--LHGHTGSITSLQFSPMVKGSLRY 291
Query: 119 IYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGS 178
+ S G DG V + +DS F+E + + + + V + A G +
Sbjct: 292 MVSTGADGNVCFWQWDTDSMKFSNRPVKFTEKPRPGVQMLCSSFSV----GGMFLATGST 347
Query: 179 DEYARVY 185
D R+Y
Sbjct: 348 DHVIRMY 354
Score = 91 (37.1 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 51/253 (20%), Positives = 97/253 (38%)
Query: 6 LCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRI 65
L L GH ++ + N + +GS DK++ W + + L GH +I +
Sbjct: 223 LFATLRGHSAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAP-VAVLHGHTGSITSLQF 281
Query: 66 MPFTDD--RKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCG 123
P R ++++ ADG V Q DT + K R K +P P + C
Sbjct: 282 SPMVKGSLRYMVSTGADGNVCFWQ------WDTDSM-KFSNRPVKFTEKP-RPGVQMLCS 333
Query: 124 EDGFVQHFDLR--SDSATRLFYCSSFSENSKQPMNSIRLNAIVIDP----RNPNYFAVGG 177
F +D R++Y F + + + + +A +D + + F G
Sbjct: 334 SFSVGGMFLATGSTDHVIRMYY---FGSETPERIAELESHADKVDSIQFSNSGDRFISGS 390
Query: 178 SDEYARVYDIRKCHWYS---PISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-Y 233
D AR++ + W S +S P D + + T +A++ +++
Sbjct: 391 RDGTARIWRFEEAEWRSILLDMSDRLPGDMCSDEDKFMRPKV--TMIAWNQDDNYVVTAV 448
Query: 234 NDELVYLFEKNMG 246
N+ L+ ++ + G
Sbjct: 449 NNHLLKVWNSSTG 461
Score = 65 (27.9 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 381 VIMHVLRLQRRQTLAYRERRYNAADFES-DEEEGETYLLGFSDSDASSEGGGNQRE 435
+I RL RR+ YR R N +S DE++G + L F +++ SEG G+ E
Sbjct: 794 IIQSKRRLHRRKYPNYRTRN-NIEQLDSSDEDKGSSIL--FQEAE-ESEGSGSSEE 845
Score = 65 (27.9 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 286 NDEYVMSGSDCGHLF-IWKKKGGKLVRLMVGDRHVVNQLEPHPHIP-MFATCGIEKTVKL 343
+D YV++ + HL +W G+L+ +VG V LE HP + + G + + +
Sbjct: 440 DDNYVVTAVN-NHLLKVWNSSTGQLLHDLVGHADEVFVLETHPFDSRIMLSAGHDGNIFI 498
Query: 344 W 344
W
Sbjct: 499 W 499
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 115 (45.5 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 48/168 (28%), Positives = 72/168 (42%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSY---LSGHLDNIFQTRIMPFTDDRKIITSSADG 81
+G+F+ G D + + K R L GH + R F DD +IITSS D
Sbjct: 8 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCR---FLDDNQIITSSGDT 64
Query: 82 QVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP-GSPYIIYSCGEDGFVQHFDLRSDSATR 140
L I E G+ G H G V L++ P G ++ +C D ++ +D+R DS R
Sbjct: 65 TCALWDI-ETGQQTVGFAG-HSGDVMSLSLAPDGRTFVSGAC--DASIKLWDVR-DSMCR 119
Query: 141 LFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
+ S+ +NA+ P N F G D R++D+R
Sbjct: 120 QTFIGHESD----------INAVAFFP-NGYAFTTGSDDATCRLFDLR 156
Score = 44 (20.5 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 315
DL+ +E +YS H N + G+ F + +++G D + IW G ++ G
Sbjct: 154 DLRADQELLMYS-HDN--IICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAG 210
Query: 316 DRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
+ V+ L AT + +K+W
Sbjct: 211 HDNRVSCLGVTDDGMAVATGSWDSFLKIW 239
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 108 (43.1 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 55/213 (25%), Positives = 88/213 (41%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVR 84
+G+++ G D + + K R + F DD +I+TSS D
Sbjct: 108 SGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 85 LGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFVQHFDLRSDSATRLFY 143
L I E G+ T G H G V L++ P + ++ +C D + +D+R + F
Sbjct: 168 LWDI-ETGQQTTTFAG-HTGDVMSLSLAPDTRLFVSGAC--DASAKLWDIREGMCRQTF- 222
Query: 144 CSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 203
+ E+ +NAI P N N FA G D R++D+R S D +
Sbjct: 223 --TGHESD--------INAICFFP-NGNAFATGSDDATCRLFDLRADQELMVYSHDNII- 270
Query: 204 TFCPRHLIGKNNIHITGLAYSNTSELLIS-YND 235
C G IT +A+S + LL++ Y+D
Sbjct: 271 --C-----G-----ITSVAFSKSGRLLLAGYDD 291
Score = 58 (25.5 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 108 (43.1 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 55/213 (25%), Positives = 89/213 (41%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVR 84
+G+++ G D + ++ K R + F DD +I+TSS D
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 85 LGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFVQHFDLRSDSATRLFY 143
L I E G+ T G H G V L++ P + ++ +C D + +D+R + F
Sbjct: 168 LWDI-ETGQQTTTFAG-HTGDVMSLSLAPDTRLFVSGAC--DASAKLWDVREGMCRQTF- 222
Query: 144 CSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVD 203
+ E+ +NAI P N N FA G D R++D+R S D +
Sbjct: 223 --TGHESD--------INAICFFP-NGNAFATGSDDATCRLFDLRADQELMVYSHDNII- 270
Query: 204 TFCPRHLIGKNNIHITGLAYSNTSELLIS-YND 235
C G IT +A+S + LL++ Y+D
Sbjct: 271 --C-----G-----ITSVAFSKSGRLLLAGYDD 291
Score = 58 (25.5 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD 83
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 124 (48.7 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 38/138 (27%), Positives = 72/138 (52%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH +++V+F+ G +L S S DK + W D + + + L GH + I + ++
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERT-LEGHKEGISD---IAWS 97
Query: 70 DDRKIITSSADGQ-VRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
D K+I S++D + +++ + E G+M K L H+ V+ ++ P S I+ S D V
Sbjct: 98 QDSKLICSASDDKTIKIWDV-ESGKM-VKTLKGHKEYVFGVSFNPQSNLIV-SGSFDENV 154
Query: 129 QHFDLRSDSATRLFYCSS 146
+ +D+ + T++ S
Sbjct: 155 RIWDVNTGECTKMISAHS 172
>UNIPROTKB|Q05BV3 [details] [associations]
symbol:EML5 "Echinoderm microtubule-associated protein-like
5" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0005874 InterPro:IPR005108 Pfam:PF03451
EMBL:AK127024 EMBL:AK128086 EMBL:AL121768 EMBL:AL162171
EMBL:BC032685 EMBL:BC150639 EMBL:AY357725 EMBL:CR933726
IPI:IPI00742831 IPI:IPI00843972 IPI:IPI00923627 IPI:IPI00982557
RefSeq:NP_899243.1 UniGene:Hs.325846 ProteinModelPortal:Q05BV3
SMR:Q05BV3 STRING:Q05BV3 PhosphoSite:Q05BV3 DMDM:215274143
PaxDb:Q05BV3 PRIDE:Q05BV3 Ensembl:ENST00000380664
Ensembl:ENST00000554922 GeneID:161436 KEGG:hsa:161436
UCSC:uc021ryf.1 CTD:161436 GeneCards:GC14M089159 H-InvDB:HIX0026633
H-InvDB:HIX0172351 HGNC:HGNC:18197 neXtProt:NX_Q05BV3
PharmGKB:PA134894613 HOGENOM:HOG000031037 HOVERGEN:HBG107846
InParanoid:Q05BV3 OMA:LMVWTNE GenomeRNAi:161436 NextBio:88068
Bgee:Q05BV3 CleanEx:HS_EML5 Genevestigator:Q05BV3 Uniprot:Q05BV3
Length = 1969
Score = 115 (45.5 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 13 HKGCVNAVEFNSTGDFLVS-GSDDK-LVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD 70
H+ V+AV+F++ G L S G DD V+ WDWK + EK S G D IF ++ P+
Sbjct: 771 HQYGVSAVDFSADGKRLASVGIDDSHTVVLWDWK-KGEKLSIARGSKDKIFVVKMNPYVP 829
Query: 71 DRKIITS 77
D K+IT+
Sbjct: 830 D-KLITA 835
Score = 69 (29.3 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 289 YVMSGSDCGHLFIWKKKGGKLVRLMVGDRH-VVNQLEPHPHIPMFATCGIEKTVKLWAPM 347
+++ G+ G + + K G + L+ G V L HP++P+ AT +KT+++W
Sbjct: 970 HILVGTKNGEI-LEVDKSGPITLLVQGHMEGEVWGLATHPYLPICATVSDDKTLRIWDLS 1028
Query: 348 PT 349
P+
Sbjct: 1029 PS 1030
>CGD|CAL0005343 [details] [associations]
symbol:DOA1 species:5476 "Candida albicans" [GO:0004620
"phospholipase activity" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005343 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004620 GO:GO:0006511
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0044182 GO:GO:1900429
HOGENOM:HOG000174247 KO:K14018 InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 RefSeq:XP_723325.1 RefSeq:XP_723515.1
ProteinModelPortal:Q5APD6 STRING:Q5APD6 GeneID:3634871
GeneID:3635107 KEGG:cal:CaO19.12292 KEGG:cal:CaO19.4829
Uniprot:Q5APD6
Length = 761
Score = 131 (51.2 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 40/135 (29%), Positives = 70/135 (51%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPF 68
+L GH+G V ++ + S G L+S S D I W+ K+ K+ LSGH +++ +++
Sbjct: 92 QLIGHEGNVCSMSY-SHGQ-LISSSWDCTAIVWNLKEFVPKY-ILSGHESSVWDCQVLG- 147
Query: 69 TDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
+D +T SAD +R F G+ + K+ H + KL + G + SC DG +
Sbjct: 148 -EDH-YLTCSADKTIR----FWHGKSEVKQFVGHSDVIRKLLILEGGEQFL-SCSNDGTI 200
Query: 129 QHFDLRSDSATRLFY 143
+ +DL++ + FY
Sbjct: 201 KLWDLQTGKNLQTFY 215
Score = 43 (20.2 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 214 NNIHITGLAYSNTSELLISYNDELVYLFEKN 244
+N + + + ++L SY DE+V +KN
Sbjct: 406 DNPYTVAEKFLSDNDLPASYTDEVVRFLQKN 436
>UNIPROTKB|Q5APD6 [details] [associations]
symbol:DOA1 "Putative uncharacterized protein DOA1"
species:237561 "Candida albicans SC5314" [GO:0004620 "phospholipase
activity" evidence=IMP] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005343 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004620 GO:GO:0006511
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0044182 GO:GO:1900429
HOGENOM:HOG000174247 KO:K14018 InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 RefSeq:XP_723325.1 RefSeq:XP_723515.1
ProteinModelPortal:Q5APD6 STRING:Q5APD6 GeneID:3634871
GeneID:3635107 KEGG:cal:CaO19.12292 KEGG:cal:CaO19.4829
Uniprot:Q5APD6
Length = 761
Score = 131 (51.2 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 40/135 (29%), Positives = 70/135 (51%)
Query: 9 KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPF 68
+L GH+G V ++ + S G L+S S D I W+ K+ K+ LSGH +++ +++
Sbjct: 92 QLIGHEGNVCSMSY-SHGQ-LISSSWDCTAIVWNLKEFVPKY-ILSGHESSVWDCQVLG- 147
Query: 69 TDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
+D +T SAD +R F G+ + K+ H + KL + G + SC DG +
Sbjct: 148 -EDH-YLTCSADKTIR----FWHGKSEVKQFVGHSDVIRKLLILEGGEQFL-SCSNDGTI 200
Query: 129 QHFDLRSDSATRLFY 143
+ +DL++ + FY
Sbjct: 201 KLWDLQTGKNLQTFY 215
Score = 43 (20.2 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 214 NNIHITGLAYSNTSELLISYNDELVYLFEKN 244
+N + + + ++L SY DE+V +KN
Sbjct: 406 DNPYTVAEKFLSDNDLPASYTDEVVRFLQKN 436
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 104 (41.7 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 49/168 (29%), Positives = 71/168 (42%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRRE--KFSY-LSGHLDNIFQTRIMPFTDDRKIITSSADG 81
+G+F+ G D + + K R K S LS H + R F DD I+TSS D
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCR---FLDDNNIVTSSGDT 164
Query: 82 QVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFVQHFDLRSDSATR 140
L I E G+ T +G H G LAV P +I +C D + +D+R + +
Sbjct: 165 TCALWDI-ETGQQKTVFVG-HTGDCMSLAVSPDFKLFISGAC--DASAKLWDVREGTCRQ 220
Query: 141 LFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
F + E+ +NAI P N G D R++D+R
Sbjct: 221 TF---TGHESD--------INAICFFP-NGEAICTGSDDASCRLFDLR 256
Score = 56 (24.8 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWD 83
Score = 42 (19.8 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 20/87 (22%), Positives = 35/87 (40%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
DL+ +E YS + V F + + +G D + IW G+ V ++ G
Sbjct: 254 DLRADQELTAYSDESIICGITSVAF-SLSGRLLFAGYDDFNCNIWDSMKGERVGILSGHD 312
Query: 318 HVVNQLEPHPHIPMFATCGIEKTVKLW 344
+ V+ L AT + +K+W
Sbjct: 313 NRVSCLGVTADGMAVATGSWDSFLKVW 339
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 104 (41.7 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 49/168 (29%), Positives = 71/168 (42%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRRE--KFSY-LSGHLDNIFQTRIMPFTDDRKIITSSADG 81
+G+F+ G D + + K R K S LS H + R F DD I+TSS D
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCR---FLDDNNIVTSSGDT 164
Query: 82 QVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFVQHFDLRSDSATR 140
L I E G+ T +G H G LAV P +I +C D + +D+R + +
Sbjct: 165 TCALWDI-ETGQQKTVFVG-HTGDCMSLAVSPDFKLFISGAC--DASAKLWDVREGTCRQ 220
Query: 141 LFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
F + E+ +NAI P N G D R++D+R
Sbjct: 221 TF---TGHESD--------INAICFFP-NGEAICTGSDDASCRLFDLR 256
Score = 56 (24.8 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWD 83
Score = 42 (19.8 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 20/87 (22%), Positives = 35/87 (40%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 317
DL+ +E YS + V F + + +G D + IW G+ V ++ G
Sbjct: 254 DLRADQELTAYSDESIICGITSVAF-SLSGRLLFAGYDDFNCNIWDSMKGERVGILSGHD 312
Query: 318 HVVNQLEPHPHIPMFATCGIEKTVKLW 344
+ V+ L AT + +K+W
Sbjct: 313 NRVSCLGVTADGMAVATGSWDSFLKVW 339
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 126 (49.4 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 71/311 (22%), Positives = 125/311 (40%)
Query: 1 MKRINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKL--VIFWDW--------------- 43
+K+ + L H+GCVN V G+ + + S +L V WD
Sbjct: 147 LKKPQMTCALVKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQ 206
Query: 44 ---KDRREKFSYLSGHLDNIFQTRIMPFTDDRKIITSSADGQVRLGQIFEDG--RMDTKR 98
+ R F++ GH F P D + T + + EDG ++D +
Sbjct: 207 YEQSEARPVFTF-GGHQQEGFAIDWSPSADG-VLATGDCRRDIHVWTPVEDGTWKVDQRP 264
Query: 99 LGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHFDLRSDSATRLFYCSSFSENSKQP-MNS 157
L H V L P ++ SC D ++ +D R+ C E++ Q +N
Sbjct: 265 LAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKA---CMLTCEDAHQSDVNV 321
Query: 158 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIH 217
I N RN + A GG D Y ++D+R+ S P+ TF +H + H
Sbjct: 322 ISWN------RNEPFIASGGDDGYLHIWDLRQ------FQSKKPIATF--KH----HTDH 363
Query: 218 ITGLAYSNTSELLISY--NDELVYLF----EKNMGLGPSPLSLSPEDLQKREEPQVYSGH 271
IT + +S +++ +D+ + L+ EK++ P ED+ + PQ+ H
Sbjct: 364 ITTVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQ--NEDVLNKLPPQLLFIH 421
Query: 272 RNSQTVKGVNF 282
+ + +K +++
Sbjct: 422 QGQKEIKELHW 432
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 94 (38.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 29/104 (27%), Positives = 44/104 (42%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GH + V F+ G L SGS+D + WD K + L GH ++ P
Sbjct: 37 LEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQT-LEGHSSSVQSVAFSP-- 93
Query: 70 DDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEP 113
+ + + + S+D ++L D T G H RV +A P
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTME-G-HSDRVESVAFSP 135
Score = 76 (31.8 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 283 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 342
F P+ + SGS+ + +W G L + G + + L P+ + A+ + T+K
Sbjct: 205 FSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIK 264
Query: 343 LW 344
LW
Sbjct: 265 LW 266
Score = 71 (30.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 270 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 329
GH N ++ + F PN + + SGS + +W G + G +V + P
Sbjct: 237 GHSNK--IESLAF-SPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDS 293
Query: 330 PMFATCGIEKTVKLWAP 346
+ + + T+KLW P
Sbjct: 294 QLLESGSGDNTIKLWDP 310
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 117 (46.2 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 48/157 (30%), Positives = 67/157 (42%)
Query: 6 LCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRI 65
L + GH G V + F+ T VSG DD V W++K R+ FS L GH+D + R+
Sbjct: 45 LLDRFDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFS-LCGHMDYV---RV 100
Query: 66 MPFTDDRKIITSSADGQ-VRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGE 124
F + I S +D Q +R+ R L H V A P I+ S
Sbjct: 101 CTFHHEYPWILSCSDDQTIRIWNW--QSRNCIAILTGHSHYVMCAAFHPSEDLIV-SASL 157
Query: 125 DGFVQHFD---LRSDSATRLFYCSSFSENSKQPMNSI 158
D V+ +D LR +A + S + Q NSI
Sbjct: 158 DQTVRVWDISGLRMKNAAPV--SMSLEDQLAQAHNSI 192
Score = 62 (26.9 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 278 KGVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKL--VRLMVGDRHVVNQLEPHPHIPMFA 333
+GVN+ F P ++S D + +W+ K V G + V+ HPH +
Sbjct: 213 RGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELIL 272
Query: 334 TCGIEKTVKLW 344
+ +KT+++W
Sbjct: 273 SASEDKTIRVW 283
Score = 57 (25.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 312 LMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
++ G VN HP +P+ + G ++ VKLW
Sbjct: 207 VLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLW 239
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 125 (49.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVS-GSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPF 68
+ H VN + FN +FLV+ GS DK V WD ++ + L H D +FQ + P
Sbjct: 264 VEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLGNRLHSLISHTDEVFQVQFSPH 323
Query: 69 TDDRKIITSSADGQV------RLG--QIFEDGRMDTKRL----GKHQGRVYKLAVEPGSP 116
++ + + +D +V R+G Q ED L G H ++ + P P
Sbjct: 324 -NETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPELLFIHGGHTSKISDFSWNPNDP 382
Query: 117 YIIYSCGEDGFVQ 129
+ I S ED +Q
Sbjct: 383 WSIASVAEDNILQ 395
>MGI|MGI:1337100 [details] [associations]
symbol:Wdr1 "WD repeat domain 1" species:10090 "Mus
musculus" [GO:0003779 "actin binding" evidence=ISA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=ISA] [GO:0015629
"actin cytoskeleton" evidence=ISA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1337100 GO:GO:0005737
GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007605 HOVERGEN:HBG000780 CTD:9948
OrthoDB:EOG4WH8KB OMA:LKDQKKC ChiTaRS:WDR1 EMBL:AF020055
IPI:IPI00314748 RefSeq:NP_035845.1 UniGene:Mm.2654
UniGene:Mm.406120 ProteinModelPortal:O88342 SMR:O88342
STRING:O88342 PhosphoSite:O88342 REPRODUCTION-2DPAGE:IPI00314748
REPRODUCTION-2DPAGE:O88342 UCD-2DPAGE:O88342 PaxDb:O88342
PRIDE:O88342 Ensembl:ENSMUST00000005234 GeneID:22388 KEGG:mmu:22388
InParanoid:O88342 NextBio:302759 Bgee:O88342 CleanEx:MM_WDR1
Genevestigator:O88342 GermOnline:ENSMUSG00000005103 Uniprot:O88342
Length = 606
Score = 127 (49.8 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 39/141 (27%), Positives = 68/141 (48%)
Query: 8 GKLHGHKGCVNAVEFNSTGDF-LVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIM 66
G++ GH +N+V+ T + L +GSDD F++ + KF+ + H + R
Sbjct: 140 GEITGHNKVINSVDIKQTRPYRLATGSDDNCAAFFEGPPFKFKFT-IGDHSRFVNCVRFS 198
Query: 67 PFTDDRKIITSSADGQVRLGQIFEDGRMDTK--RLGK---HQGRVYKLAVEPGSPYIIYS 121
P D + T+SADGQ+ DG+ K LG+ H G +Y ++ P S +++ +
Sbjct: 199 P--DGNRFATASADGQI----FIYDGKTGEKVCALGESKAHDGGIYAISWSPDSTHLLSA 252
Query: 122 CGEDGFVQHFDLRSDSATRLF 142
G D + +D+ +S F
Sbjct: 253 SG-DKTSKIWDVNVNSVVSTF 272
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 103 (41.3 bits), Expect = 9.5e-05, Sum P(3) = 9.5e-05
Identities = 49/168 (29%), Positives = 71/168 (42%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRRE--KFSY-LSGHLDNIFQTRIMPFTDDRKIITSSADG 81
+G+F+ G D + + K R K S LS H + R F DD I+TSS D
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCR---FLDDNNIVTSSGDT 164
Query: 82 QVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSP-YIIYSCGEDGFVQHFDLRSDSATR 140
L I E G+ T +G H G LAV P +I +C D + +D+R + +
Sbjct: 165 TCALWDI-ETGQQKTVFVG-HTGDCMSLAVSPDFRLFISGAC--DASAKLWDVREGTCRQ 220
Query: 141 LFYCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR 188
F + E+ +NAI P N G D R++D+R
Sbjct: 221 TF---TGHESD--------INAICFFP-NGEAICTGSDDASCRLFDLR 256
Score = 56 (24.8 bits), Expect = 9.5e-05, Sum P(3) = 9.5e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + + LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWATDSKLLVSASQDGKLIVWD 83
Score = 42 (19.8 bits), Expect = 9.5e-05, Sum P(3) = 9.5e-05
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 258 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 302
D K E + SGH N + GV G V +GS L IW
Sbjct: 298 DSMKCERVGILSGHDNRVSCLGVTADGMA---VATGSWDSFLKIW 339
>ZFIN|ZDB-GENE-050809-116 [details] [associations]
symbol:dcaf11 "ddb1 and cul4 associated factor 11"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050809-116 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
CTD:80344 HOGENOM:HOG000241217 HOVERGEN:HBG055176 KO:K11801
OrthoDB:EOG44TP7K InterPro:IPR017399 PIRSF:PIRSF038135
GeneTree:ENSGT00700000104507 OMA:RMLHQRE EMBL:CR405710
EMBL:BC099999 IPI:IPI00491931 RefSeq:NP_001026845.1
UniGene:Dr.134153 STRING:Q499B0 Ensembl:ENSDART00000002992
GeneID:567578 KEGG:dre:567578 InParanoid:Q499B0 NextBio:20888741
Uniprot:Q499B0
Length = 541
Score = 115 (45.5 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 32/85 (37%), Positives = 46/85 (54%)
Query: 9 KLHGHKGCVNAVEF-NSTGDFLVSGSDDKLVIFWDWK----DRREKFSYLSGHLDNIFQT 63
K+ H+ VNAV F +S+ L SGSDD L WD + DR + +L+GH D I T
Sbjct: 306 KIDAHEDDVNAVAFADSSSQLLFSGSDDALCKVWDRRTLREDRPQPVGHLAGHRDGI--T 363
Query: 64 RIMPFTDDRKIITSSADGQVRLGQI 88
I D R +I++S D ++L +
Sbjct: 364 FIHSKGDARYLISNSKDQTIKLWDV 388
Score = 55 (24.4 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 16/80 (20%), Positives = 31/80 (38%)
Query: 268 YSGHRNSQTVKGVNF---FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLE 324
Y GH T+ F F +++ +G G + I+ G +V + V +
Sbjct: 435 YRGHGVLHTLIRCRFSPEFSTGQKFIYTGCSTGKIVIYDVLTGSVVCKLSNHDACVRDVS 494
Query: 325 PHPHIPMFATCGIEKTVKLW 344
HP+ + + ++LW
Sbjct: 495 WHPYNNNMVSSSWDGAIRLW 514
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 108 (43.1 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 35/132 (26%), Positives = 61/132 (46%)
Query: 12 GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD 71
GHK V +V+F+ G+ L S S D+ V W D+R K S H + R + F+ D
Sbjct: 58 GHKDVVTSVQFSPLGNLLASASRDRTVRLWI-PDKRGKSSEFKAHTAPV---RSVDFSAD 113
Query: 72 RKII-TSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQH 130
+ + T+S D +++ ++ + + H R K + + G +I SC ED ++
Sbjct: 114 GQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPD-GR--LIVSCSEDKTIKI 170
Query: 131 FDLRSDSATRLF 142
+D + F
Sbjct: 171 WDTTNKQCVNNF 182
Score = 98 (39.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 12 GHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD 71
GHK + +V+F+ +G L + S D ++ W+ K + F Y+ GH D + + P +
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYV-GHKDVVTSVQFSPLGN- 73
Query: 72 RKIITSSADGQVRL 85
+ ++S D VRL
Sbjct: 74 -LLASASRDRTVRL 86
Score = 68 (29.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 267 VYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPH 326
+YS +R++ V+ F P+ ++S S+ + IW + V N ++ +
Sbjct: 137 LYSLYRHTHWVRCAKF-SPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFN 195
Query: 327 PHIPMFATCGIEKTVKLW 344
P+ A+ G + TVK+W
Sbjct: 196 PNGTCIASAGSDHTVKIW 213
Score = 63 (27.2 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 16/84 (19%), Positives = 38/84 (45%)
Query: 261 KREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVV 320
KR + + H + V+ V+F + +++ + S+ + +W + + + H V
Sbjct: 91 KRGKSSEFKAH--TAPVRSVDF-SADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWV 147
Query: 321 NQLEPHPHIPMFATCGIEKTVKLW 344
+ P + +C +KT+K+W
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKIW 171
Score = 61 (26.5 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 25/89 (28%), Positives = 41/89 (46%)
Query: 279 GVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG 336
GVN F P+ Y+++ S G L I G+L+ + G V + +F++ G
Sbjct: 230 GVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGG 289
Query: 337 IEKTVKLWAPMPTDFPPLPDNAEKIMKAN 365
+ V LW T+F L N + ++K N
Sbjct: 290 ADTQVLLWR---TNFDYL--NCKDMIKRN 313
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 109 (43.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 31/101 (30%), Positives = 52/101 (51%)
Query: 11 HGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTD 70
+GHK V A++++ G LVSGS D VI WD + + L GH D + T+++ +
Sbjct: 103 NGHKAAVTALQYDQLGGRLVSGSKDTDVIVWDVINESGLYR-LKGHKDAV--TQVLFLKE 159
Query: 71 DRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAV 111
++TS D V+ + D + K L H+ V+ +A+
Sbjct: 160 KNLLVTSGKDTLVKWWDL--DTQHCFKTLVGHRTEVWGMAL 198
Score = 108 (43.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 4 INLCG--KLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIF 61
IN G +L GHK V V F + LV+ D LV +WD D + F L GH ++
Sbjct: 136 INESGLYRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDL-DTQHCFKTLVGHRTEVW 194
Query: 62 QTRIMPFTDDRKIITSSADGQVRLGQI 88
++ ++++++IT +AD ++R+ I
Sbjct: 195 GMALV--SEEKRLITGTADSELRVWDI 219
Score = 67 (28.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 281 NFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKT 340
+ F P D V+ G+ G L ++ G L+ + V + P F T G +K
Sbjct: 455 SLFVPGDRQVIVGTKTGKLQLYDLASGTLMETLNAHDGAVWSIALSPDQRGFVTGGADKC 514
Query: 341 VKLW 344
VK W
Sbjct: 515 VKFW 518
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 37/125 (29%), Positives = 63/125 (50%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFT 69
L GHK +++++F+ G++L SGS D + WD + + F Y GH + R + F+
Sbjct: 101 LMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRY-KGHTQAV---RCLAFS 156
Query: 70 DDRKIITSSADGQ-VRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFV 128
D K + S++D V+L + G+M T+ H V + P Y++ S D V
Sbjct: 157 PDGKWLASASDDSTVKLWDLIA-GKMITE-FTSHTSAVNVVQFHPNE-YLLASGSADRTV 213
Query: 129 QHFDL 133
+ +DL
Sbjct: 214 KLWDL 218
Score = 101 (40.6 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 268 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP 327
Y GH +Q V+ + F P+ +++ S SD + +W GK++ VN ++ HP
Sbjct: 143 YKGH--TQAVRCLAF-SPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHP 199
Query: 328 HIPMFATCGIEKTVKLW 344
+ + A+ ++TVKLW
Sbjct: 200 NEYLLASGSADRTVKLW 216
Score = 65 (27.9 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 31/148 (20%), Positives = 61/148 (41%)
Query: 13 HKGCVNAVEFN-STGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQTRIMPFTDD 71
H V+++ S+G L +G +D V W + L+GH + + + +
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWA-VSKPNCIMSLTGHTSAVGCIQFN--SSE 75
Query: 72 RKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSCGEDGFVQHF 131
+++ S G +RL + E ++ +G H+ + L P Y+ S D ++ +
Sbjct: 76 ERVVAGSLSGSLRLWDL-EAAKILRTLMG-HKASISSLDFHPMGEYLA-SGSVDSNIKLW 132
Query: 132 DLRSDSA-------TRLFYCSSFSENSK 152
D+R T+ C +FS + K
Sbjct: 133 DVRRKGCVFRYKGHTQAVRCLAFSPDGK 160
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 104 (41.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 42/154 (27%), Positives = 64/154 (41%)
Query: 3 RINLCGKLHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLDNIFQ 62
R+ G+ HG VN F+ G L++ SDD V W K R + L+GH +
Sbjct: 18 RVRFYGQHHGE---VNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWR-LAGHRGPVKS 73
Query: 63 TRIMPFTDDRKIITSSADGQVRLGQIFEDGRMDTKRLGKHQGRVYKLAVEPGSPYIIYSC 122
P D R I +SS+D +RL + + L HQ V ++ P S + S
Sbjct: 74 CCFSP--DGRLIASSSSDHSIRLWDVARSKCLHV--LKGHQRSVETVSFSPDSKQLA-SG 128
Query: 123 GEDGFVQHFDLRSDSATRLF--YCSSFSENSKQP 154
G D ++++S L +C S + P
Sbjct: 129 GWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSP 162
Score = 59 (25.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 292 SGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 344
SGS + +WK L + G VN L P A+ G +TVK+W
Sbjct: 213 SGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVW 265
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 109 (43.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 58/214 (27%), Positives = 87/214 (40%)
Query: 25 TGDFLVSGSDDKLVIFWDWKDRREKFSYLSGHLD-NIFQTRIMPFTDDRKIITSSADGQV 83
+G F+ G D + + K R +S L + F DD +I+TSS D
Sbjct: 108 SGSFVACGGLDNICSIYSLKTREGNVR-VSRELPGHTGYLSCCRFLDDNQIVTSSGDMTC 166
Query: 84 RLGQIFEDGRMDTKRLGKHQGRVYKLAVEPG-SPYIIYSCGEDGFVQHFDLRSDSATRLF 142
L I E G+ T G H G V L++ P +I +C D + +D+R + F
Sbjct: 167 ALWDI-ETGQQCTAFTG-HTGDVMSLSLSPDFRTFISGAC--DASAKLWDIRDGMCKQTF 222
Query: 143 YCSSFSENSKQPMNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV 202
P + +NA+ P N FA G D R++DIR + S D +
Sbjct: 223 -----------PGHESDINAVAFFPSG-NAFATGSDDATCRLFDIRADQELAMYSHDNII 270
Query: 203 DTFCPRHLIGKNNIHITGLAYSNTSELLIS-YND 235
C G IT +A+S + LL + Y+D
Sbjct: 271 ---C-----G-----ITSVAFSKSGRLLFAGYDD 291
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 10 LHGHKGCVNAVEFNSTGDFLVSGSDDKLVIFWD 42
L GH + A+ + S LVS S D +I WD
Sbjct: 51 LRGHLAKIYAMHWASDSRNLVSASQDGKLIVWD 83
WARNING: HSPs involving 120 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 439 439 0.00089 118 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 370
No. of states in DFA: 616 (65 KB)
Total size of DFA: 295 KB (2154 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.30u 0.14s 38.44t Elapsed: 00:00:02
Total cpu time: 38.35u 0.14s 38.49t Elapsed: 00:00:02
Start: Sat May 11 09:52:26 2013 End: Sat May 11 09:52:28 2013
WARNINGS ISSUED: 2