Query 013645
Match_columns 439
No_of_seqs 158 out of 1713
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 05:57:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013645.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013645hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3098 Uncharacterized conser 100.0 1.2E-29 2.5E-34 248.4 34.0 392 22-430 3-438 (461)
2 PRK03545 putative arabinose tr 100.0 7.2E-27 1.6E-31 231.8 37.4 364 27-429 8-382 (390)
3 COG2814 AraJ Arabinose efflux 100.0 1.8E-26 3.9E-31 221.7 36.3 373 21-432 6-391 (394)
4 TIGR00897 2A0118 polyol permea 100.0 4.9E-25 1.1E-29 219.6 38.4 381 19-427 4-401 (402)
5 PRK09556 uhpT sugar phosphate 100.0 5.2E-26 1.1E-30 231.0 31.7 362 45-427 46-449 (467)
6 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.6E-25 3.5E-30 223.6 34.4 374 25-416 5-410 (412)
7 PRK11551 putative 3-hydroxyphe 100.0 3.5E-25 7.7E-30 220.7 36.6 370 28-427 12-396 (406)
8 PRK10406 alpha-ketoglutarate t 100.0 4E-25 8.6E-30 222.3 35.7 368 35-429 29-426 (432)
9 PRK11663 regulatory protein Uh 100.0 7.5E-25 1.6E-29 220.4 35.7 391 10-423 3-420 (434)
10 PRK15402 multidrug efflux syst 99.9 3.1E-24 6.6E-29 214.1 38.7 308 65-401 54-365 (406)
11 TIGR00890 2A0111 Oxalate/Forma 99.9 4.3E-25 9.4E-30 216.7 31.4 346 44-420 19-375 (377)
12 PLN00028 nitrate transmembrane 99.9 6.9E-25 1.5E-29 223.0 33.4 377 29-427 37-433 (476)
13 PRK09874 drug efflux system pr 99.9 4.8E-24 1E-28 212.5 38.3 370 26-431 12-402 (408)
14 PRK03699 putative transporter; 99.9 6.4E-24 1.4E-28 211.0 37.4 372 28-436 7-388 (394)
15 PRK10213 nepI ribonucleoside t 99.9 8.5E-24 1.8E-28 210.0 38.0 329 48-415 40-379 (394)
16 PRK10642 proline/glycine betai 99.9 2.2E-24 4.8E-29 220.3 34.5 346 28-392 16-391 (490)
17 PRK03633 putative MFS family t 99.9 4.8E-24 1E-28 210.9 35.0 356 24-422 2-367 (381)
18 PRK12382 putative transporter; 99.9 9.7E-24 2.1E-28 209.5 36.7 365 18-426 5-388 (392)
19 PRK09705 cynX putative cyanate 99.9 7E-24 1.5E-28 210.6 35.5 339 46-423 27-377 (393)
20 PRK12307 putative sialic acid 99.9 4.3E-24 9.3E-29 214.3 33.8 351 29-401 19-378 (426)
21 PRK10091 MFS transport protein 99.9 1.9E-23 4.2E-28 206.7 37.8 358 28-423 3-372 (382)
22 PRK09952 shikimate transporter 99.9 1.3E-23 2.8E-28 211.6 36.8 378 28-426 22-432 (438)
23 TIGR00710 efflux_Bcr_CflA drug 99.9 2.3E-23 5.1E-28 205.7 37.2 343 28-400 5-356 (385)
24 PRK11273 glpT sn-glycerol-3-ph 99.9 1E-23 2.2E-28 213.3 34.8 354 49-426 50-434 (452)
25 TIGR00903 2A0129 major facilit 99.9 2.2E-23 4.7E-28 204.7 35.4 322 65-423 32-361 (368)
26 TIGR00893 2A0114 d-galactonate 99.9 3.7E-24 8.1E-29 211.1 30.1 360 46-425 12-397 (399)
27 COG2271 UhpC Sugar phosphate p 99.9 3.5E-24 7.6E-29 203.5 27.4 370 33-426 34-433 (448)
28 PRK05122 major facilitator sup 99.9 2.2E-23 4.8E-28 207.3 34.6 360 24-428 11-390 (399)
29 PRK14995 methyl viologen resis 99.9 4.1E-23 8.9E-28 211.2 36.9 345 33-397 11-404 (495)
30 TIGR01299 synapt_SV2 synaptic 99.9 1.3E-23 2.8E-28 220.4 32.9 160 47-217 186-358 (742)
31 PRK10489 enterobactin exporter 99.9 1.9E-23 4.2E-28 209.1 32.2 326 65-423 58-396 (417)
32 TIGR00900 2A0121 H+ Antiporter 99.9 2.3E-23 5E-28 203.7 32.1 311 65-402 40-359 (365)
33 PRK11652 emrD multidrug resist 99.9 1.1E-22 2.4E-27 202.1 37.2 347 24-403 4-357 (394)
34 TIGR00891 2A0112 putative sial 99.9 3.1E-23 6.7E-28 206.0 32.8 357 25-402 9-386 (405)
35 PRK10133 L-fucose transporter; 99.9 6.4E-23 1.4E-27 206.2 34.8 337 22-386 20-388 (438)
36 PF07690 MFS_1: Major Facilita 99.9 5.3E-24 1.2E-28 207.3 26.2 338 36-397 4-352 (352)
37 PRK10504 putative transporter; 99.9 2E-22 4.4E-27 204.9 38.4 356 24-400 6-409 (471)
38 PRK10077 xylE D-xylose transpo 99.9 3.9E-23 8.4E-28 210.6 33.0 346 64-424 60-454 (479)
39 PRK11043 putative transporter; 99.9 2.6E-22 5.6E-27 199.8 37.9 336 31-399 9-350 (401)
40 PRK11195 lysophospholipid tran 99.9 2.8E-22 6.2E-27 199.0 37.8 338 28-400 3-350 (393)
41 PRK15403 multidrug efflux syst 99.9 6.1E-22 1.3E-26 197.9 40.4 308 63-400 55-367 (413)
42 PRK11646 multidrug resistance 99.9 2E-22 4.4E-27 200.5 36.3 333 30-401 13-354 (400)
43 PRK11102 bicyclomycin/multidru 99.9 1.6E-22 3.5E-27 199.4 34.4 307 65-400 32-343 (377)
44 TIGR00895 2A0115 benzoate tran 99.9 7E-23 1.5E-27 202.7 31.2 332 46-401 35-395 (398)
45 TIGR00711 efflux_EmrB drug res 99.9 1E-22 2.2E-27 207.6 33.3 350 31-400 5-404 (485)
46 TIGR00894 2A0114euk Na(+)-depe 99.9 3.8E-23 8.2E-28 210.0 29.2 345 65-428 82-451 (465)
47 TIGR00879 SP MFS transporter, 99.9 1.4E-23 3E-28 212.6 25.1 347 64-427 76-470 (481)
48 TIGR00892 2A0113 monocarboxyla 99.9 2.7E-22 5.8E-27 202.9 33.4 368 30-421 18-415 (455)
49 TIGR00886 2A0108 nitrite extru 99.9 1E-22 2.3E-27 199.8 29.6 348 29-392 2-365 (366)
50 TIGR00712 glpT glycerol-3-phos 99.9 2.2E-22 4.7E-27 202.8 32.2 345 65-430 67-436 (438)
51 PRK10054 putative transporter; 99.9 5.1E-22 1.1E-26 197.3 34.3 354 25-415 4-372 (395)
52 PRK15075 citrate-proton sympor 99.9 3.7E-22 8E-27 200.9 33.2 343 30-397 17-385 (434)
53 KOG3097 Predicted membrane pro 99.9 2.4E-24 5.1E-29 196.6 15.4 348 5-367 3-389 (390)
54 PRK15034 nitrate/nitrite trans 99.9 1.3E-21 2.8E-26 194.5 35.5 320 26-376 32-376 (462)
55 KOG2533 Permease of the major 99.9 5.5E-23 1.2E-27 206.0 24.5 239 62-311 84-336 (495)
56 PRK10473 multidrug efflux syst 99.9 3.4E-21 7.3E-26 191.2 36.5 320 49-405 24-352 (392)
57 TIGR00899 2A0120 sugar efflux 99.9 2.9E-21 6.2E-26 190.1 34.1 351 38-425 7-372 (375)
58 PRK03893 putative sialic acid 99.9 2.7E-21 5.9E-26 197.9 35.0 368 25-414 17-440 (496)
59 TIGR00881 2A0104 phosphoglycer 99.9 2.1E-22 4.6E-27 197.7 25.5 342 39-401 6-367 (379)
60 PRK11010 ampG muropeptide tran 99.9 1.4E-20 3.1E-25 191.9 39.6 328 74-429 60-405 (491)
61 TIGR00883 2A0106 metabolite-pr 99.9 8.6E-22 1.9E-26 194.5 28.0 305 73-401 49-370 (394)
62 TIGR00887 2A0109 phosphate:H+ 99.9 2.2E-21 4.7E-26 198.9 31.5 345 65-424 62-486 (502)
63 PRK08633 2-acyl-glycerophospho 99.9 1.3E-20 2.7E-25 211.8 39.3 315 65-400 53-378 (1146)
64 PRK06814 acylglycerophosphoeth 99.9 1.4E-20 3E-25 211.2 39.2 310 65-399 58-389 (1140)
65 cd06174 MFS The Major Facilita 99.9 2.8E-21 6E-26 187.5 29.0 335 33-424 4-349 (352)
66 TIGR00898 2A0119 cation transp 99.9 1.5E-21 3.3E-26 200.3 27.8 334 64-425 132-493 (505)
67 PRK09528 lacY galactoside perm 99.9 5.3E-21 1.2E-25 191.7 31.0 377 27-430 9-406 (420)
68 KOG1330 Sugar transporter/spin 99.9 5.2E-23 1.1E-27 197.3 14.8 292 5-312 9-311 (493)
69 TIGR00902 2A0127 phenyl propri 99.9 3.2E-20 6.9E-25 183.7 35.0 353 29-420 5-372 (382)
70 TIGR00896 CynX cyanate transpo 99.9 1.7E-20 3.6E-25 183.7 29.8 318 47-400 19-342 (355)
71 TIGR00889 2A0110 nucleoside tr 99.9 1E-19 2.3E-24 182.0 35.5 374 31-430 5-405 (418)
72 PRK11128 putative 3-phenylprop 99.9 1E-19 2.2E-24 180.1 35.0 331 36-402 12-351 (382)
73 TIGR00885 fucP L-fucose:H+ sym 99.9 1.4E-19 3.1E-24 180.4 35.9 321 29-380 4-356 (410)
74 PRK15011 sugar efflux transpor 99.9 3.9E-19 8.5E-24 176.6 36.8 366 20-426 7-390 (393)
75 KOG2532 Permease of the major 99.9 4.5E-21 9.7E-26 191.8 22.6 344 65-429 79-449 (466)
76 COG2223 NarK Nitrate/nitrite t 99.9 1.4E-19 2.9E-24 172.6 28.7 379 22-430 8-404 (417)
77 PRK11902 ampG muropeptide tran 99.9 1.3E-18 2.8E-23 173.4 37.2 350 52-432 23-395 (402)
78 TIGR00882 2A0105 oligosacchari 99.9 6.8E-19 1.5E-23 175.0 34.1 366 28-423 2-391 (396)
79 PRK10207 dipeptide/tripeptide 99.9 1.1E-18 2.4E-23 177.4 35.8 399 24-438 10-487 (489)
80 TIGR00901 2A0125 AmpG-related 99.9 5.2E-19 1.1E-23 173.2 31.3 319 50-390 10-355 (356)
81 KOG0569 Permease of the major 99.9 1.1E-18 2.4E-23 173.0 31.4 316 64-395 65-419 (485)
82 KOG3764 Vesicular amine transp 99.8 6E-20 1.3E-24 172.8 19.5 226 61-313 104-335 (464)
83 KOG2504 Monocarboxylate transp 99.8 6.3E-19 1.4E-23 178.4 28.6 374 28-427 43-476 (509)
84 TIGR00806 rfc RFC reduced fola 99.8 1.2E-17 2.6E-22 163.6 36.0 316 46-389 44-398 (511)
85 PF05977 MFS_3: Transmembrane 99.8 7.9E-18 1.7E-22 171.2 36.3 325 69-425 55-392 (524)
86 TIGR00924 yjdL_sub1_fam amino 99.8 2.1E-17 4.5E-22 167.9 39.1 394 25-432 7-473 (475)
87 COG0738 FucP Fucose permease [ 99.8 3.2E-18 7E-23 162.2 29.3 323 26-379 11-358 (422)
88 PTZ00207 hypothetical protein; 99.8 5.9E-17 1.3E-21 165.6 31.4 333 71-430 73-555 (591)
89 TIGR00792 gph sugar (Glycoside 99.8 7.2E-17 1.6E-21 162.5 30.4 306 68-399 44-373 (437)
90 COG2807 CynX Cyanate permease 99.8 1.1E-15 2.4E-20 143.1 33.7 341 46-427 30-385 (395)
91 PF05978 UNC-93: Ion channel r 99.8 4.2E-18 9E-23 144.3 14.9 142 33-184 1-152 (156)
92 TIGR02718 sider_RhtX_FptX side 99.8 2.7E-15 5.9E-20 148.8 36.7 350 41-421 14-385 (390)
93 TIGR00805 oat sodium-independe 99.8 1.9E-17 4.1E-22 173.1 20.8 254 50-314 55-397 (633)
94 PRK09584 tppB putative tripept 99.8 6.5E-15 1.4E-19 150.6 37.9 391 27-433 20-485 (500)
95 KOG0254 Predicted transporter 99.8 5.8E-16 1.2E-20 159.1 28.0 140 64-218 94-234 (513)
96 KOG2615 Permease of the major 99.8 1.8E-16 4E-21 148.6 21.8 312 66-401 75-409 (451)
97 PF11700 ATG22: Vacuole efflux 99.7 1.7E-13 3.8E-18 138.1 37.5 361 65-432 76-473 (477)
98 KOG0255 Synaptic vesicle trans 99.7 9.6E-15 2.1E-19 150.6 28.8 315 59-400 118-462 (521)
99 PRK09669 putative symporter Ya 99.7 2.4E-14 5.2E-19 144.6 30.9 300 71-398 57-380 (444)
100 PF06609 TRI12: Fungal trichot 99.7 2.3E-14 4.9E-19 146.0 29.8 308 67-396 86-457 (599)
101 PF03825 Nuc_H_symport: Nucleo 99.7 3.6E-13 7.8E-18 133.2 34.9 343 32-400 6-358 (400)
102 TIGR01272 gluP glucose/galacto 99.7 5.2E-14 1.1E-18 135.0 25.7 261 109-399 8-283 (310)
103 TIGR00788 fbt folate/biopterin 99.7 3.1E-13 6.7E-18 137.1 32.8 336 49-400 47-407 (468)
104 PRK10429 melibiose:sodium symp 99.7 4.2E-13 9.1E-18 136.6 33.1 306 71-397 54-384 (473)
105 TIGR01301 GPH_sucrose GPH fami 99.6 1.1E-12 2.5E-17 131.6 31.8 388 28-428 4-472 (477)
106 PF00083 Sugar_tr: Sugar (and 99.6 6.1E-20 1.3E-24 185.6 -21.0 341 64-421 51-430 (451)
107 PF13347 MFS_2: MFS/sugar tran 99.6 6.3E-14 1.4E-18 140.9 21.6 297 71-396 49-374 (428)
108 PF01306 LacY_symp: LacY proto 99.6 6.8E-13 1.5E-17 129.5 27.8 374 25-430 4-403 (412)
109 PRK09848 glucuronide transport 99.6 2E-12 4.2E-17 130.8 32.0 295 68-397 53-379 (448)
110 KOG0252 Inorganic phosphate tr 99.6 4.2E-15 9.2E-20 142.7 10.0 107 65-181 90-204 (538)
111 PRK15462 dipeptide/tripeptide 99.6 2.1E-11 4.6E-16 123.0 37.1 355 26-396 7-430 (493)
112 KOG4686 Predicted sugar transp 99.6 8.7E-15 1.9E-19 132.0 10.5 349 45-428 61-444 (459)
113 KOG2563 Permease of the major 99.6 8.3E-13 1.8E-17 127.2 24.7 388 24-433 38-456 (480)
114 PRK11462 putative transporter; 99.6 9.2E-12 2E-16 126.2 33.1 273 71-375 57-348 (460)
115 PF03209 PUCC: PUCC protein; 99.5 6.1E-10 1.3E-14 107.3 33.5 325 72-427 27-398 (403)
116 COG3104 PTR2 Dipeptide/tripept 99.4 4.9E-10 1.1E-14 110.0 31.7 351 74-438 76-498 (498)
117 COG2270 Permeases of the major 99.4 1.4E-10 3.1E-15 111.3 26.4 334 71-429 70-431 (438)
118 KOG0253 Synaptic vesicle trans 99.4 3.9E-11 8.5E-16 112.5 20.3 136 65-218 119-255 (528)
119 COG2211 MelB Na+/melibiose sym 99.4 1.5E-09 3.2E-14 107.4 30.8 311 58-395 43-385 (467)
120 PF05631 DUF791: Protein of un 99.3 8.4E-09 1.8E-13 97.9 27.5 267 21-310 30-304 (354)
121 KOG2325 Predicted transporter/ 99.2 9.5E-10 2.1E-14 109.0 21.1 106 65-181 77-189 (488)
122 TIGR01299 synapt_SV2 synaptic 99.2 2.7E-10 5.8E-15 120.4 18.2 130 71-217 607-737 (742)
123 TIGR00889 2A0110 nucleoside tr 99.2 8.3E-10 1.8E-14 110.6 17.9 139 68-217 260-406 (418)
124 TIGR00880 2_A_01_02 Multidrug 99.2 9.4E-10 2E-14 91.5 14.8 124 71-210 10-134 (141)
125 PRK05122 major facilitator sup 99.2 1.8E-09 3.9E-14 107.4 19.0 135 66-216 256-391 (399)
126 KOG2816 Predicted transporter 99.1 2.2E-08 4.7E-13 100.4 25.3 298 73-399 76-385 (463)
127 PRK10054 putative transporter; 99.1 3.3E-09 7.2E-14 105.5 16.7 165 250-422 8-177 (395)
128 PRK15011 sugar efflux transpor 99.1 1E-08 2.2E-13 101.8 20.2 129 70-215 263-392 (393)
129 PRK11551 putative 3-hydroxyphe 99.1 8.2E-09 1.8E-13 102.9 18.9 133 66-213 262-395 (406)
130 PF03092 BT1: BT1 family; Int 99.1 4.8E-08 1E-12 98.1 24.2 307 75-396 40-370 (433)
131 PRK12382 putative transporter; 99.1 9.5E-09 2.1E-13 101.9 18.2 128 69-212 259-387 (392)
132 TIGR00900 2A0121 H+ Antiporter 99.0 7.9E-09 1.7E-13 100.8 15.5 143 279-425 29-177 (365)
133 PRK10642 proline/glycine betai 99.0 3E-08 6.5E-13 101.5 19.0 135 69-218 296-434 (490)
134 PRK09584 tppB putative tripept 99.0 2.9E-08 6.3E-13 101.7 18.8 181 245-432 16-206 (500)
135 TIGR00902 2A0127 phenyl propri 99.0 4.3E-08 9.3E-13 97.0 19.4 165 27-209 204-374 (382)
136 TIGR00710 efflux_Bcr_CflA drug 99.0 1.4E-08 3E-13 100.2 15.8 154 263-424 19-177 (385)
137 TIGR00924 yjdL_sub1_fam amino 99.0 1.5E-08 3.3E-13 103.1 16.3 153 270-430 31-195 (475)
138 PRK09874 drug efflux system pr 99.0 2E-08 4.3E-13 100.0 16.7 125 72-212 271-396 (408)
139 PF07690 MFS_1: Major Facilita 99.0 9E-09 2E-13 99.9 13.5 135 280-422 28-167 (352)
140 PRK03545 putative arabinose tr 99.0 2.2E-08 4.7E-13 99.4 16.3 144 272-423 32-180 (390)
141 TIGR00899 2A0120 sugar efflux 98.9 6.5E-08 1.4E-12 95.0 19.5 126 73-215 249-375 (375)
142 cd06174 MFS The Major Facilita 98.9 4.2E-08 9.2E-13 94.8 17.6 127 68-210 220-348 (352)
143 PRK10091 MFS transport protein 98.9 2.7E-08 6E-13 98.4 16.4 164 250-421 4-172 (382)
144 PRK10489 enterobactin exporter 98.9 4E-08 8.7E-13 98.4 17.3 176 245-424 13-194 (417)
145 TIGR00890 2A0111 Oxalate/Forma 98.9 2.7E-08 5.8E-13 97.4 15.5 123 66-204 247-372 (377)
146 PRK15462 dipeptide/tripeptide 98.9 5E-08 1.1E-12 98.7 17.3 146 280-432 41-194 (493)
147 PRK11663 regulatory protein Uh 98.9 6.1E-08 1.3E-12 97.7 18.0 141 272-420 46-191 (434)
148 PRK10207 dipeptide/tripeptide 98.9 5.6E-08 1.2E-12 99.2 17.2 144 281-431 47-198 (489)
149 PRK09528 lacY galactoside perm 98.9 8.8E-08 1.9E-12 96.0 17.9 132 68-215 271-405 (420)
150 PRK03699 putative transporter; 98.9 9.7E-08 2.1E-12 94.9 17.7 173 26-215 203-381 (394)
151 PRK10213 nepI ribonucleoside t 98.9 7.4E-08 1.6E-12 95.8 16.7 141 271-419 42-187 (394)
152 PRK09705 cynX putative cyanate 98.9 6.2E-08 1.3E-12 96.3 15.9 134 280-421 40-178 (393)
153 PRK10504 putative transporter; 98.9 5.4E-08 1.2E-12 99.0 15.6 167 250-424 11-182 (471)
154 KOG4332 Predicted sugar transp 98.9 4.5E-07 9.7E-12 82.0 19.1 328 74-430 87-434 (454)
155 TIGR00885 fucP L-fucose:H+ sym 98.8 9.9E-08 2.1E-12 95.4 16.7 145 251-401 5-151 (410)
156 PRK11646 multidrug resistance 98.8 8.4E-08 1.8E-12 95.6 16.0 136 279-422 41-180 (400)
157 KOG4686 Predicted sugar transp 98.8 1.4E-07 3.1E-12 85.9 15.6 177 25-217 261-446 (459)
158 PF01770 Folate_carrier: Reduc 98.8 1.6E-05 3.5E-10 77.8 30.9 294 72-389 54-385 (412)
159 TIGR00898 2A0119 cation transp 98.8 1.1E-07 2.3E-12 97.7 16.7 129 72-218 368-499 (505)
160 PRK10473 multidrug efflux syst 98.8 1.4E-07 3E-12 93.6 16.8 147 268-422 22-173 (392)
161 PF11700 ATG22: Vacuole efflux 98.8 3E-07 6.5E-12 93.1 19.3 176 25-215 278-469 (477)
162 PRK11102 bicyclomycin/multidru 98.8 7.2E-08 1.6E-12 95.0 14.5 146 270-423 12-162 (377)
163 PRK11195 lysophospholipid tran 98.8 9.3E-08 2E-12 95.1 15.3 143 249-402 3-146 (393)
164 PRK03633 putative MFS family t 98.8 7E-08 1.5E-12 95.4 14.3 147 249-403 6-153 (381)
165 PF03137 OATP: Organic Anion T 98.8 7.1E-10 1.5E-14 113.7 -0.5 252 51-312 26-370 (539)
166 TIGR00897 2A0118 polyol permea 98.8 2.9E-07 6.2E-12 91.8 18.0 169 28-214 222-401 (402)
167 TIGR02332 HpaX 4-hydroxyphenyl 98.8 9.7E-08 2.1E-12 95.5 14.7 134 280-421 39-183 (412)
168 PRK15403 multidrug efflux syst 98.8 1.9E-07 4.1E-12 93.4 16.5 136 280-423 47-187 (413)
169 TIGR00895 2A0115 benzoate tran 98.8 1.3E-07 2.8E-12 93.4 14.9 105 66-180 292-397 (398)
170 TIGR00891 2A0112 putative sial 98.8 1.9E-07 4.2E-12 92.5 16.0 132 279-418 42-180 (405)
171 TIGR00711 efflux_EmrB drug res 98.8 1.1E-07 2.5E-12 96.9 14.3 137 279-423 32-173 (485)
172 PRK11902 ampG muropeptide tran 98.8 2.5E-07 5.4E-12 92.2 16.4 160 257-423 7-178 (402)
173 PRK10133 L-fucose transporter; 98.8 4.5E-07 9.8E-12 91.5 18.3 140 255-400 32-173 (438)
174 PRK11128 putative 3-phenylprop 98.8 6.5E-07 1.4E-11 88.6 19.0 102 71-183 252-355 (382)
175 KOG3626 Organic anion transpor 98.7 1.6E-07 3.5E-12 97.2 14.6 192 111-312 237-457 (735)
176 PRK15402 multidrug efflux syst 98.7 2.4E-07 5.3E-12 92.3 15.8 145 271-423 35-184 (406)
177 TIGR00879 SP MFS transporter, 98.7 1.3E-07 2.7E-12 95.7 13.7 135 66-217 326-474 (481)
178 TIGR00712 glpT glycerol-3-phos 98.7 7.9E-07 1.7E-11 89.7 19.0 141 279-423 56-202 (438)
179 PF05977 MFS_3: Transmembrane 98.7 3.5E-07 7.6E-12 93.6 16.3 176 245-427 6-190 (524)
180 PRK09556 uhpT sugar phosphate 98.7 5.6E-07 1.2E-11 91.6 17.6 175 28-213 258-448 (467)
181 PRK11652 emrD multidrug resist 98.7 3.7E-07 8E-12 90.6 15.9 146 266-419 25-175 (394)
182 TIGR00882 2A0105 oligosacchari 98.7 1.3E-07 2.9E-12 93.9 12.6 175 248-424 1-180 (396)
183 TIGR00792 gph sugar (Glycoside 98.7 2.7E-07 5.9E-12 92.8 15.0 111 69-182 267-379 (437)
184 PRK14995 methyl viologen resis 98.7 4.5E-07 9.7E-12 93.0 16.7 158 260-425 17-180 (495)
185 PRK11043 putative transporter; 98.7 4.1E-07 8.9E-12 90.5 16.0 148 270-425 27-179 (401)
186 PF03825 Nuc_H_symport: Nucleo 98.7 1.2E-06 2.7E-11 86.9 19.1 130 77-217 261-399 (400)
187 PRK09952 shikimate transporter 98.7 8.4E-07 1.8E-11 89.5 18.2 131 72-216 299-435 (438)
188 COG2814 AraJ Arabinose efflux 98.7 9.3E-07 2E-11 86.0 17.0 167 254-428 18-189 (394)
189 TIGR00893 2A0114 d-galactonate 98.7 2.5E-07 5.4E-12 90.9 13.4 137 280-424 25-166 (399)
190 PRK11010 ampG muropeptide tran 98.7 1E-06 2.2E-11 90.2 18.2 174 245-425 8-193 (491)
191 TIGR00883 2A0106 metabolite-pr 98.7 2.9E-07 6.2E-12 90.7 13.3 108 67-184 263-376 (394)
192 PRK11273 glpT sn-glycerol-3-ph 98.7 1.9E-06 4.1E-11 87.3 19.2 137 279-421 58-202 (452)
193 TIGR00886 2A0108 nitrite extru 98.6 5.8E-07 1.3E-11 88.0 14.8 114 279-400 32-146 (366)
194 COG2270 Permeases of the major 98.6 6.8E-07 1.5E-11 86.4 14.6 176 26-216 250-431 (438)
195 TIGR00887 2A0109 phosphate:H+ 98.6 2.9E-07 6.2E-12 94.6 13.2 134 74-218 350-493 (502)
196 TIGR00892 2A0113 monocarboxyla 98.6 2.3E-07 5.1E-12 94.0 11.8 145 28-182 241-394 (455)
197 TIGR01301 GPH_sucrose GPH fami 98.6 6.9E-07 1.5E-11 90.1 14.9 166 259-426 12-217 (477)
198 PRK12307 putative sialic acid 98.6 7.3E-07 1.6E-11 89.4 15.1 125 280-412 49-178 (426)
199 TIGR00881 2A0104 phosphoglycer 98.6 1.5E-07 3.1E-12 92.3 9.5 136 280-423 26-167 (379)
200 PLN00028 nitrate transmembrane 98.6 1.5E-06 3.3E-11 88.7 16.3 139 279-426 66-218 (476)
201 PRK03893 putative sialic acid 98.6 1.4E-06 2.9E-11 89.3 15.4 126 279-412 50-180 (496)
202 TIGR00901 2A0125 AmpG-related 98.5 8.2E-07 1.8E-11 86.8 12.3 127 30-166 211-354 (356)
203 TIGR00903 2A0129 major facilit 98.5 1.8E-06 3.9E-11 85.0 14.5 137 280-425 22-163 (368)
204 PRK09848 glucuronide transport 98.5 1.6E-06 3.4E-11 87.8 14.5 154 26-182 226-387 (448)
205 TIGR00896 CynX cyanate transpo 98.5 3.8E-06 8.2E-11 82.1 16.4 147 28-184 197-349 (355)
206 PF13347 MFS_2: MFS/sugar tran 98.5 2.7E-06 6E-11 85.5 15.7 151 28-182 225-383 (428)
207 TIGR00880 2_A_01_02 Multidrug 98.5 9.5E-07 2.1E-11 73.2 10.4 125 292-424 6-135 (141)
208 KOG1330 Sugar transporter/spin 98.5 7.1E-08 1.5E-12 93.9 3.7 136 280-423 64-205 (493)
209 TIGR00769 AAA ADP/ATP carrier 98.5 0.00059 1.3E-08 68.8 31.6 279 24-314 3-333 (472)
210 PRK15034 nitrate/nitrite trans 98.5 7E-06 1.5E-10 82.4 17.4 110 280-396 66-179 (462)
211 COG2271 UhpC Sugar phosphate p 98.5 2.8E-06 6.1E-11 82.1 13.9 145 280-432 60-211 (448)
212 PRK08633 2-acyl-glycerophospho 98.5 2.9E-06 6.2E-11 96.0 16.5 113 285-403 48-162 (1146)
213 PRK10077 xylE D-xylose transpo 98.5 2.1E-06 4.6E-11 87.4 13.7 140 281-423 52-211 (479)
214 TIGR00805 oat sodium-independe 98.5 1.4E-06 2.9E-11 91.8 12.4 120 279-401 63-229 (633)
215 PF01306 LacY_symp: LacY proto 98.4 1.4E-05 3E-10 78.6 18.0 130 71-216 271-403 (412)
216 PRK15075 citrate-proton sympor 98.4 8.8E-06 1.9E-10 82.0 17.2 103 71-183 286-394 (434)
217 TIGR02718 sider_RhtX_FptX side 98.4 2E-05 4.2E-10 78.2 19.0 119 73-206 258-383 (390)
218 PRK10406 alpha-ketoglutarate t 98.4 1.2E-05 2.6E-10 81.0 17.3 132 69-216 289-426 (432)
219 TIGR00894 2A0114euk Na(+)-depe 98.4 2.7E-06 5.8E-11 86.5 11.1 138 281-424 73-216 (465)
220 PRK09669 putative symporter Ya 98.3 2.1E-05 4.6E-10 79.5 16.6 106 74-182 279-387 (444)
221 KOG3764 Vesicular amine transp 98.3 1.6E-06 3.4E-11 83.0 7.6 143 283-433 105-253 (464)
222 PRK06814 acylglycerophosphoeth 98.3 1.4E-05 3E-10 90.5 16.7 113 285-402 53-166 (1140)
223 COG3104 PTR2 Dipeptide/tripept 98.3 5.3E-06 1.2E-10 82.0 11.5 143 285-433 62-212 (498)
224 TIGR01272 gluP glucose/galacto 98.3 6.7E-05 1.5E-09 72.0 18.3 107 64-183 183-290 (310)
225 PF06609 TRI12: Fungal trichot 98.3 2.1E-05 4.5E-10 81.0 15.1 141 279-428 72-218 (599)
226 KOG0253 Synaptic vesicle trans 98.2 1.6E-05 3.4E-10 75.5 12.2 120 74-215 396-520 (528)
227 KOG3574 Acetyl-CoA transporter 98.2 0.0013 2.8E-08 62.9 24.9 348 25-392 28-417 (510)
228 PTZ00207 hypothetical protein; 98.2 4.8E-05 1E-09 78.7 16.4 139 280-423 58-201 (591)
229 COG2211 MelB Na+/melibiose sym 98.2 0.00015 3.3E-09 72.2 19.2 153 26-182 234-395 (467)
230 PRK10429 melibiose:sodium symp 98.2 3.1E-05 6.8E-10 78.9 14.1 109 71-182 278-392 (473)
231 PF06813 Nodulin-like: Nodulin 98.2 0.00015 3.3E-09 66.7 16.8 97 75-182 52-156 (250)
232 PRK11462 putative transporter; 98.1 0.00013 2.7E-09 74.2 17.4 109 71-182 275-386 (460)
233 KOG3762 Predicted transporter 98.1 6.9E-05 1.5E-09 74.6 13.8 192 238-437 360-557 (618)
234 COG2223 NarK Nitrate/nitrite t 98.1 0.0001 2.2E-09 71.5 14.3 145 279-432 44-198 (417)
235 KOG2615 Permease of the major 98.0 2.6E-05 5.6E-10 74.4 9.1 111 285-404 69-180 (451)
236 KOG0254 Predicted transporter 98.0 5.9E-05 1.3E-09 77.7 12.5 129 286-422 91-225 (513)
237 KOG2504 Monocarboxylate transp 98.0 9.4E-05 2E-09 75.6 13.3 172 28-214 298-476 (509)
238 TIGR00806 rfc RFC reduced fola 98.0 8.3E-05 1.8E-09 74.0 12.4 140 279-427 56-203 (511)
239 TIGR00788 fbt folate/biopterin 98.0 0.00014 3.1E-09 74.0 14.0 104 71-184 300-414 (468)
240 COG0738 FucP Fucose permease [ 97.9 0.00017 3.7E-09 69.6 13.2 140 255-400 19-160 (422)
241 KOG3762 Predicted transporter 97.9 3.9E-05 8.5E-10 76.3 8.8 120 75-210 422-543 (618)
242 PF03219 TLC: TLC ATP/ADP tran 97.9 0.038 8.1E-07 56.2 30.7 288 24-315 20-350 (491)
243 KOG2325 Predicted transporter/ 97.9 0.00019 4.1E-09 71.8 12.6 147 282-433 69-235 (488)
244 PF06963 FPN1: Ferroportin1 (F 97.8 0.042 9.2E-07 54.9 31.1 126 274-400 283-412 (432)
245 COG0477 ProP Permeases of the 97.8 0.00044 9.6E-09 64.5 13.1 117 64-193 44-165 (338)
246 KOG0255 Synaptic vesicle trans 97.7 0.00037 8.1E-09 72.0 12.8 132 285-425 119-253 (521)
247 PF06813 Nodulin-like: Nodulin 97.7 0.00085 1.9E-08 61.8 13.3 127 267-395 19-146 (250)
248 KOG0569 Permease of the major 97.7 0.00067 1.5E-08 68.3 13.3 107 288-399 64-171 (485)
249 KOG2532 Permease of the major 97.6 0.00023 4.9E-09 72.0 9.5 142 281-428 70-217 (466)
250 KOG0252 Inorganic phosphate tr 97.6 7.4E-05 1.6E-09 73.1 5.3 180 28-218 304-502 (538)
251 COG2807 CynX Cyanate permease 97.5 0.0034 7.4E-08 60.0 14.7 142 280-430 43-189 (395)
252 TIGR00926 2A1704 Peptide:H+ sy 97.4 0.017 3.7E-07 61.0 20.5 130 73-210 37-178 (654)
253 KOG3810 Micronutrient transpor 97.4 0.018 4E-07 54.7 17.5 288 77-389 60-371 (433)
254 PF02487 CLN3: CLN3 protein; 97.3 0.096 2.1E-06 51.6 22.4 55 346-400 336-391 (402)
255 PF00083 Sugar_tr: Sugar (and 97.2 3.2E-06 7E-11 85.5 -10.1 131 72-219 299-442 (451)
256 PF03209 PUCC: PUCC protein; 97.1 0.011 2.4E-07 57.7 13.9 114 58-181 239-361 (403)
257 PF05631 DUF791: Protein of un 97.0 0.061 1.3E-06 51.7 17.2 88 278-374 63-150 (354)
258 PF12832 MFS_1_like: MFS_1 lik 96.8 0.0041 8.8E-08 46.1 5.8 49 270-318 21-69 (77)
259 KOG2533 Permease of the major 96.7 0.018 4E-07 58.6 12.3 131 284-422 81-222 (495)
260 TIGR00926 2A1704 Peptide:H+ sy 96.7 0.02 4.4E-07 60.4 12.7 137 291-430 30-185 (654)
261 KOG0637 Sucrose transporter an 96.7 0.15 3.3E-06 50.4 17.4 98 73-179 81-201 (498)
262 KOG0637 Sucrose transporter an 96.4 0.0048 1E-07 60.7 5.5 143 260-404 41-203 (498)
263 PF00854 PTR2: POT family; In 96.2 0.024 5.2E-07 55.8 9.1 88 346-433 34-129 (372)
264 PF12832 MFS_1_like: MFS_1 lik 95.6 0.11 2.4E-06 38.4 8.4 68 31-98 3-74 (77)
265 TIGR00939 2a57 Equilibrative N 95.6 2.9 6.3E-05 42.1 27.6 107 288-396 311-424 (437)
266 TIGR00769 AAA ADP/ATP carrier 95.6 1.2 2.6E-05 45.2 18.3 81 347-430 133-231 (472)
267 PF02487 CLN3: CLN3 protein; 95.6 0.25 5.5E-06 48.7 13.1 86 86-181 304-395 (402)
268 PF07672 MFS_Mycoplasma: Mycop 95.2 0.13 2.7E-06 47.3 8.9 76 289-366 146-225 (267)
269 PF13000 Acatn: Acetyl-coenzym 95.2 4.1 9E-05 41.2 24.9 156 235-392 264-453 (544)
270 KOG3626 Organic anion transpor 94.8 0.14 2.9E-06 54.1 9.0 151 280-433 128-349 (735)
271 KOG2816 Predicted transporter 94.5 0.52 1.1E-05 47.7 12.3 98 72-180 290-389 (463)
272 PF00854 PTR2: POT family; In 94.5 0.26 5.7E-06 48.5 10.0 108 90-210 2-119 (372)
273 COG0477 ProP Permeases of the 94.2 1.6 3.5E-05 40.1 14.3 110 285-400 40-152 (338)
274 PF03137 OATP: Organic Anion T 93.9 0.015 3.2E-07 60.1 -0.3 151 280-433 34-256 (539)
275 KOG2563 Permease of the major 93.4 1.8 3.9E-05 43.1 13.0 116 285-402 80-198 (480)
276 COG3202 ATP/ADP translocase [E 93.4 9.9 0.00022 38.4 31.6 156 24-183 23-210 (509)
277 PF05978 UNC-93: Ion channel r 93.2 2.1 4.5E-05 36.4 11.7 95 294-397 47-146 (156)
278 PF03092 BT1: BT1 family; Int 92.5 2.6 5.6E-05 42.4 13.3 131 78-218 274-417 (433)
279 KOG3098 Uncharacterized conser 92.1 7.8 0.00017 39.1 15.9 81 82-173 305-404 (461)
280 TIGR00939 2a57 Equilibrative N 92.0 2.9 6.2E-05 42.1 12.9 61 110-180 371-431 (437)
281 PRK03612 spermidine synthase; 91.9 6 0.00013 40.9 15.3 26 285-310 51-76 (521)
282 KOG1479 Nucleoside transporter 91.8 14 0.00031 36.4 22.2 103 290-396 288-395 (406)
283 PRK03612 spermidine synthase; 91.6 12 0.00027 38.6 17.3 29 154-182 142-170 (521)
284 PF06779 DUF1228: Protein of u 89.9 1.1 2.3E-05 33.8 5.7 75 262-339 5-79 (85)
285 KOG1237 H+/oligopeptide sympor 89.3 6 0.00013 41.3 12.7 151 48-210 58-241 (571)
286 PF06963 FPN1: Ferroportin1 (F 86.8 27 0.00059 35.1 15.1 141 29-176 259-411 (432)
287 PF03219 TLC: TLC ATP/ADP tran 83.0 59 0.0013 33.3 18.7 145 248-397 23-197 (491)
288 PF06779 DUF1228: Protein of u 82.5 9.4 0.0002 28.7 7.3 60 46-105 10-73 (85)
289 PF01770 Folate_carrier: Reduc 76.1 39 0.00085 33.6 11.5 115 303-426 60-181 (412)
290 KOG3574 Acetyl-CoA transporter 75.8 40 0.00087 33.3 11.0 144 249-397 31-186 (510)
291 KOG4332 Predicted sugar transp 75.5 29 0.00063 32.4 9.6 87 279-374 67-154 (454)
292 PF01733 Nucleoside_tran: Nucl 67.9 2 4.4E-05 41.1 0.5 105 289-395 187-299 (309)
293 KOG1479 Nucleoside transporter 65.6 1.2E+02 0.0025 30.2 12.1 32 345-376 117-148 (406)
294 COG3202 ATP/ADP translocase [E 63.9 1.8E+02 0.0038 29.8 18.2 175 249-428 27-246 (509)
295 PF11947 DUF3464: Protein of u 57.2 38 0.00083 28.5 6.1 76 81-169 56-142 (153)
296 KOG1237 H+/oligopeptide sympor 54.7 56 0.0012 34.3 8.3 63 110-182 457-519 (571)
297 PF07672 MFS_Mycoplasma: Mycop 52.9 1.3E+02 0.0027 28.1 9.2 47 110-164 203-249 (267)
298 PF01733 Nucleoside_tran: Nucl 43.0 8.9 0.00019 36.6 0.3 58 112-179 249-306 (309)
299 PF02990 EMP70: Endomembrane p 33.9 5.5E+02 0.012 26.5 12.9 25 289-313 302-326 (521)
300 COG4769 Predicted membrane pro 30.3 3.5E+02 0.0076 23.2 8.3 46 73-123 87-132 (181)
301 PF10329 DUF2417: Region of un 29.5 4.4E+02 0.0095 24.0 10.1 10 8-17 1-10 (232)
302 CHL00031 psbT photosystem II p 27.5 1.3E+02 0.0029 18.0 3.3 21 200-220 9-30 (33)
303 KOG4830 Predicted sugar transp 23.2 6.4E+02 0.014 23.8 9.8 90 346-435 294-404 (412)
304 KOG4112 Signal peptidase subun 23.1 2.2E+02 0.0047 21.7 4.7 52 381-432 24-76 (101)
305 COG5336 Uncharacterized protei 21.7 4.1E+02 0.0089 21.0 6.1 28 390-417 57-85 (116)
306 PF09819 ABC_cobalt: ABC-type 21.6 4.5E+02 0.0098 21.5 9.5 67 60-129 35-101 (129)
307 PF05393 Hum_adeno_E3A: Human 21.3 1.8E+02 0.004 21.8 3.9 21 417-437 44-64 (94)
308 PF07857 DUF1632: CEO family ( 20.7 4.7E+02 0.01 24.2 7.5 17 200-216 122-138 (254)
309 PF12273 RCR: Chitin synthesis 20.2 58 0.0013 26.6 1.4 20 193-212 2-21 (130)
No 1
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.98 E-value=1.2e-29 Score=248.43 Aligned_cols=392 Identities=26% Similarity=0.406 Sum_probs=289.1
Q ss_pred CccccchhHHHHHHHHHHHHHHHhhhhhhHhhhc----c------CCCCchHHHHHHHHHHHhhhhhHHHHHHHhchhHH
Q 013645 22 TPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVN----T------EGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNA 91 (439)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~----~------~~~~g~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~ 91 (439)
++++.++++..++++.++.+.++.+...+++.+- + +.+-|..+++++|..++++++++|.+.|+.|+|+.
T Consensus 3 ~~~~~~~~v~~lg~g~~~~f~~~~s~~fi~esvi~sv~~~~~g~i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~ 82 (461)
T KOG3098|consen 3 PRRFELLNVLMLGFGFLFLFTAYDSQGFIAESVIHSVHERGPGGISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWA 82 (461)
T ss_pred cccchhheeeehhhhHHHHhHhhhhhHHHHHHHHHHHHhcCCCCcCCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHH
Confidence 4556789999999999999999998877766542 2 14567778999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHhhhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhh
Q 013645 92 LILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQF 171 (439)
Q Consensus 92 l~~g~~~~~~~~~~~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~ 171 (439)
|++|..+|..+.++++.+|-+.++++.++.|+|.+..|.+++.|+++++ .++++.++.++.|+....+..
T Consensus 83 lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~ylt~~s----------t~~tie~Nisi~Wai~~~~li 152 (461)
T KOG3098|consen 83 LVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGGYLTSNS----------TRETIERNISIFWAIGQSSLI 152 (461)
T ss_pred HHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccceehhhcC----------ChhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888889999999999999999999999998 678999999999999999999
Q ss_pred hhhHHHHHhhcCCC-CC--CCCcchHH----------HHHHHHHH---HHHHHHHHhccCCCccccccccccchhhhhhH
Q 013645 172 VGNLITLAVLKDDK-GG--STSGTTLL----------FIVFLGVI---TLGTILMCFLRKEEDKGEKETADASVNFYSYL 235 (439)
Q Consensus 172 iG~~i~~~l~~~~~-~~--~~~w~~~~----------~~~~~~~~---~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 235 (439)
+|+.+-..+.++.+ ++ ..+.++.. ...+.++. .++++...+.|.++...+.+. . +..+
T Consensus 153 ~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~~~~~~~~-----~-~~~~ 226 (461)
T KOG3098|consen 153 IGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKDVVNCKSS-----S-ETSF 226 (461)
T ss_pred hhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccchhhhhhh-----c-cccH
Confidence 99887666554332 10 11222111 11111111 122222223333222211111 1 1355
Q ss_pred HHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhh-cccccc---cchHHHHHHHHHHHHHHHHhhhhhhcCC
Q 013645 236 VSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGV---SGVGGAMAVYGAFDAICSLAAGRLTTGL 311 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~---~~~g~~~~~~~i~~~ig~~~~G~l~d~~ 311 (439)
++.++...+++++|+++.+.|.+++.|+..+|+.+.||..+. ++..+. .-.+..+...+++++++....+.++||.
T Consensus 227 ~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~ri 306 (461)
T KOG3098|consen 227 SELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRI 306 (461)
T ss_pred HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhh
Confidence 677778889999999999999999999999999999998752 112222 2245556678888888888888887665
Q ss_pred ---CCcceehhhHHHHHHHHHHHHHhhccCCCC---------cc--chHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCC
Q 013645 312 ---PSITFIVSGGAIAQVVVFLWILINYSVTSG---------VL--GTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD 377 (439)
Q Consensus 312 ---~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~--~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~ 377 (439)
|++. .+..+.+++.+...++.+..+.+.. ++ ...+..++.++.|++|++++++.+.++++++|++
T Consensus 307 r~fg~~~-~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~ 385 (461)
T KOG3098|consen 307 RGFGRKP-TVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDD 385 (461)
T ss_pred hhcccCc-chhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCc
Confidence 4444 4556666665544333333332221 00 1346788999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 378 TEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQV 430 (439)
Q Consensus 378 ~~~a~s~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
+.++++++++.|+.+.+++.+..+............+.+.++....+...++.
T Consensus 386 ~~~~fsi~kfyq~~~s~v~~f~~~~~~l~~~~l~~~i~~~i~~~~~~~~~~~~ 438 (461)
T KOG3098|consen 386 RAQAFSLFKFYQSVASCVAFFFSPYLLLYIYTLGLPIFCVIATTIFFIVAERT 438 (461)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999998888887766666666666666666666555544
No 2
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=7.2e-27 Score=231.83 Aligned_cols=364 Identities=15% Similarity=0.055 Sum_probs=240.5
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHH
Q 013645 27 TRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (439)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~ 102 (439)
+..++.+.++.++..........+.|.+.++.+.+... .+.....+++++++.|++.||+|||+++..+.+.+++.
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 87 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIAS 87 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 33455555555443333223334556666665555433 33445566788899999999999999999999887776
Q ss_pred HHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhh
Q 013645 103 VAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (439)
Q Consensus 103 ~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~ 181 (439)
.+. ...+|++.+++.|+++|++.+..++...++++++. |++||++++|++....++|.++|++++..+.
T Consensus 88 ~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~----------~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~ 157 (390)
T PRK03545 88 HVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVA----------PAGKKAQALSLLATGTALAMVLGLPLGRVIG 157 (390)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------ChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 555 36789999999999999999998888888888886 7899999999999999999999999988775
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHH-HHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHH
Q 013645 182 KDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAY 260 (439)
Q Consensus 182 ~~~~~~~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 260 (439)
.+ .+||+. |.+.+++.++..+. ..++||++++ ++ .+ .++..+.+|+|+++......+.
T Consensus 158 ~~-----~gw~~~-f~~~~~~~~l~~~~~~~~~~~~~~~--~~---------~~----~~~~~~~~~~~~~~~~~~~~~~ 216 (390)
T PRK03545 158 QY-----LGWRTT-FLAIGGGALITLLLLIKLLPLLPSE--HS---------GS----LKSLPLLFRRPALVSLYLLTVV 216 (390)
T ss_pred HH-----hcHHHH-HHHHHHHHHHHHHHHHHhCCCCCCC--Cc---------ch----HHHHHHHHhCcHHHHHHHHHHH
Confidence 43 368875 44445545444333 2334543221 10 01 1123457788887654433222
Q ss_pred hhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCC
Q 013645 261 SGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVT 339 (439)
Q Consensus 261 ~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~ 339 (439)
.........++.++.+.+ .+.+.+..+......+++.++++++.|+++||.++|. + ..+..+...+... +....++
T Consensus 217 ~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-~-~~~~~~~~~~~~~-l~~~~~~ 293 (390)
T PRK03545 217 VVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF-L-LIAIALLLVCLLL-LLPAANS 293 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH-H-HHHHHHHHHHHHH-HHHHhch
Confidence 111111111233333322 3455566788888889999999999999999998764 3 3343333333221 2222222
Q ss_pred CCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHH
Q 013645 340 SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVG 415 (439)
Q Consensus 340 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~ 415 (439)
.....++.+++|++.....+...+.+.+..|++++.+.|.++....+|..+++.+.+ ..++...++..+++
T Consensus 294 -----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~ 368 (390)
T PRK03545 294 -----EWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAAL 368 (390)
T ss_pred -----HHHHHHHHHHHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHH
Confidence 245667888899988777777888888988877766777777766666666655543 45778888888888
Q ss_pred HHHHHHHHHHHHHH
Q 013645 416 ICVALVGILFLTIQ 429 (439)
Q Consensus 416 ~~~~~~~~~~~~~~ 429 (439)
.+++++..++..++
T Consensus 369 ~~~~~~~~~~~~~~ 382 (390)
T PRK03545 369 ALAALVWSILIFRR 382 (390)
T ss_pred HHHHHHHHHHHccc
Confidence 88888877665543
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.8e-26 Score=221.73 Aligned_cols=373 Identities=13% Similarity=0.062 Sum_probs=257.9
Q ss_pred cCccccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHh
Q 013645 21 LTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGT 96 (439)
Q Consensus 21 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~ 96 (439)
+.+++.++.++.++++.+.+-+.=.....+.|++.+|.+..... .+..-..+++++++...+.||+.||+++....
T Consensus 6 ~~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l 85 (394)
T COG2814 6 TARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLL 85 (394)
T ss_pred cccccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHH
Confidence 35667888888888888888766555567777777766555432 34444467788999999999999999999999
Q ss_pred HHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhH
Q 013645 97 TGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNL 175 (439)
Q Consensus 97 ~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~ 175 (439)
.++.+..+. ..+||+..++++|++.|+..|..|+...++.++.. ||+||++++++...+.+++.++|.+
T Consensus 86 ~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lv----------pp~~~~~Aiaiv~~G~tlA~v~GvP 155 (394)
T COG2814 86 ALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLV----------PPGKRGRALALVFTGLTLATVLGVP 155 (394)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CccchhhHHHHHHHHHHHHHHHhcc
Confidence 887776554 57899999999999999999999999999999887 9999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHH-HHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHH
Q 013645 176 ITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLI 254 (439)
Q Consensus 176 i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (439)
++.++.+. .|||..++. ..+++++..+. ...+| |++.+++ ++.+ .++..+.+|+|+.+..
T Consensus 156 LGt~ig~~-----~GWR~~F~~-ia~l~ll~~~~~~~~lP-~~~~~~~--------~~~~----~~~~~~~l~~p~v~~~ 216 (394)
T COG2814 156 LGTFLGQL-----FGWRATFLA-IAVLALLALLLLWKLLP-PSEISGS--------LPGP----LRTLLRLLRRPGVLLG 216 (394)
T ss_pred HHHHHHHH-----hhHHHHHHH-HHHHHHHHHHHHHHhCC-CccCCCC--------CCcc----hhHHHHHhcCchHHHH
Confidence 99999764 479986444 45555554443 35566 2211111 0011 1223467899998876
Q ss_pred HHHH--HHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHH
Q 013645 255 IPLF--AYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW 331 (439)
Q Consensus 255 ~~~~--~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~ 331 (439)
.... .+.|....| ++..+.+.+ .+++.+.++++..++|++..+|+.+.||+.|| +.|+.+ .....+.++.+.
T Consensus 217 l~~t~l~~~g~F~~f--tYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l-~~~~~l~a~~~l- 291 (394)
T COG2814 217 LLATFLFMTGHFALY--TYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRAL-IAALLLLALALL- 291 (394)
T ss_pred HHHHHHHHcchhhhH--HhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHH-HHHHHHHHHHHH-
Confidence 5432 233332222 233333322 35667788999999999999999999999999 655533 344344444432
Q ss_pred HHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhH----HHHHHHHHHHHHHHHHHhhhhhHHH
Q 013645 332 ILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAF----AQLKVWQCASIAVVFFIGPYISLQA 407 (439)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~----s~~~~~~~~g~~i~~~i~~~~~~~~ 407 (439)
.+.+.++. .....+..++||+.........+...++..||+++.+. +.+|....+|+.+|-.+-...++..
T Consensus 292 -~l~~~~~~----~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~ 366 (394)
T COG2814 292 -ALTFTGAS----PALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAA 366 (394)
T ss_pred -HHHHhcch----HHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHH
Confidence 22333332 24566667779998776666666677776678776554 4566666666666544444467777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 013645 408 MLIVMVVGICVALVGILFLTIQVEK 432 (439)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
..+..+++.+++.+..+...++.+|
T Consensus 367 ~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 367 TGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc
Confidence 7777777777777766544444433
No 4
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.95 E-value=4.9e-25 Score=219.60 Aligned_cols=381 Identities=12% Similarity=0.066 Sum_probs=231.8
Q ss_pred cccCccccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHH
Q 013645 19 QVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALIL 94 (439)
Q Consensus 19 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~ 94 (439)
|.+++-..+|++....++.++...+.....+..+.+.+|.+.+.. ..+.....+.+++++.|++.||+|||+++..
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~ 83 (402)
T TIGR00897 4 NNLQKIGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMI 83 (402)
T ss_pred ccHHHcCCCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH
Confidence 334444567777777777766666654444333333333333332 2344555667889999999999999999999
Q ss_pred HhHHHHHHHHhh----h-cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHh
Q 013645 95 GTTGYWLFVAAN----L-FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASH 169 (439)
Q Consensus 95 g~~~~~~~~~~~----~-~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G 169 (439)
+..++++..+.. . .+++..+++.|++.|+|.+...+...+++.++. |+++||+++|+.....++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~----------~~~~~g~~~g~~~~~~~~g 153 (402)
T TIGR00897 84 GLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNT----------KQDNLSSAVGWFWAVYSIG 153 (402)
T ss_pred HHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhC----------CHHHHHHHHHHHHHHHHHH
Confidence 998876654322 2 357888888999999999887776666666665 7889999999999999998
Q ss_pred h-hhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHH-HhccCCCccccccccccchhhhhhHHHHHHHHHHhhc
Q 013645 170 Q-FVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLA 247 (439)
Q Consensus 170 ~-~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (439)
. ++|+.++..+... .+|+...|.. .....++.++. ++.++++++++++ ++ .+ .++..+..++.+|
T Consensus 154 ~~~~g~~~~~~l~~~-----~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~---~~~~~~~~~~~~~ 220 (402)
T TIGR00897 154 IGVFGSYYSSYAIPA-----FGEMNTLWSA-LAFVLTGGVIALFSNKDIFTPQHMQ-TR---EK---FSELGKAATILFT 220 (402)
T ss_pred HHHHHHHHHHhcccc-----cchHHHHHHH-HHHHHHHHHHHHhccCCCCCccccc-CC---cc---hhhHHHHHHHHHc
Confidence 6 5788887666533 2343322222 22222223333 3344432211111 00 01 1111223445778
Q ss_pred cchhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHH
Q 013645 248 DVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVV 327 (439)
Q Consensus 248 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~ 327 (439)
+|+++......+.......-...+.|.++.+.+.+.++.+.+....+++..++++..|+++||+++|+.+...+.+...+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~ 300 (402)
T TIGR00897 221 NPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGI 300 (402)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Confidence 99887765543332222211123444444334555666677777888999999999999999999776443222222222
Q ss_pred HHHHH-Hhh-ccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHHhhh---
Q 013645 328 VFLWI-LIN-YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY--- 402 (439)
Q Consensus 328 ~~~~~-~~~-~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i~~~--- 402 (439)
+...+ ... ...+ + ....+++.+++|++.+...+ ..+.+.+..|++++.++|+++....+|..+++.+.+.
T Consensus 301 ~~~~l~~~~~~~~~-~---~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~ 375 (402)
T TIGR00897 301 FTLALYYIPQHFGH-S---FAVALIIAIALGIFLAGYVP-LAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIG 375 (402)
T ss_pred HHHHHHHHHHccCC-c---HHHHHHHHHHHHHHHHHHHH-HHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 21111 111 1111 1 24455677788888776654 4566778888777778999999998888777655432
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 403 -ISLQAMLIVMVVGICVALVGILFLT 427 (439)
Q Consensus 403 -~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (439)
.++...+++.+++.+++++...|++
T Consensus 376 ~~g~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 376 FFGAIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 3556677777777777776666553
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.95 E-value=5.2e-26 Score=230.96 Aligned_cols=362 Identities=9% Similarity=-0.073 Sum_probs=224.1
Q ss_pred hhhhhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh------hcchhhHH
Q 013645 45 GAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN------LFPSWYTM 114 (439)
Q Consensus 45 ~~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~------~~~~~~~l 114 (439)
.......+.+.+|.+.+... .+.++..+++++++.|+++||+|||+++..+.+.+++..+.. ..+++..+
T Consensus 46 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 125 (467)
T PRK09556 46 KNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLM 125 (467)
T ss_pred cChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHH
Confidence 33444556666665554432 455667788899999999999999999999887766644321 24789999
Q ss_pred HHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchH
Q 013645 115 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 194 (439)
Q Consensus 115 i~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~ 194 (439)
++.|++.|++.+..+++..++++++. |+++||+++|++....++|.++|+++...+..... ..+|+..
T Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~----------~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~--~~~~~~~ 193 (467)
T PRK09556 126 IALWALSGFFQSTGGPCSYSTITRWT----------PRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF--DGHVIGM 193 (467)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHc----------CccceeeeEEeeecccchhhhHHHHHHHHHHHhhc--cCcchhH
Confidence 99999999999999998888888887 88999999999999999999999888766544211 0136653
Q ss_pred HHHHHHHHHHHHHHH-HHhccCCCcc-c--cccc--cc---cchh----hhhhHHHHHHHHHHhhccchhHHHHHHHHHh
Q 013645 195 LFIVFLGVITLGTIL-MCFLRKEEDK-G--EKET--AD---ASVN----FYSYLVSLSKSITTLLADVRMLLIIPLFAYS 261 (439)
Q Consensus 195 ~~~~~~~~~~l~~~~-~~~l~~~~~~-~--~~~~--~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 261 (439)
|.+.+++.++..++ .+++++++++ + +++. .+ .+.+ ++.+.++.+ ..+.+++|++|......++.
T Consensus 194 -f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~ 270 (467)
T PRK09556 194 -FIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIF--VEYVLKNPVIWLLCFANIFL 270 (467)
T ss_pred -HHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHH--HHHHHcChHHHHHHHHHHHH
Confidence 44444444433333 3444543221 1 0000 00 0000 000111111 12367899988876654433
Q ss_pred hHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCC
Q 013645 262 GLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTS 340 (439)
Q Consensus 262 g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~ 340 (439)
.........+.|.++.+ .+++..+.+.......++.++++++.|+++||+++|+.++ .......++...+..... +
T Consensus 271 ~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~-~~~~~~~~~~~~~~~~~~-~- 347 (467)
T PRK09556 271 YIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALV-ACIALALIIFTLGVYQHA-T- 347 (467)
T ss_pred HHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHH-HHHHHHHHHHHHHHHHhc-C-
Confidence 32221222345544432 4566667777777888999999999999999999876443 222222222111112221 2
Q ss_pred CccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHH-HHH-----HHHHHhh-----------h
Q 013645 341 GVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCA-SIA-----VVFFIGP-----------Y 402 (439)
Q Consensus 341 ~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~-g~~-----i~~~i~~-----------~ 402 (439)
+ .....+..++.|++.............|.+|++. +.+.|+.+...++ |.+ +|.+.++ .
T Consensus 348 ~---~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~ 424 (467)
T PRK09556 348 S---EYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTL 424 (467)
T ss_pred c---HHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccc
Confidence 1 2334455666665443333334466779999875 5678888877775 533 3455551 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 403 ISLQAMLIVMVVGICVALVGILFLT 427 (439)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (439)
.++...++++.+..+++++.++++.
T Consensus 425 ~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 425 TGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577888888888888888887665
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.95 E-value=1.6e-25 Score=223.65 Aligned_cols=374 Identities=11% Similarity=0.014 Sum_probs=230.0
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHH
Q 013645 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (439)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~ 100 (439)
+.++.++.+.+++.+............+.+.+|.+++.. ..+..+..+++++++.|++.||+|||+++..+.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 84 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWG 84 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHH
Confidence 345566666666666666666666666667666555543 3556666788899999999999999999999999887
Q ss_pred HHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHH
Q 013645 101 LFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (439)
Q Consensus 101 ~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~ 179 (439)
+.... ...+|+..+++.|++.|++.+..+++..++++++. |+++||+++|++.....+|.++|++++..
T Consensus 85 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~rg~~~~~~~~~~~~g~~~~~~~~~~ 154 (412)
T TIGR02332 85 IASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWF----------PAYFRARANALFMIAMPVTMALGLILSGY 154 (412)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76655 36788999999999999999999988888888887 78899999999999999999999999887
Q ss_pred hhcCCC-CCCCCcchHHHHHHHHHHHHH-HHHHHhccCCCccc----ccccccc------c-----hhh-h-hhHHHHHH
Q 013645 180 VLKDDK-GGSTSGTTLLFIVFLGVITLG-TILMCFLRKEEDKG----EKETADA------S-----VNF-Y-SYLVSLSK 240 (439)
Q Consensus 180 l~~~~~-~~~~~w~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~----~~~~~~~------~-----~~~-~-~~~~~~~~ 240 (439)
+..... .+..+||+.++ +.++..++. .+..+++||++++. +++.++. + .++ . .+.+...+
T Consensus 155 l~~~~~~~~~~gwr~~f~-~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (412)
T TIGR02332 155 ILALDGLMALKGWQWLFL-LEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQR 233 (412)
T ss_pred HHhCCCCCCccchhHHHH-HHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHH
Confidence 753210 11247988544 444444433 33446677754321 1110000 0 000 0 00000001
Q ss_pred HHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhcc--cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceeh
Q 013645 241 SITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP--ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIV 318 (439)
Q Consensus 241 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~ 318 (439)
...+.+++|.++.....+++.........+++|..+.+. +.+....+.......++.++|.++.|+++||+++|+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~ 313 (412)
T TIGR02332 234 SMLREIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHT 313 (412)
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHH
Confidence 112233456666655544433332322334666655432 233445677778899999999999999999998766433
Q ss_pred hhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHH
Q 013645 319 SGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVF 397 (439)
Q Consensus 319 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~ 397 (439)
....+...+.+. +....++. .....+..+.+++.....+..+....+.+|++. +.++|+.+...++|.++++
T Consensus 314 ~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p 386 (412)
T TIGR02332 314 ALPYLFAAAGWL--LASATDHN-----LIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSP 386 (412)
T ss_pred HHHHHHHHHHHH--HHHhcCCH-----HHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhh
Confidence 333333333322 11122121 222222223333332333334444456677654 4578999888888888776
Q ss_pred HHhh-----hhhHHHHHHHHHHHH
Q 013645 398 FIGP-----YISLQAMLIVMVVGI 416 (439)
Q Consensus 398 ~i~~-----~~~~~~~~~~~~~~~ 416 (439)
.+.+ ..++...++..+++.
T Consensus 387 ~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 387 FLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred hhcccccccCCCCchhHHHHHHHH
Confidence 4432 235666666655543
No 7
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.95 E-value=3.5e-25 Score=220.74 Aligned_cols=370 Identities=14% Similarity=0.052 Sum_probs=228.8
Q ss_pred hhHHHHHHHHHHHHH---HHhhhhhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHH
Q 013645 28 RDVHILSCAFLLIFL---AYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~---~~~~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~ 100 (439)
+++..+.++++..+. .........+.+.++.+.+... .+.......+++++.|++.||+|||+++..+.++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 91 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFG 91 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 444444445444433 3334445556665554554433 344455566788999999999999999999988776
Q ss_pred HHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHH
Q 013645 101 LFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (439)
Q Consensus 101 ~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~ 179 (439)
+..+. ...+++..+++.|++.|++.+..++...++++|+. |+++|++++|++.....+|..+++.++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 161 (406)
T PRK11551 92 LFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAV----------GPRLRGTAVSLMYCGVPFGGALASVIGVL 161 (406)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65443 35688888889999999999999888888888887 78899999999999999999999888766
Q ss_pred hhcCCCCCCCCcchHHHHHHHHHHHHHHH-HHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHH
Q 013645 180 VLKDDKGGSTSGTTLLFIVFLGVITLGTI-LMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLF 258 (439)
Q Consensus 180 l~~~~~~~~~~w~~~~~~~~~~~~~l~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 258 (439)
+... .+|+.. |.+..++.++..+ ...++||+++..+++..+ +..++..+ ...+..+.++.+.+....
T Consensus 162 ~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~ 229 (406)
T PRK11551 162 AAGD-----AAWRHI-FYVGGVGPLLLVPLLMRWLPESRAFAQAAGAG---KQRAPVLR---ALFGEGRATATLLLWISY 229 (406)
T ss_pred Hccc-----cCHHHH-HHHHHHHHHHHHHHHHHhCCCChhHHhccCcc---hhhhhhHH---HHhhhhhhhHHHHHHHHH
Confidence 5432 358764 3344444333333 234567754321111000 00011111 111111112222222222
Q ss_pred HHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccC
Q 013645 259 AYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV 338 (439)
Q Consensus 259 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~ 338 (439)
+...........++|..+.+.+.+....+......+++.++++++.|++.||+++|+.+ ..+.+...+++. .....+
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~-~~~~~~~~~~~~--~~~~~~ 306 (406)
T PRK11551 230 FFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVV-LLIYAGILASLA--ALAAAP 306 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHHH--HHHhcC
Confidence 21111111222344544444556666788888889999999999999999999987643 333333333322 222332
Q ss_pred CCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHH
Q 013645 339 TSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI-----SLQAMLIVM 412 (439)
Q Consensus 339 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~~-----~~~~~~~~~ 412 (439)
+ .....+..++.|++.+..++..+++..+.+|++. +.+.|.++....+|..+++.+.+.. ++...+++.
T Consensus 307 ~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~ 381 (406)
T PRK11551 307 S-----FAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGAS 381 (406)
T ss_pred c-----HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHH
Confidence 2 2345566777888887888889999999998875 4578888888888888777665542 344445555
Q ss_pred HHHHHHHHHHHHHHH
Q 013645 413 VVGICVALVGILFLT 427 (439)
Q Consensus 413 ~~~~~~~~~~~~~~~ 427 (439)
+...+++.+..+++.
T Consensus 382 ~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 382 IPVILVAALAALLLV 396 (406)
T ss_pred HHHHHHHHHHHHHHh
Confidence 555555555544443
No 8
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.95 E-value=4e-25 Score=222.31 Aligned_cols=368 Identities=10% Similarity=0.001 Sum_probs=205.2
Q ss_pred HHHHHHHHHHhhhhhhHhhhccCC---CCchH-------HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHH
Q 013645 35 CAFLLIFLAYGAAQNLETTVNTEG---NLGTI-------SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA 104 (439)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~l~~~~---~~g~~-------~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 104 (439)
++.++....+.......+.+.+|. +.... ..+.-+....+++++.|+++||+|||+++..+.+.+++.+.
T Consensus 29 ~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~ 108 (432)
T PRK10406 29 SGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSL 108 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 344444444444445555555442 12111 12233334448889999999999999999999999888766
Q ss_pred hh-hcchh--------hHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhH
Q 013645 105 AN-LFPSW--------YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNL 175 (439)
Q Consensus 105 ~~-~~~~~--------~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~ 175 (439)
.. ..+++ ..+++.|+++|+|.|..++...++++|+. |+++||++.++.......|..+++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~----------p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 109 VIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVA----------VEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhC----------CCCcccHHHHHHHHHHHHHHHHHHH
Confidence 54 45654 35788999999999999999999999997 8899999999888777788777776
Q ss_pred HHHHhhcCCC---CCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhH
Q 013645 176 ITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRML 252 (439)
Q Consensus 176 i~~~l~~~~~---~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (439)
+...+..... ....+||..++ +..+..++.......+||+++.+ + ++ .+ + + .+.++.+++++.+
T Consensus 179 ~~~~~~~~~~~~~~~~~gWr~~F~-i~~~~~ll~~~~~~~~~e~~~~~--~-~~---~~--~-~---~~~~~l~~~~~~~ 245 (432)
T PRK10406 179 VVVVLQQTLEDAELREWGWRIPFA-LGAVLAVVALWLRRQLDETSQQE--T-RA---LK--E-A---GSLKGLWRNRRAF 245 (432)
T ss_pred HHHHHHHhCCHHHHhccchHHHHH-HHHHHHHHHHHHHhcCCCCchHH--H-hh---hc--c-c---ccHHHHHhhHHHH
Confidence 6544432110 01357988543 33333333222212233322110 0 00 00 0 0 1233456677776
Q ss_pred HHHHHHHHh-hHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHH
Q 013645 253 LIIPLFAYS-GLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 330 (439)
Q Consensus 253 ~l~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~ 330 (439)
......+.. .........++|+++.+ .+.+.++.+.......++.+++..+.|+++||++||+.++ .+.++.++...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~-~~~~~~~~~~~ 324 (432)
T PRK10406 246 IMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSML-CFGSLAALFTV 324 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH-HHHHHHHHHHH
Confidence 554433222 22111123455555432 3455556677777777778888899999999999887543 33332222111
Q ss_pred HHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHH-HHHHHHHH----Hhhhhh
Q 013645 331 WILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQC-ASIAVVFF----IGPYIS 404 (439)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~-~g~~i~~~----i~~~~~ 404 (439)
..........+ .........+..+..+...+..+++..|.+|++. +.+.|+.+...+ +.....+. ++...+
T Consensus 325 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~ 401 (432)
T PRK10406 325 PILSALQNVSS---PYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGM 401 (432)
T ss_pred HHHHHHHcCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 11111111111 1222222222222233344567788999999875 457775444332 22222322 222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 405 LQAMLIVMVVGICVALVGILFLTIQ 429 (439)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (439)
+...++..++..+++.+..+++++|
T Consensus 402 ~~~~~~~~~~~~~i~~~~~~~l~~~ 426 (432)
T PRK10406 402 ETAFFWYVTLMAVVAFLVSLMLHRK 426 (432)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhhc
Confidence 4445555666666766666665443
No 9
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.95 E-value=7.5e-25 Score=220.43 Aligned_cols=391 Identities=10% Similarity=0.012 Sum_probs=230.2
Q ss_pred ccccccccccccCccccchhHH--HHHHHHHHHHHHHhhhhhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHH
Q 013645 10 EAPLVADSLQVLTPKNYTRDVH--ILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVV 83 (439)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~ 83 (439)
++|+.++......+.++.++.+ .+.+++++.+..........+.+.++.+.+... .+.....+++++++.|++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~ 82 (434)
T PRK11663 3 DAPLITDKHEIDARYRYWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVS 82 (434)
T ss_pred CCCCCCCHHHHHhHhHHHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 4666666554444333333222 222333333333334444555665555554433 3445556778899999999
Q ss_pred HHhchhHHHHHHhHHHHHHHHhh-hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHH
Q 013645 84 RVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEF 162 (439)
Q Consensus 84 dr~G~r~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~ 162 (439)
||+|||+++.++.++.++..+.. ..++++.+++.|++.|++.|..++...+++++++ |+++||+++|++
T Consensus 83 dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~----------~~~~rg~~~~~~ 152 (434)
T PRK11663 83 DRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWY----------SRTERGGWWAIW 152 (434)
T ss_pred hhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhC----------CHHHHHHHHHHH
Confidence 99999999999998877766543 5788888888999999999988888888888886 778999999999
Q ss_pred HHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHH-HHHHHhccCCCccc---cc-----cccccchh---
Q 013645 163 WGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLG-TILMCFLRKEEDKG---EK-----ETADASVN--- 230 (439)
Q Consensus 163 ~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~---~~-----~~~~~~~~--- 230 (439)
....++|.++|+.+...+... .+||+.++ +.+++.++. .+..+++||+++.. +. +..+.+.+
T Consensus 153 ~~~~~~g~~~~~~~~~~l~~~-----~gw~~~f~-~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 226 (434)
T PRK11663 153 NTAHNVGGALIPLVVGAIALH-----YGWRYGMM-IAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEG 226 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----ccHHHHHH-HHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccc
Confidence 999999999999988877643 36887533 334433333 33344566643211 00 00000000
Q ss_pred hhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhh-cccccccchHHHHHHHHHHHHHHHHhhhhhhc
Q 013645 231 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTT 309 (439)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d 309 (439)
+..+.++.++ ...+++|+++.+....+...........++|.++. ..+++.++.+.....++++.++++++.|+++|
T Consensus 227 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~d 304 (434)
T PRK11663 227 AGLSRKEILT--KYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSD 304 (434)
T ss_pred cCCChhhhHH--HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 0011111111 12567888877655433333222223345555542 23566667777788899999999999999999
Q ss_pred CCC--CcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHH
Q 013645 310 GLP--SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLK 386 (439)
Q Consensus 310 ~~~--~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~ 386 (439)
|+. +|+.......+...+.... +.... ..+ ........+.+|++.............+.+|++. +.+.|+.+
T Consensus 305 r~~~~~r~~~~~~~~~~~~~~~~~-~~~~~-~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 379 (434)
T PRK11663 305 KLFNGNRGPMNLIFAAGILLSVGS-LWLMP-FAS---YVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVG 379 (434)
T ss_pred HhccCCccHHHHHHHHHHHHHHHH-HHHcc-ccc---HHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHH
Confidence 983 3332211111111111111 11122 211 1223333344454333223344566788887654 45788888
Q ss_pred HHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHHHHHH
Q 013645 387 VWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGI 423 (439)
Q Consensus 387 ~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~~~~~~~ 423 (439)
....+|.++++.+.+ ..++...++..+++.+++++..
T Consensus 380 ~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~ 420 (434)
T PRK11663 380 LFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLL 420 (434)
T ss_pred HHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 888888877754433 2356677777777766665544
No 10
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.95 E-value=3.1e-24 Score=214.11 Aligned_cols=308 Identities=13% Similarity=0.063 Sum_probs=201.3
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhh
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~ 143 (439)
.+.....+.+++++.|+++||+|||+++..+.....+.... ...++++.+++.|++.|++.+..++...+++.|..
T Consensus 54 ~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~--- 130 (406)
T PRK15402 54 MTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESF--- 130 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHh---
Confidence 45566667788899999999999999999998877665554 35678888889999999999988887778887776
Q ss_pred hhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHH-HhccCCCccccc
Q 013645 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEK 222 (439)
Q Consensus 144 a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~-~~l~~~~~~~~~ 222 (439)
|+++|+++.++......+|..+||.++..+..+ .+||+. |++..++.++..+.. ..+||+++++++
T Consensus 131 -------~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-----~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (406)
T PRK15402 131 -------EEADAIKITALMANVALLAPLLGPLVGAALIHV-----LPWRGM-FVLFAALAALSFFGLWRAMPETAGRVGE 197 (406)
T ss_pred -------ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCccHH-HHHHHHHHHHHHHHHHHhCCCCCccccc
Confidence 778899999998888888899999988877653 358874 444455554444332 345554322111
Q ss_pred cccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhh-cccccccchHHHHHHHHHHHHHHH
Q 013645 223 ETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICS 301 (439)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~ig~ 301 (439)
+ .+.++..++.++.++||+++.......+.......+....|..+. ..+.+..+.+.......++.++++
T Consensus 198 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~ 268 (406)
T PRK15402 198 K---------LSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGN 268 (406)
T ss_pred c---------ccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 001112233456788998877655433333222222222333322 234455566776666777889999
Q ss_pred HhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhc-cCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchh
Q 013645 302 LAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINY-SVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG 380 (439)
Q Consensus 302 ~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~ 380 (439)
++.|+++||.++|+. +..+.+...++........ ....+ ..+..+..+++|++.+...+..++......|++++.
T Consensus 269 ~~~g~l~~r~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~ 344 (406)
T PRK15402 269 LTLARLTSRRPLRSL-IRMGLWPMVAGLLLAALATVISSHA---YLWLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGT 344 (406)
T ss_pred HHHHHHHHhcCHHHH-HHHHHHHHHHHHHHHHHHHHccccc---HHHHHHHHHHHHHHHHHHhhhHHHHHhhhccccccH
Confidence 999999999997764 3455554443332111111 11111 244567788889988887777776665555656667
Q ss_pred hHHHHHHHHHHHHHHHHHHhh
Q 013645 381 AFAQLKVWQCASIAVVFFIGP 401 (439)
Q Consensus 381 a~s~~~~~~~~g~~i~~~i~~ 401 (439)
+.+.+++.+.++..++..+.+
T Consensus 345 ~~~~~~~~~~~~~~~g~~~~~ 365 (406)
T PRK15402 345 VSAAMGMLSMLIFTVGIELSK 365 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888777765554
No 11
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.95 E-value=4.3e-25 Score=216.72 Aligned_cols=346 Identities=12% Similarity=0.029 Sum_probs=220.5
Q ss_pred HhhhhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHH
Q 013645 44 YGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPAS 118 (439)
Q Consensus 44 ~~~~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r 118 (439)
..+...+.|.+.++.+.... ..+.....+++++++.|+++||+|||+++..+.++.++..+. ...++++.+++.|
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTY 98 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566666665454443 345566677888999999999999999999999887776554 4678999999999
Q ss_pred HHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHH
Q 013645 119 LYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIV 198 (439)
Q Consensus 119 ~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~ 198 (439)
++.|++.+..++....++.++. +++|+++.++.....++|..+++++...+... .+||+. |.+
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~-f~~ 161 (377)
T TIGR00890 99 GLASAGVGIAYGIALNTAVKWF-----------PDKRGLASGIIIGGYGLGSFILSPLITSVINL-----EGVPAA-FIY 161 (377)
T ss_pred HHHhHHHHHHHHhHHHHHHHHc-----------CcccHHHHHHHHHhcchhHhHHHHHHHHHHhc-----ccHHHH-HHH
Confidence 9999999988777666665553 46899999999998889887766555544332 358874 444
Q ss_pred HHHHHHHHHHH-HHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhh
Q 013645 199 FLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV 277 (439)
Q Consensus 199 ~~~~~~l~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~ 277 (439)
.+++.++..+. .+++++++++++++.++. + ..+ ++.++.+++|+++......+............++++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (377)
T TIGR00890 162 MGIIFLLVIVLGAFLIGYPPGQLIKTNIEV--S---VKD---YTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQ 233 (377)
T ss_pred HHHHHHHHHHHHHHheecCchhccccCccc--c---hhh---hhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45545443333 345555433211110000 0 001 12345678888876655444333322222223333322
Q ss_pred cccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhh
Q 013645 278 TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 357 (439)
Q Consensus 278 ~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 357 (439)
+.+.+.+..+......+++.++++++.|++.||++||+.+ ..+.++..++.. ...+.++.+ ....+...++.|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~-~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~g~ 307 (377)
T TIGR00890 234 SLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTM-SIVFGISAVGMA--AMLFIPMLN---DVLFLATVALVFF 307 (377)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hHHHHHHHHHHH--HHHHcccch---hHHHHHHHHHHHH
Confidence 2334445567777889999999999999999999988644 455555554432 222332221 1233345566777
Q ss_pred hhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHH
Q 013645 358 GDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVAL 420 (439)
Q Consensus 358 ~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~~~~~~ 420 (439)
+.+...+..++++.|.+|+++ +.+.|.++....+|..+++.+.+. .++...+.+.+++.+++.
T Consensus 308 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 308 TWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 777777777889999998775 457888888888888887765543 356666666665555443
No 12
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.95 E-value=6.9e-25 Score=222.99 Aligned_cols=377 Identities=14% Similarity=0.045 Sum_probs=221.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHH
Q 013645 29 DVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA 104 (439)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 104 (439)
.+.....++++.+..........+.+.++.+++... .+.....+.+++++.|+++||+|||+++..+.+.+++..+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~ 116 (476)
T PLN00028 37 AFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVF 116 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 333333334444444444445556666555554332 3344556677889999999999999999999888777655
Q ss_pred h-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhc-
Q 013645 105 A-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK- 182 (439)
Q Consensus 105 ~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~- 182 (439)
. ...+++..++++|++.|++.+...+ ...+++++. |+++||+++|+.....++|..+|+.+...+..
T Consensus 117 ~~~~~~s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~----------~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~ 185 (476)
T PLN00028 117 CMSLVSSATGFIAVRFFIGFSLATFVS-CQYWMSTMF----------NGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPL 185 (476)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhhHH-HHHHHHHhc----------ChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 3567888888899999999876543 344566665 78899999999887777888877766544322
Q ss_pred ---CCCCCCCCcchHHHHHHHHHHHHHHHHHHhccC-CCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHH
Q 013645 183 ---DDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK-EEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLF 258 (439)
Q Consensus 183 ---~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 258 (439)
....+..+||+. |.+.+++.++..+..+++++ +++.+.++..++...++.+.. +..++.++++++|.+...+
T Consensus 186 ~~~~~~~~~~gWr~~-f~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 261 (476)
T PLN00028 186 IKDAGAPSFTAWRIA-FFVPGLLHIIMGILVLTLGQDLPDGNYRELKKSGTMPKDSFS---KVLRYGVTNYRTWILALTY 261 (476)
T ss_pred HHhcCCcchhhhHHH-HHHHHHHHHHHHHHHHHHcCcCCCCchhhHHhcCccccccHH---HHHHHHHcCchhHHHHHHH
Confidence 101112469885 44455555544444444443 222111110000000001111 2344567888887765543
Q ss_pred HHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcc----e--ehhhHHHHHHHHHHH
Q 013645 259 AYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSIT----F--IVSGGAIAQVVVFLW 331 (439)
Q Consensus 259 ~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~----~--~~~~g~~~~~~~~~~ 331 (439)
+..........++.|.++.+ .+++.+..+.+...++++.++++++.|+++||+++|+ . +.....++..+...
T Consensus 262 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~- 340 (476)
T PLN00028 262 GYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCI- 340 (476)
T ss_pred HHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHH-
Confidence 32211111122344444432 3566667788888899999999999999999987542 1 11112222222111
Q ss_pred HHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHHhh---hhhHHHH
Q 013645 332 ILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGP---YISLQAM 408 (439)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i~~---~~~~~~~ 408 (439)
.....++ .....+..++++++.....+..+++..++.|++++.+.|+.+....+|..+++.+.. ..++...
T Consensus 341 -~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~ 414 (476)
T PLN00028 341 -WLGRANS-----LGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETG 414 (476)
T ss_pred -Hhcccch-----HHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhH
Confidence 2222222 133334445555555445555666667777766666778877777777766554432 3357788
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 013645 409 LIVMVVGICVALVGILFLT 427 (439)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~ 427 (439)
++..+++.+++++..+++.
T Consensus 415 f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 415 ISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHHHHHHHHHHhee
Confidence 8888888888888887664
No 13
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.95 E-value=4.8e-24 Score=212.53 Aligned_cols=370 Identities=14% Similarity=0.099 Sum_probs=232.8
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCc---------hHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHh
Q 013645 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLG---------TISLGILYTSFTCFSLVASLVVRVLGSKNALILGT 96 (439)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g---------~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~ 96 (439)
++++...+.++.++...++.....+.+.+.++.+.. ....++.+....+++++.|+++||+|||+++..+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 91 (408)
T PRK09874 12 WKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSA 91 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHH
Confidence 355566666666666666555544445444332222 11234455566788899999999999999999988
Q ss_pred HHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhH
Q 013645 97 TGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNL 175 (439)
Q Consensus 97 ~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~ 175 (439)
+..++..+. ...++++.+++.|++.|++.+. .+...+++.+.. |+++|+++.|+.....++|..+|+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (408)
T PRK09874 92 LGMGIVMVLMGLAQNIWQFLILRALLGLLGGF-VPNANALIATQV----------PRNKSGWALGTLSTGGVSGALLGPL 160 (408)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhh-HHhHHHHHHHhc----------CHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 877665544 3467888888999999998654 455555666554 7889999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHH-HHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHH
Q 013645 176 ITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLI 254 (439)
Q Consensus 176 i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (439)
++..+... .+||.. |.+..++.++..+. .+++||+++..+++ +..+ .++..+.+++++++..
T Consensus 161 ~~~~l~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~----~~~~~~~~~~~~~~~~ 223 (408)
T PRK09874 161 AGGLLADS-----YGLRPV-FFITASVLFLCFLVTLFCIRENFQPVSKK-------EMLH----MREVVTSLKNPKLVLS 223 (408)
T ss_pred HHHHHHHH-----hCHHHH-HHHHHHHHHHHHHHHHHHhccCcccccch-------hhhH----HHHHHHhCcCCchHHH
Confidence 88877543 247764 44445544444443 34556543211110 0011 1223456778877543
Q ss_pred HH-HHHHhhHHHHHHHhhcchhhhccccccc----chHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHH
Q 013645 255 IP-LFAYSGLQQAFVWAEFTKEIVTPALGVS----GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVF 329 (439)
Q Consensus 255 ~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~ 329 (439)
.. ..+..........+.++.+..+...+.+ ..+.+..+.+++.+++.+..|+++||+++|+.+ ..+..+..++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~-~~~~~~~~~~~ 302 (408)
T PRK09874 224 LFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKIL-ITALIFSVLLL 302 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhH-HHHHHHHHHHH
Confidence 22 1222222222222233333222111112 234455667888889999999999999987643 45554444433
Q ss_pred HHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhh----hhh
Q 013645 330 LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP----YIS 404 (439)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~----~~~ 404 (439)
. ...+.++ ....++..+++|++.+...+...+.+.+..|++. +++++.++..+.+|..+++.+.+ ..+
T Consensus 303 ~--~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g 375 (408)
T PRK09874 303 I--PMSFVQT-----PLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG 375 (408)
T ss_pred H--HHHHhcc-----HHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc
Confidence 2 2233322 2455667788899999999998888888887664 55778887878888777776654 346
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013645 405 LQAMLIVMVVGICVALVGILFLTIQVE 431 (439)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
+...+++.+++.+++++..++..+|.+
T Consensus 376 ~~~~f~~~~~~~l~~~~~~~~~~~~~~ 402 (408)
T PRK09874 376 FRAVFLVTAGVVLFNAVYSWNSLRRRR 402 (408)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 788888888888887776655544443
No 14
>PRK03699 putative transporter; Provisional
Probab=99.94 E-value=6.4e-24 Score=211.00 Aligned_cols=372 Identities=14% Similarity=-0.002 Sum_probs=227.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHH
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~ 103 (439)
|-.+...+++++..........+.+++.++.+.+... .+..+..+.+++++.|++.||+|||+++..+.++..+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 86 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAV 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 4444444444444444444455556666655554432 344555677889999999999999999999988776655
Q ss_pred Hh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhc
Q 013645 104 AA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (439)
Q Consensus 104 ~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~ 182 (439)
.. ...+++..+++.|++.|++.+..++...+++++.. |+++|+++++.......+|..+++.+...+..
T Consensus 87 ~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 156 (394)
T PRK03699 87 AGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVY----------EGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA 156 (394)
T ss_pred HHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhc----------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 54 35688888889999999999988887777887776 77899999998888888888888887766643
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhh
Q 013645 183 DDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSG 262 (439)
Q Consensus 183 ~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 262 (439)
.. .+||+. |.+..++.++..++.++.+.|+.+++++ + + .+ +. . +...+++++......++..
T Consensus 157 ~~----~gw~~~-f~~~~~~~~~~~~~~~~~~~p~~~~~~~--~-~-~~-~~----~----~~~~~~~~~~~~~~~~~~~ 218 (394)
T PRK03699 157 RS----IEWYWV-YACIGLVYVAIFILTLFSEFPALGKHAP--K-A-DK-PV----A----KEKWGIGVLFLAIAALLYI 218 (394)
T ss_pred cc----ccHHHH-HHHHHHHHHHHHHHHHhcCCccccccCc--c-c-cC-cc----c----cccCChHHHHHHHHHHHHH
Confidence 21 368874 3333444433333333332232111111 0 0 00 00 0 1112455554443333222
Q ss_pred HHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCC
Q 013645 263 LQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSG 341 (439)
Q Consensus 263 ~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~ 341 (439)
........+.|.++.+ .+++.++.+.....++++..+++++.|+++||+++|+.+. ....+..+.+. .+...++.
T Consensus 219 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~-~~~~~~~~~~~--~~~~~~~~- 294 (394)
T PRK03699 219 LAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILT-VLAGLALVLMY--LFVNTDDP- 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHH-HHHHHHHHHHH--HHHHcCCc-
Confidence 2222223455555533 3566667888888889999999999999999999886443 33333333222 22233332
Q ss_pred ccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHH
Q 013645 342 VLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGIC 417 (439)
Q Consensus 342 ~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~ 417 (439)
....+..+++|++.+...+...++..+..|++++...+.......+|..+++.+.+ ..++...++..++..+
T Consensus 295 ----~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~ 370 (394)
T PRK03699 295 ----SHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYA 370 (394)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHH
Confidence 34445667788887777888888888888776655666655666677776665543 2355566665555555
Q ss_pred HHHHHHHHHHHHHhhhhcC
Q 013645 418 VALVGILFLTIQVEKAFYS 436 (439)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~ 436 (439)
++.+. .....|.+|++|.
T Consensus 371 ~~~~~-~~~~~~~~~~~~~ 388 (394)
T PRK03699 371 VVFVM-CILLGFVSKHRQH 388 (394)
T ss_pred HHHHH-HHHHHHHHHHHhc
Confidence 44432 3444555555553
No 15
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.94 E-value=8.5e-24 Score=210.01 Aligned_cols=329 Identities=12% Similarity=0.032 Sum_probs=210.8
Q ss_pred hhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhh
Q 013645 48 QNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLG 122 (439)
Q Consensus 48 ~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~G 122 (439)
..+.+.+.++.+.+.. ..+.......+++++.|++.||+|||+++..+.++.++..+. ...++++.+++.|+++|
T Consensus 40 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 119 (394)
T PRK10213 40 VSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLG 119 (394)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 3445555555444443 234455566788899999999999999999999988775544 35688999999999999
Q ss_pred hHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHH
Q 013645 123 FAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGV 202 (439)
Q Consensus 123 ig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~ 202 (439)
++.+..++...++++|+. |+++|+++.++.....++|..+|++++..+... .+||+.++ +.+++
T Consensus 120 ~~~g~~~~~~~~~i~~~~----------~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~-----~gw~~~f~-~~~~l 183 (394)
T PRK10213 120 LALGGFWAMSASLTMRLV----------PPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL-----IGWRNVFN-AAAVM 183 (394)
T ss_pred HhhHHHHHHHHHHHHHHc----------CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cCHHHHHH-HHHHH
Confidence 999999999888888887 889999999999999999999999999888653 36887543 33444
Q ss_pred HHHHHHHH-HhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhh-hccc
Q 013645 203 ITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI-VTPA 280 (439)
Q Consensus 203 ~~l~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~-~~~~ 280 (439)
.++..+.. ..+||++++ ++ +. ++ +..+.+++|+++......+...........++++.+ .+.+
T Consensus 184 ~~~~~l~~~~~~p~~~~~--~~------~~----~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g 248 (394)
T PRK10213 184 GVLCIFWIIKSLPSLPGE--PS------HQ----KQ---NTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAG 248 (394)
T ss_pred HHHHHHHHHHHCCCCCcc--cc------cc----hh---HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 44333222 224443211 10 00 01 123567888887654432222211111122332222 2345
Q ss_pred ccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhh
Q 013645 281 LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG 360 (439)
Q Consensus 281 ~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 360 (439)
++.+..+.....++++.++++++.|++.||.+ |+.++ .+..+..++... +..+.++ .+...+..+++|++.+
T Consensus 249 ~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~-~~~~~~~~~~~~-l~~~~~~-----~~~~~~~~~l~G~~~~ 320 (394)
T PRK10213 249 FGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALA-GAPLVLAVSALV-LTLWGSD-----KIVATGVAIIWGLTFA 320 (394)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHH-HHHHHHHHHHHH-HHHHhhh-----HHHHHHHHHHHHHHHH
Confidence 66667888888899999999999999999954 33232 333332222111 2223322 2455667888999999
Q ss_pred hhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHH
Q 013645 361 VLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVG 415 (439)
Q Consensus 361 ~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~ 415 (439)
..++..++++.+..|++.+.+.+.+....++|..+|+.+.+. .++...+....++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~ 379 (394)
T PRK10213 321 LVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTL 379 (394)
T ss_pred hhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHH
Confidence 999999989998888765555454444555555555544433 3444444444333
No 16
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=2.2e-24 Score=220.26 Aligned_cols=346 Identities=11% Similarity=0.035 Sum_probs=200.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhhccCCC----C--ch---HH-HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhH
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGN----L--GT---IS-LGILYTSFTCFSLVASLVVRVLGSKNALILGTT 97 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~----~--g~---~~-~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~ 97 (439)
+.++...++.++....+.......+.+.++.. . .. .. .++.+..+++++++.|+++||+|||+++.++.+
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 95 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIV 95 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 34455556666655555444444444433311 1 11 11 355667788999999999999999999999999
Q ss_pred HHHHHHHhh-hcchhhH--------HHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHH
Q 013645 98 GYWLFVAAN-LFPSWYT--------MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS 168 (439)
Q Consensus 98 ~~~~~~~~~-~~~~~~~--------li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~ 168 (439)
++++..+.. ..+++.. ++++|+++|+|.|..+++..++++|++ |+++||++.++...+..+
T Consensus 96 l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~----------p~~~Rg~~~~~~~~~~~~ 165 (490)
T PRK10642 96 IMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYS----------PDRKRGFMGSWLDFGSIA 165 (490)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhC----------CCCCCcHHHHHHHHHHHH
Confidence 988877654 6777653 788999999999999999999999997 889999999998888888
Q ss_pred hhhhhhHHHHHhhcCCC---CCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccc-ccccc--chhhhhhHHHHHHHH
Q 013645 169 HQFVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEK-ETADA--SVNFYSYLVSLSKSI 242 (439)
Q Consensus 169 G~~iG~~i~~~l~~~~~---~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~ 242 (439)
|..+|+.+...+..... ....+||..+++ ..++.+++.++...+||+++..++ +..++ +....+..+. +.
T Consensus 166 G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i-~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~---~~ 241 (490)
T PRK10642 166 GFVLGAGVVVLISTIVGEANFLDWGWRIPFFI-ALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKV---SF 241 (490)
T ss_pred HHHHHHHHHHHHHHhcCHHHhcCccHHHHHHH-HHHHHHHHHHHHHcCCCChhHHHHHHhhhhhccccccccccC---CH
Confidence 88888766554432110 013579985443 333333333333456664331100 00000 0000000000 11
Q ss_pred HHhhc-cchhHHHHH-HHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehh
Q 013645 243 TTLLA-DVRMLLIIP-LFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVS 319 (439)
Q Consensus 243 ~~~~~-~~~~~~l~~-~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~ 319 (439)
.+.++ +++.+.... ..+...........++|.++.. .+++.+..+.......++.+++.++.|+++||+|||+.+ .
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~-~ 320 (490)
T PRK10642 242 KEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFV-I 320 (490)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-H
Confidence 12222 223222221 1121222111222344544422 244444455566677888899999999999999988744 3
Q ss_pred hHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHH-HHHHHHHH
Q 013645 320 GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQ-LKVWQCAS 392 (439)
Q Consensus 320 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~-~~~~~~~g 392 (439)
.+.+...+....++.....+ + ....++..++.|++.+...+...+++.+++|++.+ .+.+. +++....|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g 391 (490)
T PRK10642 321 LGSVALFVLAIPAFILINSN-V---IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVA 391 (490)
T ss_pred HHHHHHHHHHHHHHHHHhCC-C---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHH
Confidence 44433222111111111111 1 23445556666776666667778888899998865 46774 66654443
No 17
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.94 E-value=4.8e-24 Score=210.92 Aligned_cols=356 Identities=16% Similarity=0.141 Sum_probs=227.3
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHH
Q 013645 24 KNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (439)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~ 99 (439)
++++|+++.+.++.++...+......+.|.+.++.+.+... .+.....+.+++++.|++.||+|||+++..+.+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~ 81 (381)
T PRK03633 2 STYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIF 81 (381)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 35678888888888887777776666677666665555433 44455566778899999999999999999999887
Q ss_pred HHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHH
Q 013645 100 WLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (439)
Q Consensus 100 ~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~ 178 (439)
.+.... ...++++.++++|+++|++.+..++...+.+.+.. ++++|++++|++....++|..+|+.++.
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 151 (381)
T PRK03633 82 AAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSG----------TSRNRGRLLAAYMMVYYLGTVLGQLLVS 151 (381)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 765544 35788999999999999999988887666665554 6789999999999999999999999888
Q ss_pred HhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHH
Q 013645 179 AVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLF 258 (439)
Q Consensus 179 ~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 258 (439)
.+.... ++...|.. ..+. ...+..++.+.++++++++ +..+ ..+.+++|+++......
T Consensus 152 ~l~~~~------~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~-------~~~~~~~~~~~~~~~~~ 209 (381)
T PRK03633 152 KVSTEL------MSVLPWVT-GLVL-AAILPLLFTRILNQQAENH-------DSTS-------IWPMLKLRQARLGVNGC 209 (381)
T ss_pred cccccc------cchHHHHH-HHHH-HHHHHHHHhcccCCCCCCC-------CCCC-------HHHHHHhcchHHHHHHH
Confidence 765421 11212221 1111 1122222222222111110 0011 12345677766543322
Q ss_pred HHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccC
Q 013645 259 AYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV 338 (439)
Q Consensus 259 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~ 338 (439)
+..+.......+.+|.+..+++.+.+..+.+.....++.++++++.|++.||+++|+. +..+.....++... . ..
T Consensus 210 ~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~-l~~~~~~~~~~~~~--~-~~- 284 (381)
T PRK03633 210 IISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLV-LRVQVFVVILGSIA--M-LS- 284 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHH-HHHHHHHHHHHHHH--H-hh-
Confidence 3333322222233444444445556677887788889999999999999999998763 34455554443321 1 11
Q ss_pred CCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHH
Q 013645 339 TSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMV 413 (439)
Q Consensus 339 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~ 413 (439)
. .....+..++|++.....|...+...+..|+++ +.+.+.++...++|.++++.+.+. .++.+.+.+.+
T Consensus 285 ~------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~ 358 (381)
T PRK03633 285 Q------AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIA 358 (381)
T ss_pred h------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHH
Confidence 1 122334556677777778888888889887765 445566667777777777665543 35666666666
Q ss_pred HHHHHHHHH
Q 013645 414 VGICVALVG 422 (439)
Q Consensus 414 ~~~~~~~~~ 422 (439)
.+.+++.+.
T Consensus 359 ~~~l~~~~~ 367 (381)
T PRK03633 359 SVSFIYLLM 367 (381)
T ss_pred HHHHHHHHH
Confidence 665555443
No 18
>PRK12382 putative transporter; Provisional
Probab=99.94 E-value=9.7e-24 Score=209.47 Aligned_cols=365 Identities=15% Similarity=0.111 Sum_probs=229.3
Q ss_pred ccccCccccchhHHHHHHHHHHHHHHHhhhhhhHhh-hccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHH
Q 013645 18 LQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETT-VNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNAL 92 (439)
Q Consensus 18 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l 92 (439)
.|.|++++.++.++.+.++.++.+.......++.|. +.+|.+.... ..+.....+++++++.|+++||+|||+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l 84 (392)
T PRK12382 5 SQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSA 84 (392)
T ss_pred ccCcCCCcccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHH
Confidence 366777788888888888877777765555554443 3344344332 34556666778889999999999999999
Q ss_pred HHHhHHHHHHHHh----hh-----cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHH
Q 013645 93 ILGTTGYWLFVAA----NL-----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFW 163 (439)
Q Consensus 93 ~~g~~~~~~~~~~----~~-----~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~ 163 (439)
..+.+...+..+. .. .+++..+++.|+++|++.+..+++..+++.+.. |+++|++++|+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~r~~a~~~~~ 154 (392)
T PRK12382 85 LQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLV----------GPKHSGKVMSWNG 154 (392)
T ss_pred HHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----------CccccchhhhHHH
Confidence 9988765543321 11 247788889999999999998888778777776 7899999999999
Q ss_pred HHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHH
Q 013645 164 GMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSIT 243 (439)
Q Consensus 164 ~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (439)
...+.|..+|++++..+... .+|+.. +.+. .++..+...+.++.++.++++ + ++++.++..
T Consensus 155 ~~~~~g~~~g~~~~~~l~~~-----~g~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~---- 215 (392)
T PRK12382 155 MAMYGALAAGAPLGLLLHSH-----FGFAAL-ALTT---MVLPLLAWAFNGTVRKVPAHA--G----ERPSLWSVV---- 215 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhc-----cChHHH-HHHH---HHHHHHHHHHHHhccCCCCCc--c----cCchHHHHH----
Confidence 88899999999998877543 357652 2221 122222222223211111111 0 011122211
Q ss_pred HhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHH
Q 013645 244 TLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAI 323 (439)
Q Consensus 244 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~ 323 (439)
+.+..+.+... ..+........+.+.++.+. +.+..+.....++++.++++++.|++.||.++|+.+ ..+..
T Consensus 216 ~~~~~~~~~~~-----l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-~~~~~ 287 (392)
T PRK12382 216 GLIWKPGLGLA-----LQGVGFAVIGTFVSLYFASK--GWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVA-IVSLL 287 (392)
T ss_pred HHHHHhHHHHH-----HHHHHHhHHHHHHHHHHHhc--CCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeh-HHHHH
Confidence 22222222211 11111111112222223222 333455556677888899999999999999987744 45555
Q ss_pred HHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhh-
Q 013645 324 AQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP- 401 (439)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~- 401 (439)
+..+++. .....++ .....+..+++|++.+...+...+.+.+.+|+++ +++.|.++....+|..+++.+.+
T Consensus 288 ~~~~~~~--~~~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~ 360 (392)
T PRK12382 288 VETVGLL--LLWLAPT-----AWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGM 360 (392)
T ss_pred HHHHHHH--HHHHccc-----HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554433 2233322 2445667788899988888888888889887665 56788888888888777765543
Q ss_pred ---hhhHHHHHHHHHHHHHHHHHHHHHH
Q 013645 402 ---YISLQAMLIVMVVGICVALVGILFL 426 (439)
Q Consensus 402 ---~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (439)
..++...+...++..+++++..++.
T Consensus 361 l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 361 LATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 3467777777777777776655433
No 19
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.94 E-value=7e-24 Score=210.59 Aligned_cols=339 Identities=9% Similarity=-0.028 Sum_probs=214.8
Q ss_pred hhhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-hcchhhHHHHHHHH
Q 013645 46 AAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLY 120 (439)
Q Consensus 46 ~~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~i 120 (439)
+...+.|.+.+|.+.+.. ..+..+..+++++++.|++.||+|||+++..+..++++..+.. ..+++..++++|++
T Consensus 27 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l 106 (393)
T PRK09705 27 SVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALL 106 (393)
T ss_pred ccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHH
Confidence 344556666666555543 3556666788899999999999999999999999988877654 68899999999999
Q ss_pred hhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHH
Q 013645 121 LGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFL 200 (439)
Q Consensus 121 ~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~ 200 (439)
+|+|.+..++...+++.++. +++|++++|++.++...|..+|+.++..+..+. .+||..++ ++.
T Consensus 107 ~Gig~~~~~~~~~~~~~~~~-----------~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~----~~w~~~~~-~~~ 170 (393)
T PRK09705 107 GGVGIGIIQAVMPSVIKRRF-----------QQRTPLVMGLWSAALMGGGGLGAAITPWLVQHS----ETWYQTLA-WWA 170 (393)
T ss_pred HHhHHHHHhhhhhHHHHHHc-----------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCHHHHHH-HHH
Confidence 99999999888877776663 478999999999988999999998887776542 25877433 233
Q ss_pred HHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhccc
Q 013645 201 GVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPA 280 (439)
Q Consensus 201 ~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~ 280 (439)
+..++.....+..++++++++++ + + .+ ..+.+++|+.+.+....++..........+.+.++.+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~--~----~-~~-------~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g 236 (393)
T PRK09705 171 LPAVVALFAWWWQSAREVASSHK--T----T-TT-------PVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIG 236 (393)
T ss_pred HHHHHHHHHHHHHhcCCCccccC--C----C-cC-------CcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33333332222222211111100 0 0 00 123456777766554333333222222345555554456
Q ss_pred ccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhh
Q 013645 281 LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG 360 (439)
Q Consensus 281 ~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 360 (439)
.+.++.|.....++++.++++++.|++.||.++|+.+ ..+..+..++.. .+.+.+... ... ...+.|++.+
T Consensus 237 ~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~-~~~~~l~~~~~~--~~~~~~~~~----~~~--~~~l~g~g~g 307 (393)
T PRK09705 237 ASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLL-MLALVLQLVGFC--GFIWLPLQL----PVL--WAMVCGLGLG 307 (393)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHH-HHHHHHHHHHHH--HHHHccchH----HHH--HHHHHHHhcc
Confidence 6667788888899999999999999999999987643 445544444332 122222211 222 2334577776
Q ss_pred hhhhhHHHHHHhhccC-Cc-hhhHHHHHHHHHHHHHHHHHHh-----hhhhHHHHHHHHHHHHHHHHHHH
Q 013645 361 VLNTQLSALLGILFKH-DT-EGAFAQLKVWQCASIAVVFFIG-----PYISLQAMLIVMVVGICVALVGI 423 (439)
Q Consensus 361 ~~~~~~~a~~~~~~p~-~~-~~a~s~~~~~~~~g~~i~~~i~-----~~~~~~~~~~~~~~~~~~~~~~~ 423 (439)
...+...+...+.+++ +. +++++..+....++..+++.+. ...++...+++.++.++++.+..
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK09705 308 GAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIIT 377 (393)
T ss_pred chHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 7777777777777753 33 4467777776666655554443 33345566666555555554444
No 20
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.94 E-value=4.3e-24 Score=214.29 Aligned_cols=351 Identities=9% Similarity=0.005 Sum_probs=205.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHH
Q 013645 29 DVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA 104 (439)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 104 (439)
+.....++.+.....+.....+.+.+.++.+.... ..+.....+.+++++.|+++||+|||+++..+.+..++..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~ 98 (426)
T PRK12307 19 ALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTG 98 (426)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 34444344444333344444555555444444332 34556667778899999999999999999999998877665
Q ss_pred h-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcC
Q 013645 105 A-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (439)
Q Consensus 105 ~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~ 183 (439)
. ...+++..++++|++.|+|.+..++....+++|+. |+++|+++.|++..+.++|.++++.+...+...
T Consensus 99 ~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~ 168 (426)
T PRK12307 99 LSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESW----------PKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA 168 (426)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhC----------CHhHhhHhhhHHHHHHhHHHHHHHHHHHHHccc
Confidence 4 36788999999999999999999998888888886 888999999999999999999998877666432
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHH-hh
Q 013645 184 DKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAY-SG 262 (439)
Q Consensus 184 ~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g 262 (439)
.+||..+++ .....++........||+++.++++.++++.+.....+....+.++.+++|+++.....+.. ..
T Consensus 169 -----~~w~~~f~i-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (426)
T PRK12307 169 -----YGWRAAFFV-GLLPVLLVIYIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFS 242 (426)
T ss_pred -----CCHHHHHHH-HHHHHHHHHHHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHH
Confidence 368875432 22111111111111233211111100000000000111111234456777776543322111 11
Q ss_pred HH-HH-HHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCC
Q 013645 263 LQ-QA-FVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTS 340 (439)
Q Consensus 263 ~~-~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~ 340 (439)
.. .. ....++|.++.+.+.+.+..+.+....+++.++++++.|++.||++||+. +..+.++..+.... + ...++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~~-~-~~~~~~ 319 (426)
T PRK12307 243 IFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKT-FSIGLLMSFLFIFP-L-FRIPQD 319 (426)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHH-H-HHHccc
Confidence 11 11 12234554444445555667777788899999999999999999998864 34555444433221 1 122221
Q ss_pred CccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhh
Q 013645 341 GVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP 401 (439)
Q Consensus 341 ~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~ 401 (439)
. ......+.+..+++.....+..+.++.|.+|++. +.+.|+.+....+|..+++.+.+
T Consensus 320 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g 378 (426)
T PRK12307 320 N---YLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAAT 378 (426)
T ss_pred c---HHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHH
Confidence 1 1211122222222233334566778899999875 45778777777777777766554
No 21
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.94 E-value=1.9e-23 Score=206.67 Aligned_cols=358 Identities=12% Similarity=0.028 Sum_probs=216.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCch----HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHH
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~----~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~ 103 (439)
+.++.+..+.+.............|.+.+|.+.+. ...+.....+.+++++.|++.||+|||+++..+.++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 45556666666665555555555555555544433 23566677788899999999999999999999998877765
Q ss_pred Hh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhc
Q 013645 104 AA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (439)
Q Consensus 104 ~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~ 182 (439)
+. ...++++.+++.|++.|++.+...+....++.++. |+++|++++|++.....+|..+|++++..+..
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 152 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKII----------KPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ 152 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhC----------ChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence 54 46789999999999999999988887777777775 77889999999999999999999998887754
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHH-HHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHh
Q 013645 183 DDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYS 261 (439)
Q Consensus 183 ~~~~~~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 261 (439)
. .+||+. |.+..++.++..+. ..++||++++++. +.++. .+.+++++.+......+..
T Consensus 153 ~-----~gwr~~-f~~~~~~~~~~~~~~~~~lp~~~~~~~~-----------~~~~~----~~~~~~~~~~~~~~~~~~~ 211 (382)
T PRK10091 153 E-----FSWRYT-FLLIAVFNIAVLASIYFWVPDIRDEAKG-----------GLREQ----FHFLRSPAPWLIFAATMFG 211 (382)
T ss_pred h-----ccHHHH-HHHHHHHHHHHHHHHHHhCCCCCccccc-----------CHHHH----HHHhcChHHHHHHHHHHHH
Confidence 3 358875 44444444433332 3446654321110 01111 2346777776554332222
Q ss_pred hHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCC
Q 013645 262 GLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTS 340 (439)
Q Consensus 262 g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~ 340 (439)
......+.+++++++.+ .+.+.++.+++....+++.++++++.|++.||+++|+.+ ..+..+.+++... +....++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~-~~~~~~~~i~~~~-~~~~~~~- 288 (382)
T PRK10091 212 NAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIA-AVTDFIIVLALLM-LFFFGGM- 288 (382)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHH-HHHHHHHHHHHHH-HHHHHhh-
Confidence 11111122233333322 355666788888899999999999999999999987643 4555544444321 1112222
Q ss_pred CccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHH-----hhhhhHHHHHHHHHHH
Q 013645 341 GVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFI-----GPYISLQAMLIVMVVG 415 (439)
Q Consensus 341 ~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i-----~~~~~~~~~~~~~~~~ 415 (439)
.....++.++.+++.....+.......+..++++..+.+..+....+|.++++.+ +...++...+...+++
T Consensus 289 ----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~ 364 (382)
T PRK10091 289 ----KTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALL 364 (382)
T ss_pred ----HHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHH
Confidence 1333444445566554444444443444333333222222334445555555433 3345666666666554
Q ss_pred HHHHHHHH
Q 013645 416 ICVALVGI 423 (439)
Q Consensus 416 ~~~~~~~~ 423 (439)
.+++....
T Consensus 365 ~~~~~~~~ 372 (382)
T PRK10091 365 SFAAMSSL 372 (382)
T ss_pred HHHHHHHH
Confidence 44444433
No 22
>PRK09952 shikimate transporter; Provisional
Probab=99.94 E-value=1.3e-23 Score=211.60 Aligned_cols=378 Identities=13% Similarity=0.068 Sum_probs=213.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhh-hccC------CCCchHH----HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHh
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLETT-VNTE------GNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGT 96 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~-l~~~------~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~ 96 (439)
+.++...+++++.+..+.....+.+. +.++ ...+... .++-+....+++++.|+++||+|||+++..+.
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~ 101 (438)
T PRK09952 22 RAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTV 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHH
Confidence 44555555666655555444433332 2221 1222221 12334445678889999999999999999999
Q ss_pred HHHHHHHHhh-hcchhh--------HHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHH
Q 013645 97 TGYWLFVAAN-LFPSWY--------TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFA 167 (439)
Q Consensus 97 ~~~~~~~~~~-~~~~~~--------~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~ 167 (439)
+++++..+.. +.+++. .+++.|+++|++.|..+++..++++|+. |+++||+..+....+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~----------p~~~rg~~~~~~~~g~~ 171 (438)
T PRK09952 102 WMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESA----------PKNKKAFYSSGVQVGYG 171 (438)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhC----------CCCCCcHHHHHHHHHHH
Confidence 9988876653 667765 5778999999999999999889999887 88999999999888888
Q ss_pred HhhhhhhHHHHHhhcCCC---CCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHH
Q 013645 168 SHQFVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITT 244 (439)
Q Consensus 168 ~G~~iG~~i~~~l~~~~~---~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (439)
+|..+|..+...+..... ....+||..+ ++..+..++...+...+||+++..+++.+.++.++..+. ...
T Consensus 172 ~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f-~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~~~~~~~------~~~ 244 (438)
T PRK09952 172 VGLLLSTGLVSLISMMTTDEQFLSWGWRIPF-LFSIVLVLIALWVRNGMEESAEFEQQQHEQAAAKKRIPV------IEA 244 (438)
T ss_pred HHHHHHHHHHHHHHHhCCHHHhhccChHHHH-HHHHHHHHHHHHHHHhCCCChhHHHHHhhcccccccCCH------HHH
Confidence 888888766655442211 0135798743 333333322221112233322110000000000000011 112
Q ss_pred hhccchhHHHHHHHHHhhHHHHH-HHhhcchhhh-cccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHH
Q 013645 245 LLADVRMLLIIPLFAYSGLQQAF-VWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGA 322 (439)
Q Consensus 245 ~~~~~~~~~l~~~~~~~g~~~~~-~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~ 322 (439)
..++|+.+..............+ ..++.+.++. ..+++.+.........++...++.++.|+++||++||+.+ ..+.
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~-~~~~ 323 (438)
T PRK09952 245 LLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVY-ITGA 323 (438)
T ss_pred HHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-HHHH
Confidence 44666665544322211111111 1233333322 1233333333344456777788889999999999988744 3444
Q ss_pred HHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHH-HHHHHHHHHHHHHHHh
Q 013645 323 IAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQ-LKVWQCASIAVVFFIG 400 (439)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~-~~~~~~~g~~i~~~i~ 400 (439)
++..++..........+.. .....+..++.+++.+...+..++++.|.+|.+.+ .+.++ ++....++..+++.+.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~ 400 (438)
T PRK09952 324 LIGTLSAFPFFMALEAQSI---FWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIA 400 (438)
T ss_pred HHHHHHHHHHHHHHHcCCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHH
Confidence 4433322111111111111 13334455666788888888889999999998764 35554 4554545655555443
Q ss_pred hh------hhHHHHHHHHHHHHHHHHHHHHHH
Q 013645 401 PY------ISLQAMLIVMVVGICVALVGILFL 426 (439)
Q Consensus 401 ~~------~~~~~~~~~~~~~~~~~~~~~~~~ 426 (439)
+. .++...+...++..+++.+..+.+
T Consensus 401 g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 401 AALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 22 235566666666677777766544
No 23
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.94 E-value=2.3e-23 Score=205.66 Aligned_cols=343 Identities=14% Similarity=0.050 Sum_probs=217.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHH
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~ 103 (439)
+.++.+++..+....+........|.+.++.+.... ..+.......+++++.|++.||+|||+++..+.++..+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 84 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSS 84 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHH
Confidence 334444333333333434444445555544444332 3445555667888999999999999999999988776655
Q ss_pred Hh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhc
Q 013645 104 AA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (439)
Q Consensus 104 ~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~ 182 (439)
.. ...++++.+++.|++.|++.+...+...+++.|+. |+++|++++|+......+|..+|+.++..+..
T Consensus 85 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 154 (385)
T TIGR00710 85 LGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIY----------PGEELSRIYSILMPVLALAPAVAPLLGGYILV 154 (385)
T ss_pred HHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhc----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54 35688888889999999999999999888888887 78899999999999999999999999887765
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHHH-HhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHh
Q 013645 183 DDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYS 261 (439)
Q Consensus 183 ~~~~~~~~w~~~~~~~~~~~~~l~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 261 (439)
+ .+||.. |.+..++.++..+.. ++.||++++++++ +. ++..++.++.+++|+++.........
T Consensus 155 ~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (385)
T TIGR00710 155 W-----LSWHAI-FAFLSLAGILLSALIFFILPETLPYEARI------QI----STYFETFLLLLKSKMFWGYALIYGAS 218 (385)
T ss_pred H-----cCHHHH-HHHHHHHHHHHHHHHHHhCCCCCCCcccC------CH----HHHHHHHHHHHcCchhHHHHHHHHHH
Confidence 3 358764 333344444433333 3455543221110 00 11122345667888887654432221
Q ss_pred hHHHHHHHhhcchhhh-cccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHh-hccCC
Q 013645 262 GLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVT 339 (439)
Q Consensus 262 g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~-~~~~~ 339 (439)
...........|..+. ..+.+.+..+.+....+++.++++++.|++.||+++|+.+ ..+..+..++...... .....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 297 (385)
T TIGR00710 219 FGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLL-RMGLILFAVSAVLLEITAILGL 297 (385)
T ss_pred HHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH-HHHHHHHHHHHHHHHHHHHhcc
Confidence 1111111122333332 2345666788888888999999999999999999987643 3444444333221111 11111
Q ss_pred CCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHH-HHHHHHHHh
Q 013645 340 SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCA-SIAVVFFIG 400 (439)
Q Consensus 340 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~-g~~i~~~i~ 400 (439)
.. ........++.|++.+...+...+...|..|++++.+.+.++..+.. |...++.++
T Consensus 298 ~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 298 GS---WAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred ch---HHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 23445567778898888888888888898887777778877776654 445555444
No 24
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.94 E-value=1e-23 Score=213.31 Aligned_cols=354 Identities=9% Similarity=-0.050 Sum_probs=206.3
Q ss_pred hhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-h----cchhhHHHHHHH
Q 013645 49 NLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L----FPSWYTMVPASL 119 (439)
Q Consensus 49 ~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~----~~~~~~li~~r~ 119 (439)
...|.+.++ +.+.. ..+.....+++++++.|+++||+|||+++..+.++.++..... . ..++..+++.|+
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLF 128 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHH
Confidence 344555544 44433 2455666778889999999999999999999998776655432 2 236777788999
Q ss_pred HhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhh-hhhHHHHHhhcCCCCCCCCcchHHHHH
Q 013645 120 YLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQF-VGNLITLAVLKDDKGGSTSGTTLLFIV 198 (439)
Q Consensus 120 i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~-iG~~i~~~l~~~~~~~~~~w~~~~~~~ 198 (439)
+.|++.+..++...+.+.++. |+++||+++|++..+.++|.. .+++++..+... .+||..+ ++
T Consensus 129 l~gi~~g~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-----~gw~~~f-~i 192 (452)
T PRK11273 129 LCGWFQGMGWPPCGRTMVHWW----------SQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF-----NDWHAAL-YM 192 (452)
T ss_pred HHHHHHhccchHHHHHHHHhC----------ChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh-----ccHHHHH-HH
Confidence 999999988877667777765 788999999999888888864 455543333221 2588754 34
Q ss_pred HHHHHHHH-HHHHHhccCCCcc---ccccc---c--cc---chhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHH
Q 013645 199 FLGVITLG-TILMCFLRKEEDK---GEKET---A--DA---SVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQA 266 (439)
Q Consensus 199 ~~~~~~l~-~~~~~~l~~~~~~---~~~~~---~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 266 (439)
.+++.++. .+..+++||+++. +++++ + +. +..++.+.++.+. ...+|+|+++......++......
T Consensus 193 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~ 270 (452)
T PRK11273 193 PAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFM--QYVLPNKLLWYIAIANVFVYLLRY 270 (452)
T ss_pred HHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHH--HHHHcChHHHHHHHHHHHHHHHHH
Confidence 44444443 3344567764332 11100 0 00 0000111222111 235688888876655443333222
Q ss_pred HHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCC--CcceehhhHHHHHHHHHHHHHhhccCCCCcc
Q 013645 267 FVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLP--SITFIVSGGAIAQVVVFLWILINYSVTSGVL 343 (439)
Q Consensus 267 ~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~--~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 343 (439)
....++|.++.+ .+++.+..+.....+.++.+++.++.|+++||++ ||.........+..+... .+...+..+
T Consensus 271 ~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~--~~~~~~~~~-- 346 (452)
T PRK11273 271 GILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATI--VYWLNPAGN-- 346 (452)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHH--HHHHhcccC--
Confidence 233456655543 3566667777777888999999999999999984 333221111222222221 111211111
Q ss_pred chHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHH-HHHHHh----hhhhHHHHHHHHHHHHH
Q 013645 344 GTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIA-VVFFIG----PYISLQAMLIVMVVGIC 417 (439)
Q Consensus 344 ~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~-i~~~i~----~~~~~~~~~~~~~~~~~ 417 (439)
.....++.++.|...........++..|.+|++. +++.|..+....+|.. +++.+. ...++...++++.+.++
T Consensus 347 -~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~ 425 (452)
T PRK11273 347 -PTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSI 425 (452)
T ss_pred -hHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHH
Confidence 1223334444444332223334556778998765 5678888777666643 344433 23457777777777767
Q ss_pred HHHHHHHHH
Q 013645 418 VALVGILFL 426 (439)
Q Consensus 418 ~~~~~~~~~ 426 (439)
++++.....
T Consensus 426 ~~~~~~~~~ 434 (452)
T PRK11273 426 LAVILLIVV 434 (452)
T ss_pred HHHHHHHHH
Confidence 666655533
No 25
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.94 E-value=2.2e-23 Score=204.74 Aligned_cols=322 Identities=11% Similarity=0.055 Sum_probs=198.2
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhhh-cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhh
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANL-FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~~-~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~ 143 (439)
.+.++..+++++++.|+++||+|||+++..+............ .+++..+++.|+++|+|.+... ...+.++++.
T Consensus 32 ~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~~~-~~~~~~~~~~--- 107 (368)
T TIGR00903 32 AITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPFLL-NAFAPAASQI--- 107 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHHHH-HHHHHHHHHc---
Confidence 5566777889999999999999999887655544333322223 3689999999999999998644 4445556665
Q ss_pred hhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHH-HHHhccCCCccccc
Q 013645 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI-LMCFLRKEEDKGEK 222 (439)
Q Consensus 144 a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~-~~~~l~~~~~~~~~ 222 (439)
|+++|++++++...+..+|.+++++++..+..+ .+||.. |.+.+++.++..+ ..+++||+++.+++
T Consensus 108 -------~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~-----~gWr~~-f~~~~~l~~~~~~~~~~~lp~~p~~~~~ 174 (368)
T TIGR00903 108 -------REERRDLVISLLSFAMYLGIIFALAAGLKIYTA-----GGLQLL-IIPIAAVAAAGIILVLAALPALPFQAAE 174 (368)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cchHHH-HHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 889999999999999999999999998888653 369985 4344555544433 34567775432211
Q ss_pred cccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHH
Q 013645 223 ETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSL 302 (439)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~ 302 (439)
+ .+ . + +..++++++++||+++.+....++.........++.|+++.+.+++.+ .+....+..+...++
T Consensus 175 ~---~~--~-~---~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g-- 242 (368)
T TIGR00903 175 G---FG--F-K---DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG-- 242 (368)
T ss_pred C---cc--h-H---HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH--
Confidence 1 00 0 0 111245578899999887665444333332334577776654445443 444444444444444
Q ss_pred hhhhhhcCCCCc---ceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-
Q 013645 303 AAGRLTTGLPSI---TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT- 378 (439)
Q Consensus 303 ~~G~l~d~~~~r---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~- 378 (439)
.++++||..|| +.......+..++... ...+..+. ....+...+.+++.....+..+++.+|.+|++.
T Consensus 243 -~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~--~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~r 314 (368)
T TIGR00903 243 -VAVIPDRVARAGLRSIYIRAAALLIAAFFL--ALAFELNR-----LALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELH 314 (368)
T ss_pred -HHHhhHHhhhhhhHHHHHHHHHHHHHHHHH--HHHHcccc-----HHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhc
Confidence 46777776543 2222222222232221 22333221 233444455566666666778899999999875
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhh-hh-hHHHHHHHHHHHHHHHHHHH
Q 013645 379 EGAFAQLKVWQCASIAVVFFIGP-YI-SLQAMLIVMVVGICVALVGI 423 (439)
Q Consensus 379 ~~a~s~~~~~~~~g~~i~~~i~~-~~-~~~~~~~~~~~~~~~~~~~~ 423 (439)
+++.|..+....++..+++.+.+ .. +....+..+++..+++++..
T Consensus 315 gt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 315 GKAAGAIGFTSRAISVALALAAMLFISSAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred CcccchhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 55788888877777655543332 22 55566766776666666654
No 26
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.94 E-value=3.7e-24 Score=211.05 Aligned_cols=360 Identities=12% Similarity=0.027 Sum_probs=222.0
Q ss_pred hhhhhHhhhccCCCCch----HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHH
Q 013645 46 AAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLY 120 (439)
Q Consensus 46 ~~~~~~~~l~~~~~~g~----~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i 120 (439)
......|.+.++.+... ...++......+++++.|++.||+|||+++..+.+++++.... ...++++.+++.|++
T Consensus 12 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 91 (399)
T TIGR00893 12 NLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVL 91 (399)
T ss_pred hhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 33344444444433332 2345555666788899999999999999999998887766554 356789999999999
Q ss_pred hhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHH
Q 013645 121 LGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFL 200 (439)
Q Consensus 121 ~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~ 200 (439)
.|++.+..+++..++++|+. |+++|++++|+.....++|..+|+.++..+... .+||+. |...+
T Consensus 92 ~g~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~~~~~~-~~~~~ 155 (399)
T TIGR00893 92 LGAAEAPFFPGIILIVASWF----------PASERATAVSIFNSAQGLGGIIGGPLVGWILIH-----FSWQWA-FIIEG 155 (399)
T ss_pred HHHHHHhhhhHHHHHHHHhC----------CHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh-----CCchHH-HHHHH
Confidence 99999999999999999887 788999999999999999999999998877653 258774 43444
Q ss_pred HHHHHHHHHH-HhccCCCccccc---ccccc--ch-----hhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHH
Q 013645 201 GVITLGTILM-CFLRKEEDKGEK---ETADA--SV-----NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW 269 (439)
Q Consensus 201 ~~~~l~~~~~-~~l~~~~~~~~~---~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~ 269 (439)
++.++..+.. ++.||++++++. +.++. +. +.+++.++...+.++.+++|+++......+..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (399)
T TIGR00893 156 VLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFL 235 (399)
T ss_pred HHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHH
Confidence 4444333333 345554332110 00000 00 0000000011234466788888776654444333333333
Q ss_pred hhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHH---HHHHHhhccCCCCccch
Q 013645 270 AEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVV---FLWILINYSVTSGVLGT 345 (439)
Q Consensus 270 ~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~ 345 (439)
.+++.++.+ .+.+..+.+......+++.+++.++.|++.||+++|+............+ .............
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 311 (399)
T TIGR00893 236 TWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNI---- 311 (399)
T ss_pred HHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchh----
Confidence 344444322 24455567888888899999999999999999997752211111111111 1111111111111
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh----hh-HHHHHHHHHHHHHHH
Q 013645 346 LYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----IS-LQAMLIVMVVGICVA 419 (439)
Q Consensus 346 ~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~----~~-~~~~~~~~~~~~~~~ 419 (439)
....+...+.+.......+..++++.|.+|++. +.+.|..+...++|..+++.+.+. .+ +...+++.++..+++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~ 391 (399)
T TIGR00893 312 PYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIG 391 (399)
T ss_pred HHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHH
Confidence 222222333333333368889999999999875 457888888888888877655543 23 677777777777776
Q ss_pred HHHHHH
Q 013645 420 LVGILF 425 (439)
Q Consensus 420 ~~~~~~ 425 (439)
.+.++.
T Consensus 392 ~~~~~~ 397 (399)
T TIGR00893 392 ALSYLL 397 (399)
T ss_pred HHHHHH
Confidence 665543
No 27
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=3.5e-24 Score=203.50 Aligned_cols=370 Identities=9% Similarity=0.040 Sum_probs=240.9
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhccCCCCch----HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hh
Q 013645 33 LSCAFLLIFLAYGAAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NL 107 (439)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~----~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~ 107 (439)
+.++...++..+......+|.+.++.++.. ...+.++..|+++.++.|.++||.++|+.+..|+++-++..+. .+
T Consensus 34 ~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gf 113 (448)
T COG2271 34 IFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGF 113 (448)
T ss_pred HHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhh
Confidence 333444444444454555666665543332 1357788899999999999999999999999999988776665 46
Q ss_pred cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHH--HHhhcCCC
Q 013645 108 FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT--LAVLKDDK 185 (439)
Q Consensus 108 ~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~--~~l~~~~~ 185 (439)
.++...+.+.-+++|..+|.-||+....+++|. +++|||+..+++..+.++|..+-+++. +.+..+
T Consensus 114 s~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wf----------sr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~-- 181 (448)
T COG2271 114 SPSLFLFAVLWVLNGWFQGMGWPPCARTITHWF----------SRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH-- 181 (448)
T ss_pred hhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHc----------CccccCceEEEehhhhhcccchHHHHHHHHHHHhc--
Confidence 789998988999999999999999999999987 889999999999999999998888777 555433
Q ss_pred CCCCCcchHHHHHHHHHHH-HHHHHHHhccCCCcc---cc-----cccccc--chhhh--hhHHHHHHHHHHhhccchhH
Q 013645 186 GGSTSGTTLLFIVFLGVIT-LGTILMCFLRKEEDK---GE-----KETADA--SVNFY--SYLVSLSKSITTLLADVRML 252 (439)
Q Consensus 186 ~~~~~w~~~~~~~~~~~~~-l~~~~~~~l~~~~~~---~~-----~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~ 252 (439)
.+||..++. .+++++ ++++..+.+|+++++ ++ +|..+. +++.+ -+.++.+. +.+++||.+|
T Consensus 182 ---~~w~~~f~~-pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~--~YVL~Nk~iW 255 (448)
T COG2271 182 ---GGWRAAFYF-PGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFV--KYVLKNKLIW 255 (448)
T ss_pred ---cchhHHHHH-HHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHH--HHHHcChHHH
Confidence 258886554 455444 455555667765432 11 111111 11111 22334333 3578999999
Q ss_pred HHHHHHHHhhHHHHHHHhhcchhhh-cccccccchHHHHHHHHHHHHHHHHhhhhhhcCC--CCcceehhhHHHHHHHHH
Q 013645 253 LIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL--PSITFIVSGGAIAQVVVF 329 (439)
Q Consensus 253 ~l~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~--~~r~~~~~~g~~~~~~~~ 329 (439)
++....++.-+.-.-+..|-|.++. .++++..+.......+-.+.+.|+++.|++|||+ |||.+..++.++...+++
T Consensus 256 ~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~ 335 (448)
T COG2271 256 LLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASL 335 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 9887544333322111122222222 3567777778888889999999999999999997 466544333333333332
Q ss_pred HHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHH-HHHHH-----HHHhhh
Q 013645 330 LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCA-SIAVV-----FFIGPY 402 (439)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~-g~~i~-----~~i~~~ 402 (439)
. .+...++.+ +.+..++.+..|+....-+..+-....|..|++. ++|.|...++..+ |++.+ ++.+.
T Consensus 336 ~--~~w~~~~~~---~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~- 409 (448)
T COG2271 336 V--LYWLAPNGS---YLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT- 409 (448)
T ss_pred H--HHHcCCCcc---HHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec-
Confidence 2 222233322 3555666777777665555555566778888876 4577888888877 66654 22233
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q 013645 403 ISLQAMLIVMVVGICVALVGILFL 426 (439)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~ 426 (439)
.++...++++.+..+++.+.++..
T Consensus 410 ~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 410 WGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHH
Confidence 466666766666666666655433
No 28
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.94 E-value=2.2e-23 Score=207.33 Aligned_cols=360 Identities=14% Similarity=0.095 Sum_probs=221.4
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhhhHhh-hccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHH
Q 013645 24 KNYTRDVHILSCAFLLIFLAYGAAQNLETT-VNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTG 98 (439)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~ 98 (439)
.|.++++..+.+..+....+......+.+. +.++.+.+.. ..+..+..+++++++.|+++||+|||+++..+.+.
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~ 90 (399)
T PRK05122 11 LRLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCG 90 (399)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHH
Confidence 456677777777777777776555544443 3444344433 34555667778899999999999999999999887
Q ss_pred HHHHHHh----hhc-----chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHh
Q 013645 99 YWLFVAA----NLF-----PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASH 169 (439)
Q Consensus 99 ~~~~~~~----~~~-----~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G 169 (439)
+++.... ... .++..+++.|+++|++.+...++..+++.+.. |+++|++++|+.......|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g 160 (399)
T PRK05122 91 CALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRV----------GALHTGRVISWNGIATYGA 160 (399)
T ss_pred HHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhc----------ChhhhccchhhhhhhhhHH
Confidence 6553322 112 24567888999999999999888878777776 7899999999998888999
Q ss_pred hhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccC-CCccccccccccchhhhhhHHHHHHHHHHhhcc
Q 013645 170 QFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK-EEDKGEKETADASVNFYSYLVSLSKSITTLLAD 248 (439)
Q Consensus 170 ~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (439)
.++|+.++..+... .+|+.. +.+..++ ..+..++.++ |+++++++ ++.+.++. ++
T Consensus 161 ~~~g~~l~~~l~~~-----~g~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-------~~- 216 (399)
T PRK05122 161 LAIGAPLGVLLYHW-----GGLAGL-GLLIMLL---ALLGLLLARPRPAVPPVKG-------ERLPFRRV-------LG- 216 (399)
T ss_pred HHHHHHHHHHHHHc-----ccHHHH-HHHHHHH---HHHHHHHHhcCCCCCCCCc-------cchhHHHH-------HH-
Confidence 99999998887653 357663 2222222 2222222332 22111110 01111111 11
Q ss_pred chhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHH
Q 013645 249 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVV 328 (439)
Q Consensus 249 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~ 328 (439)
+.+..................+.+.++.+.+. +..+.....++++.++++++.|++.||+++|+. ...+..+..++
T Consensus 217 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-~~~~~~~~~~~ 292 (399)
T PRK05122 217 -RVWPYGMGLALASIGFGTIATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRV-AIVSLLVEILG 292 (399)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHH
Confidence 11111111111111111111122222222222 344555667888899999999999999998764 34454444444
Q ss_pred HHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhh----hh
Q 013645 329 FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP----YI 403 (439)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~----~~ 403 (439)
.. .....++ .....+..+++|++.+...+...+...+..|+++ +++++.++....+|..+++.+.+ ..
T Consensus 293 ~~--~~~~~~~-----~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 365 (399)
T PRK05122 293 LL--LLWLAPS-----PWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF 365 (399)
T ss_pred HH--HHHHhcc-----HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 32 2223322 2445567788999988888888888888888765 45788888877777665543332 33
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 404 SLQAMLIVMVVGICVALVGILFLTI 428 (439)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (439)
++...++..++..+++.+..+.+.+
T Consensus 366 g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 366 GYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 6777777777777777766655444
No 29
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.94 E-value=4.1e-23 Score=211.17 Aligned_cols=345 Identities=12% Similarity=0.051 Sum_probs=218.6
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhccCCCCch----HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hh
Q 013645 33 LSCAFLLIFLAYGAAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NL 107 (439)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~----~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~ 107 (439)
++++.++............|++.+|.+... +..+.....++.++++.|+++||+|||+++..+.+.+.+..+. ..
T Consensus 11 ~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~ 90 (495)
T PRK14995 11 IVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAF 90 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333334455566655544332 2344555567788899999999999999999999988776554 46
Q ss_pred cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCC
Q 013645 108 FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG 187 (439)
Q Consensus 108 ~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~ 187 (439)
.+|++.++++|+++|+|.+...+.....+.+.. .|+++|++++|++.....+|..+||.+++.+..+
T Consensus 91 a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~---------~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~---- 157 (495)
T PRK14995 91 SPTASWLIATRALLAIGAAMIVPATLAGIRATF---------TEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH---- 157 (495)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----
Confidence 789999999999999999998887666665553 2678999999999999999999999999988754
Q ss_pred CCCcchHHHHHHHHHHHHHHHH-HHhccCCCccccccccccch-----------------hh-h-hh-------------
Q 013645 188 STSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASV-----------------NF-Y-SY------------- 234 (439)
Q Consensus 188 ~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~~~~~~~~-----------------~~-~-~~------------- 234 (439)
.+||+.+++ ...+.++..++ ..++|+++++++++.+.... .. . ..
T Consensus 158 -~gwr~~f~i-~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (495)
T PRK14995 158 -FYWGSVFLI-NVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALL 235 (495)
T ss_pred -CChHHHHHH-HHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHH
Confidence 369886443 34444444333 34566543221111000000 00 0 00
Q ss_pred ----HHHHHH-----HHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhh-cccccccchHHHHHHHHHHHHHHHHhh
Q 013645 235 ----LVSLSK-----SITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAA 304 (439)
Q Consensus 235 ----~~~~~~-----~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~ig~~~~ 304 (439)
...+.+ -..+.+|+|.+.......+..+....-....+|.++. .++.+..+.|.....++++..+++++.
T Consensus 236 l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~ 315 (495)
T PRK14995 236 LGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIA 315 (495)
T ss_pred HHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0024567777655444333333222111123333332 245667788999899999999999999
Q ss_pred hhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHH
Q 013645 305 GRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFA 383 (439)
Q Consensus 305 G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s 383 (439)
|++.||+++|+ ++..+.++..+++..+. ....+.+ ........++.|++.+...+.......+..|++++ .+.+
T Consensus 316 g~l~~r~g~~~-~~~~g~~~~~~~~~~l~-~~~~~~~---~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~ 390 (495)
T PRK14995 316 GILVSRLGLRL-VATGGMALSALSFYGLA-MTDFSTQ---QWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGA 390 (495)
T ss_pred HHHHHHcCchH-HHHHHHHHHHHHHHHHH-HhcCCCc---hHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHH
Confidence 99999999876 44556665554433211 1222222 23445677888999998888888888888887754 4677
Q ss_pred HHHHHHHHHHHHHH
Q 013645 384 QLKVWQCASIAVVF 397 (439)
Q Consensus 384 ~~~~~~~~g~~i~~ 397 (439)
.+++.+++|.++|.
T Consensus 391 ~~~~~~~lG~~~G~ 404 (495)
T PRK14995 391 IETMAYELGAGLGI 404 (495)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888887776553
No 30
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.93 E-value=1.3e-23 Score=220.38 Aligned_cols=160 Identities=11% Similarity=0.022 Sum_probs=118.9
Q ss_pred hhhhHhhhccCCCCch----HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHh
Q 013645 47 AQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYL 121 (439)
Q Consensus 47 ~~~~~~~l~~~~~~g~----~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~ 121 (439)
...+.|.+.++.+... ...++.+.+..++++++|+++||+|||++++++.++++++.+. .+.+++..++++|++.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~ 265 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLS 265 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3345555544433332 2356677788899999999999999999999998887776554 4568899999999999
Q ss_pred hhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCC--------CCCCCcch
Q 013645 122 GFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--------GGSTSGTT 193 (439)
Q Consensus 122 Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~--------~~~~~w~~ 193 (439)
|+|.|...+...++++++. |+++||+.+++..++..+|.++++.++..+....+ ....+||+
T Consensus 266 G~g~g~~~p~~~~~isE~~----------p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~ 335 (742)
T TIGR01299 266 GFGIGGAIPIVFSYFAEFL----------AQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRV 335 (742)
T ss_pred HHHHHHHHHHHHHHHHHHC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHH
Confidence 9999999999999999997 88999999999999999999999887766543211 01236877
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCC
Q 013645 194 LLFIVFLGVITLGTILMCFLRKEE 217 (439)
Q Consensus 194 ~~~~~~~~~~~l~~~~~~~l~~~~ 217 (439)
. +++.++..++.++..+++||++
T Consensus 336 l-~~i~~lp~ll~ll~~~~lPESP 358 (742)
T TIGR01299 336 F-VIVCAFPCVFAIGALTFMPESP 358 (742)
T ss_pred H-HHHHHHHHHHHHHHHHHcCCCH
Confidence 3 4444444445555557788864
No 31
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=1.9e-23 Score=209.12 Aligned_cols=326 Identities=11% Similarity=-0.008 Sum_probs=206.6
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh----h--hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHH
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA----N--LFPSWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~----~--~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~ 138 (439)
.+.....+.+++++.|+++||+|||+++..+....++.... . ..++++.+++.|++.|++.+...++..+++.+
T Consensus 58 ~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~ 137 (417)
T PRK10489 58 VTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPA 137 (417)
T ss_pred HHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 34445566678889999999999999998887665543321 1 14577788889999999998887877777777
Q ss_pred HhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCc
Q 013645 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (439)
Q Consensus 139 ~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~ 218 (439)
.. |+++|+++.++.....++|..+|+.+++.+.... +|++. |....+..++..+..+.+|++++
T Consensus 138 ~~----------~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~-----~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ 201 (417)
T PRK10489 138 LV----------GRENLMQAGAITMLTVRLGSVISPALGGLLIAAG-----GVAWN-YGLAAAGTFITLLPLLRLPALPP 201 (417)
T ss_pred cc----------CHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH-----hhHHH-HHHHHHHHHHHHHHHHhCCCCCC
Confidence 75 7789999999999999999999999988776432 46664 33334444444444455665322
Q ss_pred cccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHH
Q 013645 219 KGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFD 297 (439)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~ 297 (439)
+++++ + ++.++.++ ..+..+++|.++......+......+ ...++|.+..+ .+.+.+..|.+....+++.
T Consensus 202 ~~~~~--~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~ 272 (417)
T PRK10489 202 PPQPR--E---HPLRSLLA---GFRFLLASPVVGGIALLGGLLTMASA-VRVLYPALADEVWQMGAAQIGLLYAAVPLGA 272 (417)
T ss_pred CCccc--c---cchHHHHH---HHHHHHcChHHHHHHHHHHHHHHHHh-HHHhhHHHHHhccCCChhHhHHHHHHHHHHH
Confidence 11111 0 01111122 23345677776554332222211111 22344444333 3556667888888899999
Q ss_pred HHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCC
Q 013645 298 AICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD 377 (439)
Q Consensus 298 ~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~ 377 (439)
+++.++.+++.||.++++ .+..+.++..+++. ++...++ .....++.+++|++.+...+...+++.+..|++
T Consensus 273 ~ig~~~~~~l~~~~~~~~-~l~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 344 (417)
T PRK10489 273 ALGALTSGWLAHSARPGL-LMLLSTLGSFLAVG--LFGLMPM-----WILAVLCLALFGYLSAISSLLQYTLLQTQTPDE 344 (417)
T ss_pred HHHHHHHHHhhhccCcch-HHHHHHHHHHHHHH--HHHccch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHH
Confidence 999999999999865544 33445544444432 2233322 245567778889988888888889999999987
Q ss_pred c-hhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHH-HHHHH
Q 013645 378 T-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICV-ALVGI 423 (439)
Q Consensus 378 ~-~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~~~~-~~~~~ 423 (439)
. +++.|.++..+++|..+++.+.+. .+....+...++..++ +++.+
T Consensus 345 ~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 396 (417)
T PRK10489 345 MLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLL 396 (417)
T ss_pred HHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Confidence 4 567888877777777776655433 3444555544444443 34433
No 32
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.93 E-value=2.3e-23 Score=203.69 Aligned_cols=311 Identities=14% Similarity=0.078 Sum_probs=207.9
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcc-----hhhHHHHHHHHhhhHHHHHHhhhhhHHHH
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFP-----SWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~-----~~~~li~~r~i~Gig~g~~~~~~~~~i~~ 138 (439)
.+.......+++++.|+++||+|||+++..+.++..+.... ...+ +++.+++.|++.|++.+..+++..++++|
T Consensus 40 ~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 119 (365)
T TIGR00900 40 ALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPD 119 (365)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445566778899999999999999999998776554433 2333 88888899999999999999999999998
Q ss_pred HhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCc
Q 013645 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (439)
Q Consensus 139 ~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~ 218 (439)
+. |+++|++++|+.....++|.++|+.++..+... .+||..+ .+..+..++..+..+++++|++
T Consensus 120 ~~----------~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-----~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 183 (365)
T TIGR00900 120 LV----------PEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT-----LGIKWAI-WVDAVGFAISALLIVSVRIPEL 183 (365)
T ss_pred cC----------CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-----hhHHHHH-HHHHHHHHHHHHHHHhcccccC
Confidence 87 788999999999999999999999998887653 2587743 3334434444333344443332
Q ss_pred cccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHH-HHHHhhcchhhhc-ccccccchHHHHHHHHHH
Q 013645 219 KGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQ-AFVWAEFTKEIVT-PALGVSGVGGAMAVYGAF 296 (439)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~-~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~ 296 (439)
+++++ ++.+ ++..++..+..++.+|+|+++......+...... ......+|....+ .+.+..+.+.+....+++
T Consensus 184 ~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (365)
T TIGR00900 184 AASEI-QALS---NAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLG 259 (365)
T ss_pred CCccc-cccc---hhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 21111 0000 0111111223445678888876655433332222 1111233332221 245556778888889999
Q ss_pred HHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccC
Q 013645 297 DAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH 376 (439)
Q Consensus 297 ~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~ 376 (439)
.++++++.+++.||.++|+. ...+..+..++.. ...+.++ + .....+..+++|++.+...+..++++.+..|+
T Consensus 260 ~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~-~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 332 (365)
T TIGR00900 260 ALLGALLLGLLGRYFKRMAL-MTGAIFVIGLAIL--VVGLTPP-N---FPLFLVLWFAIGVGYGPINVPQGTLLQRRVPA 332 (365)
T ss_pred HHHHHHHHHHHHHHhchhHH-HHHHHHHHHHHHH--HHHhhch-h---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 99999999999999987763 3344444443332 2233322 1 25566778889999999999999999999987
Q ss_pred Cc-hhhHHHHHHHHHHHHHHHHHHhhh
Q 013645 377 DT-EGAFAQLKVWQCASIAVVFFIGPY 402 (439)
Q Consensus 377 ~~-~~a~s~~~~~~~~g~~i~~~i~~~ 402 (439)
+. +.+.|.++..++++..+++.+.+.
T Consensus 333 ~~~g~~~~~~~~~~~~~~~~g~~~~g~ 359 (365)
T TIGR00900 333 ELLGRVFGAQFSLSHAAWPLGLILAGP 359 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 75 457899999998888887766543
No 33
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.93 E-value=1.1e-22 Score=202.07 Aligned_cols=347 Identities=13% Similarity=0.018 Sum_probs=210.5
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHH
Q 013645 24 KNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (439)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~ 99 (439)
+|..+.+++......+.........+..|.+.++.+.+.. ..+.....+.+++++.|+++||+|||+++..+.+..
T Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~ 83 (394)
T PRK11652 4 QRNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIF 83 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHH
Confidence 3444444444444443333333333444555544444332 345556677788999999999999999999998877
Q ss_pred HHHHHhh-hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHH
Q 013645 100 WLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (439)
Q Consensus 100 ~~~~~~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~ 178 (439)
.+..... ..+++..+++.|++.|++.+...+....+..|.. ++++|+++.++...+..+|..+|+.+++
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~i~~ 153 (394)
T PRK11652 84 ILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLY----------EGTQLRHANSLLNMGILVSPLLAPLIGG 153 (394)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655543 5678888889999999999877766666666554 6788999999998888899999998888
Q ss_pred HhhcCCCCCCCCcchHHHHHHHHHHHHHH-HHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHH
Q 013645 179 AVLKDDKGGSTSGTTLLFIVFLGVITLGT-ILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPL 257 (439)
Q Consensus 179 ~l~~~~~~~~~~w~~~~~~~~~~~~~l~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 257 (439)
.+... .+||..++ +..+..++.. +..+++||+++++++ + .+.+ ++.++.+++|+++.....
T Consensus 154 ~l~~~-----~g~~~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~---~~~~~~~~~~~~~~~~~~ 215 (394)
T PRK11652 154 LLTTL-----FGWRACYL-FLLLLGAGVTFSMARWMPETRPADAR--------R-TRVL---ASYRTLLSNRRFNCYLLM 215 (394)
T ss_pred HHHhc-----cChHHHHH-HHHHHHHHHHHHHHHhCCccCccccc--------h-hHHH---HHHHHHHcChHHHHHHHH
Confidence 77543 35887543 3333333322 233456664321111 0 1112 234456778877653332
Q ss_pred HHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhc
Q 013645 258 FAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINY 336 (439)
Q Consensus 258 ~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~ 336 (439)
.+.............+..+.+ .+.+....+.......++.++++.+.+++.||.+++............+.+. ...+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 293 (394)
T PRK11652 216 LIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMW--IPGW 293 (394)
T ss_pred HHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH
Confidence 221111111111222222222 2344456677777788888999999999999987322111111111111111 1112
Q ss_pred cCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHHhhhh
Q 013645 337 SVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 403 (439)
Q Consensus 337 ~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i~~~~ 403 (439)
....+ ........+++|++.+...+...+...+.+|++++.+.++.+..+.+|..++..+....
T Consensus 294 ~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~ 357 (394)
T PRK11652 294 FGVMN---VWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAML 357 (394)
T ss_pred hcccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 11111 24455667888888888899999999999987777777888888888888877665443
No 34
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.93 E-value=3.1e-23 Score=205.97 Aligned_cols=357 Identities=13% Similarity=0.043 Sum_probs=217.0
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHH
Q 013645 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (439)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~ 100 (439)
+.++.+..+.++.++....+.....+.+.+.++.+.... ..++......+++++.|+++||+|||+++..+.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~ 88 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFS 88 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 344445555566666666666556666666555444332 3455666778899999999999999999999988776
Q ss_pred HHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHH
Q 013645 101 LFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (439)
Q Consensus 101 ~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~ 179 (439)
+..+. ...+++..+++.|++.|++.+..++...+++.|+. |+++|++++|++....++|.++|+.++..
T Consensus 89 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 89 AGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESW----------PKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhC----------ChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65554 35688999999999999999999999889888887 78999999999999999999999998887
Q ss_pred hhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccch-h-------hhhhHHHHHHHHHHhh--ccc
Q 013645 180 VLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASV-N-------FYSYLVSLSKSITTLL--ADV 249 (439)
Q Consensus 180 l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~--~~~ 249 (439)
+....+ .+||..+ .+..+..++..+....+||+++.++++.++++. + .++..+...++..... +.+
T Consensus 159 l~~~~~---~~w~~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (405)
T TIGR00891 159 VVPVWG---DGWRALF-FISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAG 234 (405)
T ss_pred HHHhcC---ccHHHHH-HHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhh
Confidence 765321 2487743 333333333333334556643211110000000 0 0000000000000000 011
Q ss_pred hhHH----HHHHHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHH
Q 013645 250 RMLL----IIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIA 324 (439)
Q Consensus 250 ~~~~----l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~ 324 (439)
+.+. +.......+.........++.++.+ .+.+.++.+.+....+++.++++++.|++.||+++|+.+ ..+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~-~~~~~~ 313 (405)
T TIGR00891 235 KRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAY-VCSLLA 313 (405)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhh-HHHHHH
Confidence 1111 1111111111111112234443322 345566778888889999999999999999999988744 344443
Q ss_pred HHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh
Q 013645 325 QVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY 402 (439)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~ 402 (439)
..+... ...... +. .....+..++.+++.....+..++++.+.+|++. +.+.|+.+...++|..+++.+.+.
T Consensus 314 ~~~~~~-~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~ 386 (405)
T TIGR00891 314 GQLLII-PVFAIG-AN----VAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGAL 386 (405)
T ss_pred HHHHHH-HHHHhC-Cc----hHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 322211 122222 21 1334444455666666667788889999998875 457888888888888877766543
No 35
>PRK10133 L-fucose transporter; Provisional
Probab=99.93 E-value=6.4e-23 Score=206.23 Aligned_cols=337 Identities=12% Similarity=0.071 Sum_probs=213.0
Q ss_pred CccccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhH
Q 013645 22 TPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTT 97 (439)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~ 97 (439)
+++++...++.+.+.++...........+.|.+.++.+.+.. ..+.++..+++++++.|++.||+|||+++..+..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~ 99 (438)
T PRK10133 20 QSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLF 99 (438)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 344466666777777766666666666677777655555543 2455666778899999999999999999999999
Q ss_pred HHHHHHHhh----hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhh
Q 013645 98 GYWLFVAAN----LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVG 173 (439)
Q Consensus 98 ~~~~~~~~~----~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG 173 (439)
++++..+.+ ..+++..++++|+++|+|.|..+++.+++++++. ++++|++.++++.....+|..+|
T Consensus 100 ~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~----------~~~~~~~~~s~~~~~~~~G~~~g 169 (438)
T PRK10133 100 LYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLG----------PESSGHFRLNLAQTFNSFGAIIA 169 (438)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC----------ChhhHHHHHHHHHHHHHHHHHHH
Confidence 887766442 4688999999999999999999999999888764 56666677999999999999999
Q ss_pred hHHHHHhhc-CCC------------C---CC-----CCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhh
Q 013645 174 NLITLAVLK-DDK------------G---GS-----TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFY 232 (439)
Q Consensus 174 ~~i~~~l~~-~~~------------~---~~-----~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 232 (439)
+.++..+.. ..+ . +. .+||..++.+..+..++. ++..+.+.|+.+++++ ++ ++.
T Consensus 170 ~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~-~~~~~~~~p~~~~~~~-~~---~~~ 244 (438)
T PRK10133 170 VVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVA-LLIMLTKFPALQSDNH-SD---AKQ 244 (438)
T ss_pred HHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCCCCcccc-cc---ccc
Confidence 988776541 100 0 00 124432222222222222 2222222232211111 00 001
Q ss_pred hhHHHHHHHHHHhhccchhHHHHHHH-HHhhHHHHHHHhhcchhhh--cccccccchHHHHHHHHHHHHHHHHhhhhhhc
Q 013645 233 SYLVSLSKSITTLLADVRMLLIIPLF-AYSGLQQAFVWAEFTKEIV--TPALGVSGVGGAMAVYGAFDAICSLAAGRLTT 309 (439)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d 309 (439)
.+. .++.++.+++|+++...... ++.+.+.+.+ .+.+.++. ..+++.+..+.....++++.++|+++.|++.|
T Consensus 245 ~~~---~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~ 320 (438)
T PRK10133 245 GSF---SASLSRLARIRHWRWAVLAQFCYVGAQTACW-SYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLIS 320 (438)
T ss_pred cch---hhhHHHHHhCchHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 12344677888876544322 2233322222 23333321 23566677888889999999999999999999
Q ss_pred CCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHH
Q 013645 310 GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLK 386 (439)
Q Consensus 310 ~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~ 386 (439)
|+++|+.+ ..+.++..+.+. ...+.++ ........++|++.+...|..++...+..|++.+.+.++..
T Consensus 321 r~g~~~~l-~~~~~~~~~~~~--~~~~~~~------~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~ 388 (438)
T PRK10133 321 RFAPHKVL-AAYALIAMALCL--ISAFAGG------HVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV 388 (438)
T ss_pred HcCHHHHH-HHHHHHHHHHHH--HHHHcCC------hHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHh
Confidence 99988743 444444333322 1122222 12345677889999999999999999999886554545443
No 36
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.93 E-value=5.3e-24 Score=207.28 Aligned_cols=338 Identities=17% Similarity=0.167 Sum_probs=211.5
Q ss_pred HHHHHHHHHhhhhhhHh-hhccCCCCch----HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcc
Q 013645 36 AFLLIFLAYGAAQNLET-TVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFP 109 (439)
Q Consensus 36 ~~~~~~~~~~~~~~~~~-~l~~~~~~g~----~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~ 109 (439)
+.++...+........+ .+.++.+... ...+.......+++++.|+++||+|||+++..+.++.++.... .+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~ 83 (352)
T PF07690_consen 4 AFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFAS 83 (352)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhh
Confidence 33444444444444444 4544433332 2344555567788999999999999999999999988776333 3336
Q ss_pred hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCC
Q 013645 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGST 189 (439)
Q Consensus 110 ~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~ 189 (439)
+.+.+++.|++.|++.+..+++..+++.|+. |+++|++++|+.....++|.++|+.++..+... .
T Consensus 84 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-----~ 148 (352)
T PF07690_consen 84 NFWLLLIARFLLGIGSGFFSPASNALIADWF----------PPEERGRAFGILSAGFSLGSILGPLLGGFLISY-----F 148 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----------CTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-----C
T ss_pred hHHHHhhhccccccccccccccccccccccc----------hhhhhhhccccccchhhhhhhcccchhhhhhhc-----c
Confidence 6668889999999999999999999999887 778999999999999999999999999887643 3
Q ss_pred CcchHHHHHHHHHHHHHHHHH-HhccCCCccccccccccchhhhhhHHHHHHH-HHHhhccchhHHHHHHHHHhhHHHHH
Q 013645 190 SGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKS-ITTLLADVRMLLIIPLFAYSGLQQAF 267 (439)
Q Consensus 190 ~w~~~~~~~~~~~~~l~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~~ 267 (439)
+||.. |++.+++.++..++. .++++++++++++.++++. .+.++..++ .+...++|.++......+..+.....
T Consensus 149 ~~~~~-~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (352)
T PF07690_consen 149 GWRWA-FLISAILSLIAAILFILFLPEPPPPRERESPKESE---SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSG 224 (352)
T ss_dssp HHCCH-HHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT-----HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred ccccc-cccccchhhhhhhhHhhhhhhcccccccccccccc---cccccccccccccccccchhhhhhhhhhHHHHHHHH
Confidence 58875 444555555554432 3444433322211111100 000111111 23344566565333322222222222
Q ss_pred HHhhcchhh-hccccc-ccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccch
Q 013645 268 VWAEFTKEI-VTPALG-VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGT 345 (439)
Q Consensus 268 ~~~~~~~~~-~~~~~~-~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 345 (439)
...+.+.++ ...+.+ ....+.+....++..++++++.|++.||+++|+... .......+.... +.......+ .
T Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~---~ 299 (352)
T PF07690_consen 225 FSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLL-IAILLLILGALG-LLLLPFSSS---P 299 (352)
T ss_dssp HHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHHHHH-HCCSHHHCH---H
T ss_pred hhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH-HHHHHHHHHHHH-HHHHHHhhh---H
Confidence 222333321 123344 456777788889999999999999999998765433 333333322211 111111111 2
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHH
Q 013645 346 LYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVF 397 (439)
Q Consensus 346 ~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~ 397 (439)
.+.++..+++|++.+...+...+++.+..|++. +++.|.++..+++|..++|
T Consensus 300 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 300 VWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 455667888999999999999999999998775 5588999999999988875
No 37
>PRK10504 putative transporter; Provisional
Probab=99.93 E-value=2e-22 Score=204.94 Aligned_cols=356 Identities=8% Similarity=-0.029 Sum_probs=223.9
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHH
Q 013645 24 KNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (439)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~ 99 (439)
++..++++.+..+.++............|.+.++.+.+... .+......++++++.|+++||+|||+++..+.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~ 85 (471)
T PRK10504 6 DSVRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLF 85 (471)
T ss_pred hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 45566777777777777666655555566665554444322 34444566778899999999999999999988777
Q ss_pred HHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHH
Q 013645 100 WLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (439)
Q Consensus 100 ~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~ 178 (439)
++..+. ...+++..+++.|+++|++.+..++...+++.+.. |+++|+++.|+.....++|..+|+.+++
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~~~g 155 (471)
T PRK10504 86 TLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIV----------PREQYMAAMTFVTLPGQVGPLLGPALGG 155 (471)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 665444 35678888889999999999999888888888776 7889999999999999999999999988
Q ss_pred HhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHH-hccCCCccc-ccccc-----------------ccch-hhhhh----
Q 013645 179 AVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC-FLRKEEDKG-EKETA-----------------DASV-NFYSY---- 234 (439)
Q Consensus 179 ~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~-~l~~~~~~~-~~~~~-----------------~~~~-~~~~~---- 234 (439)
.+..+ .+||+.++ +...+..++.+... ..|+++.++ +.+.. +.+. .....
T Consensus 156 ~l~~~-----~gw~~~f~-~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (471)
T PRK10504 156 LLVEY-----ASWHWIFL-INIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAG 229 (471)
T ss_pred HHHhh-----ccHHHHHH-HHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHH
Confidence 87653 35887543 33444444443332 334322111 11100 0000 00000
Q ss_pred -------------HHH----HHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhh-cccccccchHHHHHHHHHH
Q 013645 235 -------------LVS----LSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAF 296 (439)
Q Consensus 235 -------------~~~----~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~ 296 (439)
.++ +..-..+++|||++.......++.+..........|.++. ..+.+....++......++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~ 309 (471)
T PRK10504 230 LVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLG 309 (471)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 000 0000124678888877655444333322211112222221 1344455677777888888
Q ss_pred HHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccC
Q 013645 297 DAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH 376 (439)
Q Consensus 297 ~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~ 376 (439)
.+++.++.|++.||+++|+.+ ..+.++..+... .+.+.+..+. .....+..++.|++.+...+..+++..+..|+
T Consensus 310 ~~~~~~~~~~l~~r~g~~~~~-~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 384 (471)
T PRK10504 310 SMGMKRIVVQVVNRFGYRRVL-VATTLGLALVSL--LFMLVALLGW--YYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPD 384 (471)
T ss_pred HHHHHHHHHHHHHHcCchHHH-HHHHHHHHHHHH--HHHhcccccc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 888899999999999987743 455554443322 1222221111 12334456677888888888888999999987
Q ss_pred Cc-hhhHHHHHHHHHHHHHHHHHHh
Q 013645 377 DT-EGAFAQLKVWQCASIAVVFFIG 400 (439)
Q Consensus 377 ~~-~~a~s~~~~~~~~g~~i~~~i~ 400 (439)
+. +.++|.+++.+.+|..++..+.
T Consensus 385 ~~~g~~~~~~~~~~~~g~~ig~~i~ 409 (471)
T PRK10504 385 NLASSGNSLLSMIMQLSMSIGVTIA 409 (471)
T ss_pred HhccchHHHHHHHHHHHHHHHHHHH
Confidence 65 4478888888888877765444
No 38
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.93 E-value=3.9e-23 Score=210.56 Aligned_cols=346 Identities=11% Similarity=0.029 Sum_probs=198.1
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhhh-------------cchhhHHHHHHHHhhhHHHHHHh
Q 013645 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANL-------------FPSWYTMVPASLYLGFAASIIWV 130 (439)
Q Consensus 64 ~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~~-------------~~~~~~li~~r~i~Gig~g~~~~ 130 (439)
..+......++++++.|+++||+|||+++..+..++++..+... .+++..++++|+++|++.|..++
T Consensus 60 ~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~ 139 (479)
T PRK10077 60 CVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASM 139 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhh
Confidence 35566667788999999999999999999999988766544321 12256778899999999999999
Q ss_pred hhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCC---CCCCCcchHHHHHHHHHHHHHH
Q 013645 131 GEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGT 207 (439)
Q Consensus 131 ~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~---~~~~~w~~~~~~~~~~~~~l~~ 207 (439)
...++++|+. |+++||+++|+......+|..+++.++..+..... ....+||+. |++.++..++..
T Consensus 140 ~~~~~i~e~~----------~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~-f~~~~~~~~~~~ 208 (479)
T PRK10077 140 LSPMYIAEIA----------PAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYM-FASEAIPALLFL 208 (479)
T ss_pred HHHHHHHhhC----------ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHH-HHHHHHHHHHHH
Confidence 9999999997 88999999999999889998888877665542210 123579885 444455555544
Q ss_pred HHHHhccCCCcc----cccccccc---chhhhhhHHHHHHHHHHhhc-----cchhHHHHHHHHHhh-----HHHH--H-
Q 013645 208 ILMCFLRKEEDK----GEKETADA---SVNFYSYLVSLSKSITTLLA-----DVRMLLIIPLFAYSG-----LQQA--F- 267 (439)
Q Consensus 208 ~~~~~l~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~g-----~~~~--~- 267 (439)
+..+++||+++. +++++.+. +.....+.++...+..+..+ .++.+......+..+ +.+. +
T Consensus 209 ~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (479)
T PRK10077 209 MLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGIN 288 (479)
T ss_pred HHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChh
Confidence 445678875431 11110000 00000000111111111111 111111111111111 1111 0
Q ss_pred HHhhc-chhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchH
Q 013645 268 VWAEF-TKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTL 346 (439)
Q Consensus 268 ~~~~~-~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (439)
....+ |....+.+.+....+......++..+++.++.|++.||++||+. +..+.++.+++...+.....++.. ..
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~-~i~~~~~~~v~~~~l~~~~~~~~~---~~ 364 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPL-QIIGALGMAIGMFSLGTAFYTQAP---GI 364 (479)
T ss_pred HHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHH-HHHhHHHHHHHHHHHHHHHhcCcc---cH
Confidence 11122 22222223333334555567888899999999999999998874 455666555543321111111111 12
Q ss_pred HHHHHHHHHhhhhhh-hhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh----------hhHHHHHHHHHH
Q 013645 347 YPLIMAALLGIGDGV-LNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----------ISLQAMLIVMVV 414 (439)
Q Consensus 347 ~~~~~~~l~G~~~~~-~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~----------~~~~~~~~~~~~ 414 (439)
....+.++++++.+. +.+..++++.|.+|++. +.+.|+.+..+.++..++..+.|. .+....+++..+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 444 (479)
T PRK10077 365 VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGC 444 (479)
T ss_pred HHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHH
Confidence 333344445544433 44678899999999765 457788777777777665333331 223344555555
Q ss_pred HHHHHHHHHH
Q 013645 415 GICVALVGIL 424 (439)
Q Consensus 415 ~~~~~~~~~~ 424 (439)
+.+++++..+
T Consensus 445 ~~~~~~~~~~ 454 (479)
T PRK10077 445 MGVLAALFMW 454 (479)
T ss_pred HHHHHHHHHH
Confidence 5455544433
No 39
>PRK11043 putative transporter; Provisional
Probab=99.93 E-value=2.6e-22 Score=199.83 Aligned_cols=336 Identities=12% Similarity=0.012 Sum_probs=208.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-
Q 013645 31 HILSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA- 105 (439)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~- 105 (439)
.+..+...+.+.+.....+..+.+.++.+.+.. ..++....+.+++++.|+++||+|||+++..+.....+....
T Consensus 9 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 88 (401)
T PRK11043 9 VYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGM 88 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHH
Confidence 333333333343433333444444444444332 345556667789999999999999999999998877665444
Q ss_pred hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCC
Q 013645 106 NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK 185 (439)
Q Consensus 106 ~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~ 185 (439)
...++++.+++.|++.|++.+...+...+++.|.. +++++++..+.......+|..+|+.++..+...
T Consensus 89 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-- 156 (401)
T PRK11043 89 LWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRY----------PAQKANRVFATIMPLVALSPALAPLLGAWLLNH-- 156 (401)
T ss_pred HHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 35678888889999999998877776666676665 778889999988888889999999988887643
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHH
Q 013645 186 GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQ 265 (439)
Q Consensus 186 ~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 265 (439)
.+||.. |.+..++.++..+..++++|++++++++ ++ + .+.++.+++|+++.............
T Consensus 157 ---~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (401)
T PRK11043 157 ---FGWQAI-FATLFAITLLLILPTLRLKPSKKARKQS------QD----A---LTFKQLLKSKTYLGNVLIFAACSAAF 219 (401)
T ss_pred ---CChHHH-HHHHHHHHHHHHHHHHHcCCCCCccccc------hH----H---HHHHHHHcChhHHHHHHHHHHHHHHH
Confidence 358774 3344444544444444555432211100 00 1 13445677888765443322222111
Q ss_pred HHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHH-HHHhhccCCCCccc
Q 013645 266 AFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL-WILINYSVTSGVLG 344 (439)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~ 344 (439)
..+..+.|..+.+.+.+.+..|.......++.++|+++.+++.||+++|+.. ....+..+++.. ..........+
T Consensus 220 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--- 295 (401)
T PRK11043 220 FAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL-PWLLVLFAVSVIAIWLASLLSHPS--- 295 (401)
T ss_pred HHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH-HHHHHHHHHHHHHHHHHHHhccCc---
Confidence 1122334433333455556678777778888899999999999999876533 233332222211 11111111111
Q ss_pred hHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHH
Q 013645 345 TLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFI 399 (439)
Q Consensus 345 ~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i 399 (439)
.....+...++|++.+...+...+...+..|++++++.|+++..+..+...+..+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~ 350 (401)
T PRK11043 296 LVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLL 350 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHH
Confidence 2344455677888888888888888888888877778888888876665554433
No 40
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.93 E-value=2.8e-22 Score=199.02 Aligned_cols=338 Identities=13% Similarity=0.050 Sum_probs=206.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCch----HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHH
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~----~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~ 103 (439)
|++..+.++.++...+-.......+.+..|.+.+. ...+.....+++.++++|+++||+|||+++..+.+++.+..
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~ 82 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGC 82 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHH
Confidence 45555556655554433222222222222222222 22345556778889999999999999999999998876654
Q ss_pred Hhh-hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhc
Q 013645 104 AAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (439)
Q Consensus 104 ~~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~ 182 (439)
+.. ..++. ++.|+++|++.+..+|+..+++.|+. |+++|+++.|+.....+.|.++||.+++.+..
T Consensus 83 ~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~----------~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~ 149 (393)
T PRK11195 83 LLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELL----------PGEKLVKANGWMEGSTIAAILLGTVLGGALAD 149 (393)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 432 33343 56899999999999999999999997 88999999999999999999999999988865
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHH-h
Q 013645 183 DDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAY-S 261 (439)
Q Consensus 183 ~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~ 261 (439)
. .|+.. +.+...+.+++.+..+.+||+++++++. +.+ .....++.....+.++++|.+......... .
T Consensus 150 ~------~~~~~-~~i~~~~~~~~~~~~~~l~~~~~~~~~~--~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 218 (393)
T PRK11195 150 P------HAEAA-LAVCALIYLLAALFNLFIPRLGARRPGQ--SWN--PIALLRDFFHACRVLWRDKLGRFSLAGTTLFW 218 (393)
T ss_pred H------HHHHH-HHHHHHHHHHHHHHHhcCCCCccccccc--CCC--HHHHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 2 14442 2222332333333345667643221110 000 000111111223456677776543322111 1
Q ss_pred hHHH--HHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCC
Q 013645 262 GLQQ--AFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVT 339 (439)
Q Consensus 262 g~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~ 339 (439)
.... .+....+.+.. .+.+..+.|.+....+++.++++++.+++.||.++++ ++..+... ++... .+...++
T Consensus 219 ~~~~~~~~~~~~~~~~~--lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~-~~~~g~~~-~~~~~--~~~~~~~ 292 (393)
T PRK11195 219 GAGATLRFLVLAWAPVA--LGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR-VLPAGILM-GLVVL--LMALQHS 292 (393)
T ss_pred HHHHHHHHHHHHHHHHH--cCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-hHHHHHHH-HHHHH--HHHHHhH
Confidence 1111 11111111111 2455667899999999999999999999999887665 34445432 22221 1223222
Q ss_pred CCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc--hhhHHHHHHHHHHHHHHHHHHh
Q 013645 340 SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT--EGAFAQLKVWQCASIAVVFFIG 400 (439)
Q Consensus 340 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~--~~a~s~~~~~~~~g~~i~~~i~ 400 (439)
+....+..+++|++.+...+..++.+.+..|+|. +.+.|..+..++++..++..+.
T Consensus 293 -----~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~ 350 (393)
T PRK11195 293 -----LLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLY 350 (393)
T ss_pred -----HHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHH
Confidence 2445566778899888888888888888776654 4577888899988877765444
No 41
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.93 E-value=6.1e-22 Score=197.88 Aligned_cols=308 Identities=13% Similarity=0.061 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhh
Q 013645 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (439)
Q Consensus 63 ~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~ 141 (439)
...++++..+++++++.|+++||+|||+++..+.+++++..... ..+++..++++|+++|++.+...+....++.|..
T Consensus 55 ~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~- 133 (413)
T PRK15403 55 ASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAF- 133 (413)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 45777888889999999999999999999999988887765543 6789999999999999999866665566666665
Q ss_pred hhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHH-HHhccCCCccc
Q 013645 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKG 220 (439)
Q Consensus 142 ~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~ 220 (439)
|+++|+++++++....++|+.+|+.++..+..+ .+||+. |++..++.++..+. .+++||+++++
T Consensus 134 ---------~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~-----~gw~~~-f~~~~~~~~i~~~~~~~~lp~~~~~~ 198 (413)
T PRK15403 134 ---------GQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF-----VHWKVL-FAIIAVMGLIAFVGLLLAMPETVKRG 198 (413)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCHHHH-HHHHHHHHHHHHHHHHHhCCCCcccc
Confidence 778899999999999999999999998887643 358875 44455555555443 34567643321
Q ss_pred cccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHH
Q 013645 221 EKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAI 299 (439)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~i 299 (439)
+++ .+.++..+++++.+|||+++......+........+....|..+.+ .+.+..+.++.......+.++
T Consensus 199 ~~~---------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i 269 (413)
T PRK15403 199 AVP---------FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIV 269 (413)
T ss_pred CCC---------CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 111 0111223456678899999876654443332221222334444433 245556678777777778888
Q ss_pred HHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhh--ccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCC
Q 013645 300 CSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILIN--YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD 377 (439)
Q Consensus 300 g~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~ 377 (439)
++.+.+++.++..+++.+ .....+..++...+... ..++. +...++..+++++|.+...|...+..-.-.+++
T Consensus 270 ~~~l~~~~~~~~~~~~~~-~~~~~~~~ig~~l~~~~~~~~~~~----~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~ 344 (413)
T PRK15403 270 ANAIVARFVKDPTEPRFI-WRAVPIQLVGLALLIVGNLLWPHV----WLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLP 344 (413)
T ss_pred HHHHHHHHhccCCchhHH-HHHHHHHHHHHHHHHHHHHHcccc----HHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCC
Confidence 888888766443333221 11111111111111111 11221 233456777788888887777664332222223
Q ss_pred chhhHHHHHHHHHHHHHHHHHHh
Q 013645 378 TEGAFAQLKVWQCASIAVVFFIG 400 (439)
Q Consensus 378 ~~~a~s~~~~~~~~g~~i~~~i~ 400 (439)
++++.|.+++.+..+...+....
T Consensus 345 ~G~a~a~~~~~~~~~~~~~~~~~ 367 (413)
T PRK15403 345 KGTVSASLNMVILMVMAVSVEIG 367 (413)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHH
Confidence 45677788888776666554443
No 42
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=2e-22 Score=200.54 Aligned_cols=333 Identities=11% Similarity=0.047 Sum_probs=206.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhH-hhhccCCCCchHHHHHHHHH----HHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHH
Q 013645 30 VHILSCAFLLIFLAYGAAQNLE-TTVNTEGNLGTISLGILYTS----FTCFSLVASLVVRVLGSKNALILGTTGYWLFVA 104 (439)
Q Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~-~~l~~~~~~g~~~~~~~~~~----~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 104 (439)
++.+ +..++...+.....++. ..+.++.+.+....+..... ..+.+++.|+++||+|||+++..+.....+..+
T Consensus 13 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLL-IDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHH
Confidence 4444 34444444433333333 33344445555444444443 344568899999999999999999998877655
Q ss_pred hh-hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcC
Q 013645 105 AN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (439)
Q Consensus 105 ~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~ 183 (439)
.. ..++++.+++.|++.|++.+..+++..+++.+.. |+++|++++|+.....++|..+|+.+++.+..
T Consensus 92 ~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~----------~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~- 160 (400)
T PRK11646 92 TMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLI----------RPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ- 160 (400)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 53 5678888888999999999988888888888776 78899999999999999999999999988862
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHH-HHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhh
Q 013645 184 DKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSG 262 (439)
Q Consensus 184 ~~~~~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 262 (439)
.+|+..++ +..+..++..+. .+++||+++++++ ++.++ +.++.++||+++......+...
T Consensus 161 -----~g~~~~f~-~~~~~~~~~~i~~~~~~~~~~~~~~~----------~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
T PRK11646 161 -----YDFRLVCA-TGAVLFVLAAAFNAWLLPAYKLSTVR----------TPVRE---GMTRVLRDKRFVTYVLTLTGYY 221 (400)
T ss_pred -----hhHHHHHH-HHHHHHHHHHHHHHHhCCcccccccc----------hhhHH---HHHHHHcCchHHHHHHHHHHHH
Confidence 25776433 333333333322 3445542211100 01111 2345678888765433322111
Q ss_pred HHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcC-CCCcceehhhHHHHHHHHHHHHHhhccCCCC
Q 013645 263 LQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSG 341 (439)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~-~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~ 341 (439)
.........+|.+..+.+.+..+.+......+++...+....+++.|| .+.++ .+..+.++..++.. .+...++
T Consensus 222 ~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~~~~~~~~--~l~~~~~-- 296 (400)
T PRK11646 222 MLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEH-RLMAGLLIMSLSMF--PIGMVSN-- 296 (400)
T ss_pred HHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH-HHHHHHHHHHHHHH--HHHHhhh--
Confidence 111111223443333333344567777777777776666666666654 44333 23455555444432 2233332
Q ss_pred ccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhh
Q 013645 342 VLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP 401 (439)
Q Consensus 342 ~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~ 401 (439)
.....+..++++++.+...|...+++.+..|++. ++++|.++...++|..+++.+.+
T Consensus 297 ---~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G 354 (400)
T PRK11646 297 ---LQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGG 354 (400)
T ss_pred ---HHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchH
Confidence 2344556677888888888899999999998765 56889999988888888765543
No 43
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.93 E-value=1.6e-22 Score=199.40 Aligned_cols=307 Identities=13% Similarity=0.061 Sum_probs=194.5
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhh
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~ 143 (439)
.++.....++++++.|++.||+|||+++..+.++..+..... ..+++..+++.|++.|++.+...+...+++.++.
T Consensus 32 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~--- 108 (377)
T PRK11102 32 LSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMF--- 108 (377)
T ss_pred HHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 345555667888999999999999999999998877665543 5678888889999999999998888888888886
Q ss_pred hhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHH-HHhccCCCccccc
Q 013645 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEK 222 (439)
Q Consensus 144 a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~ 222 (439)
|+++|++++++......+|..+|+.++..+... .+||.. |.+..++.++..+. .+++||+++++++
T Consensus 109 -------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (377)
T PRK11102 109 -------PKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW-----FSWHAI-FWVLALAAILAAALVFFFIPETLPKERR 175 (377)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cChHHH-HHHHHHHHHHHHHHHHHhCCccCccccc
Confidence 788999999999999999999999988877643 358774 44444444444333 3456664332111
Q ss_pred cccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHH
Q 013645 223 ETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICS 301 (439)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~ 301 (439)
+. .+.++..++.++.+++|+.+......+.............+..+.+ .+.+.++.+......+++.++++
T Consensus 176 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~ 247 (377)
T PRK11102 176 QP--------FHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMT 247 (377)
T ss_pred CC--------CChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 10 0112222344567788887654443222211111112222322222 35566678888888999999999
Q ss_pred HhhhhhhcCCCCcceehhhHHHHHHH-HHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchh
Q 013645 302 LAAGRLTTGLPSITFIVSGGAIAQVV-VFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG 380 (439)
Q Consensus 302 ~~~G~l~d~~~~r~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~ 380 (439)
++.|++.||+++|+.+ ..+.++..+ +.........+. + .....+...+++.+.+...+...+.+.+..|+++++
T Consensus 248 ~~~g~l~~r~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 322 (377)
T PRK11102 248 IINSRFVRRVGALNML-RFGLWIQFIMGIWLVVSALLDL-G---FWALVVGVAAFVGCVSMISSNAMAVILDEFPHMAGT 322 (377)
T ss_pred HHHHHHHHHhCHHHHH-HHHHHHHHHHHHHHHHHHHHhh-h---HHHHHHHHHHHHHHHHHhhHHHHHHHhccccccchH
Confidence 9999999999988643 344443222 111111111111 1 123333444444545555555666777888877776
Q ss_pred hHHHHHHHH-HHHHHHHHHHh
Q 013645 381 AFAQLKVWQ-CASIAVVFFIG 400 (439)
Q Consensus 381 a~s~~~~~~-~~g~~i~~~i~ 400 (439)
+.+.++... .+|..++..+.
T Consensus 323 ~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 323 ASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 777655543 35556665554
No 44
>TIGR00895 2A0115 benzoate transport.
Probab=99.93 E-value=7e-23 Score=202.71 Aligned_cols=332 Identities=14% Similarity=0.076 Sum_probs=205.7
Q ss_pred hhhhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHH
Q 013645 46 AAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLY 120 (439)
Q Consensus 46 ~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i 120 (439)
......+.+.++.+..... .+.......+++++.|+++||+|||+++..+.++..+..+. ...+++..+++.|++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (398)
T TIGR00895 35 AMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFL 114 (398)
T ss_pred HHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 3344555555554444332 33444556678899999999999999999998877665544 356788888899999
Q ss_pred hhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHH
Q 013645 121 LGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFL 200 (439)
Q Consensus 121 ~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~ 200 (439)
.|++.+..++...++++|+. |+++|++++|+......+|..+|+.++..+... .+|+..++ +.+
T Consensus 115 ~g~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~g~~~~~~-~~~ 178 (398)
T TIGR00895 115 AGLGLGGLMPNLNALVSEYA----------PKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV-----FGWRSLFY-VGG 178 (398)
T ss_pred HhcccccchhhHHHHHHHHc----------CHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc-----ccceeehh-hhh
Confidence 99999999999899998887 778999999999999999999999988777543 35776433 333
Q ss_pred HHHHH-HHHHHHhccCCCcc---ccccc-c------------cc--chhhhhhHHHHHHHHHHhhccch----hHHHHHH
Q 013645 201 GVITL-GTILMCFLRKEEDK---GEKET-A------------DA--SVNFYSYLVSLSKSITTLLADVR----MLLIIPL 257 (439)
Q Consensus 201 ~~~~l-~~~~~~~l~~~~~~---~~~~~-~------------~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~ 257 (439)
++..+ ..+...++||+++. ++++. . +. +..+.++..+..++..+.+++++ .+.....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T TIGR00895 179 IAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLL 258 (398)
T ss_pred hHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHH
Confidence 33332 33334566664321 10000 0 00 00000000001112222222222 2222221
Q ss_pred HHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhcc
Q 013645 258 FAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYS 337 (439)
Q Consensus 258 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~ 337 (439)
.+...........+.|....+.+.+.+..+......+++.++++++.|++.||+++|+ +. .+..+..+.... .....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~-~~~~~~~~~~~~-~~~~~ 335 (398)
T TIGR00895 259 YFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV-TA-LLLLLGAVFAVL-VGSTL 335 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH-HH-HHHHHHHHHHHH-HHHHh
Confidence 1111111112222333222333455566788888889999999999999999999773 33 233222222111 11112
Q ss_pred CCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhh
Q 013645 338 VTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP 401 (439)
Q Consensus 338 ~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~ 401 (439)
++ .....+..+++|++.+...+..++++.+.+|++. +.+.|.++....+|..+++.+.+
T Consensus 336 ~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G 395 (398)
T TIGR00895 336 FS-----PTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAG 395 (398)
T ss_pred hC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 22 2455677788899999999999999999998875 45788888888888888876654
No 45
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.93 E-value=1e-22 Score=207.63 Aligned_cols=350 Identities=10% Similarity=0.021 Sum_probs=222.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhccCCCCch----HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-
Q 013645 31 HILSCAFLLIFLAYGAAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA- 105 (439)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~----~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~- 105 (439)
+.+.++.++............|.+.++.+.+. ...+.......++.++.|++.||+|||+++..+.+++.+....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 84 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLC 84 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444455555555433322 2345556677788899999999999999999999888776554
Q ss_pred hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCC
Q 013645 106 NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK 185 (439)
Q Consensus 106 ~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~ 185 (439)
...+++..+++.|+++|++.+...+...+++.++. |+++|++++|++.....+|..+|+.+++.+..+
T Consensus 85 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~----------~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-- 152 (485)
T TIGR00711 85 GVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIY----------PPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN-- 152 (485)
T ss_pred hCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHC----------CHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC--
Confidence 35789999999999999999999999899999887 789999999999999999999999998887643
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHH-HHhccCCCcccccccc---------------------ccchh-hhhhH-------
Q 013645 186 GGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETA---------------------DASVN-FYSYL------- 235 (439)
Q Consensus 186 ~~~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~~~~---------------------~~~~~-~~~~~------- 235 (439)
.+||+.++ +...+.++..+. .+++|+++++++++.+ +.+.. .....
T Consensus 153 ---~~w~~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (485)
T TIGR00711 153 ---YHWRWIFL-INVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITG 228 (485)
T ss_pred ---cCceehhh-hhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHH
Confidence 35887544 334444433333 3445553322111000 00000 00000
Q ss_pred --------HHHHH-----HHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHH
Q 013645 236 --------VSLSK-----SITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICS 301 (439)
Q Consensus 236 --------~~~~~-----~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~ 301 (439)
..+.+ ...+.+++|+++......+..+.........+|.++.+ .+.+..+.+......+++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~ 308 (485)
T TIGR00711 229 LVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSS 308 (485)
T ss_pred HHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 00000 01245677777665444333333221111233333322 35566678888888999999999
Q ss_pred HhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hh
Q 013645 302 LAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EG 380 (439)
Q Consensus 302 ~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~ 380 (439)
++.|++.||+++|+. +..+..+..++..+......++.+ ........++.|++.+...+.......+..|+++ +.
T Consensus 309 ~~~g~l~~r~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~ 384 (485)
T TIGR00711 309 PIAGRMGDKIDPRKL-VTIGLILYAVGFYWRAFTFTPDTP---FLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIAR 384 (485)
T ss_pred HHHHHHHhhcCcHHH-HHHHHHHHHHHHHHHhccCCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhH
Confidence 999999999998764 445655555443321112222322 2445556778899888877777777777777664 55
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 013645 381 AFAQLKVWQCASIAVVFFIG 400 (439)
Q Consensus 381 a~s~~~~~~~~g~~i~~~i~ 400 (439)
+.|.++..+.+|..++..+.
T Consensus 385 ~~~~~~~~~~~g~~ig~~i~ 404 (485)
T TIGR00711 385 GSSLSNFTRQLGGSIGTALI 404 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 78899998888888775443
No 46
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.92 E-value=3.8e-23 Score=209.97 Aligned_cols=345 Identities=11% Similarity=-0.078 Sum_probs=213.3
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-h--cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhh
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~--~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~ 141 (439)
.+.++..+.+++++.|++.||+|||+++..+.+++++..+.. . ..++..+++.|+++|++.+..+++...+++++.
T Consensus 82 ~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~- 160 (465)
T TIGR00894 82 LSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWA- 160 (465)
T ss_pred HHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcC-
Confidence 455566778888999999999999999999998877665442 2 345777888999999999999999889998887
Q ss_pred hhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHH-HhccCCC-cc
Q 013645 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEE-DK 219 (439)
Q Consensus 142 ~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~-~~l~~~~-~~ 219 (439)
|+++|++++|+...+.++|.++|++++..+.... .+||.. |.+.+++.++..++. .+.+|++ ++
T Consensus 161 ---------~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~----~gw~~~-f~i~~~~~~~~~~~~~~~~~~~p~~~ 226 (465)
T TIGR00894 161 ---------PPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW----GGWPMI-FYVFGIVGCAWSLLWFVFPADDPSIH 226 (465)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----CCCCee-hhhhhHHHHHHHHHHHHHhcCCcccC
Confidence 8899999999999999999999999988775431 258874 334455444433333 3344422 21
Q ss_pred ccccccccc---h--hhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHH
Q 013645 220 GEKETADAS---V--NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVY 293 (439)
Q Consensus 220 ~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~ 293 (439)
++++..+.+ . +.+.+..+....+++.+++++++......+...........++|.++.+ .+.+..+.|+.....
T Consensus 227 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~ 306 (465)
T TIGR00894 227 PCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLP 306 (465)
T ss_pred CCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHH
Confidence 111100000 0 0000000000124467788888776655443333332333455655433 356666788888888
Q ss_pred HHHHHHHHHhhhhhhcCCCCccee-------hhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhH
Q 013645 294 GAFDAICSLAAGRLTTGLPSITFI-------VSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQL 366 (439)
Q Consensus 294 ~i~~~ig~~~~G~l~d~~~~r~~~-------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 366 (439)
.++.+++.++.|+++||.++|+.. +..+......+..........+. .....++..+.+.+.+...+..
T Consensus 307 ~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~ 382 (465)
T TIGR00894 307 YLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAA----FYLTIIILTLANAVSSGPLAGV 382 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCc----hHHHHHHHHHHHHHhhhhhhhh
Confidence 999999999999999987543211 01111110111111011121121 1233334444444444444445
Q ss_pred HHHHHhhccCCchhhHHHHHHHHHHHHHHHHHHhhh-------hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 367 SALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY-------ISLQAMLIVMVVGICVALVGILFLTI 428 (439)
Q Consensus 367 ~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (439)
.....+..|+..+.+.++.+....+|..+++.+.+. ..+...+.+.+++.+++.+.+....+
T Consensus 383 ~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 451 (465)
T TIGR00894 383 LINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGS 451 (465)
T ss_pred hhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 555667777765667788888888888777655432 23667778888888888877765443
No 47
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.92 E-value=1.4e-23 Score=212.59 Aligned_cols=347 Identities=13% Similarity=0.059 Sum_probs=199.9
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-h---cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHH
Q 013645 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L---FPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (439)
Q Consensus 64 ~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~---~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~ 139 (439)
..++.+....+++++.|+++||+|||+++..+.+++.+..+.. . ..+++.+++.|++.|+|.+..++...++++|+
T Consensus 76 ~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~ 155 (481)
T TIGR00879 76 VVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEI 155 (481)
T ss_pred HHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHcc
Confidence 4566777788999999999999999999999998776654443 2 23445788899999999999999888888888
Q ss_pred hhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHH---HHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCC
Q 013645 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT---LAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (439)
Q Consensus 140 ~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~---~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~ 216 (439)
. |+++|+++++++.....+|..+|+.++ .... ...+||..++ +..+..++..+..+++||+
T Consensus 156 ~----------~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~-----~~~~w~~~f~-~~~~~~~~~~~~~~~l~~~ 219 (481)
T TIGR00879 156 A----------PKALRGALTSLYQLAITFGILVAYGFGSGKVSLN-----NTLGWRIPLG-LQLIPAGLLFLGLFFLPES 219 (481)
T ss_pred C----------ChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCC-----CCccHHHHHH-HHHHHHHHHHHHHhcCCCC
Confidence 6 889999999999999999999999887 2221 1246887533 3444444444445667764
Q ss_pred Ccc----cccccccc-------chhhhhhHHH------------------HHHHHHHhhcc--chhHHHHHHHHHhhHH-
Q 013645 217 EDK----GEKETADA-------SVNFYSYLVS------------------LSKSITTLLAD--VRMLLIIPLFAYSGLQ- 264 (439)
Q Consensus 217 ~~~----~~~~~~~~-------~~~~~~~~~~------------------~~~~~~~~~~~--~~~~~l~~~~~~~g~~- 264 (439)
++. ++.+..++ +........+ ..++..+..++ ++........++....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (481)
T TIGR00879 220 PRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTG 299 (481)
T ss_pred hHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhC
Confidence 321 00000000 0000000000 00111111111 1111111111111110
Q ss_pred HHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHH-hhccCCCC--
Q 013645 265 QAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INYSVTSG-- 341 (439)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~-~~~~~~~~-- 341 (439)
........+....+.+.+....+......+++.++++++.|+++||+++|+.+ ..+.++.++++..+. ..+.....
T Consensus 300 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (481)
T TIGR00879 300 INAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL-LIGAAGMAICLFVLGILGASFVTGSS 378 (481)
T ss_pred CeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH-HHHHHHHHHHHHHHHHHhhcccCCcc
Confidence 00111112222223345555567777788899999999999999999988744 455555444432211 11111110
Q ss_pred -ccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHH
Q 013645 342 -VLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVG 415 (439)
Q Consensus 342 -~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~ 415 (439)
...........++.+.......+...+++.|.+|++. +.+.+..+...++|.++++.+.+. .++...+++++++
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~ 458 (481)
T TIGR00879 379 KSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGL 458 (481)
T ss_pred cchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHH
Confidence 0001222222222222223345667778899999865 457888888888888777655443 2455666777777
Q ss_pred HHHHHHHHHHHH
Q 013645 416 ICVALVGILFLT 427 (439)
Q Consensus 416 ~~~~~~~~~~~~ 427 (439)
.+++++..++..
T Consensus 459 ~~~~~i~~~~~~ 470 (481)
T TIGR00879 459 NVLGLIFVYFFL 470 (481)
T ss_pred HHHHHHHHheec
Confidence 666666655443
No 48
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.92 E-value=2.7e-22 Score=202.93 Aligned_cols=368 Identities=11% Similarity=0.018 Sum_probs=221.5
Q ss_pred HHHHHHHHHHHHHHHhh---hhhhHhhhccCCCCch----HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHH
Q 013645 30 VHILSCAFLLIFLAYGA---AQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (439)
Q Consensus 30 ~~~l~~~~~~~~~~~~~---~~~~~~~l~~~~~~g~----~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~ 102 (439)
|.++..+++.....+.. .....+.+.++.+... ...+..+....++.++.|+++||+|||++++.+.++..+.
T Consensus 18 w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~ 97 (455)
T TIGR00892 18 WVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLG 97 (455)
T ss_pred hHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHH
Confidence 44444455554444322 2233444444433332 2344555566778899999999999999999998777665
Q ss_pred HHhh-hcchhhHHH-HHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHh
Q 013645 103 VAAN-LFPSWYTMV-PASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (439)
Q Consensus 103 ~~~~-~~~~~~~li-~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l 180 (439)
.+.. ..++++.++ ..|++.|++.+..++...+++.++. +++|+++.|+..++..+|..+|++++..+
T Consensus 98 ~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~-----------~~~r~~a~g~~~~~~~~g~~~~~~l~~~l 166 (455)
T TIGR00892 98 MILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYF-----------YRRRPLANGLAMAGSPVFLSTLAPLNQYL 166 (455)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHH-----------HhhHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 4443 557777665 4579999999877666666666664 47899999999999999999999888776
Q ss_pred hcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccC-CCc-c--ccc--ccccc--chhh--hhhHHHHHHHH--HHhhcc
Q 013645 181 LKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK-EED-K--GEK--ETADA--SVNF--YSYLVSLSKSI--TTLLAD 248 (439)
Q Consensus 181 ~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~-~~~-~--~~~--~~~~~--~~~~--~~~~~~~~~~~--~~~~~~ 248 (439)
... .+||+. |.+.+++.++..+..+++++ +++ + +++ +..+. +.++ .....++..+. .+.+++
T Consensus 167 ~~~-----~gwr~~-f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (455)
T TIGR00892 167 FES-----FGWRGS-FLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTH 240 (455)
T ss_pred HHH-----hChHHH-HHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcC
Confidence 543 358875 44445555444443334433 211 0 110 00000 0000 00001111111 246788
Q ss_pred chhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCC--Ccceeh-hhHHHHH
Q 013645 249 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLP--SITFIV-SGGAIAQ 325 (439)
Q Consensus 249 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~--~r~~~~-~~g~~~~ 325 (439)
|+++......+..+........+++.+..+.+++....+.+....+++.++++++.|+++||.. +|+... ..+.+..
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 320 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFN 320 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 8887665543333332211223344443334556667788888899999999999999999742 222221 1122222
Q ss_pred HHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh--
Q 013645 326 VVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY-- 402 (439)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~-- 402 (439)
.+++. +....++ ...+++..+++|++.+...+..++++.+.+|++. +.++|+++..+++|..+++.+.+.
T Consensus 321 ~l~~l--l~~~~~~-----~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~ 393 (455)
T TIGR00892 321 GLTHL--LCALAGD-----YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLV 393 (455)
T ss_pred HHHHH--HHHHhch-----HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeee
Confidence 22221 2222222 3456677888999998888999999999998765 567899999998998888765542
Q ss_pred ---hhHHHHHHHHHHHHHHHHH
Q 013645 403 ---ISLQAMLIVMVVGICVALV 421 (439)
Q Consensus 403 ---~~~~~~~~~~~~~~~~~~~ 421 (439)
.++...+++.+++.+++++
T Consensus 394 ~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 394 DATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred hhcCCcchHHHHhhHHHHHHHH
Confidence 2466666666666555554
No 49
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.92 E-value=1e-22 Score=199.80 Aligned_cols=348 Identities=12% Similarity=0.082 Sum_probs=206.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhh-hccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHH
Q 013645 29 DVHILSCAFLLIFLAYGAAQNLETT-VNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (439)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~ 103 (439)
+.+...+++++.+..+.....+.+. +.++.+.+.. ..+.....+++++++.|++.||+|||+++..+.++..+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPC 81 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 4455666666666666666666663 5555444443 3455566778889999999999999999999998877765
Q ss_pred Hh-hhcc-hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhh
Q 013645 104 AA-NLFP-SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (439)
Q Consensus 104 ~~-~~~~-~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~ 181 (439)
+. ...+ +++.+++.|++.|++.+. ++...++++++. |+++|++++++.....++|..+|+.++..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 82 LWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFF----------PKKIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhc----------CHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 54 3567 888888999999999664 455567777776 7889999999998888888888877766554
Q ss_pred cCC-----CCCCCCcchHHHHHHHHHHHH-HHHHHHhccCCCccccccc-cccchhhhhhHHHHHHHHHHhhccchhHHH
Q 013645 182 KDD-----KGGSTSGTTLLFIVFLGVITL-GTILMCFLRKEEDKGEKET-ADASVNFYSYLVSLSKSITTLLADVRMLLI 254 (439)
Q Consensus 182 ~~~-----~~~~~~w~~~~~~~~~~~~~l-~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (439)
... .....+||+.+++...++..+ ..+...+.+|.+++++++. .+.+.......++..++..+.+++|+++..
T Consensus 151 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (366)
T TIGR00886 151 GSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWIL 230 (366)
T ss_pred HHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhH
Confidence 311 011246887553443333333 2233344454322111110 000000000001111234567788888766
Q ss_pred HHHHHHh-hHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHH
Q 013645 255 IPLFAYS-GLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI 332 (439)
Q Consensus 255 ~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~ 332 (439)
....+.. +.... ...+++.++.+ .+.+..+.+.......+..++++++.|+++||+++|+.+ ..+......+...+
T Consensus 231 ~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-~~~~~~~~~~~~~~ 308 (366)
T TIGR00886 231 ALLYSVTFGSFLG-VSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKL-LMSFLGVAMGAFLV 308 (366)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhH-HHHHHHHHHHHHHH
Confidence 5443322 21111 12333433322 245556677777788889999999999999999987643 33333333332221
Q ss_pred HhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHH
Q 013645 333 LINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCAS 392 (439)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g 392 (439)
.....++.+ .........+.++..+...+..++.+.++.|++++.+.|..+...++|
T Consensus 309 ~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 309 VLGLVSPLS---LAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HhcCCCcch---HHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 222221112 233333333344444445556777788888887777888777765543
No 50
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.92 E-value=2.2e-22 Score=202.79 Aligned_cols=345 Identities=11% Similarity=-0.005 Sum_probs=202.8
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-h----cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHH
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~----~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~ 139 (439)
.+.....+.+++++.|+++||+|||+++..+.++.++..... . .+++..+.+.|++.|++.+..++.....+.++
T Consensus 67 ~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~ 146 (438)
T TIGR00712 67 LSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHW 146 (438)
T ss_pred HHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHh
Confidence 455566777888999999999999999999887776654432 2 24566777889999999998888777777777
Q ss_pred hhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHH-HHHHhccCCCc
Q 013645 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT-ILMCFLRKEED 218 (439)
Q Consensus 140 ~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~-~~~~~l~~~~~ 218 (439)
. |+++||+++|++....++|..+++.+........ .+||.. |++.+++.++.. +..+++||+++
T Consensus 147 ~----------~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~----~~w~~~-f~~~~~~~~i~~~~~~~~~~~~~~ 211 (438)
T TIGR00712 147 W----------SQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF----NDWHAA-LYFPAICAIIVALFAFAMMRDTPQ 211 (438)
T ss_pred c----------CcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh----hhhHHH-HHHHHHHHHHHHHHHHHhccCCHH
Confidence 6 8899999999999999999988887655433211 258875 444455444433 33456676432
Q ss_pred cc---ccc---cc--cc--c-hhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccch
Q 013645 219 KG---EKE---TA--DA--S-VNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGV 286 (439)
Q Consensus 219 ~~---~~~---~~--~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 286 (439)
.. +.+ .+ +. + .+.+.+.++... .+.+++++++......++..........++|.++.+ .+++....
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~ 289 (438)
T TIGR00712 212 SCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFM--QYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKS 289 (438)
T ss_pred hcCCCCchhcccccccccccccccccchHHHHH--HHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhH
Confidence 11 000 00 00 0 000001111111 246788888876554333222211222345554432 35556667
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHH-HHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhh
Q 013645 287 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVV-FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ 365 (439)
Q Consensus 287 g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~ 365 (439)
+.....++++.++++++.|+++||.++++... .+....... ...+.....+..+ ........+.+|++.......
T Consensus 290 ~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~ 365 (438)
T TIGR00712 290 SWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGA-TGVFFMTLVTIAVIVYWMNPAGN---PLVDMICMIVIGFLIYGPVML 365 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcccH-HHHHHHHHHHHHHHHHHhcCCCc---hHHHHHHHHHHHHHHccHHHH
Confidence 88788888999999999999999986443222 232221111 1111111111111 122333334444432222222
Q ss_pred HHHHHHhhccCCc-hhhHHHHHHHHHHH-HHHHHHHh----hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 366 LSALLGILFKHDT-EGAFAQLKVWQCAS-IAVVFFIG----PYISLQAMLIVMVVGICVALVGILFLTIQV 430 (439)
Q Consensus 366 ~~a~~~~~~p~~~-~~a~s~~~~~~~~g-~~i~~~i~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
..+...+.+|++. +.+.|+++....+| .++++.+. ...++...++++++..+++.+..+++.+..
T Consensus 366 ~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 366 IGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred HHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3346778888764 55778777666554 34554333 233577777877777777777666555443
No 51
>PRK10054 putative transporter; Provisional
Probab=99.92 E-value=5.1e-22 Score=197.33 Aligned_cols=354 Identities=14% Similarity=0.103 Sum_probs=221.4
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhhhhHh-hhccCCCCchHHH----HHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHH
Q 013645 25 NYTRDVHILSCAFLLIFLAYGAAQNLET-TVNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (439)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~g~~~~----~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~ 99 (439)
+.+|+.+.+.++.++...++....+..+ .+.++.+.+.... +.......+++++.|+++||+|||+++.++.+..
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~ 83 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAF 83 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHH
Confidence 4556677777778887777766665444 3444445544333 3334455677889999999999999999998876
Q ss_pred HHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHH
Q 013645 100 WLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (439)
Q Consensus 100 ~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~ 178 (439)
.+..+. .+.++++.+++.|.+.|.+.+...++..++.+|.. |+++|++++|+.....++|.++|+.++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~g~~~~~~~lg~~igp~l~~ 153 (395)
T PRK10054 84 ASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNL----------SSTSKTKIFSLNYTMLNIGWTVGPPLGT 153 (395)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665443 35678887878888888887777777777777665 7789999999999999999999999988
Q ss_pred HhhcCCCCCCCCcchHHHHHHHHHHHHHHHH-HHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHH
Q 013645 179 AVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPL 257 (439)
Q Consensus 179 ~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 257 (439)
.+.. .+|+.. |....++.+++.+. .+++||++++++++ +++. .+.++.++||+++.....
T Consensus 154 ~l~~------~g~~~~-f~~~~~~~~i~~i~~~~~~~~~~~~~~~~-------~~~~-----~~~~~~~~~~~~~~~~~~ 214 (395)
T PRK10054 154 LLVM------QSINLP-FWLAAICSAFPLVFIQIWVQRSEKAIATE-------TGSV-----WSPSVLLQDKALLWFTCS 214 (395)
T ss_pred HHHH------hccCcH-HHHHHHHHHHHHHHHHHHHhccccccccc-------hhhh-----hhhhhhccCceehHHHHH
Confidence 8753 247764 44445555554433 34455432211111 0000 112456788888776554
Q ss_pred HHHhhHHHHH---HHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHh
Q 013645 258 FAYSGLQQAF---VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI 334 (439)
Q Consensus 258 ~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~ 334 (439)
.++....... +...+.....+.+.+....+.+...+++..+......|++.||.++|+. +..+..+.++.+. ..
T Consensus 215 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-l~~~~~~~~~~~~--~~ 291 (395)
T PRK10054 215 GFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPL-MTAGTLCFVIGLV--GF 291 (395)
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhH-HHHHHHHHHHHHH--HH
Confidence 3332222211 1122222221122333445666667777777777888999999987764 3455555554432 22
Q ss_pred hccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh----hhhHHHHH
Q 013645 335 NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAML 409 (439)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~ 409 (439)
....+ + .....++..++|++++...|..++++.+..|++.+ .+++..+ ...+|.++++.+.+ ..++...+
T Consensus 292 ~~~~~-~---~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~ 366 (395)
T PRK10054 292 IFSGN-S---LLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLF 366 (395)
T ss_pred HHcch-H---HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHH
Confidence 22222 1 23455678899999988888889999999998754 4666554 33456666665543 33455555
Q ss_pred HHHHHH
Q 013645 410 IVMVVG 415 (439)
Q Consensus 410 ~~~~~~ 415 (439)
+++++.
T Consensus 367 ~~~~~~ 372 (395)
T PRK10054 367 VILALA 372 (395)
T ss_pred HHHHHH
Confidence 444433
No 52
>PRK15075 citrate-proton symporter; Provisional
Probab=99.92 E-value=3.7e-22 Score=200.90 Aligned_cols=343 Identities=12% Similarity=0.056 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhccCCC-----CchHHH--HHH---HHHHHhhhhhHHHHHHHhchhHHHHHHhHHH
Q 013645 30 VHILSCAFLLIFLAYGAAQNLETTVNTEGN-----LGTISL--GIL---YTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (439)
Q Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~-----~g~~~~--~~~---~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~ 99 (439)
...+.++.++.+..+.......|.+.+|.+ .+.... ..+ +....+++++.|+++||+|||+++..+.+++
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~ 96 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIM 96 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHH
Confidence 334444445555555555566666655422 222211 111 1222467899999999999999999999988
Q ss_pred HHHHHhh-hcchhh--------HHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhh
Q 013645 100 WLFVAAN-LFPSWY--------TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ 170 (439)
Q Consensus 100 ~~~~~~~-~~~~~~--------~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~ 170 (439)
++..+.. ..+++. .+++.|+++|++.+..+++..++++|+. |+++||+++++.....+.|.
T Consensus 97 ~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~----------p~~~rg~~~~~~~~~~~~g~ 166 (434)
T PRK15075 97 ASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIA----------TPGRKGFYTSWQSASQQVAV 166 (434)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhC----------CcccchHHHHHHHHHHHHHH
Confidence 7766553 566655 4578999999999999988888998887 88999999999988888888
Q ss_pred hhhhHHHHHhhcCCC---CCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhc
Q 013645 171 FVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLA 247 (439)
Q Consensus 171 ~iG~~i~~~l~~~~~---~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (439)
.+|+.++..+..... ....+||..++. .++. . +..+++++..++.++..++. .+.+.++. .++..+
T Consensus 167 ~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~--~~~~--~-~~~~~~~~~~~e~~~~~~~~---~~~~~~~~---~~~~~~ 235 (434)
T PRK15075 167 VFAALLGYLLNQWLSPAQMAEWGWRIPFLI--GCLI--V-PFIFLIRRSLEETEEFLARK---HRPSMREI---FRSLAA 235 (434)
T ss_pred HHHHHHHHHHHHhCCHHHHhccchHHHHHH--HHHH--H-HHHHHHHHhcCCCHHHHHhh---hccccccH---HHHHHH
Confidence 888877776543211 013579874332 1111 1 12222332111110000000 00011111 112234
Q ss_pred cchhHHHHHHH-HHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHH
Q 013645 248 DVRMLLIIPLF-AYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQ 325 (439)
Q Consensus 248 ~~~~~~l~~~~-~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~ 325 (439)
+++.+...... +...........+.|.++.+ .+++..+.+.....++++.++++++.|+++||++||+.++ .+..+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~-~~~~~~ 314 (434)
T PRK15075 236 NWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLI-AFTVLA 314 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH-HHHHHH
Confidence 44444332221 11111111222344444432 3555556777777889999999999999999999887543 333332
Q ss_pred HHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHH-HHHHHHHHHHHHH
Q 013645 326 VVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQ-LKVWQCASIAVVF 397 (439)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~-~~~~~~~g~~i~~ 397 (439)
.+...........+.+ .........+.+++.+...+..+.+..|.+|++.+ .+.+. ++..+.++..+++
T Consensus 315 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p 385 (434)
T PRK15075 315 ILTAYPALSWLVAAPS---FARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTP 385 (434)
T ss_pred HHHHHHHHHHHHcCCc---hHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHH
Confidence 2211111111111221 12222334445566666777777889999998865 45564 3444444333333
No 53
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=99.92 E-value=2.4e-24 Score=196.63 Aligned_cols=348 Identities=35% Similarity=0.507 Sum_probs=261.4
Q ss_pred CCcCccccccccccccc---CccccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHHHHHHHHHHHhhhhhHHH
Q 013645 5 DSRDEEAPLVADSLQVL---TPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASL 81 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~g~ 81 (439)
+-+++++|..-++...- .++...||++++++++++.+.+|...+++|..++. ++|..+++..|.....++++.+.
T Consensus 3 ~~~~~~~~~~s~~~~~~~~r~~~~~~knv~i~s~~fl~~f~a~~gl~nlq~~vn~--~lg~~sl~~~y~~l~~s~m~~~~ 80 (390)
T KOG3097|consen 3 LVGAYPNYNESEEEERRYRRKRLGILKNVLILSIAFLLTFTAYLGLQNLQTSVNY--DLGTVSLGALYLSLIDSSMFMPL 80 (390)
T ss_pred ccccccCCCCCCcccchhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc--CcccchhhhhhHHHHHHHHHHHH
Confidence 34556666655544222 23348999999999999999999999999998886 78888999999999999999999
Q ss_pred HHHHhchhHHHHHHhHHHHHHHHhhhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhc-CCCcccchhhhhH
Q 013645 82 VVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH-KLHEGTVIGSFNG 160 (439)
Q Consensus 82 l~dr~G~r~~l~~g~~~~~~~~~~~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~-~~~~~~~rg~~~g 160 (439)
+.+++|.|++++++...|..+.+.+..|.+..++.+...+|+|.++.|.+.++|++++.++++.++ +...+..+.+..|
T Consensus 81 ~Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~~~~~ffg 160 (390)
T KOG3097|consen 81 LIRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDGMKVRFFG 160 (390)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCceeeeehh
Confidence 999999999999999999999999999999999999999999999999999999999999987655 2333444578999
Q ss_pred HHHHHHHHhhhhhhHHHHHhhc---CC----C------C--------C--CCCcch--------HHHHHHHHHHHHHHHH
Q 013645 161 EFWGMFASHQFVGNLITLAVLK---DD----K------G--------G--STSGTT--------LLFIVFLGVITLGTIL 209 (439)
Q Consensus 161 ~~~~~~~~G~~iG~~i~~~l~~---~~----~------~--------~--~~~w~~--------~~~~~~~~~~~l~~~~ 209 (439)
.+++++..+...|+.++..+.. +. . + + ..+.+. ..=.++..++++..++
T Consensus 161 ~Ffii~~~~qv~gn~issli~~~~~~~~~~~sn~t~~~~CG~~f~~~g~~a~~nlt~p~~~~~lvls~i~L~c~via~~~ 240 (390)
T KOG3097|consen 161 EFFIIFQCAQVWGNLISSLIMTLFLHGALSGSNLTFSVECGANFCGSGDKAEGNLTLPPSYVILVLSLIFLPCMVIAVLI 240 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCccceeeeecccccCCccccccCCccCCCCCceEEeeHHHHHHHHHHHHH
Confidence 9999999999999888765532 10 0 0 0 000000 0001233333333333
Q ss_pred HH-hc---cCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccc
Q 013645 210 MC-FL---RKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSG 285 (439)
Q Consensus 210 ~~-~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 285 (439)
.. ++ +++.++. ..+ ....+.+.-..+.++|+|+..+.|...+.|.+++|..+.+++.+..++.+.+.
T Consensus 241 ~~~~~~~l~r~~~~r---~~~------~~~l~i~~l~~~~l~~~r~~llvP~tif~GleqaF~~~~fTk~~V~c~~Gv~~ 311 (390)
T KOG3097|consen 241 MLFFLGALKRYGEKR---LAS------VSGLNIFQLTFKHLRDIRLRLLVPLTIFSGLEQAFLCADFTKAYVACALGVSR 311 (390)
T ss_pred HHHHHHHHhhhhhhh---hhc------ccccchHHHHHHHhcCcceeeeehhhhhhHHHHHHHHhhhhhhhhhhhhhHHH
Confidence 22 22 1111111 000 01112233456778999999999999999999999999999888788899999
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhh
Q 013645 286 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ 365 (439)
Q Consensus 286 ~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~ 365 (439)
+|+.+..++++..+.+.+.|-|..+++|.. ....+.+.+..... ..+.|.+.++ +.+..++...+||.+|+.+++.
T Consensus 312 igf~m~cfgv~~Av~S~~~g~L~~~~gr~~-~~v~gavv~l~li~-~~~~w~~~~~--~~~i~y~~aalwgv~d~vw~t~ 387 (390)
T KOG3097|consen 312 IGFAMACFGVGDAVASSLFGLLGKWIGRPP-LLVLGAVVHLLLIT-ILFFWAPNPQ--DSWIFYVAAALWGVGDAVWKTQ 387 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCcc-HHHHHHHHHHHHHH-HHHhcccCCC--CceEEEeehhhcCccHHHHHhh
Confidence 999999999999999999999999999764 55677776654322 3456776653 2466889999999999999876
Q ss_pred HH
Q 013645 366 LS 367 (439)
Q Consensus 366 ~~ 367 (439)
++
T Consensus 388 in 389 (390)
T KOG3097|consen 388 IN 389 (390)
T ss_pred cC
Confidence 54
No 54
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.92 E-value=1.3e-21 Score=194.54 Aligned_cols=320 Identities=14% Similarity=0.081 Sum_probs=188.9
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhhhHhhhcc-CCCCchHH----HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHH
Q 013645 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNT-EGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (439)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~ 100 (439)
.+|+++...+++...|........+.+.+.+ |.++.... .++....++++.++.|++.||+|.|+++.++.+..+
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 5578888888888888888777776666654 45555432 445666778888999999999999999999999877
Q ss_pred HHHHhh-hc-----chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhh
Q 013645 101 LFVAAN-LF-----PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN 174 (439)
Q Consensus 101 ~~~~~~-~~-----~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~ 174 (439)
+.++.. .. +++..+++.|++.|++ +..+++....+++++ |+++||+++|++....++|..+++
T Consensus 112 i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wf----------p~~~rG~A~Gi~~g~G~~G~~l~~ 180 (462)
T PRK15034 112 IPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFF----------PKAKQGSALGINGGLGNLGVSVMQ 180 (462)
T ss_pred HHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHC----------CHhHhHHHHHHHHHHHhhHHHHHH
Confidence 765543 33 7899999999999998 667888777787776 888999999999777777877666
Q ss_pred HHHHHhh-----cCCC--------CCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHH
Q 013645 175 LITLAVL-----KDDK--------GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKS 241 (439)
Q Consensus 175 ~i~~~l~-----~~~~--------~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (439)
++...+. .... .+..+|+.. .++..++.++..++.++..+++++.+ .+ .++
T Consensus 181 ~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~-~~~~~~~~iv~~i~~~~~~~~~~~~~-----------~~----~~~ 244 (462)
T PRK15034 181 LVAPLVIFVPVFAFLGVNGVPQADGSVMSLANA-AWIWVPLLAIATIAAWSGMNDIASSR-----------AS----IAD 244 (462)
T ss_pred HHHHHHHHHHHHHHhccccccccccchHHHHHH-HHHHHHHHHHHHHHHHHhCCCccccc-----------cC----HHH
Confidence 5543322 1110 012235553 33344444444444444433221100 01 123
Q ss_pred HHHhhccchhHHHHHHHHH-hhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhh
Q 013645 242 ITTLLADVRMLLIIPLFAY-SGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSG 320 (439)
Q Consensus 242 ~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~ 320 (439)
..+.+|+|+.|.+....+. .|...++ ..++|.+..+ .++............+...+.++++|+++||+|+++.+ ..
T Consensus 245 ~~~vlk~~~~Wllslly~~tFG~fvg~-s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl-~~ 321 (462)
T PRK15034 245 QLPVLQRLHLWLLSLLYLATFGSFIGF-SAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVT-LI 321 (462)
T ss_pred HHHHhCCCchhHHHHHHHHHHHHHHHH-HHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHH-HH
Confidence 4568899999988765432 2221222 1133333221 22211121122234566778889999999999988744 44
Q ss_pred HHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccC
Q 013645 321 GAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH 376 (439)
Q Consensus 321 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~ 376 (439)
+.+...++....+...+++... ......+......++.+..+...+.++.+++|+
T Consensus 322 ~~i~~~i~~~~~~l~lp~~~~~-~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~ 376 (462)
T PRK15034 322 NFIFMAIFSALLFLTLPGTGSG-NFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQ 376 (462)
T ss_pred HHHHHHHHHHHHHHHhcccccc-HHHHHHHHHHHHHHHhcccchHHHHhhHHHHhh
Confidence 4444333221112222222110 012222222222334444455566677777774
No 55
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=5.5e-23 Score=205.97 Aligned_cols=239 Identities=16% Similarity=0.098 Sum_probs=175.8
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHh
Q 013645 62 TISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (439)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~ 140 (439)
....+++|..|+++.++++.+.||++..+.+....++++++.+. ...+|++.+++.|++.|+.++..||+...+++.+.
T Consensus 84 ~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy 163 (495)
T KOG2533|consen 84 GVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWY 163 (495)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhc
Confidence 34678999999999999999999999999999999999888754 46899999999999999999999999999998887
Q ss_pred hhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCC-CCCCCcchHHHHHHHHHHHH-HHHHHHhccC-CC
Q 013645 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK-GGSTSGTTLLFIVFLGVITL-GTILMCFLRK-EE 217 (439)
Q Consensus 141 ~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~-~~~~~w~~~~~~~~~~~~~l-~~~~~~~l~~-~~ 217 (439)
.+++||+.+|++++..++|.++|++++..+.+..+ .+..+||+. |++-++++++ +++.++++|+ |.
T Consensus 164 ----------~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~-FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 164 ----------GKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWL-FIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred ----------ChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceee-hhHHHHHHHHHHheEEEEecCChh
Confidence 77899999999999999999999999998755222 234689984 6666666654 4444567776 43
Q ss_pred cc---ccccc------cccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccchH
Q 013645 218 DK---GEKET------ADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVG 287 (439)
Q Consensus 218 ~~---~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g 287 (439)
+. +++|. .++++......+.+.+..+++++||++|...+..++..........+.|.++.+ .+++..+..
T Consensus 233 ~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~ 312 (495)
T KOG2533|consen 233 KAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQAN 312 (495)
T ss_pred hccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhc
Confidence 21 11110 010110000000123456789999999998887776666544333455544443 224445667
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcCC
Q 013645 288 GAMAVYGAFDAICSLAAGRLTTGL 311 (439)
Q Consensus 288 ~~~~~~~i~~~ig~~~~G~l~d~~ 311 (439)
.+.+.+.++.+++.++.|.++||.
T Consensus 313 ~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 313 LLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred cccchHHhhhHHHHHHHHHHHHHH
Confidence 777888999999999999999994
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.91 E-value=3.4e-21 Score=191.24 Aligned_cols=320 Identities=12% Similarity=0.052 Sum_probs=192.1
Q ss_pred hhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-hcchhhHHHHHHHHhhh
Q 013645 49 NLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGF 123 (439)
Q Consensus 49 ~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~i~Gi 123 (439)
...|.+.++.+.+.. ..+.....+.+++++.|+++||+|||+++..+.+.+.+..... ..+++..+++.|+++|+
T Consensus 24 ~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~ 103 (392)
T PRK10473 24 VGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGI 103 (392)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 344444444344332 2344455667788999999999999999999988777655543 56788888889999999
Q ss_pred HHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHH
Q 013645 124 AASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVI 203 (439)
Q Consensus 124 g~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~ 203 (439)
+.+..++...+++.+.. |+++|+++.|+......+|..+|+.++..+... .+|+.. |.+..++.
T Consensus 104 ~~~~~~~~~~~~i~~~~----------~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~-----~g~~~~-~~~~~~~~ 167 (392)
T PRK10473 104 GAGCCYVVAFAILRDTL----------DDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK-----FPWQSL-FYTMAAMG 167 (392)
T ss_pred hhhHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----cChHHH-HHHHHHHH
Confidence 99998888888888886 788999999999998899999999888776543 358764 44444444
Q ss_pred HHHHHH-HHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhh-cccc
Q 013645 204 TLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPAL 281 (439)
Q Consensus 204 ~l~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~-~~~~ 281 (439)
++..+. ..++||++++++++ + .+.. ++.++.+++++++....................+..+. +.+.
T Consensus 168 ~i~~~~~~~~~~~~~~~~~~~--~------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 236 (392)
T PRK10473 168 ILVLLLSLFILKETRPARAPA--A------SSKP---RENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGF 236 (392)
T ss_pred HHHHHHHHHHcCCCCCcccCC--c------cchH---HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCC
Confidence 444433 34566643321111 0 0001 12335567777665433322111111111122232221 2345
Q ss_pred cccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhh
Q 013645 282 GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV 361 (439)
Q Consensus 282 ~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 361 (439)
+....+......+++.++++++.+++.||+++|+. ...+.++..++... +...++. ........+.+.+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~-~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~l~~~g~~~ 308 (392)
T PRK10473 237 SRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTL-MLTSQVLFLAAGIT--LALSPSH-----AVSLFGITLICAGFSV 308 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH-HHHHHHHHHHHHHH--HHHHHHH-----HHHHHHHHHHHHHHHH
Confidence 55567888888999999999999999999998764 34555544433321 1222221 2222333333333322
Q ss_pred hhhhHHHHHHhhccCCch-h-hHHHHHHHHHHHHHHHHHHhhhhhH
Q 013645 362 LNTQLSALLGILFKHDTE-G-AFAQLKVWQCASIAVVFFIGPYISL 405 (439)
Q Consensus 362 ~~~~~~a~~~~~~p~~~~-~-a~s~~~~~~~~g~~i~~~i~~~~~~ 405 (439)
..+. ....++.|++++ + +.+...+.+.+|..++..+....++
T Consensus 309 ~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~~~g~ 352 (392)
T PRK10473 309 GFGV--AMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVLGI 352 (392)
T ss_pred HhHH--HHHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2222 223344554432 2 4567777777787776655554443
No 57
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.91 E-value=2.9e-21 Score=190.13 Aligned_cols=351 Identities=15% Similarity=0.052 Sum_probs=209.5
Q ss_pred HHHHHHHhhhhhhHhh-hccCCCCchHHHHHHHH----HHHhhhhhHHHHHHHhchhHHHHH-HhHHHHHHHHh-hhcch
Q 013645 38 LLIFLAYGAAQNLETT-VNTEGNLGTISLGILYT----SFTCFSLVASLVVRVLGSKNALIL-GTTGYWLFVAA-NLFPS 110 (439)
Q Consensus 38 ~~~~~~~~~~~~~~~~-l~~~~~~g~~~~~~~~~----~~~~~~~~~g~l~dr~G~r~~l~~-g~~~~~~~~~~-~~~~~ 110 (439)
++...+.....+..+. +.++.+.+....+.... ...+.+++.|+++||+||||.+.. +.+...+.... ...++
T Consensus 7 ~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 86 (375)
T TIGR00899 7 FLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRN 86 (375)
T ss_pred HHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcch
Confidence 3344444444444343 34444544443333333 345677889999999999987665 44444443333 35688
Q ss_pred hhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhh--hHHHHHHHHHhhhhhhHHHHHhhcCCCCCC
Q 013645 111 WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSF--NGEFWGMFASHQFVGNLITLAVLKDDKGGS 188 (439)
Q Consensus 111 ~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~--~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~ 188 (439)
++.+++.|++.|.+.+...+...++..+.. |+++|++. .+......++|.++|+.++..+.+.
T Consensus 87 ~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~----- 151 (375)
T TIGR00899 87 YFLLLVLGVLLSSFASTANPQLFALAREHA----------DRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG----- 151 (375)
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHh----------hhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh-----
Confidence 888888899998887777777666666654 44555543 5777777889999999988887643
Q ss_pred CCcchHHHHHHHHHHHHHHHHH-HhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHH
Q 013645 189 TSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAF 267 (439)
Q Consensus 189 ~~w~~~~~~~~~~~~~l~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ 267 (439)
.+||.. |++.+++.++..+.. +++||++++++++ + +.. +..+.+++|+++.+....+........
T Consensus 152 ~~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (375)
T TIGR00899 152 FGFTVM-FLTAALAFVLCGVLVWLFLPSYPRGAPGA--L----TRL-------EVRGLLASRDTRLLFVACTLMWGCNIL 217 (375)
T ss_pred cccHHH-HHHHHHHHHHHHHHHHHhCCCcccCcccc--c----Ccc-------hhhhhhcCcchHHHHHHHHHHHHHHHH
Confidence 358874 444455444444433 4467643321111 0 000 111245666665543322211111111
Q ss_pred HHhhcchhhh-cccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchH
Q 013645 268 VWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTL 346 (439)
Q Consensus 268 ~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (439)
....++.++. +.+.+.++.+.......+..+++.++.|++.||+++|+.+ ..+.+...+.+. .....++ .+
T Consensus 218 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-~~~~~~~~~~~~--~~~~~~~-----~~ 289 (375)
T TIGR00899 218 YIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLM-LLAALAGVAFYT--GLAADNS-----LW 289 (375)
T ss_pred HHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHH-HHHHHHHHHHHH--HHHHHHH-----HH
Confidence 1223333332 2345555677766666667788889999999999988743 344444333322 1222222 23
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHH
Q 013645 347 YPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVG 422 (439)
Q Consensus 347 ~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~~~~~~~~ 422 (439)
...+...+.|++.+...+..+++..+..|++++.+.+.++...++|..+++.+.+. .++...++..++..+++.+.
T Consensus 290 ~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 369 (375)
T TIGR00899 290 ALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFC 369 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Confidence 44556677788887778888889999999877777888888887888777655543 35667777777777777666
Q ss_pred HHH
Q 013645 423 ILF 425 (439)
Q Consensus 423 ~~~ 425 (439)
+.+
T Consensus 370 ~~~ 372 (375)
T TIGR00899 370 LLL 372 (375)
T ss_pred Hhe
Confidence 543
No 58
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.91 E-value=2.7e-21 Score=197.90 Aligned_cols=368 Identities=14% Similarity=0.063 Sum_probs=210.9
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHH
Q 013645 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (439)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~ 100 (439)
+.++.+..+.++.++....+.....+.+.+.++.+.+.. ..+..+....+++++.|+++||+|||+++..+.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 96 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS 96 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 444566666666666555655555556666555555432 3445556667888999999999999999999988776
Q ss_pred HHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHH
Q 013645 101 LFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (439)
Q Consensus 101 ~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~ 179 (439)
+..+. ...+++..+++.|++.|++.+..++...+++.+.. |+++|++++++.....++|..+|+.+...
T Consensus 97 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 166 (496)
T PRK03893 97 VGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESW----------PKHLRNKASGFLISGFSIGAVVAAQVYSL 166 (496)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65544 35678888999999999999999888888888887 78899999999999999999999988887
Q ss_pred hhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhh--H--HHHHHH----------HHHh
Q 013645 180 VLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSY--L--VSLSKS----------ITTL 245 (439)
Q Consensus 180 l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~----------~~~~ 245 (439)
+..+ .+||+.++ +..+..++..+....+||+++.++++..+.+..+..+ . ++.... ....
T Consensus 167 l~~~-----~~w~~~f~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (496)
T PRK03893 167 VVPV-----WGWRALFF-IGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFC 240 (496)
T ss_pred Hhcc-----CCHHHHHH-HHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHH
Confidence 7543 36887433 2122111221112234443221111100000000000 0 000000 0000
Q ss_pred hcc--chhH-------------------------H---HHHHHHHhhHHHH-HHHhhcchhhh-cccccccchHHHHHHH
Q 013645 246 LAD--VRML-------------------------L---IIPLFAYSGLQQA-FVWAEFTKEIV-TPALGVSGVGGAMAVY 293 (439)
Q Consensus 246 ~~~--~~~~-------------------------~---l~~~~~~~g~~~~-~~~~~~~~~~~-~~~~~~~~~g~~~~~~ 293 (439)
+.. +..+ . ......+...... .....+|.++. +.+.+.++.+.+....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~ 320 (496)
T PRK03893 241 FAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFS 320 (496)
T ss_pred HHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 000 0000 0 0000000000000 01123344442 3456666788888899
Q ss_pred HHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhh
Q 013645 294 GAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL 373 (439)
Q Consensus 294 ~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~ 373 (439)
.++.++++++.|+++||+++|+.+ ..+..+..+.... . ....+.. ........++.+.......+..++++.+.
T Consensus 321 ~~~~~~g~~~~g~l~dr~g~~~~~-~~~~~~~~~~~~~-~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (496)
T PRK03893 321 GFGAAVGCCVGGFLGDWLGTRKAY-VCSLLISQLLIIP-V-FAIGGAN---VWVLGLLLFFQQMLGQGISGLLPKLIGGY 394 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcchHHH-HHHHHHHHHHHHH-H-hhccccH---HHHHHHHHHHHHHHhcccchhhHHHHHhh
Confidence 999999999999999999988643 3444433332221 1 1221211 12222333333333333456677889999
Q ss_pred ccCCc-hhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHH
Q 013645 374 FKHDT-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVV 414 (439)
Q Consensus 374 ~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~ 414 (439)
+|+++ ++++|+++....+|..+++.+.+. .++...+....+
T Consensus 395 ~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~ 440 (496)
T PRK03893 395 FDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSF 440 (496)
T ss_pred CCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHH
Confidence 98775 457788777777887777766543 345555544443
No 59
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.91 E-value=2.1e-22 Score=197.73 Aligned_cols=342 Identities=12% Similarity=-0.001 Sum_probs=206.1
Q ss_pred HHHHHHhhhhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhH
Q 013645 39 LIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYT 113 (439)
Q Consensus 39 ~~~~~~~~~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~ 113 (439)
+.+..........+.+.++.+.... ..++......+++++.|+++||+|||+++..+.++..+..+. ...++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (379)
T TIGR00881 6 AYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWV 85 (379)
T ss_pred HHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHH
Confidence 3334444444445555444333332 345556667788899999999999999999999887776554 35678888
Q ss_pred HHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhh-HHHHHhhcCCCCCCCCcc
Q 013645 114 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN-LITLAVLKDDKGGSTSGT 192 (439)
Q Consensus 114 li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~-~i~~~l~~~~~~~~~~w~ 192 (439)
+++.|++.|++.+..++...++++++. |+++|++++|+.....++|..+|+ .++..+... .+||
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~ 150 (379)
T TIGR00881 86 MAALWALNGIFQGMGWPPCGRTVTKWF----------SRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-----YSWH 150 (379)
T ss_pred HHHHHHHHHhhccccCCchHHHHHHhc----------CHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-----CCch
Confidence 999999999999999999888888887 788999999999999999999998 455555432 3587
Q ss_pred hHHHHHHHHHHHHHHH-HHHhccCCCcccc---ccc--ccc---c-hhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhh
Q 013645 193 TLLFIVFLGVITLGTI-LMCFLRKEEDKGE---KET--ADA---S-VNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSG 262 (439)
Q Consensus 193 ~~~~~~~~~~~~l~~~-~~~~l~~~~~~~~---~~~--~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 262 (439)
.. |++..++.++..+ ..++.||++++++ ++. .++ + ..++++.+.......+.+++|.++.+....+...
T Consensus 151 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (379)
T TIGR00881 151 WV-FIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVY 229 (379)
T ss_pred hH-HHHHHHHHHHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHH
Confidence 74 4444444443333 3344555332110 000 000 0 0000000001112345668888876655433333
Q ss_pred HHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhh-HH-HHHHHHHHHHHhhccCC
Q 013645 263 LQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSG-GA-IAQVVVFLWILINYSVT 339 (439)
Q Consensus 263 ~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~-g~-~~~~~~~~~~~~~~~~~ 339 (439)
........+.+.++.+ .+.+.++.+......+++.++++++.|++.||..+|+..... .. ....++.. .....+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 307 (379)
T TIGR00881 230 VVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLL--VYWLNPA 307 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH--HHhcCcc
Confidence 2222222334433322 345556778888889999999999999999985433222111 11 11111111 1112112
Q ss_pred CCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhh
Q 013645 340 SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP 401 (439)
Q Consensus 340 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~ 401 (439)
.+ .....++.++.|+......+..+.+..+.+|++. +.+.|+++....+|..+++.+.+
T Consensus 308 ~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 367 (379)
T TIGR00881 308 AN---PLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLG 367 (379)
T ss_pred hh---HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHH
Confidence 11 2334455566666555556666778899998775 45788888888888877765543
No 60
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.91 E-value=1.4e-20 Score=191.95 Aligned_cols=328 Identities=13% Similarity=0.059 Sum_probs=200.8
Q ss_pred hhhhhHHHHHHHh-----chhHH-HHHHhHHHHHHHHh--hh--cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhh
Q 013645 74 CFSLVASLVVRVL-----GSKNA-LILGTTGYWLFVAA--NL--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (439)
Q Consensus 74 ~~~~~~g~l~dr~-----G~r~~-l~~g~~~~~~~~~~--~~--~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~ 143 (439)
+.+++.|+++||+ |||+. +..+.+..++.... .. .++++.+.+.+++.|++.+...+...++.+|+.
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~--- 136 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVL--- 136 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 6889999999999 99986 55666655444332 22 246777888899999999999888889998887
Q ss_pred hhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCcccccc
Q 013645 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKE 223 (439)
Q Consensus 144 a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~ 223 (439)
|+++||++.++...+..+|.++|+.++..+..+. .+||.. |.+.+++.++..+..+++||++++++++
T Consensus 137 -------~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~----~GWr~~-f~i~a~l~ll~~l~~~~~~e~~~~~~~~ 204 (491)
T PRK11010 137 -------PAEERGAGAAISVLGYRLAMLVSGGLALWLADRY----LGWQGM-YWLMAALLIPCIIATLLAPEPTDTIPVP 204 (491)
T ss_pred -------ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----cCHHHH-HHHHHHHHHHHHHHHHhcCCCccccccc
Confidence 7899999999999999999999998887776421 369875 4444555555555555677764321111
Q ss_pred ccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhh-cccccccchHHHHH-HHHHHHHHHH
Q 013645 224 TADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMA-VYGAFDAICS 301 (439)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~-~~~i~~~ig~ 301 (439)
+ +..++.. .+.++.+++++.+......+.......+...+.++++. ..+++.++.+.+.. ...++.++|.
T Consensus 205 --~---~~~~~~~---~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ 276 (491)
T PRK11010 205 --K---TLEQAVV---APLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGA 276 (491)
T ss_pred --c---chhhhHH---HHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 0001111 23345566777665443333222222222233333332 24566677887764 4457889999
Q ss_pred HhhhhhhcCCCCcceehhhHHHHHHHHH-HHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-h
Q 013645 302 LAAGRLTTGLPSITFIVSGGAIAQVVVF-LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-E 379 (439)
Q Consensus 302 ~~~G~l~d~~~~r~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~ 379 (439)
++.|++.||+++|+.++ .+.++.++.. .+.......+ + ...+....++..++.+...+...++..++.|++. +
T Consensus 277 ll~G~L~dr~g~~~~l~-i~~~l~~l~~l~~~~l~~~~~-~---~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~ 351 (491)
T PRK11010 277 LYGGILMQRLSLFRALM-IFGILQGVSNAGYWLLSITDK-N---LYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSA 351 (491)
T ss_pred HHHHHHHHHHhHHHHHH-HHHHHHHHHHHHHHHHHhccc-c---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence 99999999999776443 3333322221 1111122211 1 1223334444333334444556777888887764 4
Q ss_pred hhHHHHHHHHHHHHHHHHHHh----hhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 380 GAFAQLKVWQCASIAVVFFIG----PYISLQAMLIVMVVGICVALVGILFLTIQ 429 (439)
Q Consensus 380 ~a~s~~~~~~~~g~~i~~~i~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (439)
+.++.++...++|..++..+. ...++...+.+.+++.+++.+...++..+
T Consensus 352 t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 352 TQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 567888777777765432222 23367777777777777777777666443
No 61
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.90 E-value=8.6e-22 Score=194.47 Aligned_cols=305 Identities=14% Similarity=0.068 Sum_probs=186.7
Q ss_pred HhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-hcchhh--------HHHHHHHHhhhHHHHHHhhhhhHHHHHhhhh
Q 013645 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWY--------TMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (439)
Q Consensus 73 ~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~~~~~~--------~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~ 143 (439)
.+++++.|+++||+|||+++..+.+++.+..... ..+++. .+++.|+++|++.+..+++..++++|+.
T Consensus 49 ~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~--- 125 (394)
T TIGR00883 49 PLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYA--- 125 (394)
T ss_pred hhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcC---
Confidence 4688999999999999999999998877755543 445543 4778999999999999988888888886
Q ss_pred hhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCC---CCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccc
Q 013645 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKG 220 (439)
Q Consensus 144 a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~---~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 220 (439)
|+++|++..++......+|..+|+.++..+..... ....+||.. |++..++.++.......++|+++.+
T Consensus 126 -------~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (394)
T TIGR00883 126 -------PPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIP-FLVSAVLVLIGLYLRRNLEETPVFE 197 (394)
T ss_pred -------CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHH-HHHHHHHHHHHHHHHHhcCCChhHH
Confidence 78999999999999999999999887765532111 013468764 3333443333333333445433211
Q ss_pred cccccccchhhhhhHHHHHHHHHHhhccch--hHHHHHHHHHhhHHHHHHHhhcchhhh-cccccccchHHHHHHHHHHH
Q 013645 221 EKETADASVNFYSYLVSLSKSITTLLADVR--MLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFD 297 (439)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~ 297 (439)
+++.++ .+... +..+.+++++ ++......+...........+.+.++. ..+.+.++.+.......++.
T Consensus 198 ~~~~~~--~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 268 (394)
T TIGR00883 198 KAQEKH--KKKRG-------PIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILF 268 (394)
T ss_pred HHHhcc--ccccC-------CHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHH
Confidence 111000 00111 1223344444 444333323222222222233444332 23455566777778888999
Q ss_pred HHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCC
Q 013645 298 AICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD 377 (439)
Q Consensus 298 ~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~ 377 (439)
.+++++.|+++||+++|+.+...+.+.....+.. ......+.+ ........++.|++.+...+..++.+.|.+|++
T Consensus 269 ~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 344 (394)
T TIGR00883 269 FITIPLSGALSDRIGRRPVLIIFTVLAALLAVPL-LMALLDSGS---FTLFFFLVLGLALIGGMYTGPMGSFLPELFPTE 344 (394)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH-HHHHhcCCc---hHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCcc
Confidence 9999999999999998874432322222222111 111221112 244556677788888888889999999999987
Q ss_pred ch-hhHHH-HHHHHHHHHHHHHHHhh
Q 013645 378 TE-GAFAQ-LKVWQCASIAVVFFIGP 401 (439)
Q Consensus 378 ~~-~a~s~-~~~~~~~g~~i~~~i~~ 401 (439)
.+ .+.+. ++....+|..+++.+.+
T Consensus 345 ~~~~~~~~~~~~~~~~g~~~~p~~~g 370 (394)
T TIGR00883 345 VRYTGASLAYNLAGAIFGGFAPYIAA 370 (394)
T ss_pred ceeeEeeehhHhHHHHHhhHHHHHHH
Confidence 54 45664 45555556655554443
No 62
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.90 E-value=2.2e-21 Score=198.90 Aligned_cols=345 Identities=13% Similarity=-0.012 Sum_probs=191.4
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcch------hhHHHHHHHHhhhHHHHHHhhhhhHHH
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPS------WYTMVPASLYLGFAASIIWVGEGTYLT 137 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~------~~~li~~r~i~Gig~g~~~~~~~~~i~ 137 (439)
.+....+..+++++.|+++||+|||+++..+.+++.+..+. ...++ +..+++.|++.|++.|..++....+++
T Consensus 62 ~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 141 (502)
T TIGR00887 62 NGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITS 141 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 44555667789999999999999999999998877665543 23333 677889999999999999999999999
Q ss_pred HHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCC------------------CCCCCcchHHHHHH
Q 013645 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK------------------GGSTSGTTLLFIVF 199 (439)
Q Consensus 138 ~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~------------------~~~~~w~~~~~~~~ 199 (439)
|++ |+++||+++++......+|..+|+.++..+..... ....+||..+ .+.
T Consensus 142 e~~----------p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~-~~~ 210 (502)
T TIGR00887 142 EFA----------TKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILI-GFG 210 (502)
T ss_pred Hhc----------ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHH-HHH
Confidence 998 89999999999999999999999888765532110 0013688743 333
Q ss_pred HHHHHHHHHHHHhccCCCc----cccc-c-cc---------c-cchhhh-hhH----HHHHHHHHHhhcc---chhHHHH
Q 013645 200 LGVITLGTILMCFLRKEED----KGEK-E-TA---------D-ASVNFY-SYL----VSLSKSITTLLAD---VRMLLII 255 (439)
Q Consensus 200 ~~~~~l~~~~~~~l~~~~~----~~~~-~-~~---------~-~~~~~~-~~~----~~~~~~~~~~~~~---~~~~~l~ 255 (439)
.+..++..+..+++||+++ ++++ + .. + .+...+ .+. ++...++++++++ ++.+...
T Consensus 211 ~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 290 (502)
T TIGR00887 211 AVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHL 290 (502)
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHH
Confidence 3333344444467888643 1111 1 00 0 000000 000 0000122233321 2221111
Q ss_pred H--HHHHhhHHHHHH-H-hhcchhhhcccccccch-----------HH-HHHHHHHHHHHHHHhhhhhhcCCCCcceehh
Q 013645 256 P--LFAYSGLQQAFV-W-AEFTKEIVTPALGVSGV-----------GG-AMAVYGAFDAICSLAAGRLTTGLPSITFIVS 319 (439)
Q Consensus 256 ~--~~~~~g~~~~~~-~-~~~~~~~~~~~~~~~~~-----------g~-~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~ 319 (439)
. ...+.+....++ . .+.|..+.+.+++.... .. ...+..++.+++.++.+++.||+|||+.+ .
T Consensus 291 ~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l-~ 369 (502)
T TIGR00887 291 LGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ-L 369 (502)
T ss_pred HHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH-H
Confidence 1 111111111111 1 12333232223322211 11 12344556677888999999999998744 3
Q ss_pred hHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHH
Q 013645 320 GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFF 398 (439)
Q Consensus 320 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~ 398 (439)
.+..+..++...+.....+... ........+...++.....+..+.+.+|++|++.+ .+.|+.+....++.++++.
T Consensus 370 ~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~ 446 (502)
T TIGR00887 370 MGFFILTVLFFVLGFAYNHLST---HGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQF 446 (502)
T ss_pred HHHHHHHHHHHHHHHHHHhcch---hHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHH
Confidence 4554444332211111111110 01111111111122223455677888999998865 5788888888888777655
Q ss_pred Hhhhh--------------hHHHHHHHHHHHHHHHHHHHH
Q 013645 399 IGPYI--------------SLQAMLIVMVVGICVALVGIL 424 (439)
Q Consensus 399 i~~~~--------------~~~~~~~~~~~~~~~~~~~~~ 424 (439)
+.++. ++...++++++.++++++.++
T Consensus 447 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~ 486 (502)
T TIGR00887 447 GFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTL 486 (502)
T ss_pred HhhhhhccccccccccccccchHHHHHHHHHHHHHHHHhe
Confidence 44322 123455666666666665543
No 63
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.90 E-value=1.3e-20 Score=211.75 Aligned_cols=315 Identities=15% Similarity=0.128 Sum_probs=204.7
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh----hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHh
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA----NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~----~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~ 140 (439)
.+++...+.++++++|+++||+|||+++.++.++..+..+. ...++++.+++.|++.|++.+..+++..++++++.
T Consensus 53 ~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 132 (1146)
T PRK08633 53 NALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELV 132 (1146)
T ss_pred HHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhc
Confidence 44556667788999999999999999999988765444332 23467888999999999999999999999999987
Q ss_pred hhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCC----CCCCCCcchHHHHHHHHHHHHHHHHHHhccCC
Q 013645 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD----KGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (439)
Q Consensus 141 ~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~----~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~ 216 (439)
|+++|++++|+...+.++|.++|+++++.+.... .+...+|++.+++......++++++.+++|+.
T Consensus 133 ----------~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (1146)
T PRK08633 133 ----------GKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKV 202 (1146)
T ss_pred ----------CcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCC
Confidence 8899999999999999999999999988876531 00001233322222222223333344556654
Q ss_pred CccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhc-cccccc-chHHHHHHHH
Q 013645 217 EDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVS-GVGGAMAVYG 294 (439)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~g~~~~~~~ 294 (439)
++...+...+. .....++....+..++++|.++......++...........++.++.. .+.+.. ..+++....+
T Consensus 203 ~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ 279 (1146)
T PRK08633 203 PAAAPEVFDKK---KYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASA 279 (1146)
T ss_pred CCCCccccccc---ccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 32211100000 001111122234456677777665443332222222222344444322 345555 6788888899
Q ss_pred HHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhc
Q 013645 295 AFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILF 374 (439)
Q Consensus 295 i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~ 374 (439)
++.++++++.|+++||.++++.+ .++.++.+++.. .+.+.++ ....+++.+++|++.+...+..++++.+..
T Consensus 280 ig~~~g~~~~g~l~~r~~~~~~~-~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 351 (1146)
T PRK08633 280 IGIGIGSLLAGRLSGRHIELGLV-PLGALGLALSLF--LLPTAPS-----LASVLVLFFLFGFSAGLFIVPLNALIQFRA 351 (1146)
T ss_pred HHHHHHHHHHHHHhCCceEccch-hHHHHHHHHHHH--HHHHhhh-----HHHHHHHHHHHHHHHHHhhHHHHHHHhhcC
Confidence 99999999999999999876643 455554444432 2233322 245667788889999888888999999999
Q ss_pred cCCc-hhhHHHHHHHHHHHHHHHHHHh
Q 013645 375 KHDT-EGAFAQLKVWQCASIAVVFFIG 400 (439)
Q Consensus 375 p~~~-~~a~s~~~~~~~~g~~i~~~i~ 400 (439)
|++. ++++|.+++.+++|..++..+.
T Consensus 352 p~~~rg~~~~~~~~~~~lg~~~~~~~~ 378 (1146)
T PRK08633 352 PEKELGKVLAANNFLQNVGMLLFLALT 378 (1146)
T ss_pred CccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 8775 5678888888888776554443
No 64
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.90 E-value=1.4e-20 Score=211.18 Aligned_cols=310 Identities=16% Similarity=0.077 Sum_probs=203.8
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHh---HHHHHHH-HhhhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHh
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGT---TGYWLFV-AANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~---~~~~~~~-~~~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~ 140 (439)
.+.....+.++++++|+++||+|||+++.... +..+... .+...++++.++++|+++|++.+..+++..+++.++.
T Consensus 58 ~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~ 137 (1140)
T PRK06814 58 GAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHL 137 (1140)
T ss_pred HHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhc
Confidence 44555677889999999999999999864322 2222222 2233478999999999999999999999999998887
Q ss_pred hhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccc
Q 013645 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKG 220 (439)
Q Consensus 141 ~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 220 (439)
|+++|++++|+..+..++|.++|+++++.+.... +|+.. |+...++.+++.++.++++++++..
T Consensus 138 ----------~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (1140)
T PRK06814 138 ----------NKDELLGANALVEAGTFIAILLGTIIGGLATISG-----NFVIL-VALLMGIAVLGWLASLFIPKTGNAA 201 (1140)
T ss_pred ----------CccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc-----ccHHH-HHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 8899999999999999999999999999987643 47663 3333333334444455666543221
Q ss_pred cccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHH
Q 013645 221 EKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAI 299 (439)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~i 299 (439)
.....+ ....++....+....++|.++.....+++..+..+....++|.++.+ .+.+....|.+...++++.++
T Consensus 202 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~i 276 (1140)
T PRK06814 202 PDLKID-----RNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAV 276 (1140)
T ss_pred CCCeec-----cchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 111000 01111112234456678888776665444443333333455554432 244556788888999999999
Q ss_pred HHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhh----------------ccCCCCccchHHHHHHHHHHhhhhhhhh
Q 013645 300 CSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILIN----------------YSVTSGVLGTLYPLIMAALLGIGDGVLN 363 (439)
Q Consensus 300 g~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 363 (439)
|+++.|+++|+..+++.+ ..+.++..++...+... +....+ .+.+.+..+++|++.+...
T Consensus 277 g~~~~g~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~ 352 (1140)
T PRK06814 277 GSFLASKLSEGRITLLYV-PIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRH---GWRILIDLFGLAAAGGLYI 352 (1140)
T ss_pred HHHHHHHHhCCceeeeee-hHHHHHHHHHHHHHHhcccccccccccccchhhhhcccc---cHHHHHHHHHHHHHHHHhH
Confidence 999999999887655533 33333333222111111 000011 2445677888899999999
Q ss_pred hhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHH
Q 013645 364 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFI 399 (439)
Q Consensus 364 ~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i 399 (439)
+..++++.+..|++. ++++|.+++..+++..++..+
T Consensus 353 ~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~ 389 (1140)
T PRK06814 353 VPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTII 389 (1140)
T ss_pred HHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHH
Confidence 999999999999875 568888888888777666544
No 65
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=2.8e-21 Score=187.54 Aligned_cols=335 Identities=16% Similarity=0.167 Sum_probs=228.3
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-h
Q 013645 33 LSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L 107 (439)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~ 107 (439)
+..+.++...++.......+.+.++.+.+.. ..+.......+++++.|+++||+|||+.+..+.....+..... .
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~ 83 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF 83 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH
Confidence 3344445555554444445544443333322 2444555667788999999999999999999998877765543 4
Q ss_pred cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCC
Q 013645 108 FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG 187 (439)
Q Consensus 108 ~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~ 187 (439)
.+++..+++.|++.|++.+..++...+++.|+. |+|+|++.+++.....++|..+|+.++..+....
T Consensus 84 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--- 150 (352)
T cd06174 84 ASSLWLLLVGRFLLGLGGGALYPAAAALIAEWF----------PPKERGRALGLFSAGFGLGALLGPLLGGLLAESL--- 150 (352)
T ss_pred hccHHHHHHHHHHHHcccccccHhHHHHHHHhC----------CccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 578888999999999999999999999998887 7789999999999999999999999988876542
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHH
Q 013645 188 STSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAF 267 (439)
Q Consensus 188 ~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ 267 (439)
+|+.. +.+..++.++..+...+++ |+++......+........
T Consensus 151 --~~~~~-~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~ 193 (352)
T cd06174 151 --GWRWL-FLILAILGLLLALLLLFLL----------------------------------RLLLLLALAFFLLSFGYYG 193 (352)
T ss_pred --hHHHH-HHHHHHHHHHHHHHHHHHH----------------------------------HHHHHHHHHHHHHHhHHHH
Confidence 37764 4344444444444333332 2333322222222222212
Q ss_pred HHhhcchhhhcc-cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchH
Q 013645 268 VWAEFTKEIVTP-ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTL 346 (439)
Q Consensus 268 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (439)
.....+....+. +.+..+.+......+++..++.++.|++.||.++|+..+..+..+..++.. .....++ ..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~-----~~ 266 (352)
T cd06174 194 LLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLL--LLALAPS-----LA 266 (352)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH--HHHHhcc-----HH
Confidence 222333333222 445567788888999999999999999999999876123455555554433 2223322 25
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHH
Q 013645 347 YPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALV 421 (439)
Q Consensus 347 ~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~~~~~~~ 421 (439)
...+..++.|++.+...+..++++.+..|+++ +.+.|.++..+++|..+++.+.+. .++...+++..++.+++.+
T Consensus 267 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i 346 (352)
T cd06174 267 LLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAAL 346 (352)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence 66778889999999999999999999999665 457899999888888877666543 3566777777777777666
Q ss_pred HHH
Q 013645 422 GIL 424 (439)
Q Consensus 422 ~~~ 424 (439)
..+
T Consensus 347 ~~~ 349 (352)
T cd06174 347 LLL 349 (352)
T ss_pred Hhe
Confidence 543
No 66
>TIGR00898 2A0119 cation transport protein.
Probab=99.90 E-value=1.5e-21 Score=200.25 Aligned_cols=334 Identities=14% Similarity=0.042 Sum_probs=210.8
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhh
Q 013645 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (439)
Q Consensus 64 ~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~ 142 (439)
..++.+..+.+++++.|+++||+|||+++.++.++.++..+. ...++++.+++.|++.|++.+..++...+++.|+.
T Consensus 132 ~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~-- 209 (505)
T TIGR00898 132 TQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFL-- 209 (505)
T ss_pred HHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheec--
Confidence 456677788889999999999999999999999887776554 46789999999999999999999999888888887
Q ss_pred hhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCcc---
Q 013645 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK--- 219 (439)
Q Consensus 143 ~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~--- 219 (439)
|+++|+++.++...+..+|.++++.++..+. +||+. |.+.++..++..+..+++||+++.
T Consensus 210 --------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~--------~wr~~-~~~~~i~~~~~~~~~~~~~esp~~l~~ 272 (505)
T TIGR00898 210 --------PKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP--------DWRWL-QLAVSLPTFLFFLLSWFVPESPRWLIS 272 (505)
T ss_pred --------ChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh--------HHHHH-HHHHHHHHHHHHHHHHhcCCChHHHHH
Confidence 8899999999998888899888888776542 28774 444555555555555678875431
Q ss_pred -cccccc-c----------c--ch-hhhhhHHH----H--HHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhc
Q 013645 220 -GEKETA-D----------A--SV-NFYSYLVS----L--SKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT 278 (439)
Q Consensus 220 -~~~~~~-~----------~--~~-~~~~~~~~----~--~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~ 278 (439)
++.+.. + . +. .......+ . ....++++++|+++......+.......+.....+...
T Consensus 273 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 350 (505)
T TIGR00898 273 QGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDL-- 350 (505)
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccc--
Confidence 110000 0 0 00 00000000 0 01345567788776654433222221111100111111
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhh
Q 013645 279 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 358 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 358 (439)
..++.+ ........++..+++.++.+++.||++||+.+ ..+.++.+++... +.+.++.. .....+..++.+++
T Consensus 351 ~~~~~~-~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~-~~~~~~~~~~~l~--~~~~~~~~---~~~~~~~~~~~~~~ 423 (505)
T TIGR00898 351 GNLGGN-IYLDLFISGLVELPAKLITLLLIDRLGRRYTM-AASLLLAGVALLL--LLFVPVDL---YFLRTALAVLGKFG 423 (505)
T ss_pred cccCCC-hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHHHH--HHHcCCCc---hHHHHHHHHHHHHH
Confidence 112211 22333456788889999999999999988744 4555554444321 22333321 13344445556666
Q ss_pred hhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHHHHHHHHH
Q 013645 359 DGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPYI--SLQAMLIVMVVGICVALVGILF 425 (439)
Q Consensus 359 ~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~ 425 (439)
.+...+..+++..|++|++.+ .+.|..+....+|..+++.+.... +....+.++++..+++.+..++
T Consensus 424 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (505)
T TIGR00898 424 ITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILTLF 493 (505)
T ss_pred HHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc
Confidence 667778888999999998754 578888888888888887665521 2344555566655555554443
No 67
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.90 E-value=5.3e-21 Score=191.66 Aligned_cols=377 Identities=11% Similarity=0.046 Sum_probs=210.6
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhhHhh-hccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHH
Q 013645 27 TRDVHILSCAFLLIFLAYGAAQNLETT-VNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL 101 (439)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~ 101 (439)
+++.+.+.+.+++...++....++.+. +.++.+.+.. ..+.......+++++.|+++||+|||+++.++..+.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLV 88 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 456666667777777766544444333 3333444443 34556667778899999999999999999887665443
Q ss_pred HHHhhh----cchhh-HHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHH
Q 013645 102 FVAANL----FPSWY-TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI 176 (439)
Q Consensus 102 ~~~~~~----~~~~~-~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i 176 (439)
...... .+.+. .......+.++..+..+......+.++.++ .++++|+.+|......++|.++|+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~g~~~g~~~~~~~~g~~i~~~~ 160 (420)
T PRK09528 89 LFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER--------VSRRSGFEYGRARMWGSLGWALCAFI 160 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH--------HHhhccccchhhHHhhhHHHHHHHHH
Confidence 322111 11111 011122333333333333322223333321 13467788888888889999999998
Q ss_pred HHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCcccc-ccccccchhhhhhHHHHHHHHHHhhccchhHHHH
Q 013645 177 TLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGE-KETADASVNFYSYLVSLSKSITTLLADVRMLLII 255 (439)
Q Consensus 177 ~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (439)
++.+... +|+.. |++..++.++..+..+++++++++++ .++++.++++ +...++.++.+|+|+++.+.
T Consensus 161 ~g~l~~~------~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~l~ 229 (420)
T PRK09528 161 AGILFNI------NPQIN-FWLGSGSALILLVLLFFAKPDAPSTAKVANALGANAS----AVSLKDALALLKLPKFWFLV 229 (420)
T ss_pred HHHHHhc------CchHh-HHHHHHHHHHHHHHHhcccccccchhhhccchhcccc----cccHHHHHHHccCCCeEeeh
Confidence 8877532 36653 44445445444444444443322211 1000000011 11223455678888876654
Q ss_pred HHHHHhhHHHHHHHhhcchh----hhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHH
Q 013645 256 PLFAYSGLQQAFVWAEFTKE----IVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW 331 (439)
Q Consensus 256 ~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~ 331 (439)
...+............++.+ ..+.+.+....|.+..+..++..++.++.|++.||+++|+.+ ..+.++..+...
T Consensus 230 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~-~~~~~l~~~~~~- 307 (420)
T PRK09528 230 LYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNAL-LLAGTIMAVRII- 307 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhh-HHHHHHHHHHHH-
Confidence 33222211111111122222 212233344567888888889999999999999999988754 455554444432
Q ss_pred HHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchh-hHHH-HHHHHHHHHHHHHHHhh----hhhH
Q 013645 332 ILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG-AFAQ-LKVWQCASIAVVFFIGP----YISL 405 (439)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~-a~s~-~~~~~~~g~~i~~~i~~----~~~~ 405 (439)
+..+.++ +....+...+.|++.+...+....++.+.+|++.++ +++. ++....+|..+++.+.+ ..++
T Consensus 308 -l~~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~ 381 (420)
T PRK09528 308 -GSGFATG-----PLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGF 381 (420)
T ss_pred -HHHhccc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 2334433 244556677788888777777788899999877543 4443 66666677766554433 2356
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 406 QAMLIVMVVGICVALVGILFLTIQV 430 (439)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
...+...+++.++..+..++..++.
T Consensus 382 ~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 382 QGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7777777777666665555544433
No 68
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.90 E-value=5.2e-23 Score=197.30 Aligned_cols=292 Identities=13% Similarity=0.057 Sum_probs=192.9
Q ss_pred CCcCccccccc-ccccccCccccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCch----HHHHHHHHHHHhhhhhH
Q 013645 5 DSRDEEAPLVA-DSLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVA 79 (439)
Q Consensus 5 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~----~~~~~~~~~~~~~~~~~ 79 (439)
++.++.+|+-. +..++.+.++.++.++++.+..++-.+..+.+-.+.+.+....|.++ .....+...++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~ 88 (493)
T KOG1330|consen 9 TTTSSGNPLIELEGLDHLSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLF 88 (493)
T ss_pred CCccCCCcccccccccccccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHH
Confidence 34456666655 33334577778888888888888888777766544444333233332 23456777889999999
Q ss_pred HHHHHHhchhHHHHHHhHHHHHHHHhh-hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhh
Q 013645 80 SLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSF 158 (439)
Q Consensus 80 g~l~dr~G~r~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~ 158 (439)
|+++|||.||+++.+|..+|.+.++.. +...++++.++|.+.|+|++...+..+++++|.+ |+++|++.
T Consensus 89 gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f----------~~~~Rs~~ 158 (493)
T KOG1330|consen 89 GYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSF----------PDDKRSRV 158 (493)
T ss_pred HHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcC----------cchhhhHH
Confidence 999999999999999999999987764 5678889999999999999999999999999998 89999999
Q ss_pred hHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHH-HHHHHhccCCCccccccccccchhhhhhHHH
Q 013645 159 NGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLG-TILMCFLRKEEDKGEKETADASVNFYSYLVS 237 (439)
Q Consensus 159 ~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 237 (439)
+++++.....|..+|.+++..+..... .||+. |...++++++. ++..++++||+++.+++.+.... ..++...
T Consensus 159 ~~ify~~ipvGsglG~vvgs~va~~~~----~Wr~a-f~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~-~~~~~ts 232 (493)
T KOG1330|consen 159 LGIFYFAIPVGSGLGYVVGSVVASLTF----WWRWA-FRGSAVLGVIVGLLVFLFVREPERGARDEVDGENK-MVKPFTS 232 (493)
T ss_pred HHHhhhhcccccceeEEeeeeeccCcc----ceEEE-EEeehHHHHHHHHHHHhhccCcccccccccccCCc-CCCCccc
Confidence 999999999999999888888765532 38875 44556666644 44457788888753333221111 0112233
Q ss_pred HHHHHHHhhccchhHHHHHHHH-HhhHHH--HHHHhhcchhhh-cccccccchHHHHHHHHHHHHHHHHhhhhhhcCCC
Q 013645 238 LSKSITTLLADVRMLLIIPLFA-YSGLQQ--AFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLP 312 (439)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~~~~-~~g~~~--~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~ 312 (439)
..++++...|+|.+..-.+.+. ..+... .++.+.+.++.. -.+.+.........+...+..+|.+++|.++||+.
T Consensus 233 ~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~ 311 (493)
T KOG1330|consen 233 VWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLS 311 (493)
T ss_pred hHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHH
Confidence 3445556666666544333221 122211 122222222211 11112222233445677788888889999888843
No 69
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.90 E-value=3.2e-20 Score=183.71 Aligned_cols=353 Identities=12% Similarity=0.004 Sum_probs=220.8
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHhchhH----HHHHHhHHHH
Q 013645 29 DVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKN----ALILGTTGYW 100 (439)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r~----~l~~g~~~~~ 100 (439)
....+...+++++.++....+..|...+|.+.+... .++......+++++.++++||+|||+ .+..+...+.
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 5 PFRWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFA 84 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 334466777777777766667677666655555433 34445556677889999999999844 3333332222
Q ss_pred HHHHhhhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHh
Q 013645 101 LFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (439)
Q Consensus 101 ~~~~~~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l 180 (439)
+. .....++++.+++.|+++|.+.+...+...++..+. +++|++++|......++|.++|+++++.+
T Consensus 85 ~~-~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~------------~~~~~~~~g~~~~~~slG~~~g~~l~g~l 151 (382)
T TIGR00902 85 AA-FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW------------QKQFGLDYGKVRLIGSAAFIIGSALFGGL 151 (382)
T ss_pred HH-HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH------------HHHcCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 21 112457888888899999999887777766654322 36789999999999999999999998888
Q ss_pred hcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCC-CccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHH
Q 013645 181 LKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE-EDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFA 259 (439)
Q Consensus 181 ~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 259 (439)
.++ .+||..++. ...+.++.. +.+.++|+ +++++++ +. +.++ .++..+.+|||+++......+
T Consensus 152 ~~~-----~g~~~~f~~-~~~~~~~~~-~~~~~~~~~~~~~~~~--~~---~~~~----~~~~~~~l~~~~~~~~l~~~~ 215 (382)
T TIGR00902 152 IGM-----FDEQNILAI-LTAGLAFML-IGFLIKPTIPPKDAIP--ED---ESQG----DSAFIALLKNPMNLRFLAAVC 215 (382)
T ss_pred HHH-----cChhHHHHH-HHHHHHHHH-HHHHcCCCCCCCcccc--cc---cccc----chhHHHHHcChHHHHHHHHHH
Confidence 754 358875433 333222222 22333332 2211111 00 0011 123446789999887665444
Q ss_pred HhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCC
Q 013645 260 YSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVT 339 (439)
Q Consensus 260 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~ 339 (439)
........+.+.++.++.+.+.+.+..|....+..++++++..+.+++.||++.|+. +..+.+...+.+. .+.+.++
T Consensus 216 l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~-l~~~~~~~~~~~~--~~~~~~~ 292 (382)
T TIGR00902 216 LIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDL-LLISAIACVGRWA--IIGAIEA 292 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHH-HHHHHHHHHHHHH--HHHhHhh
Confidence 333333333345555554455666678888888999999999999999999998764 4567766666543 3344433
Q ss_pred CCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHH-HHHHHHHHHHHHhhhh----hHHHHHHHHH
Q 013645 340 SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKV-WQCASIAVVFFIGPYI----SLQAMLIVMV 413 (439)
Q Consensus 340 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~-~~~~g~~i~~~i~~~~----~~~~~~~~~~ 413 (439)
...+++...+.|++.+...+....++.+. |++. +.+.++++. ...+|.+++..+++.. +. ..+...+
T Consensus 293 -----~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~ 365 (382)
T TIGR00902 293 -----FPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMA 365 (382)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHH
Confidence 35567778999999999999999999987 6654 445677763 3445666665555432 32 3344444
Q ss_pred HHHHHHH
Q 013645 414 VGICVAL 420 (439)
Q Consensus 414 ~~~~~~~ 420 (439)
++.+++.
T Consensus 366 ~~~~~~~ 372 (382)
T TIGR00902 366 IIAAAAF 372 (382)
T ss_pred HHHHHHH
Confidence 4444443
No 70
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.89 E-value=1.7e-20 Score=183.71 Aligned_cols=318 Identities=11% Similarity=0.054 Sum_probs=197.7
Q ss_pred hhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhhhcchhhHHHHHHHHhh
Q 013645 47 AQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLG 122 (439)
Q Consensus 47 ~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~~~~~~~~li~~r~i~G 122 (439)
...+.|.+.++.+.+.. ..+.....+.+++++.|++.||+|||+++.++.+..++..+....++...+++.|++.|
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 98 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIRSAPGTALLFAGTALIG 98 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34556666665555443 34556667788899999999999999999999877665444445577888888999999
Q ss_pred hHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHH
Q 013645 123 FAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGV 202 (439)
Q Consensus 123 ig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~ 202 (439)
+|.+...+...+++.+.. +++|++++|++....++|..+|+.++..+..+.. .+||.. |....++
T Consensus 99 ~g~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~---~~w~~~-f~~~~~~ 163 (355)
T TIGR00896 99 VGIAIINVLLPSLIKRDF-----------PQRVGLMTGLYSMALMGGAALAAAATVPLAQHSG---GHWQQA-LAWWALP 163 (355)
T ss_pred HHHHHHhccchHHHHHhC-----------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---hhHHHH-HHHHHHH
Confidence 999988777776666553 4689999999999999999999988777654321 137663 3333332
Q ss_pred HHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhccccc
Q 013645 203 ITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG 282 (439)
Q Consensus 203 ~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 282 (439)
.++.. ..++++.+++++++.+ ... +..++.+|+|+++.+................+.|.++.+.+.+
T Consensus 164 ~~~~~--~~~~~~~~~~~~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~ 230 (355)
T TIGR00896 164 ALLAL--LAWIPQVRRRVAANQT----TTR-------LTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGAS 230 (355)
T ss_pred HHHHH--HHHhhhhccccCCCCC----CCC-------CCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 22222 2234432221111100 000 0122456788877654433322222111223445444444566
Q ss_pred ccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhh
Q 013645 283 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 362 (439)
Q Consensus 283 ~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 362 (439)
.++.+.....++++.++++++.|++.||+++|+..+..+..+.+++.. .+.+.++. ... ....++|++.+..
T Consensus 231 ~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~-~~~~l~g~~~g~~ 302 (355)
T TIGR00896 231 AATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLC--GLLFAPMH-----GLW-AWALVLGLGQGGA 302 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH--HHHHhhhh-----HHH-HHHHHHHHhhhhH
Confidence 667888888999999999999999999996444344445555444432 12233322 111 2456789998888
Q ss_pred hhhHHHHHHhhccCC-c-hhhHHHHHHHHHHHHHHHHHHh
Q 013645 363 NTQLSALLGILFKHD-T-EGAFAQLKVWQCASIAVVFFIG 400 (439)
Q Consensus 363 ~~~~~a~~~~~~p~~-~-~~a~s~~~~~~~~g~~i~~~i~ 400 (439)
.+...+.+.+..+++ + +.+.++.+....++..+++.+.
T Consensus 303 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~ 342 (355)
T TIGR00896 303 FPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFV 342 (355)
T ss_pred hHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777777666543 3 3356666666666656665443
No 71
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.89 E-value=1e-19 Score=181.98 Aligned_cols=374 Identities=10% Similarity=-0.015 Sum_probs=218.8
Q ss_pred HHHHHHHHHHHHHHhhhh-hhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHhch-hHHHHHHhHHHHHHHH
Q 013645 31 HILSCAFLLIFLAYGAAQ-NLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGS-KNALILGTTGYWLFVA 104 (439)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~-~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~-r~~l~~g~~~~~~~~~ 104 (439)
-.++.-+++.+..+.... .+.+.+.++.+.+... .++......+++++.|.++||+|+ |+++.++.++.++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~ 84 (418)
T TIGR00889 5 AKLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLF 84 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 345556666666665554 3333344444444433 455556667788999999999965 7788877776655443
Q ss_pred h-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcC
Q 013645 105 A-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (439)
Q Consensus 105 ~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~ 183 (439)
. ...++++.+++.|++.|++.+...+...+...+...+.. +|...+..|.|..|. +|.++|+.+++.+...
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g--~~~~~~~~~~r~~G~------lG~~ig~~l~g~l~~~ 156 (418)
T TIGR00889 85 FAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAG--LDVVTDFPPIRVMGT------IGFIAAMWAVSLLDIE 156 (418)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcC--CCchhcCCCeeeehh------HHHHHHHHHHHHhccc
Confidence 3 355777777788999999877666655544332321110 011123355666663 6777888777665221
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhH
Q 013645 184 DKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGL 263 (439)
Q Consensus 184 ~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 263 (439)
..|+. +.+.+++.++..+..+++||+++.++++ +.+. + +..+ .+..+.+|+|+++.+....+..+.
T Consensus 157 -----~~~~~--f~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~-~-~~~~---~~~~~~~k~~~~~~~~~~~~~~~~ 222 (418)
T TIGR00889 157 -----LSNIQ--LYITAGSSALLGVFALTLPDIPVAKSTA--KMSI-K-VMLG---LDAFILFKNKRMAIFFFFSMLLGA 222 (418)
T ss_pred -----chhHH--HHHHHHHHHHHHHHHhcCCCCCCCcccc--ccCH-H-HHhh---hhHHHHhcCCCeeeHHHHHHHHHh
Confidence 12332 4344554555444455677653221111 0000 0 0000 123457789998776655444443
Q ss_pred HHHHHHhhcchhhhccc--------ccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhh
Q 013645 264 QQAFVWAEFTKEIVTPA--------LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILIN 335 (439)
Q Consensus 264 ~~~~~~~~~~~~~~~~~--------~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~ 335 (439)
........++.++.+.+ .+.+..+....+..+.++++.++.|+++||+++|+. +..+.++..+++.. +.
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~-l~~~~~~~~v~~~l--~~ 299 (418)
T TIGR00889 223 PLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKV-MLLSLVAWALRFGF--FA 299 (418)
T ss_pred HHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-HHHHHHHHHHHHHH--HH
Confidence 22222223333332222 223566888888899999999999999999998874 45666665554332 22
Q ss_pred ccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHH-HHHHHHHHHHHHHhhh----------h
Q 013645 336 YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLK-VWQCASIAVVFFIGPY----------I 403 (439)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~-~~~~~g~~i~~~i~~~----------~ 403 (439)
...+.. .....+++..++.|++.+...+....++.+.+|++. ++++|.++ ..+++|.++++.+.+. .
T Consensus 300 ~~~~~~-~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~ 378 (418)
T TIGR00889 300 YGDPEY-FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTF 378 (418)
T ss_pred HcCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCC
Confidence 221110 012345567888999988888888899999999775 45788876 5567777777666542 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 404 SLQAMLIVMVVGICVALVGILFLTIQV 430 (439)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
++...+.+.++..+++++..++..++.
T Consensus 379 ~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 379 DWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 356666666666666666666555443
No 72
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.89 E-value=1e-19 Score=180.13 Aligned_cols=331 Identities=12% Similarity=-0.009 Sum_probs=201.3
Q ss_pred HHHHHHHHHhhhhhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHhchh----HHHHHHhHHHHHHHHhhh
Q 013645 36 AFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSK----NALILGTTGYWLFVAANL 107 (439)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r----~~l~~g~~~~~~~~~~~~ 107 (439)
.++.++.++....+..|...+|.+.+... .+.......+++++.|++.||+||| +.+.++.....+ .....
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~~ 90 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAV-AFWFG 90 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHH-HHHHh
Confidence 35555555555555555554444444433 3344445566788899999999983 333333222111 11223
Q ss_pred cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCC
Q 013645 108 FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG 187 (439)
Q Consensus 108 ~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~ 187 (439)
.++++.+++.|++.|++.+..++...++..++. ++|++++|......++|.++||++++.+..+
T Consensus 91 ~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~------------~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~---- 154 (382)
T PRK11128 91 AHSFWLLFVAIGLFNLFFSPLVPLTDALANTWQ------------KQIGLDYGKVRLWGSIAFVIGSALTGKLVSW---- 154 (382)
T ss_pred cccHHHHHHHHHHHHHHHcccccHHHHHHHHHH------------hhccCCcchHHHHHHHHHHHHHHHHHHHHHH----
Confidence 577888888999999998888887666655442 4678888888888899999999999988754
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHH
Q 013645 188 STSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAF 267 (439)
Q Consensus 188 ~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ 267 (439)
.+||..+ ++.++..++..+..++.||++++++++ ++ .+ + ..++.++.+|+|+++......+..+.....
T Consensus 155 -~g~~~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~-~---~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~ 223 (382)
T PRK11128 155 -FGEQAIL-WILTAGVASMLLGQLLRPTIMPQGESR---QQ--ES-A---GWPAWKALLKEPTVWRFLLCVSLLQGSHAA 223 (382)
T ss_pred -cChhHHH-HHHHHHHHHHHHHHHccCCCCCccccc---cc--cc-c---ccchHHHHHcChhHHHHHHHHHHHHHHhHh
Confidence 3588754 333433333333333344432211111 00 00 0 012345678899988765544433332222
Q ss_pred HHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHH
Q 013645 268 VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLY 347 (439)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (439)
..+.++.+..+.+.+.+..|.......++.++..++.|++.||.++|+. +..+.+...+.+. ...+.++ ++.
T Consensus 224 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-l~~~~~~~~~~~~--~~~~~~~-----~~~ 295 (382)
T PRK11128 224 YYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDL-LLLSAICGVVRWG--LMGSTTA-----LPW 295 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHH--HHHhhhh-----HHH
Confidence 2233333333345555667888788888899999999999999998774 4456665555543 2334333 355
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHH-HHHHHHHHHHHHHhhh
Q 013645 348 PLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLK-VWQCASIAVVFFIGPY 402 (439)
Q Consensus 348 ~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~-~~~~~g~~i~~~i~~~ 402 (439)
.++..+++|++.+...+....++.+..+++.+++.+.++ ..+.+|..+++.+.+.
T Consensus 296 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~ 351 (382)
T PRK11128 296 LIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGF 351 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677888899999888888888888876666555667665 3334555566555443
No 73
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.89 E-value=1.4e-19 Score=180.42 Aligned_cols=321 Identities=12% Similarity=0.049 Sum_probs=205.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHH
Q 013645 29 DVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA 104 (439)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 104 (439)
.++.+.+.++.....+.....+.|.+.++.+.+... .+..+..+.+++++.|++.||+|||+++..+.+++++..+
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 345555556655555555456667766665555433 4556667788899999999999999999999988766554
Q ss_pred hh----hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHh
Q 013645 105 AN----LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (439)
Q Consensus 105 ~~----~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l 180 (439)
.. ..++++.+++.|++.|+|.|..+++.++++.+.. |+++|++.+++....+++|..+|+.++..+
T Consensus 84 l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 84 LFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMG----------PESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHC----------CHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 42 2367888889999999999999999999988876 778899999999999999999999988877
Q ss_pred hcCCCC---------------------CCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHH
Q 013645 181 LKDDKG---------------------GSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLS 239 (439)
Q Consensus 181 ~~~~~~---------------------~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (439)
...... ...+||.. |.+.+++.++..++..+.+.|+.+++++ + +.+.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~-fl~~a~~~~~~~~~~~~~~~p~~~~~~~--~-----~~~~~~-- 223 (410)
T TIGR00885 154 ILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTP-YMIIGAVVLAVALLIMLTKMPALNHSDA--K-----QISFSA-- 223 (410)
T ss_pred HhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCcccc--c-----cccchh--
Confidence 532100 01247764 4444444433333323344443211111 0 011111
Q ss_pred HHHHHhhccchhHHHHH-HHHHhhHHHHHHHhhcchhhhccccccc--chHHHHHHHHHHHHHHHHhhhhhhcCCCCcce
Q 013645 240 KSITTLLADVRMLLIIP-LFAYSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITF 316 (439)
Q Consensus 240 ~~~~~~~~~~~~~~l~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~ 316 (439)
+..+.+|+|+++.... .+++.+.+.+.+ ++++.+..+...+.+ ..+.....+..+..+|+++.+++.||+++|+.
T Consensus 224 -~~~~~~~~~~~~~~~l~~f~yvg~e~~~~-s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~ 301 (410)
T TIGR00885 224 -SLSRLARIRHYREGVIAQFFYVGVQIMCW-TFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKV 301 (410)
T ss_pred -hHHHHHhChhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 1234667888776443 455666664443 455544322222222 22334455667788999999999999987764
Q ss_pred ehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchh
Q 013645 317 IVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG 380 (439)
Q Consensus 317 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~ 380 (439)
+ ....++..++.. +..+.++ .....+.++.|++.+...|+++++..+..+++...
T Consensus 302 l-~i~~~~~~~~~l--l~~~~~~------~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~ 356 (410)
T TIGR00885 302 L-MAYAIIGMALCL--GSIFAGG------HVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKY 356 (410)
T ss_pred H-HHHHHHHHHHHH--HHHHcCC------hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 3 344444444322 2223322 12345666677778788899999999999877644
No 74
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.88 E-value=3.9e-19 Score=176.58 Aligned_cols=366 Identities=14% Similarity=0.071 Sum_probs=195.5
Q ss_pred ccCccccchhHHHHHHHHHHHHHHHhhhhhhHhh-hccCCCCchHHHHHHHH-----HHHhhhhhHHHHHHHhchhHHHH
Q 013645 20 VLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETT-VNTEGNLGTISLGILYT-----SFTCFSLVASLVVRVLGSKNALI 93 (439)
Q Consensus 20 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~g~~~~~~~~~-----~~~~~~~~~g~l~dr~G~r~~l~ 93 (439)
|..-|+..+....+.+..++...+.....+..+. +.++.+.+....+.... .+..+++++++ .||+||||.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~ 85 (393)
T PRK15011 7 VSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLI 85 (393)
T ss_pred cccchhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHH
Confidence 3334444444445545555544444443433333 34444554444333322 33344555566 99999998754
Q ss_pred -HHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccch--hhhhHHHHHHHHHh
Q 013645 94 -LGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVI--GSFNGEFWGMFASH 169 (439)
Q Consensus 94 -~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~r--g~~~g~~~~~~~~G 169 (439)
.+.+...+..+. ...++++.+++.+.+.|...+..++...++..++. ++++| +...++..+..++|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~lg 155 (393)
T PRK15011 86 VFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHA----------DKTGREAVMFSSFLRAQVSLA 155 (393)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh----------hhccchHHHHHHHHHHHHHHH
Confidence 444443333332 34567776655555555444555666666555543 32323 34557777888999
Q ss_pred hhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHH-HHhccCCCccccccccccchhhhhhHHHHHHHHHHhhcc
Q 013645 170 QFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLAD 248 (439)
Q Consensus 170 ~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (439)
.++|+++++.+..+ .|||.. |+..+++.++..+. .+++||++++++++.. + .+. . .++
T Consensus 156 ~~~g~~i~~~l~~~-----~gw~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~---~---~~~ 214 (393)
T PRK15011 156 WVIGPPLAYALAMG-----FSFTVM-YLSAAVAFIVCGVMVWLFLPSMRKELPLATG-----T----LEA---P---RRN 214 (393)
T ss_pred HHHhhHHHHHHHHh-----cChHHH-HHHHHHHHHHHHHHHHhhcCccCCCCccccc-----c----ccc---c---ccc
Confidence 99999999888653 368864 44445544444333 3456664322111100 0 000 0 112
Q ss_pred ch-hHHHHHH-HHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHH
Q 013645 249 VR-MLLIIPL-FAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQ 325 (439)
Q Consensus 249 ~~-~~~l~~~-~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~ 325 (439)
++ .+..... ....+. ...+..+.|.++.+ .+.+.++.+.+.....++.+++.++.|+++||+++|+. +..+.+..
T Consensus 215 ~~~~~~~~~~~~~~~~~-~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~-~~~~~~~~ 292 (393)
T PRK15011 215 RRDTLLLFVICTLMWGT-NSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFL-MRVAAVAG 292 (393)
T ss_pred cccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH-HHHHHHHH
Confidence 22 2221111 111111 11112233333321 24455567776666667778899999999999998864 33444433
Q ss_pred HHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHHhhh---
Q 013645 326 VVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY--- 402 (439)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i~~~--- 402 (439)
.+.+. .....++ +....+..++.+++.+...+..+++..|.+|++++.+.+.++...++|..+++.+.+.
T Consensus 293 ~~~~~--~~~~~~~-----~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~ 365 (393)
T PRK15011 293 VCFYA--GMLMAHS-----PAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAE 365 (393)
T ss_pred HHHHH--HHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33222 1222222 1333334444444444555556677889999887778887777777777776655543
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHH
Q 013645 403 -ISLQAMLIVMVVGICVALVGILFL 426 (439)
Q Consensus 403 -~~~~~~~~~~~~~~~~~~~~~~~~ 426 (439)
.++...+++..+..+++++.++++
T Consensus 366 ~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 366 IWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 456667777777777777666554
No 75
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.88 E-value=4.5e-21 Score=191.77 Aligned_cols=344 Identities=11% Similarity=0.055 Sum_probs=227.6
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-h--cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhh
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~--~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~ 141 (439)
.+.++.++.++++++|++.||+|.|+++..+.++.++.++.. . ..+++.+++.|+++|++.|..+++.+.+.+.|+
T Consensus 79 ~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~- 157 (466)
T KOG2532|consen 79 FSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWA- 157 (466)
T ss_pred HHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeEC-
Confidence 566666777888999999999999999999999887776653 2 234457788999999999999999999888887
Q ss_pred hhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHH-HhccC-CCcc
Q 013645 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRK-EEDK 219 (439)
Q Consensus 142 ~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~-~~l~~-~~~~ 219 (439)
|++||++..++..++.++|.+++.++++.+-.. ..||+..+| ++++++++-.+++ ++..| |.++
T Consensus 158 ---------P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s----~~GW~sifY-~~g~~g~i~~~~w~~~~~d~P~~h 223 (466)
T KOG2532|consen 158 ---------PPNERSTFIAILTAGSQLGTIITMPVSGLLCES----SLGWPSIFY-VFGIVGLIWFILWFLFYSDSPSKH 223 (466)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc----CCCCchHHH-HHHHHHHHHHHHHHHHhcCCcccC
Confidence 999999999999999999999999998888654 257988644 4666666544444 34444 4443
Q ss_pred cc---ccccccchhhhhhHHH--HHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHH
Q 013645 220 GE---KETADASVNFYSYLVS--LSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVY 293 (439)
Q Consensus 220 ~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~ 293 (439)
+. +|.+.++..+.....+ ....++++++++.+|-.....+.-.+.......+.|.++.+ -+++.+..|+..++.
T Consensus 224 ~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP 303 (466)
T KOG2532|consen 224 PNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALP 303 (466)
T ss_pred CCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHH
Confidence 31 1211111110000000 01236678899999988776554444444444556665543 467788899999999
Q ss_pred HHHHHHHHHhhhhhhcCCCCc--------ceehhhHHHHHHHHHHHHHhhccCCCCc-cchHHHHHHHHHHhhhhhhhhh
Q 013645 294 GAFDAICSLAAGRLTTGLPSI--------TFIVSGGAIAQVVVFLWILINYSVTSGV-LGTLYPLIMAALLGIGDGVLNT 364 (439)
Q Consensus 294 ~i~~~ig~~~~G~l~d~~~~r--------~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~~~~~~ 364 (439)
.+...+..++.|.++||+.+| +.+=.++....+++++ .+.+.++.+. .....+.+...+.|+..+.
T Consensus 304 ~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~--~l~~~~~~~~~~a~~~l~~~~~~~g~~~~G--- 378 (466)
T KOG2532|consen 304 FLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLL--VLAFTSDEHRLLAVILLTIAIGLSGFNISG--- 378 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHH--eeeecCCCcchHHHHHHHHHHHHcccchhh---
Confidence 999999999999999987542 2111223333344332 3455544321 0001111223333333222
Q ss_pred hHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHHhh-------hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 365 QLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGP-------YISLQAMLIVMVVGICVALVGILFLTIQ 429 (439)
Q Consensus 365 ~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (439)
.+.-..|..|++.....|+.|+..+++..+++.+.+ ...+...|.+.+++.+++.+.|.+..+.
T Consensus 379 -f~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~ 449 (466)
T KOG2532|consen 379 -FYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSG 449 (466)
T ss_pred -hHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecC
Confidence 223333447777777788888888888888776643 2367788899999999999888766443
No 76
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.87 E-value=1.4e-19 Score=172.63 Aligned_cols=379 Identities=13% Similarity=0.053 Sum_probs=236.3
Q ss_pred CccccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHHHHHHHH----HHHhhhhhHHHHHHHhchhHHHHHHhH
Q 013645 22 TPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYT----SFTCFSLVASLVVRVLGSKNALILGTT 97 (439)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~----~~~~~~~~~g~l~dr~G~r~~l~~g~~ 97 (439)
++++..||++.-..++.+.|..+.....+.+.+.+|.++.....+.+.+ .-++.-++-|.+.||+|.|++.+++.+
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~ 87 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSML 87 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHH
Confidence 4556778888888888888888888888888888777776654443333 334555789999999999999999998
Q ss_pred HHHHHHHh--h--hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhh
Q 013645 98 GYWLFVAA--N--LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVG 173 (439)
Q Consensus 98 ~~~~~~~~--~--~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG 173 (439)
...+-+.. . ..++++.+++.+.+.|++.+..-+ ..++++.+. ||+++|.++|++. ..|+|..+.
T Consensus 88 l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav-~m~~~s~~f----------P~~~qG~AlGI~g-~GN~G~av~ 155 (417)
T COG2223 88 LLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAV-GMPNASFFF----------PKEKQGLALGIAG-AGNLGVAVA 155 (417)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehc-ccccccccC----------ChhhhhHHHHHhc-cccccHHHH
Confidence 75553332 1 245667888999999999765433 344455554 9999999999998 778888777
Q ss_pred hHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHH-HhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhH
Q 013645 174 NLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRML 252 (439)
Q Consensus 174 ~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (439)
..++..+......+ .|+.. -.++.+..++..+.. +..+|.++++.+. + +.+. .+.+.+.++|+.|
T Consensus 156 q~~~P~v~~~~g~~--~w~~~-~~i~~~~l~v~~v~~~~~~~d~p~~r~~~-~--------~~~~--~~~~~v~~~~~~W 221 (417)
T COG2223 156 QLVAPLVAVAFGFL--AWRNV-AGIYVVALAIAAVLAWLGMNDVPEHRASV-K--------PQLP--AQLKAVFSNKDTW 221 (417)
T ss_pred HHHHHHHHHHHhhH--HHHHH-HHHHHHHHHHHHHHHHHHhCCChhhhccc-c--------ccch--hHHHHHhcCcchH
Confidence 77766665432100 16653 334455555544443 4455533221110 0 0010 1234566799999
Q ss_pred HHHHHHH-HhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHH
Q 013645 253 LIIPLFA-YSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 330 (439)
Q Consensus 253 ~l~~~~~-~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~ 330 (439)
.+....+ ..|-..++ ..+++.++.+ .+.++...|.......+...+.+.++|+++||+|.++.+ ......++++..
T Consensus 222 ~lsllY~~tFG~Fvgf-s~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~-~~~f~~~~~~~~ 299 (417)
T COG2223 222 LLSLLYFATFGGFVGF-SAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVT-LAVFVGMALAAA 299 (417)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHH-HHHHHHHHHHHH
Confidence 8876543 22322222 2345544432 345555677777788888889999999999999977644 344444443332
Q ss_pred HHHhhccCCCCc--cchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHH-----HHHHHHhhhh
Q 013645 331 WILINYSVTSGV--LGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASI-----AVVFFIGPYI 403 (439)
Q Consensus 331 ~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~-----~i~~~i~~~~ 403 (439)
. + .+.++..- ......+......+++.+.-+...+.++..++|++.+.+.++.-....+|. ..+...+...
T Consensus 300 ~-l-~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg 377 (417)
T COG2223 300 L-L-SLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG 377 (417)
T ss_pred H-H-HccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcc
Confidence 1 1 22221110 001223333444555556666677788889998877766665555444442 2334444555
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 404 SLQAMLIVMVVGICVALVGILFLTIQV 430 (439)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
++...++.+....+++.+.++.+..|-
T Consensus 378 ~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 378 SYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 788889999998888888776666554
No 77
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.87 E-value=1.3e-18 Score=173.42 Aligned_cols=350 Identities=13% Similarity=0.104 Sum_probs=204.2
Q ss_pred hhhccCCCCchHHHHHHHHH--HHhhhhhHHHHHHHh-----chhH-HHHHHhHHHHHHHHh-hhc---chhhHHHHHHH
Q 013645 52 TTVNTEGNLGTISLGILYTS--FTCFSLVASLVVRVL-----GSKN-ALILGTTGYWLFVAA-NLF---PSWYTMVPASL 119 (439)
Q Consensus 52 ~~l~~~~~~g~~~~~~~~~~--~~~~~~~~g~l~dr~-----G~r~-~l~~g~~~~~~~~~~-~~~---~~~~~li~~r~ 119 (439)
|...+|.+......+.+... ..+.+++.|+++||+ |||| .+..+.++.++.... ... .+++.+++..+
T Consensus 23 ~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~ 102 (402)
T PRK11902 23 QAWMTVEGLDIQTIGFFSLVGQAYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAV 102 (402)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHH
Confidence 33444445554444333322 247789999999999 8876 677766665544333 222 35666777778
Q ss_pred HhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHH
Q 013645 120 YLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVF 199 (439)
Q Consensus 120 i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~ 199 (439)
+.++..+...++..+++.|+. |++||+++.++...+.++|.++|+.++..+.... .+||.. |++.
T Consensus 103 ~~~~~~~~~~~~~~al~~~~~----------~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~----~gw~~~-f~i~ 167 (402)
T PRK11902 103 LVAFLSASQDIVFDAYSTDVL----------HPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV----LGWGNT-YLLM 167 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhc----------ChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc----cCHHHH-HHHH
Confidence 888888888889899998887 7889999999999999999999988877775421 268875 4444
Q ss_pred HHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhh-hc
Q 013645 200 LGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI-VT 278 (439)
Q Consensus 200 ~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~-~~ 278 (439)
+++.++..+..+++|||++.++++ + +..++. .++..+.+|+|+++......+.......+.....++.+ .+
T Consensus 168 a~~~l~~~l~~~~~~e~~~~~~~~--~---~~~~~~---~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~ 239 (402)
T PRK11902 168 AGLMLAGALTTLWAPEPEVPARPP--R---SLGEAV---VGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRG 239 (402)
T ss_pred HHHHHHHHHHHHhcCCCccccccc--c---hhHHHH---HHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 444444444445667654422111 0 001111 22345677888887655443332222111111222222 22
Q ss_pred ccccccchHHHHHHHH-HHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHH-HHHHhhccCCCCccchHHHHHHH----
Q 013645 279 PALGVSGVGGAMAVYG-AFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVF-LWILINYSVTSGVLGTLYPLIMA---- 352 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~-i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---- 352 (439)
.+.+.+..+.+....+ ++.+++.++.|++.||+++|+.+ ..+..+..+.. .+......+++ .....+..
T Consensus 240 ~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l-~~~~~~~~l~~l~~~~~~~~~~~----~~~~~~~~~~~~ 314 (402)
T PRK11902 240 AGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSL-MLFGVLQAVSNLGYWVLAVTPKH----LWTMALAIGIEN 314 (402)
T ss_pred cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHhcCCc----HHHHHHHHHHHH
Confidence 3556667777765554 45789999999999999977643 33333333221 11112232222 13333333
Q ss_pred HHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHH----HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 353 ALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIA----VVFFIGPYISLQAMLIVMVVGICVALVGILFLTI 428 (439)
Q Consensus 353 ~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~----i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (439)
+..|++.+...+....++.+.+|.+. ++.+....+++.. ++-.+....++...+.+.+++.+++.+..+...+
T Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~ 391 (402)
T PRK11902 315 LCGGMGTAAFVALLMALCNRSFSATQ---YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMRG 391 (402)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34556666666666677777666443 3333333333332 3333344567778888888888888777766666
Q ss_pred HHhh
Q 013645 429 QVEK 432 (439)
Q Consensus 429 ~~~~ 432 (439)
+.+|
T Consensus 392 ~~~~ 395 (402)
T PRK11902 392 TIGR 395 (402)
T ss_pred hccc
Confidence 6544
No 78
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.87 E-value=6.8e-19 Score=175.02 Aligned_cols=366 Identities=13% Similarity=0.085 Sum_probs=206.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhh-ccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHH
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLETTV-NTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~l-~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~ 102 (439)
++.+.+....++.+.++....+..+.. .++.+.... ..++......+++++.|+++||+|||+.+..+...+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVL 81 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 456677667777777666555544433 333344433 345555566788899999999999999998877655432
Q ss_pred HHhh----hcc-----hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhh
Q 013645 103 VAAN----LFP-----SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVG 173 (439)
Q Consensus 103 ~~~~----~~~-----~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG 173 (439)
.... ..+ .+..+++.|++.|++.+...+...++..+.. +++++.+|......++|.++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------------~~~~~~~g~~~~~~~~g~~~g 149 (396)
T TIGR00882 82 FAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS------------RNSNFEYGKARMFGCVGWALC 149 (396)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh------------hhcccccchhhhhcccHHHHH
Confidence 2221 111 2333455677788777766666555544332 234556677777778999999
Q ss_pred hHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHH
Q 013645 174 NLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLL 253 (439)
Q Consensus 174 ~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (439)
+.+++.+.. .+|+.. |.+.+++.++..+..++.++++++++++.++.+.+++ +++.++..+.+|||+++.
T Consensus 150 ~~~~g~l~~------~~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~ 219 (396)
T TIGR00882 150 ASIAGILFS------IDPQIV-FWLGSGFALILMLLLMFAKPKAPSSATVANALGANAS---AFSLKLALELFRQRKFWM 219 (396)
T ss_pred HHHHhhhhc------cCchHH-HHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccC---CCCHHHHHHHHcCCcHHH
Confidence 998876643 257764 4444555554444434433322111110000000000 011224557789998866
Q ss_pred HHHHHHHhhHHHHHHHhhcchh----hhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHH
Q 013645 254 IIPLFAYSGLQQAFVWAEFTKE----IVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVF 329 (439)
Q Consensus 254 l~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~ 329 (439)
..+..+...........+++.+ ....+.+.+..|.......+...++....|++.||+++|+.+ ..+.++.++.+
T Consensus 220 ~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l-~~~~~l~~l~~ 298 (396)
T TIGR00882 220 FVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNAL-LIAGTIMSVRI 298 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH-HHHHHHHHHHH
Confidence 5543332221111111122222 111223344567777778888889999999999999988744 45555555443
Q ss_pred HHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHH-HHHHHHHHHHHHHHHhh----hh
Q 013645 330 LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQ-LKVWQCASIAVVFFIGP----YI 403 (439)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~-~~~~~~~g~~i~~~i~~----~~ 403 (439)
. ...+.++. ..+++..++.|++..........+..+..|++.+ .+.+. ++....+|..+++.+.+ ..
T Consensus 299 ~--~~~~~~~~-----~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~ 371 (396)
T TIGR00882 299 I--GSSFATTA-----LEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI 371 (396)
T ss_pred H--HHHhcCCh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc
Confidence 2 22333332 4455667778887766555555666776766543 33444 56666777766654443 33
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 013645 404 SLQAMLIVMVVGICVALVGI 423 (439)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~ 423 (439)
++...+.+.+++.++++..-
T Consensus 372 G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 372 GFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred ccHHHHHHHHHHHHHHHHHH
Confidence 56677777766666555443
No 79
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.87 E-value=1.1e-18 Score=177.41 Aligned_cols=399 Identities=10% Similarity=0.032 Sum_probs=229.3
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhh-hhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHH-hchhHHHHHHhH
Q 013645 24 KNYTRDVHILSCAFLLIFLAYGAAQ-NLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRV-LGSKNALILGTT 97 (439)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr-~G~r~~l~~g~~ 97 (439)
+++.|.++.+....++--.+|+... .+...+.++.+.+... .+.+.....+..+++|+++|| +||||++..|.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 3455666666666666555655544 3333333333333322 233333445566789999999 999999999999
Q ss_pred HHHHHHHhh-hcch-hhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCccc--chhhhhHHHHHHHHHhhhhh
Q 013645 98 GYWLFVAAN-LFPS-WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGT--VIGSFNGEFWGMFASHQFVG 173 (439)
Q Consensus 98 ~~~~~~~~~-~~~~-~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~--~rg~~~g~~~~~~~~G~~iG 173 (439)
.+.+..... ..++ ...++++|+++|+|.|...+...+.++|.. |++ +|+++++++....++|..+|
T Consensus 90 ~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~----------p~~~~~~~~~~~~~~~~~nig~~~g 159 (489)
T PRK10207 90 VLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCY----------PPKDPRLDGAFTLFYMSINIGSLIS 159 (489)
T ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhc----------CCCchhhhcchhHHHHHHHHHHHHH
Confidence 887765543 3333 334557899999999999998889998887 433 56889999999999999999
Q ss_pred hHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCc----cccccccccchh------------------h
Q 013645 174 NLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED----KGEKETADASVN------------------F 231 (439)
Q Consensus 174 ~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~----~~~~~~~~~~~~------------------~ 231 (439)
+.+++.+.++ .|||+.+++ ..+...++++...+.++..+ +++++..+.... .
T Consensus 160 ~~l~g~l~~~-----~gw~~~F~i-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~ 233 (489)
T PRK10207 160 LSLAPVIADK-----FGYSVTYNL-CGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMH 233 (489)
T ss_pred HHHHHHHHHh-----hChHHHHHH-HHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 9999988764 358875443 33323333333333332111 110000000000 0
Q ss_pred hhhHH----------------HHHHHHHHhhccchhHHHHHH----HHHhhHHHH-HHHhhcchhhhccc-cccc-chHH
Q 013645 232 YSYLV----------------SLSKSITTLLADVRMLLIIPL----FAYSGLQQA-FVWAEFTKEIVTPA-LGVS-GVGG 288 (439)
Q Consensus 232 ~~~~~----------------~~~~~~~~~~~~~~~~~l~~~----~~~~g~~~~-~~~~~~~~~~~~~~-~~~~-~~g~ 288 (439)
..... .+.+...+..|+|.+...... +++..+.+. +..+.+.+....+. .|.. ....
T Consensus 234 ~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~ 313 (489)
T PRK10207 234 NVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVS 313 (489)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHH
Confidence 00000 000000122333333221111 112222222 22222322111111 1222 1233
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCCCcce------ehhhHHHHHHHHHHHHH---hhccCCCCccchHHHHHHHHHHhhhh
Q 013645 289 AMAVYGAFDAICSLAAGRLTTGLPSITF------IVSGGAIAQVVVFLWIL---INYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 289 ~~~~~~i~~~ig~~~~G~l~d~~~~r~~------~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
+..++.+..++.+++.+++.||+++|+. .+..|.++.++++..+. ............++.....++.|+|.
T Consensus 314 ~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge 393 (489)
T PRK10207 314 FQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGE 393 (489)
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHH
Confidence 3445666777888888999999987642 23466666555543110 11211111112355667889999999
Q ss_pred hhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhhhh--------------hHHHHHHHHHHHHHHHHHHHH
Q 013645 360 GVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPYI--------------SLQAMLIVMVVGICVALVGIL 424 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~~~--------------~~~~~~~~~~~~~~~~~~~~~ 424 (439)
....+...+.+.+..|++.. .+.|++++.+.+|..++-.++... .+.+.+..++...++..+.++
T Consensus 394 ~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~ 473 (489)
T PRK10207 394 LFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMA 473 (489)
T ss_pred HHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998864 478898888888888776554211 245666777777777777777
Q ss_pred HHHHHHhhhhcCCC
Q 013645 425 FLTIQVEKAFYSPR 438 (439)
Q Consensus 425 ~~~~~~~~~~~~~~ 438 (439)
...++++|..+.+.
T Consensus 474 ~~~~~~~~~~~~~~ 487 (489)
T PRK10207 474 LMVPWLNRMINTPE 487 (489)
T ss_pred HHHHHHHHHhcccc
Confidence 77787877654443
No 80
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.86 E-value=5.2e-19 Score=173.19 Aligned_cols=319 Identities=11% Similarity=0.090 Sum_probs=191.6
Q ss_pred hHhhhccCCCCchHHHHHHH---HHHHhhhhhHHHHHHHh-----chhHHH-HHHhHHHHHHHHh-hhc---chhhHHHH
Q 013645 50 LETTVNTEGNLGTISLGILY---TSFTCFSLVASLVVRVL-----GSKNAL-ILGTTGYWLFVAA-NLF---PSWYTMVP 116 (439)
Q Consensus 50 ~~~~l~~~~~~g~~~~~~~~---~~~~~~~~~~g~l~dr~-----G~r~~l-~~g~~~~~~~~~~-~~~---~~~~~li~ 116 (439)
..+.+.+|.+.+....+... ..++ .+++.|+++||+ ||||.+ ..+.+..++.+.. .+. .+...+..
T Consensus 10 ~~~~~~~~~g~s~~~~g~~~~~~~~~~-~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~ 88 (356)
T TIGR00901 10 TLPYWLRSKNVSLKTIGFFSLVGLPYS-LKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAG 88 (356)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHH
Confidence 34444555555554433332 2233 388999999998 899975 5566555554332 232 34555666
Q ss_pred HHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCC---CCCCcch
Q 013645 117 ASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG---GSTSGTT 193 (439)
Q Consensus 117 ~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~---~~~~w~~ 193 (439)
.+++.|.+.+...++..++++|+. |+|+|+++.|+...+..+|.++|+.++..+..+.+. ..++||.
T Consensus 89 ~~~~~~~~~~~~~~~~~a~~~~~~----------~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~ 158 (356)
T TIGR00901 89 LAFLIAFFSATQDIALDAWRLEIL----------SDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGY 158 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC----------CHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHH
Confidence 777888888888888888888887 789999999999999999999999988776544210 1134887
Q ss_pred HHHHHHHHHHHHHHHHHHh-ccCCCccccccccccchhhhhhHHHHHHHHHHhhccch---hHHHHHHHHHhhHHHHHHH
Q 013645 194 LLFIVFLGVITLGTILMCF-LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVR---MLLIIPLFAYSGLQQAFVW 269 (439)
Q Consensus 194 ~~~~~~~~~~~l~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~~~~~~~ 269 (439)
. |++.+++.++..+..++ .||+++.++++ + +..++.++ ..++.+++|+ .+.+....+..........
T Consensus 159 ~-f~i~ai~~l~~~~~~~~~~~e~~~~~~~~-~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (356)
T TIGR00901 159 I-FFWTALLILPGLLVTLFLAKEPQEDASVP-K----PLTQAVLK---PIREFFQRKNMIQALLLLLLIVLYKLGDSAAT 229 (356)
T ss_pred H-HHHHHHHHHHHHHHHHHhccCCCcccccc-h----hHHHHHHH---HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 4 44455555554444333 45543321111 0 01111122 2334555654 4444333332332222222
Q ss_pred hhcchhhhcccccccchHHHHHHHH-HHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCC-----cc
Q 013645 270 AEFTKEIVTPALGVSGVGGAMAVYG-AFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSG-----VL 343 (439)
Q Consensus 270 ~~~~~~~~~~~~~~~~~g~~~~~~~-i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~ 343 (439)
+.++.++.+.+.+.++.+.+....+ ++.+++.++.|++.||+++|+.+ ..+.++.++.... .....++.. ..
T Consensus 230 ~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 307 (356)
T TIGR00901 230 VLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL-LLFGIVQALTNAG-FVWLASNGHHDGITFP 307 (356)
T ss_pred HHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHHHHHHHHHH-HHHHHhcCcccccccc
Confidence 3444444334556667777766656 56789999999999999987654 3445544433221 111111100 00
Q ss_pred chHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHH
Q 013645 344 GTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQC 390 (439)
Q Consensus 344 ~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~ 390 (439)
+...+..+.++.+++.+..++...+++.+.+|+|.+ +.+|.++..++
T Consensus 308 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 308 HLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 124456677788999999999999999999998864 57787766543
No 81
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1.1e-18 Score=172.98 Aligned_cols=316 Identities=16% Similarity=0.071 Sum_probs=192.7
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh----hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHH
Q 013645 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA----NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (439)
Q Consensus 64 ~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~----~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~ 139 (439)
..+++..+.++|++++++++||+|||..+.++.+...+.... ...+++..+++.|++.|+..|.....++-|+.|.
T Consensus 65 ~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~ 144 (485)
T KOG0569|consen 65 IVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEI 144 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhc
Confidence 356667777888999999999999999999988765443332 3468899999999999999999999999999999
Q ss_pred hhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCcc
Q 013645 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK 219 (439)
Q Consensus 140 ~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 219 (439)
+ |++.||....+...+..+|..+|..++..-..... ..|... +....+.+++..+...++||.++.
T Consensus 145 s----------P~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~---~~W~~l-~~~~~i~~~~~l~~l~~~PESPk~ 210 (485)
T KOG0569|consen 145 S----------PKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTE---DLWPYL-LAFPLIPALLQLALLPFLPESPKY 210 (485)
T ss_pred C----------hhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCC---cchHHH-HHHHHHHHHHHHHHHhcCCCCcch
Confidence 8 89999998888887778887777766554332221 246552 333344444555556788986541
Q ss_pred -----cccccc----------c-----cchhh-hhhHH----HHHHHHHHhhccchhHHHHHHHHHhhHH-H--H-HHHh
Q 013645 220 -----GEKETA----------D-----ASVNF-YSYLV----SLSKSITTLLADVRMLLIIPLFAYSGLQ-Q--A-FVWA 270 (439)
Q Consensus 220 -----~~~~~~----------~-----~~~~~-~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~--~-~~~~ 270 (439)
+++++. + .+... ..+.+ ++..++.++++||+...-....+..... + + ....
T Consensus 211 Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~ 290 (485)
T KOG0569|consen 211 LLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIF 290 (485)
T ss_pred HHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeH
Confidence 111100 0 00000 00000 0112456777777765432221111111 1 1 1111
Q ss_pred hcchh-hhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHH--hhccCCC-CccchH
Q 013645 271 EFTKE-IVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL--INYSVTS-GVLGTL 346 (439)
Q Consensus 271 ~~~~~-~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~--~~~~~~~-~~~~~~ 346 (439)
.|... +.+.+++....-+.....++.+.+.++++..+.||.|||.. ++.++.++.++.+.+. ....... ++ ...
T Consensus 291 ~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpL-ll~~~~~~~~~~~~~~~~~~l~~~~~~~-~~y 368 (485)
T KOG0569|consen 291 FYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPL-LLISLSLMAVALLLMSIALFLSNSFGSW-LSY 368 (485)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhH-HHH
Confidence 22222 23345666666777788899999999999999999998874 4556555544322111 1111111 11 011
Q ss_pred HHHHHHHHHhhhhhhh-hhhHHHHHHhhccCCchh-hHHHHHHHHHHHHHH
Q 013645 347 YPLIMAALLGIGDGVL-NTQLSALLGILFKHDTEG-AFAQLKVWQCASIAV 395 (439)
Q Consensus 347 ~~~~~~~l~G~~~~~~-~~~~~a~~~~~~p~~~~~-a~s~~~~~~~~g~~i 395 (439)
..+++.+++.+..+.. .|..+-+.+|++|++.|+ |.+.-...++++..+
T Consensus 369 ~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fi 419 (485)
T KOG0569|consen 369 LCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFI 419 (485)
T ss_pred HHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHH
Confidence 2345555555555444 566777888999987664 566666666666543
No 82
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.85 E-value=6e-20 Score=172.77 Aligned_cols=226 Identities=19% Similarity=0.165 Sum_probs=168.2
Q ss_pred chHHHHHHHHHHHhhhh----hHHHHHHHhchhHHHHHHhHHHHHHHHhh-hcchhhHHHHHHHHhhhHHHHHHhhhhhH
Q 013645 61 GTISLGILYTSFTCFSL----VASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTY 135 (439)
Q Consensus 61 g~~~~~~~~~~~~~~~~----~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~ 135 (439)
.+...+++++++++.++ +.|++.||+|+|..+++|.......++.+ +..+++.++++|.++|+|.+..+++..+.
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglam 183 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAM 183 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHH
Confidence 34567788888887664 68999999999999999999877777765 56888899999999999999999999999
Q ss_pred HHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccC
Q 013645 136 LTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (439)
Q Consensus 136 i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~ 215 (439)
++|..+ ++++||+++|+...+.++|..+||++|+.+.+..+ +...|++.+++.++-..+-+++-|
T Consensus 184 lAd~f~---------~d~er~~vmGialgfislG~lvgPpfGGilYe~~G------k~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 184 LADVFP---------EDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG------KSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred HHHHcc---------cchhhhHHHHHHHHHHhccceecCCcccchHhhcC------CcCcHHHHHHHHHHHHHHHHheeC
Confidence 999974 56779999999999999999999999999876532 234577777777776666666655
Q ss_pred CCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhccccccc-chHHHHHHHH
Q 013645 216 EEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS-GVGGAMAVYG 294 (439)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~ 294 (439)
|.+.++++.. +. ..++++++||.++........++...++.-+.++....++-..+. ..|..+.-..
T Consensus 249 p~~~~~~~~~-----~~-------~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~ 316 (464)
T KOG3764|consen 249 PTEMDPDSTE-----QG-------TPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPAS 316 (464)
T ss_pred ccccCccccc-----cC-------ccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccc
Confidence 5432221100 00 124578899999887776666777777654444432211111233 4666666777
Q ss_pred HHHHHHHHhhhhhhcCCCC
Q 013645 295 AFDAICSLAAGRLTTGLPS 313 (439)
Q Consensus 295 i~~~ig~~~~G~l~d~~~~ 313 (439)
+.-.++..+.|.+.||++.
T Consensus 317 ~~y~ig~~lfg~la~k~~~ 335 (464)
T KOG3764|consen 317 LSYAIGTNLFGKLADKYPH 335 (464)
T ss_pred cchhccCchHHHHHHhcCc
Confidence 8889999999999999983
No 83
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.85 E-value=6.3e-19 Score=178.43 Aligned_cols=374 Identities=14% Similarity=0.082 Sum_probs=240.8
Q ss_pred hhHHHHHHHHHHHHHHHhhh---hhhHhhhccCCC----CchHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHH
Q 013645 28 RDVHILSCAFLLIFLAYGAA---QNLETTVNTEGN----LGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~---~~~~~~l~~~~~----~g~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~ 100 (439)
+-|+++..++++....+... ..+.+.+.++.+ ...+..++..+++.+++++.+.+.||+|.|.+.++|.++.+
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHH
Confidence 34555555656655554322 223333333322 22344667777778889999999999999999999999887
Q ss_pred HHHH-hhhcchhh-HHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHH
Q 013645 101 LFVA-ANLFPSWY-TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (439)
Q Consensus 101 ~~~~-~~~~~~~~-~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~ 178 (439)
+..+ +.++++.+ .++...++.|+|.|..+..+-..+..+ ++|||+.+.|+-.++.++|..+=+.+..
T Consensus 123 ~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~Y-----------F~kkR~lA~Gia~~GsG~G~~~~~~l~~ 191 (509)
T KOG2504|consen 123 LGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTY-----------FEKKRALATGIAVSGTGVGTVVFPPLLK 191 (509)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhH-----------hHHHHHHHHhhhhccCCcceeeHHHHHH
Confidence 7654 44566654 556679999999999998877777766 5789999999998888888777666666
Q ss_pred HhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCC-cc--c---------------------c----cc-ccc---
Q 013645 179 AVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE-DK--G---------------------E----KE-TAD--- 226 (439)
Q Consensus 179 ~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~-~~--~---------------------~----~~-~~~--- 226 (439)
.+... .|||.... ++..+.+-.+.....+++.. +. + + ++ ..+
T Consensus 192 ~l~~~-----~G~r~~~l-~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (509)
T KOG2504|consen 192 YLLSK-----YGWRGALL-IFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSL 265 (509)
T ss_pred HHHHH-----hCcHHHHH-HHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccc
Confidence 66543 46888644 34554543433344444411 00 0 0 00 000
Q ss_pred --c----chhh-hh--hHHHHHH-HHHHhhccchhHHHHHHH--HHhhHHHHHHHhhcchhhhcccccccchHHHHHHHH
Q 013645 227 --A----SVNF-YS--YLVSLSK-SITTLLADVRMLLIIPLF--AYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYG 294 (439)
Q Consensus 227 --~----~~~~-~~--~~~~~~~-~~~~~~~~~~~~~l~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 294 (439)
. +.++ .. +.+..+. --.++++||.++.+.... ...|+..-+ ..++.+..+.+++.+...+.....+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~--~~l~~~~~~~g~~~~~aa~l~Siig 343 (509)
T KOG2504|consen 266 SNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPF--VYLPSYAKSLGLSSNDAAFLLSIIG 343 (509)
T ss_pred cchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHH--HHHHHHHhhcCCChhhhHHHHHHHH
Confidence 0 0000 00 1111110 014678888877665432 223332211 1333333345566667888889999
Q ss_pred HHHHHHHHhhhhhhcCCCCc-ceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhh
Q 013645 295 AFDAICSLAAGRLTTGLPSI-TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL 373 (439)
Q Consensus 295 i~~~ig~~~~G~l~d~~~~r-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~ 373 (439)
+.+++++++.|++.|+...+ ..+..++.+...++.. ......+ +..+.....++|++.+.+....+-++.|+
T Consensus 344 i~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~--~~p~~~~-----~~~l~~~~~~fG~~~g~~~~l~~~i~~~~ 416 (509)
T KOG2504|consen 344 VSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARL--FLPFATT-----YVGLIVFSILFGFCVGSFSSLTPVILVDL 416 (509)
T ss_pred HhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHH--HHHHhcc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998733 3233334444443322 2223222 46778889999999999998888899999
Q ss_pred ccCCc-hhhHHHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 374 FKHDT-EGAFAQLKVWQCASIAVVFFIGP-----YISLQAMLIVMVVGICVALVGILFLT 427 (439)
Q Consensus 374 ~p~~~-~~a~s~~~~~~~~g~~i~~~i~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (439)
.+.++ ..++|+..+++++++.+++-+.+ ..+|...++...+..+++...++...
T Consensus 417 ~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 417 VGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred cChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 98887 56999999999999988765543 33688888888888888887776555
No 84
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.85 E-value=1.2e-17 Score=163.62 Aligned_cols=316 Identities=13% Similarity=0.065 Sum_probs=205.0
Q ss_pred hhhhhHhhhccCCCCch-----HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-hcchhhHHHHHHH
Q 013645 46 AAQNLETTVNTEGNLGT-----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASL 119 (439)
Q Consensus 46 ~~~~~~~~l~~~~~~g~-----~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~ 119 (439)
+.....+.+.+|.++.. ...+.++..|++++++.|+++||+|.|+++.++.+.+++..+.. +.+++..+.+.|+
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~ 123 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEV 123 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345555555544433 24577788899999999999999999999999999998877764 6678999999999
Q ss_pred HhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHH--HH
Q 013645 120 YLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLL--FI 197 (439)
Q Consensus 120 i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~--~~ 197 (439)
+.|+++|..+ +...++..++ |+++|+++.|++.++..+|.++|++++..+. . .+||... ..
T Consensus 124 llGvaEA~~~-A~~syI~~Wf----------P~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s-----~gWr~y~~Ln~ 186 (511)
T TIGR00806 124 FYSVTMAARI-AYSSYIFSLV----------PPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-T-----LGWISYSTLNI 186 (511)
T ss_pred HHHHHHHHHH-HHHHHHHHHC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-----cCchhHHHHHH
Confidence 9999999999 8889999887 8999999999999999999999999888843 2 3576521 22
Q ss_pred HHHHHHHHHHHHHHhccCCCcc----ccc----------ccc-ccch-hhh--------hhHHHHHHHHHHhhccchhHH
Q 013645 198 VFLGVITLGTILMCFLRKEEDK----GEK----------ETA-DASV-NFY--------SYLVSLSKSITTLLADVRMLL 253 (439)
Q Consensus 198 ~~~~~~~l~~~~~~~l~~~~~~----~~~----------~~~-~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~ 253 (439)
+-.....+++++++++|.+++. +++ +.. +.+. +.. ...+....+.+...+||+++.
T Consensus 187 Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~ 266 (511)
T TIGR00806 187 ISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLL 266 (511)
T ss_pred HHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhh
Confidence 2333344666777899865541 110 000 0000 000 112223345566778888643
Q ss_pred --HHHHHHHhhHHHHHHHhhcchhh-hc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHH--HHHHH
Q 013645 254 --IIPLFAYSGLQQAFVWAEFTKEI-VT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGA--IAQVV 327 (439)
Q Consensus 254 --l~~~~~~~g~~~~~~~~~~~~~~-~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~--~~~~~ 327 (439)
+.-.+..+|+.+.. .|.+.+ .+ ++-..+..|.+-++..+...+.++..|.+..+..+.. .+.++. ++.+.
T Consensus 267 WSlWwa~a~~g~~qv~---~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~-~l~l~v~s~~~~g 342 (511)
T TIGR00806 267 WSLWWVFNSAGYYLIT---YYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWS-KLLIAVVSAIQAG 342 (511)
T ss_pred hhHHHHHHhhHHHHHH---HHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhH-HHHHHHHHHHHHH
Confidence 33344455654422 122211 00 1101125666666667777788888898865543211 122222 22332
Q ss_pred HHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHH
Q 013645 328 VFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQ 389 (439)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~ 389 (439)
.+ +++.++++ .++.+++.++|+..+....+...+-++....+|. +-.||+.++..
T Consensus 343 ll--~~m~~t~~-----Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvA 398 (511)
T TIGR00806 343 LV--FWMSQSHD-----IWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVA 398 (511)
T ss_pred Hh--hhhhcccc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHH
Confidence 22 24566544 4788999999999998888888888887776665 44678777754
No 85
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.85 E-value=7.9e-18 Score=171.24 Aligned_cols=325 Identities=14% Similarity=0.090 Sum_probs=207.9
Q ss_pred HHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh--h--h--cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhh
Q 013645 69 YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA--N--L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (439)
Q Consensus 69 ~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~--~--~--~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~ 142 (439)
.....+.++++|.++||+.||++++.+-+...+..+. . . ..+.+.+++..++.|++.+...|+..+.+.+..
T Consensus 55 ~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV-- 132 (524)
T PF05977_consen 55 TLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELV-- 132 (524)
T ss_pred HHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 3445567889999999999999999988765432221 1 1 246677778899999999999999999999887
Q ss_pred hhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccc
Q 013645 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEK 222 (439)
Q Consensus 143 ~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~ 222 (439)
|+++..++.++.....++..++||.+++.+....+ -.. .|.+-++..++........|++.++++.
T Consensus 133 --------~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G-----~~~-~f~inalsfl~~i~~l~~~~~~~~~~~~ 198 (524)
T PF05977_consen 133 --------PKEDLPAANALNSISFNIARIIGPALGGILVAFFG-----AAA-AFLINALSFLISILALLRWKPPPPPSSL 198 (524)
T ss_pred --------cHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHH-----HHH-HHHHHHHHHHHHHHHHHHcccccccccc
Confidence 78899999999999999999999999988765321 112 2333333233322222334332221111
Q ss_pred cccccchhhhhhHHHHHHHHHH-hhccchhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHH
Q 013645 223 ETADASVNFYSYLVSLSKSITT-LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAIC 300 (439)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig 300 (439)
+++++.+++++-.+ ..++|.+.......+..++..+..+..+|....+ .+.+....|++.+..++|.++|
T Consensus 199 --------~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~G 270 (524)
T PF05977_consen 199 --------PRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILG 270 (524)
T ss_pred --------chhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHH
Confidence 01122223333223 2345555544333333343333333344432221 2345567899999999999999
Q ss_pred HHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-h
Q 013645 301 SLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-E 379 (439)
Q Consensus 301 ~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~ 379 (439)
+++.+++.+|.++++ ++..+.+..+++.. .+.+.++ .+...++.++.|++.....+..++.+-+..|++. +
T Consensus 271 al~~~~l~~~~~~~~-lv~~~~~~~a~~~~--~lal~~~-----~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~G 342 (524)
T PF05977_consen 271 ALLLPRLRRRLSSRR-LVLLASLLFALALL--LLALSPS-----FWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRG 342 (524)
T ss_pred HHHHHHhhcccCcch-hhHHHHHHHHHHHH--HHhcchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHh
Confidence 999999999988665 34455555554432 3344433 2556677888999999999899999999999885 5
Q ss_pred hhHHHHHHHHHHHHHHHHHH----hhhhhHHHHHHHHHHHHHHHHHHHHH
Q 013645 380 GAFAQLKVWQCASIAVVFFI----GPYISLQAMLIVMVVGICVALVGILF 425 (439)
Q Consensus 380 ~a~s~~~~~~~~g~~i~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (439)
+++|+++.....+..+|..+ ....+....+.+.++.++++.+..+.
T Consensus 343 Rv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 343 RVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 68888777766666555444 34456666666555555555554443
No 86
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.85 E-value=2.1e-17 Score=167.94 Aligned_cols=394 Identities=9% Similarity=0.004 Sum_probs=225.3
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhhhhHhhh-ccC--CCCchHH----HHHHHHHHHhhhhhHHHHHHH-hchhHHHHHHh
Q 013645 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTV-NTE--GNLGTIS----LGILYTSFTCFSLVASLVVRV-LGSKNALILGT 96 (439)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l-~~~--~~~g~~~----~~~~~~~~~~~~~~~g~l~dr-~G~r~~l~~g~ 96 (439)
++.+.++.+....++.-.+++......+.. .++ .+.+... .+.......++++++|+++|| +|||+++.++.
T Consensus 7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~ 86 (475)
T TIGR00924 7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGG 86 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHH
Confidence 455566666666666666666555444433 333 3443332 344455566788899999999 89999999999
Q ss_pred HHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhH
Q 013645 97 TGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNL 175 (439)
Q Consensus 97 ~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~ 175 (439)
+++++..+. ...+++..+++.|++.|+|.|...++..+.+++..++. ++++|+++++++....++|..+|+.
T Consensus 87 ~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~-------~~~~r~~~~~~~~~~~niG~~ig~~ 159 (475)
T TIGR00924 87 IVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERG-------DMPRRDGGFTLFYMSINIGSFISPL 159 (475)
T ss_pred HHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCC-------CcccccceehhHHHHHHHHHHHHHH
Confidence 988775544 34566777778999999999998888888888887310 1135889999999999999999999
Q ss_pred HHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCc-cccccc--cccchhhhhhH-----------------
Q 013645 176 ITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED-KGEKET--ADASVNFYSYL----------------- 235 (439)
Q Consensus 176 i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~-~~~~~~--~~~~~~~~~~~----------------- 235 (439)
+++.+..+ .+|+..++ +.++..+++.+..++.+++.+ .++++. ++++.......
T Consensus 160 l~g~l~~~-----~g~~~~f~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (475)
T TIGR00924 160 LAGVIAEN-----YGYHVGFN-LAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLM 233 (475)
T ss_pred HHHHHHHh-----cChHHHHH-HHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 98887643 35876433 334444445444444443211 110000 00000000000
Q ss_pred ----HHH--------------HHHHH-----HhhccchhHHHHHHH-----HHhhHHHHH-HHhhcchhhhccccc-cc-
Q 013645 236 ----VSL--------------SKSIT-----TLLADVRMLLIIPLF-----AYSGLQQAF-VWAEFTKEIVTPALG-VS- 284 (439)
Q Consensus 236 ----~~~--------------~~~~~-----~~~~~~~~~~l~~~~-----~~~g~~~~~-~~~~~~~~~~~~~~~-~~- 284 (439)
..+ .+... +.-+ ++...+.+++ ++..+.|.. ..+.+...-.+...+ .+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~i 312 (475)
T TIGR00924 234 HHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVAR-NKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSV 312 (475)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHH-hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEE
Confidence 000 00000 0001 1111111111 112222211 111221110011111 11
Q ss_pred chHHHHHHHHHHHHHHHHhhh----hhhcCCCCccee--hhhHHHHHHHHHHHHHh--hccCCCCccchHHHHHHHHHHh
Q 013645 285 GVGGAMAVYGAFDAICSLAAG----RLTTGLPSITFI--VSGGAIAQVVVFLWILI--NYSVTSGVLGTLYPLIMAALLG 356 (439)
Q Consensus 285 ~~g~~~~~~~i~~~ig~~~~G----~l~d~~~~r~~~--~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~G 356 (439)
..+.+..+.++..++.+++.. ++.||..+.... +.+|.++.++++..+.. ...++.....+++.....++++
T Consensus 313 p~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~ 392 (475)
T TIGR00924 313 PVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQT 392 (475)
T ss_pred CHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 256667778888887777644 555552211111 24567666655432211 1111110112466788999999
Q ss_pred hhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013645 357 IGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGILFLTIQVE 431 (439)
Q Consensus 357 ~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
+|+....|..++++.+..|++. +.+.|.+.+...+|..++..+.+. .++...+..+.+.+++..+..+.+.++++
T Consensus 393 ~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 393 LGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVPWLN 472 (475)
T ss_pred HHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999875 457888888888888877555432 23445556666666666776777777776
Q ss_pred h
Q 013645 432 K 432 (439)
Q Consensus 432 ~ 432 (439)
|
T Consensus 473 k 473 (475)
T TIGR00924 473 R 473 (475)
T ss_pred h
Confidence 5
No 87
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.84 E-value=3.2e-18 Score=162.23 Aligned_cols=323 Identities=13% Similarity=0.123 Sum_probs=214.9
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHH
Q 013645 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL 101 (439)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~ 101 (439)
.+..++.+..-|++.-........+.|++.+..|++.. ....++..|.++++++|++.+|+|+|+.+++|..++.+
T Consensus 11 ~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~av 90 (422)
T COG0738 11 VKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAV 90 (422)
T ss_pred ceeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHH
Confidence 44444555444444444444444566766655666653 34567888899999999999999999999999999888
Q ss_pred HHHhhh----cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHH
Q 013645 102 FVAANL----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177 (439)
Q Consensus 102 ~~~~~~----~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~ 177 (439)
....+. ..++..++++-++.|.|.+.+-++.+.|++... +|++..+.+.+.+.++.+|.++||+++
T Consensus 91 g~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg----------~~~~a~~rlnl~q~fn~lGa~~gp~~g 160 (422)
T COG0738 91 GAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLG----------KPESAAFRLNLAQAFNGLGAILGPLLG 160 (422)
T ss_pred HHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhC----------CchhHHHHHHHHHHhhhhHHHHHHHHH
Confidence 666542 457888888899999999999999999999887 666777889999999999999999988
Q ss_pred HHhhcCC-----C-CC--------CCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHH
Q 013645 178 LAVLKDD-----K-GG--------STSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSIT 243 (439)
Q Consensus 178 ~~l~~~~-----~-~~--------~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (439)
..+..+. . .. -.+++. .|.......++-.+.....|.|+.++.++ ++.+ . ++. ...
T Consensus 161 ~~lils~~~~~~~~~~~~~~~~~~~~~v~~-pYl~~~~~lvll~v~~~~~k~p~~~~~~~-~~~~---~---~~~--~~~ 230 (422)
T COG0738 161 SSLILSGVALTMSAAQILAIKGADASSVQF-PYLILAGLLVLLAVLILLSKLPDLQVAAP-SLGA---S---GSA--GLS 230 (422)
T ss_pred HHHHHhhhhhccCHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHhccCCcCCcccc-cccc---c---ccc--hHH
Confidence 7765421 0 00 012333 45544444433333334444444332221 1110 0 000 123
Q ss_pred HhhccchhHHHHH-HHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhH
Q 013645 244 TLLADVRMLLIIP-LFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGG 321 (439)
Q Consensus 244 ~~~~~~~~~~l~~-~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g 321 (439)
+++++|+++.-.. .++|.|.+.+.+ ++++.++.+ .+++..+.....+.++.+.++|++++-++..|+...+.+. ..
T Consensus 231 ~l~~~~~~~~gvl~~FlYVG~Eva~g-sfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~La-f~ 308 (422)
T COG0738 231 SLFQNKHLRLGVLAIFLYVGAEVAIG-SFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLA-FY 308 (422)
T ss_pred HHHhChHHHHHHHHHHHHHhHHHHHH-HHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH-HH
Confidence 5678888877544 567889887654 455544433 4455556777888999999999999988888887666443 33
Q ss_pred HHHHH-HHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch
Q 013645 322 AIAQV-VVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE 379 (439)
Q Consensus 322 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~ 379 (439)
+++.. .++ .....++ .+...+..+.|+..+...|+++++..+..|++.+
T Consensus 309 a~~~ill~~---~~~l~~g------~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts 358 (422)
T COG0738 309 ALIAILLLL---AVALIGG------VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTS 358 (422)
T ss_pred HHHHHHHHH---HHHHhcC------hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc
Confidence 33322 222 1223322 3455667778899999999999999999986654
No 88
>PTZ00207 hypothetical protein; Provisional
Probab=99.81 E-value=5.9e-17 Score=165.65 Aligned_cols=333 Identities=12% Similarity=0.090 Sum_probs=189.2
Q ss_pred HHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-hc------chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhh
Q 013645 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF------PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (439)
Q Consensus 71 ~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~~------~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~ 143 (439)
.++.+++++|++.||+|+|+++.++.+.+++..+.. .. ++++.+.+.|++.|+|.+..+++....+.+++
T Consensus 73 ~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F--- 149 (591)
T PTZ00207 73 AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF--- 149 (591)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence 445677789999999999999999999887755442 22 57888889999999999988888777766663
Q ss_pred hhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHH-HHHHHHhccCCCccc--
Q 013645 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-GTILMCFLRKEEDKG-- 220 (439)
Q Consensus 144 a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l-~~~~~~~l~~~~~~~-- 220 (439)
|++||++.|+...+.++|.++.+.+...+..+ +|+..++ ..+++.++ +++...++++|+...
T Consensus 150 --------p~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~------~~~~~fl-~l~vl~~vv~ll~~~~vr~p~~~~~~ 214 (591)
T PTZ00207 150 --------PSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD------NTSAYFF-FLMSFALVVGILAIVFMRLPPFHLTG 214 (591)
T ss_pred --------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hHHHHHH-HHHHHHHHHHHHHHhheeCCcchhhc
Confidence 57999999999999999987644433333221 2444222 22333332 222334444432110
Q ss_pred -------ccccc----------ccchh-----------------------------------------------------
Q 013645 221 -------EKETA----------DASVN----------------------------------------------------- 230 (439)
Q Consensus 221 -------~~~~~----------~~~~~----------------------------------------------------- 230 (439)
++|.. +++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ 294 (591)
T PTZ00207 215 YQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMA 294 (591)
T ss_pred ccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHh
Confidence 00000 00000
Q ss_pred --------------------------------hhhhHHHHHH--------HHHHhhccchhHHHHHHHHHhhHHHHHH-H
Q 013645 231 --------------------------------FYSYLVSLSK--------SITTLLADVRMLLIIPLFAYSGLQQAFV-W 269 (439)
Q Consensus 231 --------------------------------~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~~~g~~~~~~-~ 269 (439)
+......+.+ +.++.+++.++|+++..++ +|...+.. .
T Consensus 295 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~-cg~g~gl~~~ 373 (591)
T PTZ00207 295 FPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIF-CCVGAHFVII 373 (591)
T ss_pred hhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHH-HhhCchheee
Confidence 0000000000 3445555667777766544 33322221 1
Q ss_pred hhcchhhhcc-cccccc--hHHHHHHHHHHHHHHHHhhhhhh----cCCCC----cceehhhHHHHHHHHHHHHHhhccC
Q 013645 270 AEFTKEIVTP-ALGVSG--VGGAMAVYGAFDAICSLAAGRLT----TGLPS----ITFIVSGGAIAQVVVFLWILINYSV 338 (439)
Q Consensus 270 ~~~~~~~~~~-~~~~~~--~g~~~~~~~i~~~ig~~~~G~l~----d~~~~----r~~~~~~g~~~~~~~~~~~~~~~~~ 338 (439)
....+...+. +...+. ......++++++.+|++..|.++ +|..+ |...+.+..+ ..++.+++++..+
T Consensus 374 ~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p- 451 (591)
T PTZ00207 374 FNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLP- 451 (591)
T ss_pred ecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCC-
Confidence 1222221111 221111 22245678999999999999776 22211 1112122222 2233222222322
Q ss_pred CCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHH------HHHHhh-----------
Q 013645 339 TSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAV------VFFIGP----------- 401 (439)
Q Consensus 339 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i------~~~i~~----------- 401 (439)
. ..+++..++.|+++|...+...+.++|+|.+|-+.-|.......-+|+.+ |..++.
T Consensus 452 ~------~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~ 525 (591)
T PTZ00207 452 K------AALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCT 525 (591)
T ss_pred c------cHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeC
Confidence 1 36889999999999999999999999999966564333222222233322 233321
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 402 -YISLQAMLIVMVVGICVALVGILFLTIQV 430 (439)
Q Consensus 402 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
-.++...+.+++++++++++.-..+..|+
T Consensus 526 G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~ 555 (591)
T PTZ00207 526 ERVCVVMPLAFLLGLSFLAFITSTYVHLQY 555 (591)
T ss_pred CceeeHhHHHHHHHHHHHHHHHHhheeeeh
Confidence 12688889999888888888777665544
No 89
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.80 E-value=7.2e-17 Score=162.45 Aligned_cols=306 Identities=13% Similarity=0.059 Sum_probs=178.7
Q ss_pred HHHHHHhhhhhHHHHHHH----hchhH-HHHHHhHHHHHHHHh-hhcch------hhHHHHHHHHhhhHHHHHHhhhhhH
Q 013645 68 LYTSFTCFSLVASLVVRV----LGSKN-ALILGTTGYWLFVAA-NLFPS------WYTMVPASLYLGFAASIIWVGEGTY 135 (439)
Q Consensus 68 ~~~~~~~~~~~~g~l~dr----~G~r~-~l~~g~~~~~~~~~~-~~~~~------~~~li~~r~i~Gig~g~~~~~~~~~ 135 (439)
.....++.+++.|+++|| +|||| .+..+.....+..+. ...++ ...+++.+++.+++.+...+...++
T Consensus 44 ~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 123 (437)
T TIGR00792 44 ARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSL 123 (437)
T ss_pred HHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhC
Confidence 334557888999999998 67755 455666655554433 23332 3345567788888887766666666
Q ss_pred HHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCC--CCCCCcchHHHHHHHHHHHHHHHH-HHh
Q 013645 136 LTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGTTLLFIVFLGVITLGTIL-MCF 212 (439)
Q Consensus 136 i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~--~~~~~w~~~~~~~~~~~~~l~~~~-~~~ 212 (439)
..+... ++++|++..++...+..+|..+++.+...+..... ....+|+.. +.+.+++.++..++ .++
T Consensus 124 ~~~~~~---------~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~-~~i~~~l~~~~~~~~~~~ 193 (437)
T TIGR00792 124 VPAITL---------DPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMF-ALVLALIGVVSLIICFFG 193 (437)
T ss_pred cccccC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHH-HHHHHHHHHHHHHHHHcC
Confidence 666542 56899999998888788887776665544432111 112467763 33444444444333 244
Q ss_pred ccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhccccc-ccchHHHHH
Q 013645 213 LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG-VSGVGGAMA 291 (439)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~ 291 (439)
+||++++.+++. +++.+.++. .++.+++|+++......+.............+ ++.+...+ ....+....
T Consensus 194 ~~e~~~~~~~~~-----~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (437)
T TIGR00792 194 TKERYSEIPKNI-----EKKLSLKQI---FKALFKNDQLLILCLAYLFYNLAFNIKNGVQV-YYFTYVLGDPELFSYMGS 264 (437)
T ss_pred CEecCCCCCccc-----ccCCCHHHH---HHHHhCCHHHHHHHHHHHHHHHHHHHHcchhh-eeEeeecCChHHHHHHHH
Confidence 566432211110 011122332 34567888887765544333322211111111 11111122 234455566
Q ss_pred HHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHH
Q 013645 292 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG 371 (439)
Q Consensus 292 ~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~ 371 (439)
...++.+++.++.+++.||+++|+.+ ..+.++.+++... ..+.++. .....+..++.|++.+..++..+++++
T Consensus 265 ~~~i~~ii~~~~~~~l~~r~g~~~~~-~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~ 337 (437)
T TIGR00792 265 IAIVAGLIGVLLFPRLVKKFGRKILF-AGGILLMVLGYLI--FFFAGSN----LPLILVLIILAGFGQNFVTGLVWALVA 337 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHH-HHHHHHHHHHHHH--HHHcchh----HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67889999999999999999988743 4566555544332 2222221 244556677788988888999999999
Q ss_pred hhccC-------Cc-hhhHHHHHHHHHHHHHHHHHH
Q 013645 372 ILFKH-------DT-EGAFAQLKVWQCASIAVVFFI 399 (439)
Q Consensus 372 ~~~p~-------~~-~~a~s~~~~~~~~g~~i~~~i 399 (439)
|..|. ++ +.++|.+++.+.+|..++..+
T Consensus 338 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i 373 (437)
T TIGR00792 338 DTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFL 373 (437)
T ss_pred hhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 98752 22 335788888887777666444
No 90
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.79 E-value=1.1e-15 Score=143.08 Aligned_cols=341 Identities=13% Similarity=0.078 Sum_probs=225.3
Q ss_pred hhhhhHhhhccCCCCchHHH----HHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhhhcchhhHHHHHHHHh
Q 013645 46 AAQNLETTVNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYL 121 (439)
Q Consensus 46 ~~~~~~~~l~~~~~~g~~~~----~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~~~~~~~~li~~r~i~ 121 (439)
+..++.+++.+|.+++.... ++=..+++..+++++++.+|+|.++.+..+++..++..+.-...+...++....+.
T Consensus 30 svgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt~l~ 109 (395)
T COG2807 30 SVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGTLLA 109 (395)
T ss_pred hhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 33456666777767766543 33455788999999999999999999999998777766654334666677788999
Q ss_pred hhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHH
Q 013645 122 GFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLG 201 (439)
Q Consensus 122 Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~ 201 (439)
|.|.+..-+.-++.+-+. .||+-+..+|+|....+.|..+++.++..+.++. .+||..+.+ .+.
T Consensus 110 G~gIav~nVLLPslIK~~-----------Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~----~gW~~aL~~-WAl 173 (395)
T COG2807 110 GAGIAVINVLLPSLIKRD-----------FPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS----GGWRGALGF-WAL 173 (395)
T ss_pred HhhHHHHHHhhhHHHHhh-----------cccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh----ccHHHHHHH-HHH
Confidence 999988776666666555 5789999999999999999999999988887764 258875433 244
Q ss_pred HHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHH---HHHHhhcchhhhc
Q 013645 202 VITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQ---AFVWAEFTKEIVT 278 (439)
Q Consensus 202 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~---~~~~~~~~~~~~~ 278 (439)
.++++.++ ++|...+++....+ .+. ++-.++++||.-|.+... .|++. ....+|+|+.+.+
T Consensus 174 ~allAl~~--WlPq~~r~~~~~~~---~~~--------~~~~~vw~~~~aW~vtLf---mGlqS~~~Y~~~~WLP~ili~ 237 (395)
T COG2807 174 LALLALLI--WLPQALREQAASIA---TKL--------VSVRKVWRSPLAWQVTLF---MGLQSLLYYIVIGWLPAILID 237 (395)
T ss_pred HHHHHHHH--Hhhhcccccccccc---ccc--------ccccccccCchhHHHHHH---HHhhHHHHHHHHHHHHHHHHH
Confidence 44444433 45553222111000 000 011257899998887643 45543 2346789999888
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhh
Q 013645 279 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 358 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 358 (439)
++++..+.|.+.....+.++..++....+.+|..+++.+.....+.+.++++- +.+.|... .+.. .++.|++
T Consensus 238 ~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G--~~~~P~~~----~~lw--~~llG~G 309 (395)
T COG2807 238 RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVG--LLLAPGQL----PILW--ALLLGLG 309 (395)
T ss_pred cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH--HHHhhhhH----HHHH--HHHHhCc
Confidence 89988889998889999999999999999887655544544444455555432 22434432 2222 5889999
Q ss_pred hhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHH---HHHHHH-----hhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 359 DGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASI---AVVFFI-----GPYISLQAMLIVMVVGICVALVGILFLT 427 (439)
Q Consensus 359 ~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~---~i~~~i-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (439)
.+...+..-+++.+-.++.++ +-..--+.|+.|. +.++.+ +...++......++...++..+.-+...
T Consensus 310 ~G~~F~laL~li~~rs~~a~~-Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 310 QGGAFPLALTLILLRSSDAAI-AAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred cchHHHHHHHHHHhhcCChHH-HHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999988888888765543 2233344444444 334433 3445676666666655555444444433
No 91
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=99.78 E-value=4.2e-18 Score=144.31 Aligned_cols=142 Identities=37% Similarity=0.712 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHhhhhhhHhhh----cc------CCCCchHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHH
Q 013645 33 LSCAFLLIFLAYGAAQNLETTV----NT------EGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (439)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~~l----~~------~~~~g~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~ 102 (439)
|+++++++|++|++.+++++.+ ++ +.+.|..++++.|..++++++++|.+.+++|+|+.+++|.++|+++
T Consensus 1 Lg~~f~~~Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y 80 (156)
T PF05978_consen 1 LGIGFMFLFTAFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIY 80 (156)
T ss_pred CchHHHHHHHHHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4689999999999998887765 22 2578899999999999999999999999999999999999999999
Q ss_pred HHhhhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhc
Q 013645 103 VAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (439)
Q Consensus 103 ~~~~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~ 182 (439)
.++++.++++.++++.++.|+|.+.+|++++.|+++++ ++++|++..|++|...+.+.++|+++...+.+
T Consensus 81 ~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s----------~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 81 IASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS----------TEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC----------CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999987 67899999999999999999999998888765
Q ss_pred CC
Q 013645 183 DD 184 (439)
Q Consensus 183 ~~ 184 (439)
+.
T Consensus 151 ~~ 152 (156)
T PF05978_consen 151 GQ 152 (156)
T ss_pred CC
Confidence 43
No 92
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.78 E-value=2.7e-15 Score=148.83 Aligned_cols=350 Identities=11% Similarity=-0.002 Sum_probs=185.3
Q ss_pred HHHHhhhhhhHhhhccCCCCchHHHHHHH--HHHHhhhhhHHH-----HHHHhchhHHHHHHhHH-HH--HHHHhhh--c
Q 013645 41 FLAYGAAQNLETTVNTEGNLGTISLGILY--TSFTCFSLVASL-----VVRVLGSKNALILGTTG-YW--LFVAANL--F 108 (439)
Q Consensus 41 ~~~~~~~~~~~~~l~~~~~~g~~~~~~~~--~~~~~~~~~~g~-----l~dr~G~r~~l~~g~~~-~~--~~~~~~~--~ 108 (439)
...+....+..|...+|.+.+....+.+. ....+.+++.++ ..||+||||.++++..+ .+ +...... .
T Consensus 14 g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~ 93 (390)
T TIGR02718 14 GIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPD 93 (390)
T ss_pred HhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcc
Confidence 33333344555555555556655555542 222334444444 45668999997666533 22 2222212 1
Q ss_pred ch-hhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCC
Q 013645 109 PS-WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG 187 (439)
Q Consensus 109 ~~-~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~ 187 (439)
.+ ...++..-...++..+...+...++..+.. ++++++...+....+..+|.++|+.....+..+
T Consensus 94 ~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~----------~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~---- 159 (390)
T TIGR02718 94 VAGAGWAVGLLACASLASATQDIATDGMAAEHF----------NGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK---- 159 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 12 222222333344444444444444433332 455667667777776677777777666666543
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHH
Q 013645 188 STSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAF 267 (439)
Q Consensus 188 ~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ 267 (439)
.+||.. |++.+++.++..+..++++|++++++++ ++. ..++.++.+|+|+++......+........
T Consensus 160 -~gw~~~-f~~~a~l~~~~~~~~~~~~~~~~~~~~~-------~~~----~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~ 226 (390)
T TIGR02718 160 -FGQRPA-FLLVACVPLASLVCVLWLKDRAVASPEA-------PLA----RRASLFRFFRRPLAWSLLALALLSAMTAVS 226 (390)
T ss_pred -hCHHHH-HHHHHHHHHHHHHHHHHcCCCCcCcccc-------chh----hHHHHHHHHcCcCHHHHHHHHHHHHHHHHH
Confidence 358774 5555555555444445555433211110 000 112345678888877655544433332222
Q ss_pred HHhhcchhhhcccccccchHHHHHHHHH-HHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHh-hc-cCCCCccc
Q 013645 268 VWAEFTKEIVTPALGVSGVGGAMAVYGA-FDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NY-SVTSGVLG 344 (439)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~g~~~~~~~i-~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~-~~-~~~~~~~~ 344 (439)
..+..+.++.+.+++.+++|.+....++ ..+++.++.|++.||+++|+.+ ..+.++.++....... .. .....
T Consensus 227 ~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~--- 302 (390)
T TIGR02718 227 GFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTF-ILGVGLAGSLALLWFAQAAFWLAPG--- 302 (390)
T ss_pred HHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHHHHHHHHHHHHHcccCCc---
Confidence 2334444444456777788887776664 5567788999999999987644 3444433221111111 11 00111
Q ss_pred hHHHHHHHHHHhhhhhhhhhhHHHHHHhhccC-C-chhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHH
Q 013645 345 TLYPLIMAALLGIGDGVLNTQLSALLGILFKH-D-TEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICV 418 (439)
Q Consensus 345 ~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~-~-~~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~~~~ 418 (439)
....+....+.+++.+...+..++...+..++ + +++.++.++...++|..+++.+.+. .++...+...+++.++
T Consensus 303 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~ 382 (390)
T TIGR02718 303 IAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVL 382 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 12333444555666777777778887777755 3 3557788888888888877766543 3455555555554444
Q ss_pred HHH
Q 013645 419 ALV 421 (439)
Q Consensus 419 ~~~ 421 (439)
+.+
T Consensus 383 a~~ 385 (390)
T TIGR02718 383 AIL 385 (390)
T ss_pred HHH
Confidence 433
No 93
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.77 E-value=1.9e-17 Score=173.15 Aligned_cols=254 Identities=16% Similarity=0.072 Sum_probs=161.4
Q ss_pred hHhhhccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhhhcc----------------
Q 013645 50 LETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFP---------------- 109 (439)
Q Consensus 50 ~~~~l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~~~~---------------- 109 (439)
..+++.++.++... ..+....++++++++.+++.||+|||+.+.+|.+++++..+.+..+
T Consensus 55 ~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~ 134 (633)
T TIGR00805 55 SLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSST 134 (633)
T ss_pred hchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccc
Confidence 34455554444332 2455666778889999999999999999999998877765443211
Q ss_pred ------------------------------------hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCccc
Q 013645 110 ------------------------------------SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGT 153 (439)
Q Consensus 110 ------------------------------------~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~ 153 (439)
.+..++++|+++|+|.+..++...+++.|+. |++
T Consensus 135 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~----------~~~ 204 (633)
T TIGR00805 135 GNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFA----------KSK 204 (633)
T ss_pred ccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccC----------Ccc
Confidence 2456778999999999999999999999987 889
Q ss_pred chhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCC-------------CCCC----cchHHHHHHHHHHHHHHHHHHhccCC
Q 013645 154 VIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG-------------GSTS----GTTLLFIVFLGVITLGTILMCFLRKE 216 (439)
Q Consensus 154 ~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~-------------~~~~----w~~~~~~~~~~~~~l~~~~~~~l~~~ 216 (439)
+|++++|++.+...+|+++|+++++.+.....+ .... ||. .|++.+++.++..+..+++|++
T Consensus 205 ~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl-~Fli~g~l~~l~~v~l~~~p~~ 283 (633)
T TIGR00805 205 NSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWI-GFLICGGVALLTSIPFFFFPKA 283 (633)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHH-HHHHHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999998887643210 0011 332 3444444444443344555542
Q ss_pred Cccc----ccccccc------chhh----hhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccc
Q 013645 217 EDKG----EKETADA------SVNF----YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PAL 281 (439)
Q Consensus 217 ~~~~----~~~~~~~------~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~ 281 (439)
.+++ +.+..+. +.+. ....++..+..+++++||.++......+...........++|+++.+ .++
T Consensus 284 lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~ 363 (633)
T TIGR00805 284 LPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGI 363 (633)
T ss_pred cCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2111 0000000 0000 01122333456778899998876655433322222222455555432 356
Q ss_pred cccchHHHHHHHHH-HHHHHHHhhhhhhcCCCCc
Q 013645 282 GVSGVGGAMAVYGA-FDAICSLAAGRLTTGLPSI 314 (439)
Q Consensus 282 ~~~~~g~~~~~~~i-~~~ig~~~~G~l~d~~~~r 314 (439)
+.++.+.+.....+ +.++|.++.|++.||++.+
T Consensus 364 s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 364 SSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred cHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 66677777766665 5678999999999998743
No 94
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.77 E-value=6.5e-15 Score=150.59 Aligned_cols=391 Identities=10% Similarity=0.092 Sum_probs=208.6
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhh-HhhhccCCCCchHHHHHHH----HHHHhhhhhHHHHHHH-hchhHHHHHHhHHHH
Q 013645 27 TRDVHILSCAFLLIFLAYGAAQNL-ETTVNTEGNLGTISLGILY----TSFTCFSLVASLVVRV-LGSKNALILGTTGYW 100 (439)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~~-~~~l~~~~~~g~~~~~~~~----~~~~~~~~~~g~l~dr-~G~r~~l~~g~~~~~ 100 (439)
.+.++.+....++.-.+++..... ...+.++.+.........+ .......+++|+++|| +|||+++..+.++++
T Consensus 20 p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ 99 (500)
T PRK09584 20 PKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLA 99 (500)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 345555555555555555544433 3333343344332222222 2223344689999999 599999999998877
Q ss_pred HHHHhh-hc-chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHH
Q 013645 101 LFVAAN-LF-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (439)
Q Consensus 101 ~~~~~~-~~-~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~ 178 (439)
+..... .. +++..+++.|++.|+|.|...+...+++++..++ ++++|+.+++++..+.++|..+||.+++
T Consensus 100 ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~--------~~~~~~~~~~~~~~~~~iG~~~gp~i~g 171 (500)
T PRK09584 100 IGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEK--------DDPRLDGAFTMYYMSINIGSFFSMLATP 171 (500)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCC--------CchhhhhcchHHHHHHHHHHHHHHHHHH
Confidence 654433 33 3455666789999999998888888888888621 1234566889889999999999999998
Q ss_pred HhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHH----hccCCCcccccc-ccccchh-----------------hhhhHH
Q 013645 179 AVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC----FLRKEEDKGEKE-TADASVN-----------------FYSYLV 236 (439)
Q Consensus 179 ~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~----~l~~~~~~~~~~-~~~~~~~-----------------~~~~~~ 236 (439)
.+..+ .+||+.++ +..+...++.+..+ .+++..++++.+ .+..+.. .+.+..
T Consensus 172 ~l~~~-----~g~~~~F~-i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (500)
T PRK09584 172 WLAAK-----YGWSVAFA-LSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIA 245 (500)
T ss_pred HHHHh-----hCHHHHHH-HHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHH
Confidence 88653 35887543 33433334433322 233321111100 0000000 000000
Q ss_pred H------------H-HHHHHH--hhccchhHHHHHHHHHhhHHHHHHHhhcchhhh-------ccc-cccc-chHHHHHH
Q 013645 237 S------------L-SKSITT--LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-------TPA-LGVS-GVGGAMAV 292 (439)
Q Consensus 237 ~------------~-~~~~~~--~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~-------~~~-~~~~-~~g~~~~~ 292 (439)
. . .++..+ ...++|.+...+.+ .............+..+. ++. .+.+ ..+.+..+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~ 324 (500)
T PRK09584 246 RMALGVVALGIVVIFGKEAFAMKGAARRKMIVAFILM-LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQAL 324 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHH
Confidence 0 0 000000 01122332222221 111110000111111111 001 1221 23445556
Q ss_pred HHHHHHHHHHhh----hhhhcCCCCcceehhhHHHHHHHHHHHHHhh--ccCCCCccchHHHHHHHHHHhhhhhhhhhhH
Q 013645 293 YGAFDAICSLAA----GRLTTGLPSITFIVSGGAIAQVVVFLWILIN--YSVTSGVLGTLYPLIMAALLGIGDGVLNTQL 366 (439)
Q Consensus 293 ~~i~~~ig~~~~----G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~ 366 (439)
.++..++...+. +++.||.+.++ .+.+|.++.++++..+... ..++....+..+.....++.|+++....|..
T Consensus 325 n~i~iil~~p~~~~~~~~l~~r~~~~~-~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g 403 (500)
T PRK09584 325 NPFWIMIGSPILAAIYNKMGDRLPMPH-KFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLG 403 (500)
T ss_pred hHHHHHHHHHHHHHHHHHhCcCCCcHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHH
Confidence 666666665555 56666655333 3456777777665432111 1111111223467788999999999999999
Q ss_pred HHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHh-----hh---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013645 367 SALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIG-----PY---------ISLQAMLIVMVVGICVALVGILFLTIQVE 431 (439)
Q Consensus 367 ~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~-----~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
.+++.+..|++.+ .+.|.+.+....|..++-.+. +. ..+...+..+++..++.++..+.+.++.+
T Consensus 404 ~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~ 483 (500)
T PRK09584 404 LAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLN 483 (500)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998865 477877776666665543222 11 12456666666666655555566666665
Q ss_pred hh
Q 013645 432 KA 433 (439)
Q Consensus 432 ~~ 433 (439)
|.
T Consensus 484 k~ 485 (500)
T PRK09584 484 RM 485 (500)
T ss_pred HH
Confidence 54
No 95
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.75 E-value=5.8e-16 Score=159.14 Aligned_cols=140 Identities=19% Similarity=0.193 Sum_probs=108.4
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhh
Q 013645 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (439)
Q Consensus 64 ~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~ 142 (439)
..++.+...+++++++|+++|++|||+.+.++.+.+.+..+. ..++|+..++++|++.|+|.|......+.|++|.+
T Consensus 94 ~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEia-- 171 (513)
T KOG0254|consen 94 LTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIA-- 171 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcC--
Confidence 456666777889999999999999999999999998886655 56789999999999999999999999999999998
Q ss_pred hhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCc
Q 013645 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (439)
Q Consensus 143 ~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~ 218 (439)
|++.||...+.+.....+|..+|..++...... . .+||.. +.+..+.+++..+..+++||.++
T Consensus 172 --------p~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~-~---~~Wr~~-~~~~~i~~~~~~~~~~~~pesp~ 234 (513)
T KOG0254|consen 172 --------PAHIRGTLVSLYQLFITIGILLGYCINYGTSKV-Y---AGWRIP-LGLALIPAVILALGMLFLPESPR 234 (513)
T ss_pred --------ChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC-C---ccHHHH-HHHHHHHHHHHHHHHHhCCCChH
Confidence 889999999999888888888885555544221 0 368863 33333334333333567787543
No 96
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.75 E-value=1.8e-16 Score=148.56 Aligned_cols=312 Identities=13% Similarity=0.045 Sum_probs=183.9
Q ss_pred HHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhh
Q 013645 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (439)
Q Consensus 66 ~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a 144 (439)
+.+...-.++++..|.++||+|||.++..|.++..++-.. ....|+..++.+|++.|+..|.+-+. -++++|+.
T Consensus 75 SsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~-rAiisdV~---- 149 (451)
T KOG2615|consen 75 SSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVI-RAIISDVV---- 149 (451)
T ss_pred hHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHH-HHHHHhhc----
Confidence 3444455677788999999999999999999887775443 45678877777799999999887555 67888887
Q ss_pred hhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCC-CCCCCCcchHHHHHHHHHHH---H-HHHHHHhccCCCcc
Q 013645 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD-KGGSTSGTTLLFIVFLGVIT---L-GTILMCFLRKEEDK 219 (439)
Q Consensus 145 ~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~-~~~~~~w~~~~~~~~~~~~~---l-~~~~~~~l~~~~~~ 219 (439)
+||+|++.++.....+++|.++||.+|+++.+.. ..+ +..++..-.+..+ . -....+++||+-+.
T Consensus 150 ------sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g----~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~ 219 (451)
T KOG2615|consen 150 ------SEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG----SYPFALPCLLVFILAAGDVTFFPWFLPETLPL 219 (451)
T ss_pred ------ChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc----cCchHHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 7899999999999999999999999999987622 111 1111211111111 1 12234788986543
Q ss_pred cccc--cccc-ch--hhh--hhHHHHHHHHHHhhccchhHHHHHHHHHhhHHH---HHHHh---hcchhhhcc--ccccc
Q 013645 220 GEKE--TADA-SV--NFY--SYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQ---AFVWA---EFTKEIVTP--ALGVS 284 (439)
Q Consensus 220 ~~~~--~~~~-~~--~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~---~~~~~---~~~~~~~~~--~~~~~ 284 (439)
+++. ..+. +. ... .++... .-...++|+...-..-.....++-. .+..+ .+...+... ++++.
T Consensus 220 rk~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~ 297 (451)
T KOG2615|consen 220 RKRNDEHSTLQEAADDRLALLKFARI--FKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSM 297 (451)
T ss_pred hhhcccccchhhhhhhhhhhcchhhh--hhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChh
Confidence 2211 1100 00 000 001100 0112334444322111111111111 11111 111122122 33445
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhcCCC-CcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhh
Q 013645 285 GVGGAMAVYGAFDAICSLAAGRLTTGLP-SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 363 (439)
Q Consensus 285 ~~g~~~~~~~i~~~ig~~~~G~l~d~~~-~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 363 (439)
+.|.+....|+...+.+....+..||.+ ..+..+..+..++.-.+. +..+.+++ ..++....+..+..+...
T Consensus 298 ~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~l--lls~~~~~-----~~l~~~s~l~sf~~A~~v 370 (451)
T KOG2615|consen 298 QQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFL--LLSLARTP-----VVLYLGSTLKSFSTASVV 370 (451)
T ss_pred hheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHH--HHhccccc-----hhhhHHHHHHHHHHHHhh
Confidence 6777666666666655555555555543 111122233322222221 34555442 567889999999999999
Q ss_pred hhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh
Q 013645 364 TQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP 401 (439)
Q Consensus 364 ~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~ 401 (439)
|.+..++.+..|++++ .+.|+.+-..+++=++||.+++
T Consensus 371 t~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g 409 (451)
T KOG2615|consen 371 TCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSG 409 (451)
T ss_pred HHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhh
Confidence 9999999999988764 5678888888888888888774
No 97
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.71 E-value=1.7e-13 Score=138.11 Aligned_cols=361 Identities=14% Similarity=0.092 Sum_probs=205.3
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHH-HHHHhh--hcc-hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHh
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW-LFVAAN--LFP-SWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~-~~~~~~--~~~-~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~ 140 (439)
.++-...-++..++.|.++|+-|+||.++......+ +.++.. ..+ ++....+.-++.-++.+...+..++++.+.+
T Consensus 76 ~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la 155 (477)
T PF11700_consen 76 NSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLA 155 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc
Confidence 334444556777889999999998887766555433 333332 223 4444334444555555555666778888887
Q ss_pred hhhhhhcCC----------------CcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCC---CCCcchHHHHHHHH
Q 013645 141 LSHASNHKL----------------HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG---STSGTTLLFIVFLG 201 (439)
Q Consensus 141 ~~~a~~~~~----------------~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~---~~~w~~~~~~~~~~ 201 (439)
+...+..+. ..+.+|++..|.-++...+|..+.-.+...+....+.. ..+-|.. +.+.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~-~~~~a~ 234 (477)
T PF11700_consen 156 RPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVA-FLIVAL 234 (477)
T ss_pred CCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHH-HHHHHH
Confidence 322110000 00001289888888888888877776666554432211 1112332 211122
Q ss_pred HH-HHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHH--HhhHHHHHH-Hhhcchhhh
Q 013645 202 VI-TLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFA--YSGLQQAFV-WAEFTKEIV 277 (439)
Q Consensus 202 ~~-~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~g~~~~~~-~~~~~~~~~ 277 (439)
-- +.+.+.++++|++++.+..+. .+......+++..+..++..|+|.........+ .-|+..... ...|...
T Consensus 235 ww~vfsiP~~~~~~~~~~~~~~~~--~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~-- 310 (477)
T PF11700_consen 235 WWLVFSIPLFLWLPDRPGPRPLPS--GSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATE-- 310 (477)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCc--chhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 11 233334566777544111110 000112233443344444555666554433322 223433221 1233321
Q ss_pred cccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCc--ceehhhHHHHH-HHHHHHHHhhccCCC-CccchHHHHHHHH
Q 013645 278 TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSI--TFIVSGGAIAQ-VVVFLWILINYSVTS-GVLGTLYPLIMAA 353 (439)
Q Consensus 278 ~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r--~~~~~~g~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 353 (439)
+-+++.++...+..+..+..++|++++|++.||+|.| +. +..+.+.. .++.. .++.+.++. ..-+.+..++..+
T Consensus 311 ~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~-l~~~l~~~~~i~~~-g~~G~~~~~~g~~~~~~f~~~a~ 388 (477)
T PF11700_consen 311 VLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRT-LLISLILWIIIPLY-GLFGFWPSFFGLKSPWEFWVLAV 388 (477)
T ss_pred hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH-HHHHHHHHHHHHHH-HHHHhhhcccCcccHHHHHHHHH
Confidence 1245555666667788999999999999999999977 43 33433333 22221 122111110 0001256788899
Q ss_pred HHhhhhhhhhhhHHHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 354 LLGIGDGVLNTQLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIGP-----YISLQAMLIVMVVGICVALVGILFLT 427 (439)
Q Consensus 354 l~G~~~~~~~~~~~a~~~~~~p~~~~~-a~s~~~~~~~~g~~i~~~i~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (439)
++|+..+..++..-++.+++.|++++. -||+|.+..-..+.+|+++-+ ..+.+..+..+.++++++.+.+.+++
T Consensus 389 ~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 389 LIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999998864 589998888777777775543 34678888999999999999887666
Q ss_pred HHHhh
Q 013645 428 IQVEK 432 (439)
Q Consensus 428 ~~~~~ 432 (439)
.+..|
T Consensus 469 ~~~g~ 473 (477)
T PF11700_consen 469 VEKGR 473 (477)
T ss_pred chhhh
Confidence 55433
No 98
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.70 E-value=9.6e-15 Score=150.57 Aligned_cols=315 Identities=11% Similarity=0.031 Sum_probs=184.7
Q ss_pred CCchHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHH
Q 013645 59 NLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLT 137 (439)
Q Consensus 59 ~~g~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~ 137 (439)
.......++++.+..+|+++.|+++||+|||+++..+.++..++... .+++|++.+++.|++.|++.+...+....+++
T Consensus 118 ~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~ 197 (521)
T KOG0255|consen 118 TLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVA 197 (521)
T ss_pred hHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhhe
Confidence 33445678889999999999999999999999999999998887665 47899999999999999999999999999998
Q ss_pred HHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCC
Q 013645 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 217 (439)
Q Consensus 138 ~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~ 217 (439)
|+. ++++|+.+..+ ....-.++.++++.++++.. +||+..++ ..+...+.++..++.+|.+
T Consensus 198 E~~----------~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-------~Wr~~~~~-~~~~~~~~~~~~~l~~Es~ 258 (521)
T KOG0255|consen 198 EIV----------SPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-------DWRWLFWI-ISIPSGLFLLLWFLPPESP 258 (521)
T ss_pred eec----------CcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-------hHHHHHHH-HHHHHHHHHHHHHccCcCh
Confidence 887 88999999998 66777888888887777764 49885443 3444444444434444643
Q ss_pred cc----cc-ccccc--cc--------hhhhhhHHHH-----H--------HHHHHhhccchhHHHHHHHHHhhHHHHHHH
Q 013645 218 DK----GE-KETAD--AS--------VNFYSYLVSL-----S--------KSITTLLADVRMLLIIPLFAYSGLQQAFVW 269 (439)
Q Consensus 218 ~~----~~-~~~~~--~~--------~~~~~~~~~~-----~--------~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~ 269 (439)
+- ++ ++..+ ++ .......... . ......++.|++.......++..+....
T Consensus 259 rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~-- 336 (521)
T KOG0255|consen 259 RWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSL-- 336 (521)
T ss_pred HHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhH--
Confidence 31 11 11000 00 0000000000 0 0123344444333322222222211111
Q ss_pred hhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHH
Q 013645 270 AEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPL 349 (439)
Q Consensus 270 ~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (439)
.++...+...+++. .........+..+..+....+...|+.|||... ..+..+..++.+ ...+.++... ..+..
T Consensus 337 ~y~gl~~~~~~lg~-~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~-~~~~~~~~~~~~--~~~~~~~~~~--~~~~~ 410 (521)
T KOG0255|consen 337 VYYGLSLNVSGLGG-NIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPL-FLSLFLAGIGLL--LFGWLPDDLG--GWLHW 410 (521)
T ss_pred HHHhhhhhhhhcCc-hHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHH-HHHHHHHHHHHH--HHHHhhccch--hHHHH
Confidence 11111111112222 222333445556677777778889999887644 344444444432 2234333210 01222
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHh
Q 013645 350 IMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIG 400 (439)
Q Consensus 350 ~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~ 400 (439)
+...+-.++.+......+.+..+++|+..+ .+.+.......+|..+++.+.
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~ 462 (521)
T KOG0255|consen 411 ILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFP 462 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222233333344458899999999865 366777677677777766554
No 99
>PRK09669 putative symporter YagG; Provisional
Probab=99.70 E-value=2.4e-14 Score=144.63 Aligned_cols=300 Identities=9% Similarity=-0.052 Sum_probs=167.4
Q ss_pred HHHhhhhhHHHHHHH----hchhHHH-HHHhHHHHHHHHh-hhcch------hhHHHHHHHHhhhHHHHHHhhhhhHHHH
Q 013645 71 SFTCFSLVASLVVRV----LGSKNAL-ILGTTGYWLFVAA-NLFPS------WYTMVPASLYLGFAASIIWVGEGTYLTA 138 (439)
Q Consensus 71 ~~~~~~~~~g~l~dr----~G~r~~l-~~g~~~~~~~~~~-~~~~~------~~~li~~r~i~Gig~g~~~~~~~~~i~~ 138 (439)
..++..++.|.++|| +||||.+ +.+....++.... +..|+ ...+++..++.+.+.+...+...++.+|
T Consensus 57 ~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~ 136 (444)
T PRK09669 57 LDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGA 136 (444)
T ss_pred HHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHH
Confidence 456788999999999 7776554 4565555444332 33332 2334445566676666666666677777
Q ss_pred HhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCC--CCCCCcchHHHHHHHHHHHHHHHHH-HhccC
Q 013645 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGTTLLFIVFLGVITLGTILM-CFLRK 215 (439)
Q Consensus 139 ~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~--~~~~~w~~~~~~~~~~~~~l~~~~~-~~l~~ 215 (439)
... ++++|++..++-..+.++|..+++.+...+..... +...+|+. .+++++++.++..+.. +..||
T Consensus 137 ~t~---------~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~-~~~i~~ii~~v~~~~~~~~~~e 206 (444)
T PRK09669 137 ITN---------DPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFY-AMMVMGLLGVVLFFCCFFMTKE 206 (444)
T ss_pred hcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH-HHHHHHHHHHHHHHHHhCCeEE
Confidence 652 56889998888888888888887765544432211 11234654 2334444444433333 23344
Q ss_pred CCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhccccccc-chHHHHHHHH
Q 013645 216 EEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS-GVGGAMAVYG 294 (439)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~ 294 (439)
++++++ + ++.+.+ ++.++.+|||.++.+....+..........+ +..++.+..++.. ..+.+.....
T Consensus 207 ~~~~~~-~-------~~~~~~---~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~ 274 (444)
T PRK09669 207 RYTPEV-D-------NSSSVW---KDLKLLLGNSQWRIMFIFNVVLLTAVVTRGG-ATLYYVNYVLLRPDLATLFLVTGM 274 (444)
T ss_pred ecCCCC-c-------CCCCHH---HHHHHHhCCchHHHHHHHHHHHHHHHHHHhh-hhheeeeeecCCHHHHHHHHHHHH
Confidence 322111 1 011122 2345677899887765543332222211111 1111111112222 2333444556
Q ss_pred HHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhc
Q 013645 295 AFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILF 374 (439)
Q Consensus 295 i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~ 374 (439)
+..+++.++++++.||+++|+.. ..+.+...++... ....+++ + ....++..+++|++.+...+..+++++|..
T Consensus 275 i~~ii~~~~~~~l~~r~gk~~~~-~~~~~~~~~~~~~-~~~~~~~-~---~~~~~~~~~i~g~~~~~~~~~~~am~ad~~ 348 (444)
T PRK09669 275 IAGLFGALLSERLLGKFDRVRAF-KWTIVAFVILSAL-IFFIPPS-N---VWLIFALNILFNFIQNLTTPLQWSMFSDVV 348 (444)
T ss_pred HHHHHHHHHHHHHHHHhChHHHH-HHHHHHHHHHHHH-HHHhCcc-h---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 77788888999999999987644 3444443322211 1122222 2 245566778899999999999999999998
Q ss_pred cCCc-------hh-hHHHHHHHHHHHHHHHHH
Q 013645 375 KHDT-------EG-AFAQLKVWQCASIAVVFF 398 (439)
Q Consensus 375 p~~~-------~~-a~s~~~~~~~~g~~i~~~ 398 (439)
+.++ +. .+|.+++.+.+|.+++..
T Consensus 349 d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~ 380 (444)
T PRK09669 349 DYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGA 380 (444)
T ss_pred hhhhhhcCcCcchHHHHHHHHHHHHHHHHHHH
Confidence 6321 12 357776666666665543
No 100
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.70 E-value=2.3e-14 Score=145.97 Aligned_cols=308 Identities=11% Similarity=0.070 Sum_probs=174.9
Q ss_pred HHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhh
Q 013645 67 ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (439)
Q Consensus 67 ~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~ 145 (439)
......++.+++.|+++|.+|||+.++.+.+++.+..+. ..++|...++..-++.|+|.|..... ...++|..
T Consensus 86 ~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~~-~~~isEl~----- 159 (599)
T PF06609_consen 86 AWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQELA-ALAISELV----- 159 (599)
T ss_pred HHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHHH-HHHHHHhc-----
Confidence 344466788899999999999999999999988886654 56899999999999999998877654 33467776
Q ss_pred hcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHH-HHhccCCCcc---cc
Q 013645 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDK---GE 221 (439)
Q Consensus 146 ~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~~~---~~ 221 (439)
|.|.|+...++.....-....+|+.++..+..+ .+||+.+| +..+...+++++ .+|.++|++. .+
T Consensus 160 -----p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~-----~~WRw~~~-~~~i~~~i~~vl~~~fY~PP~~~~~~~~ 228 (599)
T PF06609_consen 160 -----PNKWRGLGLAIASIPFIITTWISPLIAQLFAAH-----SGWRWIFY-IFIIWSGIALVLIFFFYFPPPRAQLHGR 228 (599)
T ss_pred -----ccchhhhHhHHHHHHHHhhhcccHHHHHHhccC-----CCcchHHH-HHHHHHHHHHHHHHHHhCCCchhhhccc
Confidence 777887766654443333333455655544332 36998644 445555555443 3444443321 11
Q ss_pred c----c-ccc------------------------------cchhhhhh------------HHHHH------HHHHHhhcc
Q 013645 222 K----E-TAD------------------------------ASVNFYSY------------LVSLS------KSITTLLAD 248 (439)
Q Consensus 222 ~----~-~~~------------------------------~~~~~~~~------------~~~~~------~~~~~~~~~ 248 (439)
+ | -.+ .+.+.-.+ ..|.+ .-..+++||
T Consensus 229 ~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~ 308 (599)
T PF06609_consen 229 KLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKD 308 (599)
T ss_pred cCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhcc
Confidence 0 1 000 00000000 00100 012356777
Q ss_pred chhHHH-HHHHHHhhHHHHHHHhhcchhhh---c-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHH
Q 013645 249 VRMLLI-IPLFAYSGLQQAFVWAEFTKEIV---T-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAI 323 (439)
Q Consensus 249 ~~~~~l-~~~~~~~g~~~~~~~~~~~~~~~---~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~ 323 (439)
+|.+.. ....+..|.........+|+... . +..+....+.....++++..+|.++.|.+..|+++-|..++++.+
T Consensus 309 ~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~ 388 (599)
T PF06609_consen 309 RRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSV 388 (599)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHH
Confidence 664333 23333444332112234444321 1 112223466777778889999999999988877755545556666
Q ss_pred HHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHH
Q 013645 324 AQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVV 396 (439)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~ 396 (439)
...+.... +....+++. ...+...++-|++.+...........-..|++. +.+.|+.-..+.+|.+++
T Consensus 389 ~~ta~~Ga-ma~~~~~n~----~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg 457 (599)
T PF06609_consen 389 LMTAFCGA-MAAVRPDNK----NAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIG 457 (599)
T ss_pred HHHHHHHH-HHHccCCCc----chHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHH
Confidence 55443221 223333332 223455556666666666555555555667654 456666666666655554
No 101
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.68 E-value=3.6e-13 Score=133.25 Aligned_cols=343 Identities=16% Similarity=0.069 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHHHhhhhhhHhhhccCCCCchHHHHHHHHHH----HhhhhhHHHHHHHhc-hhHHHHHHhHHHHHHHHh-
Q 013645 32 ILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSF----TCFSLVASLVVRVLG-SKNALILGTTGYWLFVAA- 105 (439)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~----~~~~~~~g~l~dr~G-~r~~l~~g~~~~~~~~~~- 105 (439)
.++.-+++.+..+....+..+...++.+.+....+++++.. .+++++.|.++||.+ +|+.+.+..+.-++....
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 44455555666666555555554544445544445554433 456678899999986 677777766654443322
Q ss_pred hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHH-HHHhhcCC
Q 013645 106 NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI-TLAVLKDD 184 (439)
Q Consensus 106 ~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i-~~~l~~~~ 184 (439)
...++++.+++.-++..+...+..+...++..+.. +++++..|-.-...++|-+++... ...+....
T Consensus 86 ~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~------------~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~ 153 (400)
T PF03825_consen 86 AFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYL------------GDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYL 153 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHc------------ccccCCCCcchhhhhHHHHHHHHHHHHHHHhhh
Confidence 23456665555566666666555555555544443 123333443444445665555432 22222211
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHH
Q 013645 185 KGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQ 264 (439)
Q Consensus 185 ~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 264 (439)
+.+ +... .+.+..++.++.....+.+|+.+++++++.+ .+ + ...++..+++|||++.......+..+..
T Consensus 154 ~~~--~~~~-~~~i~~~~~~ll~~~~l~lp~~~~~~~~~~~----~~-~---~~~~~~~~llk~~~~~~Fll~~~l~~~~ 222 (400)
T PF03825_consen 154 GIS--GTSL-IFYIAAILSLLLAGFALFLPKTPPKRSAKES----VK-K---LLGLDALKLLKNPRFLVFLLAAFLIGIS 222 (400)
T ss_pred ccc--cccH-HHHHHHHHHHHHHHHHHhCCCCccccccCCC----cc-c---ccchHHHHHhcCccHHHHHHHHHHHHHH
Confidence 100 1112 2233333333333334556664322111100 00 0 1112345788999988766655666665
Q ss_pred HHHHHhhcchhhhccc-ccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCcc
Q 013645 265 QAFVWAEFTKEIVTPA-LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVL 343 (439)
Q Consensus 265 ~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 343 (439)
.+.+++..+.++.+.+ ...+..+....+-.+++++.-+..+++.+|++.++ ++.++.+..++=+. ++.+.+++.+.
T Consensus 223 ~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~-ll~~a~~~~~vR~~--l~a~~~~~~~~ 299 (400)
T PF03825_consen 223 HAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW-LLLLALVAYAVRWL--LYAYFSDPWPF 299 (400)
T ss_pred HHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHH--HHHHhcCCcHH
Confidence 5554444444443333 33445676666777888888888999999999776 44566666665443 23343233210
Q ss_pred chHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHH-HHHHHHHHHHh
Q 013645 344 GTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQ-CASIAVVFFIG 400 (439)
Q Consensus 344 ~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~-~~g~~i~~~i~ 400 (439)
......+...+.|+..+........++.+..|++.+ ++.+++.... .+|..++-.++
T Consensus 300 ~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ig 358 (400)
T PF03825_consen 300 IVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIG 358 (400)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHH
Confidence 001122334679999999999999999999998864 5667665543 45555554443
No 102
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.66 E-value=5.2e-14 Score=135.05 Aligned_cols=261 Identities=13% Similarity=0.080 Sum_probs=166.1
Q ss_pred chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCC-
Q 013645 109 PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG- 187 (439)
Q Consensus 109 ~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~- 187 (439)
.++..++++-++.|.|.+...++.+.|+++.. ++|++.+.+++.++++++|..+||.++..+......+
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~----------~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~ 77 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILG----------PIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDL 77 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHC----------CcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcch
Confidence 56778888999999999999999999999997 7788999999999999999999999988776422100
Q ss_pred ----------CCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHH-
Q 013645 188 ----------STSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIP- 256 (439)
Q Consensus 188 ----------~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 256 (439)
..+|+. .|.+.+++..+..+...+.+.|+.+++++ ++.+..++ .+ ..+.+++|++++...
T Consensus 78 ~~~~~~~~~~~~~~~~-~yl~ia~~~~~~~i~~~~~~~p~~~~~~~-~~~~~~~~----~~---~~~~~~~~~~~l~~~~ 148 (310)
T TIGR01272 78 SMQVATANAEAAKVHT-PYLLLAGALAVLAIIFAFLPLPELQEADV-ARVSSGDT----TQ---KTSAFQFTHLVLGALG 148 (310)
T ss_pred hhhhhhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHccCCCCCcccc-cccccccc----cc---hhhHHhhHHHHHHHHH
Confidence 124655 34434443333333334444333221111 00000000 00 113456677666443
Q ss_pred HHHHhhHHHHHHHhhcchhhhc---ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHH
Q 013645 257 LFAYSGLQQAFVWAEFTKEIVT---PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL 333 (439)
Q Consensus 257 ~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~ 333 (439)
.+++.|.+.+.. ++++.++.+ .+++.++.+.....+..+.++|+++.+++.||+++|+. +..+.++..++.. +
T Consensus 149 ~f~yvg~e~~~~-~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~-l~~~~~l~~~~~~--l 224 (310)
T TIGR01272 149 IFVYVGAEVSAG-SFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRY-LAFNAFLAVLLSI--G 224 (310)
T ss_pred HHHHHHHHHHHH-HHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH-HHHHHHHHHHHHH--H
Confidence 455677766543 345544432 24556677888889999999999999999999997764 3455555444332 1
Q ss_pred hhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHH
Q 013645 334 INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFI 399 (439)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i 399 (439)
....+. .......++.|++.+...|...+...+..|++.+.+.++..+ ..+|.++.+.+
T Consensus 225 ~~~~~~------~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~~~-~~~Gg~i~P~l 283 (310)
T TIGR01272 225 AALTHG------YVAMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGILCL-AIVGGAIVPLL 283 (310)
T ss_pred HHHcCC------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH-HHhcchHHHHH
Confidence 222222 122345567899999999999999999888876656555433 34555666543
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.66 E-value=3.1e-13 Score=137.09 Aligned_cols=336 Identities=13% Similarity=0.062 Sum_probs=196.5
Q ss_pred hhHhhhccCCCCchHHH----HHHHHHHHhhhhhHHHHHHHhc-----hhHHHHHHhHHHH-HHHHh-hhcchhh-HHHH
Q 013645 49 NLETTVNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLG-----SKNALILGTTGYW-LFVAA-NLFPSWY-TMVP 116 (439)
Q Consensus 49 ~~~~~l~~~~~~g~~~~----~~~~~~~~~~~~~~g~l~dr~G-----~r~~l~~g~~~~~-~~~~~-~~~~~~~-~li~ 116 (439)
.+.+.+.++.+...... +.....+.+ .++.|+++||++ ||+.++++.+..+ +.... ...++.. ...+
T Consensus 47 ~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~ 125 (468)
T TIGR00788 47 PLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAA 125 (468)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 44444454445554433 334444444 456999999998 7777777776543 22111 1224433 3334
Q ss_pred HHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHH
Q 013645 117 ASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLF 196 (439)
Q Consensus 117 ~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~ 196 (439)
..++.+++.+...++..++..|..++ +++.++...++.|...+.|.++|+.+++.+... .+|+.. |
T Consensus 126 ~~~l~~~~~a~~dv~~da~~~e~~~~--------~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~-----~~~~~~-f 191 (468)
T TIGR00788 126 FIFLAALAKALYDVLVDSLYSERIRE--------SPSAGPSLVSWMWGASATGGLISSLLGGPLLDK-----TLTRIL-F 191 (468)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhhhc--------CCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh-----cCcchH-H
Confidence 78899999999999999999888731 233344455666776778999999998887653 258775 4
Q ss_pred HHHHHHHHHHHHHHHhccCCCc--cccc-ccc-----ccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHh-hHHHHH
Q 013645 197 IVFLGVITLGTILMCFLRKEED--KGEK-ETA-----DASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYS-GLQQAF 267 (439)
Q Consensus 197 ~~~~~~~~l~~~~~~~l~~~~~--~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~ 267 (439)
.+.+++.++..+..++++|+++ .++. +.. ..+.......++.+++..+.+++|+++......++. -...+.
T Consensus 192 ~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~ 271 (468)
T TIGR00788 192 LITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGA 271 (468)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCC
Confidence 3445555555444567787531 1111 000 000001112334455666778888887643322221 000011
Q ss_pred HHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHh---hccCCCCccc
Q 013645 268 VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI---NYSVTSGVLG 344 (439)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~ 344 (439)
..+.|.......+.+++.+|.+....+++++++....+++.+|++.|+. +..+.++.+++...... .|......-+
T Consensus 272 ~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~-l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~ 350 (468)
T TIGR00788 272 SGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLL-FGVTTLLYTLSSLFDLILVKRWNLAFGISD 350 (468)
T ss_pred CceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHH-HHHHHHHHHHHHhCceeeeeccccccCCCC
Confidence 1111111111235667789999888999999999999999999987763 44555555543211000 1110000000
Q ss_pred hHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHh
Q 013645 345 TLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIG 400 (439)
Q Consensus 345 ~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~ 400 (439)
........++.+++.+........++.+..|++.+ +.+|+++..+++|..++..++
T Consensus 351 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~g 407 (468)
T TIGR00788 351 EVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLG 407 (468)
T ss_pred eeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHH
Confidence 12344556777788777888889999999998764 578888888888877766544
No 104
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.65 E-value=4.2e-13 Score=136.62 Aligned_cols=306 Identities=12% Similarity=0.068 Sum_probs=164.1
Q ss_pred HHHhhhhhHHHHHH----HhchhHH-HHHHhHHHHHHHHh-hhcch------hhHHHHHHHHhhhHHHHHHhhhhhHHHH
Q 013645 71 SFTCFSLVASLVVR----VLGSKNA-LILGTTGYWLFVAA-NLFPS------WYTMVPASLYLGFAASIIWVGEGTYLTA 138 (439)
Q Consensus 71 ~~~~~~~~~g~l~d----r~G~r~~-l~~g~~~~~~~~~~-~~~~~------~~~li~~r~i~Gig~g~~~~~~~~~i~~ 138 (439)
.-++..++.|.++| |+||||. +..+....++.... +..|+ +..+++..++.+++.....+...+..+|
T Consensus 54 ~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~ 133 (473)
T PRK10429 54 WDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPT 133 (473)
T ss_pred HHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHH
Confidence 34677889999999 6698555 45565555554333 22221 2233445566677777777777777777
Q ss_pred HhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCC--CCCCCcchHHHHHHHHHHHHHHHHHH-hccC
Q 013645 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGTTLLFIVFLGVITLGTILMC-FLRK 215 (439)
Q Consensus 139 ~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~--~~~~~w~~~~~~~~~~~~~l~~~~~~-~l~~ 215 (439)
..+ ++++|.+..++-..+.++|..+++.+...+....+ +...+|+. ...+++++.++..+..+ ..||
T Consensus 134 lt~---------~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~-~~~i~~~~~~~~~~~~~~~~~e 203 (473)
T PRK10429 134 LTL---------DKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQM-FTLVLIAFFIVSTIITLRNVHE 203 (473)
T ss_pred hCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH-HHHHHHHHHHHHHHHHHcCcee
Confidence 763 57899998887666667776565554433321111 11123433 22233333333333322 3555
Q ss_pred CCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhccccc-ccchHHHHHHHH
Q 013645 216 EEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG-VSGVGGAMAVYG 294 (439)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~ 294 (439)
+.+.++++.++ +++.+.++.+ +.+++||.++.+....+..........+..+ ++.....+ .+..+.+....+
T Consensus 204 ~~~~~~~~~~~---~~~~~~~~~~---~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~-y~~~y~~~~~~~~~~~~~~~~ 276 (473)
T PRK10429 204 VYSSDNQVSAE---GSHLTLKDIV---ALIYKNDQLSCLLGMALAYNIASNIINGFAI-YYFTYVIGDADLFPYYLSYAG 276 (473)
T ss_pred cCCcccccccc---ccCCCHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHhhhee-eEEEEECCCHHHHHHHHHHHH
Confidence 42211111000 0112334332 2356888776655443333332222212211 21111122 233455556667
Q ss_pred HHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHH-hhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhh
Q 013645 295 AFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL 373 (439)
Q Consensus 295 i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~ 373 (439)
++.+++.++.+++.||+|+|+.+ ..+.++.+++..... ..+.+..+ ....++..++.|++.+..++..+++++|.
T Consensus 277 i~~ii~~~~~~~l~~r~gkk~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~l~g~~~~~~~~~~~am~ad~ 352 (473)
T PRK10429 277 AANLVTLILFPRLVKSLSRRILW-AGASIFPVLSCGVLLLMGLAAPHN---ALLIVIAGILLNIGTALFWVLQVIMVADT 352 (473)
T ss_pred HHHHHHHHHHHHHHHHcCcHHHH-HHHHHHHHHHHHHHHHHhccCchh---HHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 88899999999999999988754 344444333222111 11122221 24556677888999999999999999999
Q ss_pred ccCC-----c--hh-hHHHHHHHHHHHHHHHH
Q 013645 374 FKHD-----T--EG-AFAQLKVWQCASIAVVF 397 (439)
Q Consensus 374 ~p~~-----~--~~-a~s~~~~~~~~g~~i~~ 397 (439)
.|.+ + ++ .+|...+.+-+|.+++.
T Consensus 353 id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~ 384 (473)
T PRK10429 353 VDYGEYKLGIRCESIAYSVQTMVVKGGSAFAA 384 (473)
T ss_pred hhhhhHhcCccchhHHHHHHHHHHHHHHHHHH
Confidence 7632 2 22 46777676666655543
No 105
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.62 E-value=1.1e-12 Score=131.59 Aligned_cols=388 Identities=13% Similarity=0.069 Sum_probs=195.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHHHH----HHHHHHHhhhhhHHHHHH----HhchhHHHHHHhHH-
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLG----ILYTSFTCFSLVASLVVR----VLGSKNALILGTTG- 98 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~----~~~~~~~~~~~~~g~l~d----r~G~r~~l~~g~~~- 98 (439)
++++.++...+-+-.++.......+.+.++.+......+ +-.....+.+++.|.++| |+||||+++.+...
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 455566555555555555444433333333333332222 223344677889999999 59999999876443
Q ss_pred HHHHHHh-hhcchhh-----------------HHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccch--hhh
Q 013645 99 YWLFVAA-NLFPSWY-----------------TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVI--GSF 158 (439)
Q Consensus 99 ~~~~~~~-~~~~~~~-----------------~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~r--g~~ 158 (439)
..+.... ...++.. ..++.-.+..++.....+...++++|.. |+++| +++
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~----------p~~~~~~~~a 153 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLT----------GGDARRTRIA 153 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----------CchhHHHHHH
Confidence 2222222 2222221 1122222333455555555666677765 65544 689
Q ss_pred hHHHHHHHHHhhhhhhHHHHHhh--cCC-----C-CCC--CCcchHHHHHHHHHHHHHHHHH-HhccCCCcccccc----
Q 013645 159 NGEFWGMFASHQFVGNLITLAVL--KDD-----K-GGS--TSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKE---- 223 (439)
Q Consensus 159 ~g~~~~~~~~G~~iG~~i~~~l~--~~~-----~-~~~--~~w~~~~~~~~~~~~~l~~~~~-~~l~~~~~~~~~~---- 223 (439)
.++...+.++|.++|+.+++... ... . .+. .+-|. .|.+-+++.++..++. +++||.+...+++
T Consensus 154 ~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~ 232 (477)
T TIGR01301 154 NAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKS-CFLIDIILLAILTYIALSAVKENPLIGSDDFINS 232 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHH-HHHHHHHHHHHHHHHHeeeeeccCCCccccchhh
Confidence 99999999999999999887642 100 0 010 12233 3444344444444443 5577743211111
Q ss_pred -cccc-chhhhhhHHHHHHHHHHhhccchhHHHHHHHHH--hhHHH-HHHHhh-cchhhhc-c-ccc--ccc---hHH-H
Q 013645 224 -TADA-SVNFYSYLVSLSKSITTLLADVRMLLIIPLFAY--SGLQQ-AFVWAE-FTKEIVT-P-ALG--VSG---VGG-A 289 (439)
Q Consensus 224 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~g~~~-~~~~~~-~~~~~~~-~-~~~--~~~---~g~-~ 289 (439)
.++. +......+++.+++.+++ .|.++.+....++ .|+.. .++.+. ..+++.. + +-+ .++ .|. .
T Consensus 233 ~~~~~~~~~~~~~~~~i~~~~~~m--P~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~ 310 (477)
T TIGR01301 233 EAAPPSKHGEEAFFGELFGAFKYL--PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFG 310 (477)
T ss_pred hcccccccchhhhHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHH
Confidence 0000 000111233333333332 3445666554443 33321 111121 1211110 0 000 011 132 3
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHH-hhc-cCC--C-----C----ccc-hHHHHHHHHHH
Q 013645 290 MAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INY-SVT--S-----G----VLG-TLYPLIMAALL 355 (439)
Q Consensus 290 ~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~-~~~-~~~--~-----~----~~~-~~~~~~~~~l~ 355 (439)
...+++.+.+.+++..++.+|+|+|+.+-..+.++.++++...+ ... +++ . . ... ....++...+.
T Consensus 311 l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 390 (477)
T TIGR01301 311 LMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAIL 390 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHh
Confidence 44667777788888889999998644332355555555543221 111 100 0 0 000 14466788889
Q ss_pred hhhhhhhhhhHHHHHHhhccCC-c--hhhHHHHHHHHHHHHHHHHH----Hhhhh--hHHHHHHHHHHHHHHHHHHHHHH
Q 013645 356 GIGDGVLNTQLSALLGILFKHD-T--EGAFAQLKVWQCASIAVVFF----IGPYI--SLQAMLIVMVVGICVALVGILFL 426 (439)
Q Consensus 356 G~~~~~~~~~~~a~~~~~~p~~-~--~~a~s~~~~~~~~g~~i~~~----i~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 426 (439)
|+..+..++..++++++..|++ + +...|++|..-.+...+.-+ +.+.. +..+.+.+-++..+++++.-+++
T Consensus 391 Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~ 470 (477)
T TIGR01301 391 GIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALIL 470 (477)
T ss_pred hHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999853 2 33468888777655543221 22211 23345555555666666655544
Q ss_pred HH
Q 013645 427 TI 428 (439)
Q Consensus 427 ~~ 428 (439)
..
T Consensus 471 ~~ 472 (477)
T TIGR01301 471 LP 472 (477)
T ss_pred CC
Confidence 43
No 106
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.62 E-value=6.1e-20 Score=185.60 Aligned_cols=341 Identities=15% Similarity=0.126 Sum_probs=186.5
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcc---hhhHHHHHHHHhhhHHHHHHhhhhhHHHHH
Q 013645 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFP---SWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (439)
Q Consensus 64 ~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~---~~~~li~~r~i~Gig~g~~~~~~~~~i~~~ 139 (439)
..+..+.+..+++++.|.++||+|||+++..+.+++.+..+. ...+ ++..+.++|++.|++.|...+....|+.|.
T Consensus 51 ~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~ 130 (451)
T PF00083_consen 51 LTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEI 130 (451)
T ss_pred HHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 456667777889999999999999999999999887776554 3566 899999999999999999999999999999
Q ss_pred hhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCc-
Q 013645 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED- 218 (439)
Q Consensus 140 ~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~- 218 (439)
. |+++||+..++......+|..++..++....... +..+||.. +....+..++..+...++||.++
T Consensus 131 ~----------~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~--~~~~Wr~~-~~~~~~~~l~~~~~~~~~pESP~w 197 (451)
T PF00083_consen 131 A----------PPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS--DNWGWRIL-LIFGAIPSLLVLLLRFFLPESPRW 197 (451)
T ss_pred c----------cccccccccccccccccccccccccccccccccc--cccccccc-ccccccccccccccccccccccce
Confidence 7 8899999999988888888887777665542211 12358873 22223333333334467787543
Q ss_pred ---cc-ccccc----c--------cchhh-hhhHHHH---HHHHHHhhccch----hHHHHHHHHHhhHHHHHHHhhcch
Q 013645 219 ---KG-EKETA----D--------ASVNF-YSYLVSL---SKSITTLLADVR----MLLIIPLFAYSGLQQAFVWAEFTK 274 (439)
Q Consensus 219 ---~~-~~~~~----~--------~~~~~-~~~~~~~---~~~~~~~~~~~~----~~~l~~~~~~~g~~~~~~~~~~~~ 274 (439)
++ ++|.. + .+..+ .++.++. .....+.+++++ ........+............|.+
T Consensus 198 L~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~ 277 (451)
T PF00083_consen 198 LLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSP 277 (451)
T ss_pred ecccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccc
Confidence 11 11100 0 00000 0000000 011233444433 221111111111111111223333
Q ss_pred hhh-cccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHH--hhccCCCC-ccchHHHHH
Q 013645 275 EIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL--INYSVTSG-VLGTLYPLI 350 (439)
Q Consensus 275 ~~~-~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~ 350 (439)
.+. ..+.+.. -......++...++.++...+.||+|||+.+ +.+..+.+++...+. ..+..+.+ ... ....+
T Consensus 278 ~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~ 353 (451)
T PF00083_consen 278 SIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLL-IIGLLLMAICSLILGIIFFLGVSSSSWWS-ILSIV 353 (451)
T ss_pred ccccccccccc--ccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccc-cccce
Confidence 221 1222222 1122344556667777778999999998644 455555444332111 11111210 001 11222
Q ss_pred HHHHHh-hhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHHHHHH
Q 013645 351 MAALLG-IGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALV 421 (439)
Q Consensus 351 ~~~l~G-~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~~~----~~~~~~~~~~~~~~~~~~ 421 (439)
...++. .....+.+..+.+.+|++|.+.| .+.++......++..++..+.+.. +....+.+.++.++++.+
T Consensus 354 ~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i 430 (451)
T PF00083_consen 354 FLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAII 430 (451)
T ss_pred eeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHh
Confidence 222222 22234567777889999998865 456665555556666555444332 223344444444444443
No 107
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.61 E-value=6.3e-14 Score=140.86 Aligned_cols=297 Identities=13% Similarity=0.092 Sum_probs=176.6
Q ss_pred HHHhhhhhHHHHHH----HhchhHHHH-HHhHHHHHHHHhhh-c-c-h------hhHHHHHHHHhhhHHHHHHhhhhhHH
Q 013645 71 SFTCFSLVASLVVR----VLGSKNALI-LGTTGYWLFVAANL-F-P-S------WYTMVPASLYLGFAASIIWVGEGTYL 136 (439)
Q Consensus 71 ~~~~~~~~~g~l~d----r~G~r~~l~-~g~~~~~~~~~~~~-~-~-~------~~~li~~r~i~Gig~g~~~~~~~~~i 136 (439)
..++..++.|.++| |+||||..+ .|....++.....+ . | + ...+.+..++..++.........++.
T Consensus 49 ~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~ 128 (428)
T PF13347_consen 49 WDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALI 128 (428)
T ss_pred hhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcC
Confidence 34567788999999 899888665 45555555444432 3 3 1 12234556666777777766666677
Q ss_pred HHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCC--CCcchHHHHHHHHHHHHHHHHH-Hhc
Q 013645 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS--TSGTTLLFIVFLGVITLGTILM-CFL 213 (439)
Q Consensus 137 ~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~--~~w~~~~~~~~~~~~~l~~~~~-~~l 213 (439)
.|..+ ++++|.+..+.-..+..+|..+...+...+....+.+. .+|+.. ..+.+++.++..++. +..
T Consensus 129 ~~lt~---------~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~-~~v~~iv~~v~~~i~~~~~ 198 (428)
T PF13347_consen 129 PELTP---------DPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWM-ALVLAIVGLVFFLITFFFV 198 (428)
T ss_pred ccccc---------cHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHH-HHHHHHHHHHHhhhhhhee
Confidence 66652 46789999888777777777655555554443322111 256653 333444444444433 445
Q ss_pred cCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHh---hcchhhhcccccc-cchHHH
Q 013645 214 RKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWA---EFTKEIVTPALGV-SGVGGA 289 (439)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~-~~~g~~ 289 (439)
||++++.+++ +++.+.++. .+..++||.+..+....++.........+ +|.++. ++. +..+..
T Consensus 199 ke~~~~~~~~------~~~~~~~~~---~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~v----l~~~~~~~~~ 265 (428)
T PF13347_consen 199 KERSVEVTEQ------EKKISLRDS---LRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYV----LGNEGLISIF 265 (428)
T ss_pred eecccccccc------ccccccccc---hhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHH----hcCchhhHHH
Confidence 6622211111 111223332 44567888887766554444333322222 222222 222 345555
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHH
Q 013645 290 MAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSAL 369 (439)
Q Consensus 290 ~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~ 369 (439)
.....++.+++.+++++++||+|+|+.+ ..+.++.+++..+. .+.+..+ .+..++..++.|++.+..+...+++
T Consensus 266 ~~~~~~~~~v~~~~~~~l~~r~gk~~~~-~~~~~~~~~~~~~~--~~~~~~~---~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 266 MLIFFVASIVGSPLWGRLSKRFGKKKVY-IIGLLLAALGFLLL--FFLGPGS---PWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccceeeh-hhhHHHHHHHHHHH--HHHHhhh---HHHHHHHHHHhHhhhcccccccccc
Confidence 6677888899999999999999988754 56666665554322 2222112 3677888999999999999999999
Q ss_pred HHhhccCCc-------hh-hHHHHHHHHHHHHHHH
Q 013645 370 LGILFKHDT-------EG-AFAQLKVWQCASIAVV 396 (439)
Q Consensus 370 ~~~~~p~~~-------~~-a~s~~~~~~~~g~~i~ 396 (439)
++|+.++++ ++ .+|.+++.+-++..++
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la 374 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLA 374 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHH
Confidence 999987532 12 3567766666665544
No 108
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.61 E-value=6.8e-13 Score=129.49 Aligned_cols=374 Identities=13% Similarity=0.109 Sum_probs=193.9
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhhhhHhhhcc-CCCCchHHHHHHHHHHH----hhhhhHHHHHHHhchhHHHHHHhHHH
Q 013645 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNT-EGNLGTISLGILYTSFT----CFSLVASLVVRVLGSKNALILGTTGY 99 (439)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~g~~~~~~~~~~~~----~~~~~~g~l~dr~G~r~~l~~g~~~~ 99 (439)
+.+++++.++...+++|..+....+.-+.-.+ +.+++....+++++..+ +.+++.|.+.||+|.||-++......
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l 83 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAIL 83 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHH
Confidence 45668888888888888887766655554333 24566666666666554 45567899999999777554443221
Q ss_pred HH----HHH---hhh-cchhh-HHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhh
Q 013645 100 WL----FVA---ANL-FPSWY-TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ 170 (439)
Q Consensus 100 ~~----~~~---~~~-~~~~~-~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~ 170 (439)
.+ +.. ... ..|+. -.++..+..|+......+..-+|+.+.+.+ .+.-.|=.-...++|.
T Consensus 84 ~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~------------~~feYG~~R~wGSig~ 151 (412)
T PF01306_consen 84 LLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRR------------NGFEYGRARMWGSIGF 151 (412)
T ss_dssp HHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHH------------HSS-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH------------hcCCcchHHHHhhHHH
Confidence 11 111 111 12322 222233334444333334444444444422 2222232333346777
Q ss_pred hhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccch
Q 013645 171 FVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVR 250 (439)
Q Consensus 171 ~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (439)
+++..+++.+.... -+. .+++..+.+++..++.++.+++.+++.+ ..+.+..+++ +...++..+.+|+|+
T Consensus 152 ai~s~~~G~L~~i~------p~~-~fwi~s~~~~il~lll~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~l~k~~~ 221 (412)
T PF01306_consen 152 AIASLLAGILFNIN------PNI-IFWIASAAAIILLLLLLLLKPDVPPQAE-VADALGAKKD--KVSLKDVLSLFKMRN 221 (412)
T ss_dssp HHHHHHHHHHHHHH------HHH-HHHHHHHHHHHHHHHHHSS---SSSSS--SSTTSSS--------HHHHHHHTTSHH
T ss_pred HHHHHHhheeeeeC------ccH-HHHHHHHHHHHHHHHHHHcCCcCchhhh-hhcccccCCC--CCcHHHHHHHhcchh
Confidence 88888777665421 112 2334344333333333334322111110 0010001111 112456778999999
Q ss_pred hHHHHHHHHHhhHHH---HH---HHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHH
Q 013645 251 MLLIIPLFAYSGLQQ---AF---VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIA 324 (439)
Q Consensus 251 ~~~l~~~~~~~g~~~---~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~ 324 (439)
+|.+.... +|... .| ....+.....+.+.+.+..|+..++--+.+++.=.+..++.+|+|.|+.++ ++..+
T Consensus 222 fw~~~l~v--~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Ll-lag~i 298 (412)
T PF01306_consen 222 FWFFVLFV--IGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLL-LAGVI 298 (412)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH-HHHHH
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHH-HHHHH
Confidence 99876543 23211 11 011222222233345556777777777778888888899999999888665 44444
Q ss_pred HHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHH-HHHHHHHHHHHHHHHh--
Q 013645 325 QVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQ-LKVWQCASIAVVFFIG-- 400 (439)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~-~~~~~~~g~~i~~~i~-- 400 (439)
..+=.. ...+.++ ++.+.+.-.+.++-.+.......-++++.+|++- ++.+.. +++...+|..+.-.+.
T Consensus 299 ~~iRi~--~~~~~~~-----~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ 371 (412)
T PF01306_consen 299 MAIRII--GSGFATN-----PWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGY 371 (412)
T ss_dssp HHHHHH--HHHT--S-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHH--HHhhhcc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHh
Confidence 443322 3455544 3677888999999988888889999999998775 345553 3444455554432222
Q ss_pred --hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 401 --PYISLQAMLIVMVVGICVALVGILFLTIQV 430 (439)
Q Consensus 401 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
...++...+++++.+.+...+.-.+..++.
T Consensus 372 lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 372 LYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred hHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 223555666666666555555444444444
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.61 E-value=2e-12 Score=130.84 Aligned_cols=295 Identities=14% Similarity=0.020 Sum_probs=154.1
Q ss_pred HHHHHHhhhhhHHHHHHHh----chhHHH-HHHhHHHHHH-HHhhhcc-----h--hhHHHHHHHHhhhHHHHHHhhhhh
Q 013645 68 LYTSFTCFSLVASLVVRVL----GSKNAL-ILGTTGYWLF-VAANLFP-----S--WYTMVPASLYLGFAASIIWVGEGT 134 (439)
Q Consensus 68 ~~~~~~~~~~~~g~l~dr~----G~r~~l-~~g~~~~~~~-~~~~~~~-----~--~~~li~~r~i~Gig~g~~~~~~~~ 134 (439)
.-...++..++.|+++||. ||||.+ ..+.+...+. .+....+ + ....++...+.+++.+...+...+
T Consensus 53 ~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 132 (448)
T PRK09848 53 VRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGS 132 (448)
T ss_pred HHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhh
Confidence 3345567889999999996 777755 4454433322 2222111 1 122334456778888887776666
Q ss_pred HHHHHhhhhhhhcCCCcccchhhhhHHHHHHHH-----HhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 013645 135 YLTAAALSHASNHKLHEGTVIGSFNGEFWGMFA-----SHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL 209 (439)
Q Consensus 135 ~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~-----~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~ 209 (439)
...+... ++++|.+..++-..+.+ .+..++|.++........ ..|.. ...++.+++.+.
T Consensus 133 l~~~~~~---------~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~---~~~~~----~~~~~~v~~~~~ 196 (448)
T PRK09848 133 LATAMTQ---------QPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMV---SVYHF----WTIVLAIAGMVL 196 (448)
T ss_pred hhhhhcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchh---hhHHH----HHHHHHHHHHHH
Confidence 6555542 45678887665433322 334444544432211000 01111 112222233222
Q ss_pred H----HhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhccccccc-
Q 013645 210 M----CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS- 284 (439)
Q Consensus 210 ~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~- 284 (439)
. ...||+.+++ ++ +++.++ ++++++|||+++......+.............+.++ .+.++.+
T Consensus 197 ~~~~~~~~~e~~~~~-~~--------~~~~~~---~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~ 263 (448)
T PRK09848 197 YFICFKSTRENVVRI-VA--------QPSLKI---SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYV-RYVLNDTG 263 (448)
T ss_pred HHHHHcCcEeccCCC-cc--------CCCHHH---HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeE-eeecCChH
Confidence 2 1233332111 00 112222 244678999987765543332221111111222111 1123322
Q ss_pred c-hHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhh
Q 013645 285 G-VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 363 (439)
Q Consensus 285 ~-~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 363 (439)
. .+.......++.+++.++.+++.||+++|+.+ ..+.++..++... +.+.++.+ .+..++..++.|+|.+...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~-~~g~~~~~i~~~~--~~~~~~~~---~~~~~~~~~l~g~G~~~~~ 337 (448)
T PRK09848 264 LFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF-LIGALLGTCGYLL--FFWVSVWS---LPVALVALAIASIGQGVTM 337 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH-HHHHHHHHHHHHH--HHHcCchh---HHHHHHHHHHHHHHHHHHH
Confidence 2 23333334566788899999999999987644 5666665554432 22333222 2445566778899999999
Q ss_pred hhHHHHHHhhccCCc--------hhhHHHHHHHHHHHHHHHH
Q 013645 364 TQLSALLGILFKHDT--------EGAFAQLKVWQCASIAVVF 397 (439)
Q Consensus 364 ~~~~a~~~~~~p~~~--------~~a~s~~~~~~~~g~~i~~ 397 (439)
+..+++..|..|+++ +..+|.+++.+.+|.+++.
T Consensus 338 ~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~ 379 (448)
T PRK09848 338 TVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGG 379 (448)
T ss_pred HHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHH
Confidence 999999999987542 2346788888877776654
No 110
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.59 E-value=4.2e-15 Score=142.68 Aligned_cols=107 Identities=16% Similarity=0.108 Sum_probs=86.6
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhc-----c--hhhHHHHHHHHhhhHHHHHHhhhhhHH
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLF-----P--SWYTMVPASLYLGFAASIIWVGEGTYL 136 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~-----~--~~~~li~~r~i~Gig~g~~~~~~~~~i 136 (439)
..+-+....++|++.|++.||+|||+++...+++..++++. .+. + -...+.+.|++.|+|.|+-+|...++.
T Consensus 90 n~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~ 169 (538)
T KOG0252|consen 90 NAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIM 169 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHh
Confidence 44555566789999999999999999999999887776643 221 1 245677899999999999999999988
Q ss_pred HHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhh
Q 013645 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (439)
Q Consensus 137 ~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~ 181 (439)
+|.+ .+++||...+...++...|...|.+++..+.
T Consensus 170 SE~a----------n~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~ 204 (538)
T KOG0252|consen 170 SESA----------NKKTRGAFIAAVFAMQGFGILAGGIVALIVS 204 (538)
T ss_pred hhhh----------hhccccceeEEEEEecchhHhhccHHHHHHH
Confidence 8887 6789999999998888888888887766554
No 111
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.59 E-value=2.1e-11 Score=122.96 Aligned_cols=355 Identities=7% Similarity=-0.026 Sum_probs=185.2
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhhhHhhh-ccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHh-chhHHHHHHhHHH
Q 013645 26 YTRDVHILSCAFLLIFLAYGAAQNLETTV-NTEGNLGTIS----LGILYTSFTCFSLVASLVVRVL-GSKNALILGTTGY 99 (439)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l-~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~-G~r~~l~~g~~~~ 99 (439)
..|.++.+....+.--.+++....+.+.. .++.+.+... .+.......++++++|+++||+ ||||++.+|.+..
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 44455555555555555555555444432 2222333322 3334444456788999999999 9999999998876
Q ss_pred HHHHHhh-hcc-hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcc--cchhhhhHHHHHHHHHhhhhhhH
Q 013645 100 WLFVAAN-LFP-SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEG--TVIGSFNGEFWGMFASHQFVGNL 175 (439)
Q Consensus 100 ~~~~~~~-~~~-~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~--~~rg~~~g~~~~~~~~G~~iG~~ 175 (439)
.+..... ..+ +...+++.-.+.++|.|...+...++++|.. |+ ++|..++++++...++|..++|.
T Consensus 87 ~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elf----------p~~~~~R~sgf~i~Y~~~nlG~~iap~ 156 (493)
T PRK15462 87 AIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELY----------EPTDPRRDGGFSLMYAAGNVGSIIAPI 156 (493)
T ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHC----------CCCCccccceehHHHHHHHHHHHHHHH
Confidence 6543322 211 2122333334455666666676678888886 43 37999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCC-cc---ccccccccchhh-----------------hhh
Q 013645 176 ITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE-DK---GEKETADASVNF-----------------YSY 234 (439)
Q Consensus 176 i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~-~~---~~~~~~~~~~~~-----------------~~~ 234 (439)
+.+.+... .+|+.. |.+.++..+++++..++-++.. +. ++++.++++... ...
T Consensus 157 l~g~L~~~-----~Gw~~~-F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (493)
T PRK15462 157 ACGYAQEE-----YSWAMG-FGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVL 230 (493)
T ss_pred HHHHHHhh-----hChHHH-HHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888643 358774 3333433444444433322211 10 000000000000 000
Q ss_pred HHHHHHH-----------------HHHhh---ccchhHHHHHH-----HHHhhHHHHH-HHhhcchhhhccc-cccc-ch
Q 013645 235 LVSLSKS-----------------ITTLL---ADVRMLLIIPL-----FAYSGLQQAF-VWAEFTKEIVTPA-LGVS-GV 286 (439)
Q Consensus 235 ~~~~~~~-----------------~~~~~---~~~~~~~l~~~-----~~~~g~~~~~-~~~~~~~~~~~~~-~~~~-~~ 286 (439)
..++... ..+.. ..+|++...++ +|+..++|.. ..+.|...-.++. .|.+ ..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~ 310 (493)
T PRK15462 231 FWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPT 310 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCH
Confidence 0000000 00001 01233333322 2333344422 1223333221222 2222 23
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcCCC--Cc----ceehhhHHHHHHHHHHHHHh--hccCCCCccchHHHHHHHHHHhhh
Q 013645 287 GGAMAVYGAFDAICSLAAGRLTTGLP--SI----TFIVSGGAIAQVVVFLWILI--NYSVTSGVLGTLYPLIMAALLGIG 358 (439)
Q Consensus 287 g~~~~~~~i~~~ig~~~~G~l~d~~~--~r----~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~G~~ 358 (439)
.....++.+..++.+++.+++=.|.. +| ..-+..|+++.++++..+.. ....+.......++.+..+++++|
T Consensus 311 ~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~g 390 (493)
T PRK15462 311 AMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFA 390 (493)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH
Confidence 44456677777777776655532221 11 01134677766666543211 111111112345677889999999
Q ss_pred hhhhhhhHHHHHHhhccCCch-hhHHHHHHHH-HHHHHHH
Q 013645 359 DGVLNTQLSALLGILFKHDTE-GAFAQLKVWQ-CASIAVV 396 (439)
Q Consensus 359 ~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~-~~g~~i~ 396 (439)
+-+..|.-.+.++++.|++-+ ...|.+.+.. .+|..++
T Consensus 391 El~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~ 430 (493)
T PRK15462 391 ELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLA 430 (493)
T ss_pred HHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998754 4567765532 4555443
No 112
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.58 E-value=8.7e-15 Score=131.96 Aligned_cols=349 Identities=15% Similarity=0.199 Sum_probs=196.3
Q ss_pred hhhhhhHhhhccCCCCchHHHHHHHHHHH----hhhhhHHHHHHH-hchhH-HHHHHhH---HHHHHHHhhhcchhhHHH
Q 013645 45 GAAQNLETTVNTEGNLGTISLGILYTSFT----CFSLVASLVVRV-LGSKN-ALILGTT---GYWLFVAANLFPSWYTMV 115 (439)
Q Consensus 45 ~~~~~~~~~l~~~~~~g~~~~~~~~~~~~----~~~~~~g~l~dr-~G~r~-~l~~g~~---~~~~~~~~~~~~~~~~li 115 (439)
.....++.++..+.+........+|..|. +-+++.|++.|| +|-|. +++.+.. +..++.++...+.+++++
T Consensus 61 d~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~ 140 (459)
T KOG4686|consen 61 DAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTML 140 (459)
T ss_pred CCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 44445666666666665555555666554 456789999997 66654 2333332 234455556778999999
Q ss_pred HHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCC--CCCCCcch
Q 013645 116 PASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGTT 193 (439)
Q Consensus 116 ~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~--~~~~~w~~ 193 (439)
..|++.|||.-..-++|++|...++ ..|+.+.++|++....-+|...-..+..++....+ .++.+ .+
T Consensus 141 ~GRF~FGIGgESlAVaQN~yav~wF----------KGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~g-hT 209 (459)
T KOG4686|consen 141 AGRFLFGIGGESLAVAQNKYAVYWF----------KGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVG-HT 209 (459)
T ss_pred hhheeeccCchhhhhhhcceeEEEe----------cCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccch-HH
Confidence 9999999998888899999987776 78899999999988888887665444444332110 00111 11
Q ss_pred H--HHHHHHHHHHHHHHHH-H--hccCCCccc---cccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHH
Q 013645 194 L--LFIVFLGVITLGTILM-C--FLRKEEDKG---EKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQ 265 (439)
Q Consensus 194 ~--~~~~~~~~~~l~~~~~-~--~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 265 (439)
. .+..+.+..+.-.++. . -+.+.+.++ ++|....| .++. .+. +. ..|.+|.+.. ++.
T Consensus 210 ~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~e~g~~Ge---~pkL----tdv-~~-f~ppfw~~~i------icv 274 (459)
T KOG4686|consen 210 LLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHLEEGFLGE---EPKL----TDV-NT-FYPPFWVLVI------ICV 274 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhcCcccC---Cccc----ccc-cc-cCccHHHHHH------HHH
Confidence 1 1112222222111111 1 111111100 11110000 0000 111 11 2455665443 233
Q ss_pred HHHHhhcch-----hhhcc--cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccC
Q 013645 266 AFVWAEFTK-----EIVTP--ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV 338 (439)
Q Consensus 266 ~~~~~~~~~-----~~~~~--~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~ 338 (439)
.|+..++|. .+.++ +++....+.+.+..-..+.+.+.+.|.++||+|++..++..+++...++=. .+.++
T Consensus 275 ~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~--~l~Ft- 351 (459)
T KOG4686|consen 275 LYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHS--GLFFT- 351 (459)
T ss_pred HHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhh--hHHhh-
Confidence 344444442 22222 344434455544444445777889999999999765333222222222211 11222
Q ss_pred CCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhh--------hhhHHHHH
Q 013645 339 TSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP--------YISLQAML 409 (439)
Q Consensus 339 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~--------~~~~~~~~ 409 (439)
..-.++...+.|+.++..--..|.+++.+.|+++ +++|+..+..|++|-++.+++.+ +...+..+
T Consensus 352 ------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ff 425 (459)
T KOG4686|consen 352 ------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFF 425 (459)
T ss_pred ------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHH
Confidence 1235677888899888877778889999999987 67999999999999887776653 33455555
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 013645 410 IVMVVGICVALVGILFLTI 428 (439)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~ 428 (439)
.+...+.+.+....+.+++
T Consensus 426 l~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 426 LIIGLMALTSVGILFYLNK 444 (459)
T ss_pred HHHHHHHHHHHHHHhheec
Confidence 5555555555554444443
No 113
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.58 E-value=8.3e-13 Score=127.16 Aligned_cols=388 Identities=15% Similarity=0.074 Sum_probs=201.5
Q ss_pred cccchhHHHHHHHHHHHHHH------HhhhhhhHhhhccCCCCchHHHHHHHH-HHHhhhhhHHHHHHHhchhHHHHHHh
Q 013645 24 KNYTRDVHILSCAFLLIFLA------YGAAQNLETTVNTEGNLGTISLGILYT-SFTCFSLVASLVVRVLGSKNALILGT 96 (439)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~l~~~~~~g~~~~~~~~~-~~~~~~~~~g~l~dr~G~r~~l~~g~ 96 (439)
|-+.|+|++|.+..+..+.+ |.++++.........+. ...++.+|. .+....+.+-|+.||+|-|..+.++.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Ygs~~~-~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYGSSSA-ADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhcchHH-HHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 35677787776666655544 22222222222211111 123445554 33445677889999999999999999
Q ss_pred HHHHHHHHhh-h--cc----hhh--HHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHH
Q 013645 97 TGYWLFVAAN-L--FP----SWY--TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFA 167 (439)
Q Consensus 97 ~~~~~~~~~~-~--~~----~~~--~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~ 167 (439)
..-++....- . .| .+. +......+.+.++-.....-..+-+. |++++||..+..+-...+.
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~----------WF~~~qra~A~~~~v~~n~ 186 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAV----------WFPPDQRAIATVLGVMGNP 186 (480)
T ss_pred HHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHh----------hCCcchhhhhhhHHHhcch
Confidence 8877755432 1 12 222 44445555555554433332222222 3589999999998888888
Q ss_pred HhhhhhhHHHHHhhcCCC-CCCCCcch-HHHHHHHHHHHHHHHHHHhcc-CCCccccccccccchhhhhhHHHHHHHHHH
Q 013645 168 SHQFVGNLITLAVLKDDK-GGSTSGTT-LLFIVFLGVITLGTILMCFLR-KEEDKGEKETADASVNFYSYLVSLSKSITT 244 (439)
Q Consensus 168 ~G~~iG~~i~~~l~~~~~-~~~~~w~~-~~~~~~~~~~~l~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (439)
+|.++|.++...+..+.. ....+|.. .++....++..+.+.+..+.+ ++++.+....+.. ....+ ..+++++
T Consensus 187 LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~--~~~~~---f~~si~~ 261 (480)
T KOG2563|consen 187 LGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAA--LQDAS---FPKSIKS 261 (480)
T ss_pred HHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhh--hhcCc---HHHHHHH
Confidence 999999988887766542 22234432 122222333333322333332 2222111110000 00111 2346778
Q ss_pred hhccchhHHHHHHHHHhhHHHH-HH--HhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhH
Q 013645 245 LLADVRMLLIIPLFAYSGLQQA-FV--WAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGG 321 (439)
Q Consensus 245 ~~~~~~~~~l~~~~~~~g~~~~-~~--~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g 321 (439)
.++|+++.++... .|+..+ |+ .+.+...+.-.+++....|++....-++.++++.+.|.+.||.++-+......
T Consensus 262 ~~~n~~F~il~~~---ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~ 338 (480)
T KOG2563|consen 262 CFKNRQFIILAIC---YGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVL 338 (480)
T ss_pred HHcCccHHHHHHH---HhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHH
Confidence 9999999876543 222221 21 11111122112333346778878888889999999999999986433222222
Q ss_pred HHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhh-ccCCchhhHHHHH-HHHHHHHHHHHHH
Q 013645 322 AIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL-FKHDTEGAFAQLK-VWQCASIAVVFFI 399 (439)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~-~p~~~~~a~s~~~-~~~~~g~~i~~~i 399 (439)
.....++-.+ +...+.+. .+.++++....++|++.....|.-..+-.|. ||..++...|..+ ..|..+....+..
T Consensus 339 ~~~~~v~~~~-l~~~t~~~--~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~ 415 (480)
T KOG2563|consen 339 YLFALVGTLM-LLTCTLFL--GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIM 415 (480)
T ss_pred HHHHHHHHHH-HHHhhccC--CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHH
Confidence 2222222111 12222221 1235677777788888777777655555544 5655554445333 3333444444333
Q ss_pred h----hh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013645 400 G----PY---ISLQAMLIVMVVGICVALVGILFLTIQVEKA 433 (439)
Q Consensus 400 ~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
. .. .+.....+.+...++++++.-.+...+++|.
T Consensus 416 ~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~ 456 (480)
T KOG2563|consen 416 GILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRL 456 (480)
T ss_pred HHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhH
Confidence 2 11 1233344555555566666666666666554
No 114
>PRK11462 putative transporter; Provisional
Probab=99.57 E-value=9.2e-12 Score=126.18 Aligned_cols=273 Identities=9% Similarity=0.007 Sum_probs=151.4
Q ss_pred HHHhhhhhHHHHHHH----hchhHHHHH-HhHHHHHHHHhh-hcch------hhHHHHHHHHhhhHHHHHHhhhhhHHHH
Q 013645 71 SFTCFSLVASLVVRV----LGSKNALIL-GTTGYWLFVAAN-LFPS------WYTMVPASLYLGFAASIIWVGEGTYLTA 138 (439)
Q Consensus 71 ~~~~~~~~~g~l~dr----~G~r~~l~~-g~~~~~~~~~~~-~~~~------~~~li~~r~i~Gig~g~~~~~~~~~i~~ 138 (439)
.-++.-++.|.++|| +||||..++ |.+..++..... ..|+ ...+.+..++..++.........+..++
T Consensus 57 ~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~ 136 (460)
T PRK11462 57 LDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGV 136 (460)
T ss_pred HHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 346788999999996 688877654 545555544432 2332 2234445666777777777777777777
Q ss_pred HhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCC--CCCCCcchHHHHHHHHHHHHHHHHHH-hccC
Q 013645 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGTTLLFIVFLGVITLGTILMC-FLRK 215 (439)
Q Consensus 139 ~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~--~~~~~w~~~~~~~~~~~~~l~~~~~~-~l~~ 215 (439)
.++ +++||.+..++...+.++|..+++.+...+....+ +...+|+. ...++++++++...+.+ ..||
T Consensus 137 lt~---------d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~-~~~i~~ii~~i~~~i~~~~~kE 206 (460)
T PRK11462 137 ITN---------DPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQG-GIAVLSVVAFMMLAFCFFTTKE 206 (460)
T ss_pred hcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH-HHHHHHHHHHHHHHHHHhccee
Confidence 763 57899999999888888888777766554433221 11123443 22333443333332222 2344
Q ss_pred CCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHH---HHhhcchhhhcccccc-cchHHHHH
Q 013645 216 EEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAF---VWAEFTKEIVTPALGV-SGVGGAMA 291 (439)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~-~~~g~~~~ 291 (439)
+++.+ ++ +.+.++. ++..++||.++.+....+........ ...+|.++. .+. +..+.+..
T Consensus 207 ~~~~~-~~--------~~~~~~~---l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~----~g~~~~~~~~l~ 270 (460)
T PRK11462 207 RVEAP-PT--------TTSMRED---LRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI----LGTPEVFVAFLT 270 (460)
T ss_pred ccCCC-cc--------CCCHHHH---HHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh----cCChHHHHHHHH
Confidence 32211 10 1123333 33566787776654432222221111 112333332 222 22344556
Q ss_pred HHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHH
Q 013645 292 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG 371 (439)
Q Consensus 292 ~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~ 371 (439)
.++++.+++.++++++.||+++|+... .+..+..+.... ....+ +.+ ....++..+++|++.+...+..+++++
T Consensus 271 ~~~i~~iig~~l~~~l~~r~gkk~~~~-~~~~~~~~~~~~-~~~~~-~~~---~~~~~~~~~l~g~~~~~~~~l~~~m~a 344 (460)
T PRK11462 271 TYCVGNLIGSALAKPLTDWKCKVTIFW-WTNALLAVISLA-MFFVP-MQA---SITMFVFIFVIGVLHQLVTPIQWVMMS 344 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHH-HHHHHHHHHHHH-HHHhc-hhH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788889999999999999998776432 232222221111 11222 211 123444556678888787888888888
Q ss_pred hhcc
Q 013645 372 ILFK 375 (439)
Q Consensus 372 ~~~p 375 (439)
|..+
T Consensus 345 d~~d 348 (460)
T PRK11462 345 DTVD 348 (460)
T ss_pred HhHh
Confidence 8876
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.46 E-value=6.1e-10 Score=107.26 Aligned_cols=325 Identities=15% Similarity=0.106 Sum_probs=186.0
Q ss_pred HHhhhhhHHHHHHHhc-----hhHHHHHHhHHHHHH---HHhh----hcc--------hhh---HHHHHHHHhhhHHHHH
Q 013645 72 FTCFSLVASLVVRVLG-----SKNALILGTTGYWLF---VAAN----LFP--------SWY---TMVPASLYLGFAASII 128 (439)
Q Consensus 72 ~~~~~~~~g~l~dr~G-----~r~~l~~g~~~~~~~---~~~~----~~~--------~~~---~li~~r~i~Gig~g~~ 128 (439)
.+...+..|+.+|+.+ ||..++++....... .+.. +.. .+. ....+-.+.|+|.+..
T Consensus 27 ~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s 106 (403)
T PF03209_consen 27 VAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHAS 106 (403)
T ss_pred HHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHh
Confidence 3456678999999999 999887776543221 1111 111 221 2233445667777776
Q ss_pred HhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHH
Q 013645 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 208 (439)
Q Consensus 129 ~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~ 208 (439)
-++-.++++|.+ |||+|+++.++.|.+...|.+++..+.+.+....+ -.++ .-++-...++...
T Consensus 107 ~T~~lALl~D~~----------~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s-----~~rL-~~v~~~~a~i~~~ 170 (403)
T PF03209_consen 107 GTSFLALLADLA----------PEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS-----PERL-IQVIQGVALIALL 170 (403)
T ss_pred HHHHHHHHHhcC----------CHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccC-----HHHH-HHHHHHHHHHHHH
Confidence 677777777776 89999999999999999999999988777765432 1121 1122222222222
Q ss_pred ---HHHhccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHH----Hhhcchhhhcccc
Q 013645 209 ---LMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFV----WAEFTKEIVTPAL 281 (439)
Q Consensus 209 ---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~----~~~~~~~~~~~~~ 281 (439)
+..+=.|+++.++.+. ++++..++++. +.+...+|+....+...+ .+....+. ...|...+ .++
T Consensus 171 l~~ia~wg~E~r~~~~~~~---~~~~~~~f~~a---~~~~~~~~~a~~f~~fl~-l~t~a~~~QD~iLEPygg~V--fgm 241 (403)
T PF03209_consen 171 LNLIALWGQEPRRSRRAAA---AERPRPPFREA---WRQVWASPQARRFFVFLF-LGTLAFFMQDVILEPYGGEV--FGM 241 (403)
T ss_pred HHHHHHHhcccCCcccccC---CCCCCccHHHH---HHHHHhCCChhHHHHHHH-HHHHHHHhhHHHcCCchhHH--cCC
Confidence 1222223332211100 01122334443 334556777655433221 22211111 11122111 356
Q ss_pred cccchHHHHHHHHHHHHHHHHhhhhhhc-CCCCcceehhhHHHHHHHHHHHHHh-hccCCCCccchHHHHHHHHHHhhhh
Q 013645 282 GVSGVGGAMAVYGAFDAICSLAAGRLTT-GLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 282 ~~~~~g~~~~~~~i~~~ig~~~~G~l~d-~~~~r~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
+++++.......+.+..+|-...|++.. |.+++ .....|+...++++..+.. .+..+ .+.+....+++|++.
T Consensus 242 sv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-~~a~~G~~~~~~~f~lii~a~~~~~-----~~~~~~~~~l~G~g~ 315 (403)
T PF03209_consen 242 SVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-RTAALGCLLGALAFALIILAGPLGS-----PWLFRPGVFLLGLGN 315 (403)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHhccc-----chHHHHHHHHHHHhh
Confidence 6667777788888888888888887765 44433 3556777777666543322 22222 256778899999999
Q ss_pred hhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHh--------------hhhhHHHHHHHHHHHHHHHHHHHH
Q 013645 360 GVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIG--------------PYISLQAMLIVMVVGICVALVGIL 424 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~--------------~~~~~~~~~~~~~~~~~~~~~~~~ 424 (439)
+.+....-+...++.++++. ...|.....|..+..++-+.+ +...|...|.+=++.++++.+...
T Consensus 316 G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 316 GLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred hHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888888876654 355777777766555443332 223455555555555555555443
Q ss_pred HHH
Q 013645 425 FLT 427 (439)
Q Consensus 425 ~~~ 427 (439)
.+.
T Consensus 396 ~l~ 398 (403)
T PF03209_consen 396 RLD 398 (403)
T ss_pred Hhh
Confidence 333
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.44 E-value=4.9e-10 Score=109.98 Aligned_cols=351 Identities=12% Similarity=0.035 Sum_probs=206.9
Q ss_pred hhhhhHHHHHHH-hchhHHHHHHhHHHHHHHHh-hhc--chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCC
Q 013645 74 CFSLVASLVVRV-LGSKNALILGTTGYWLFVAA-NLF--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (439)
Q Consensus 74 ~~~~~~g~l~dr-~G~r~~l~~g~~~~~~~~~~-~~~--~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~ 149 (439)
...+++|+++|| +|+|++++.|.+++.+.... ... .+...++++-++.++|.|..=+...+.+.+..++.
T Consensus 76 ~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~------ 149 (498)
T COG3104 76 LTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKD------ 149 (498)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCC------
Confidence 456789999999 79999999999988775544 232 34666777888888999999888888998887542
Q ss_pred CcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCc--------ccc
Q 013645 150 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED--------KGE 221 (439)
Q Consensus 150 ~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~--------~~~ 221 (439)
+.+|-..+++++...++|..++|.+...+..+. +|.. -|...++-+.++++.+++.|+... .+.
T Consensus 150 --DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~-----g~~~-gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~ 221 (498)
T COG3104 150 --DPRRDGGFTLFYMGINIGSLIAPIITGLLAINY-----GWHV-GFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPL 221 (498)
T ss_pred --CcccCCCccEEEEEeehHHHHHHHHHHHHHHhh-----CHHH-HHHHHHHHHHHHHHHHHHccchhcCCCCCCCccch
Confidence 334777788888888999999999988886543 4654 355555555666666555443211 110
Q ss_pred cccccc------------ch----hhhhhH---------HHHHHHHHHhh------cc-chhHHHHHHH-----HHhhHH
Q 013645 222 KETADA------------SV----NFYSYL---------VSLSKSITTLL------AD-VRMLLIIPLF-----AYSGLQ 264 (439)
Q Consensus 222 ~~~~~~------------~~----~~~~~~---------~~~~~~~~~~~------~~-~~~~~l~~~~-----~~~g~~ 264 (439)
...... .. ...+.+ ........+.+ .+ +|.+..++++ |+...+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~ 301 (498)
T COG3104 222 SFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYE 301 (498)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 00 000000 00000001111 11 2233333332 233333
Q ss_pred HH-HHHhhcchhhhccc-cccc-chHHHHHHHHHHHHHHHHhhhhhhcCCCC--c----ceehhhHHHHHHHHHHHHHhh
Q 013645 265 QA-FVWAEFTKEIVTPA-LGVS-GVGGAMAVYGAFDAICSLAAGRLTTGLPS--I----TFIVSGGAIAQVVVFLWILIN 335 (439)
Q Consensus 265 ~~-~~~~~~~~~~~~~~-~~~~-~~g~~~~~~~i~~~ig~~~~G~l~d~~~~--r----~~~~~~g~~~~~~~~~~~~~~ 335 (439)
|. ...+.|.....+++ +|.+ .....-++..+..++.+++..++-.|.++ | ..-+-+|..++..+++.+...
T Consensus 302 Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~ 381 (498)
T COG3104 302 QMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLA 381 (498)
T ss_pred hccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 32 12233443333333 3322 23444556666666666665554433221 1 111234555555554322111
Q ss_pred --ccCC-CCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhh-------h--
Q 013645 336 --YSVT-SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP-------Y-- 402 (439)
Q Consensus 336 --~~~~-~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~-------~-- 402 (439)
+..+ .+....++.....++.++|+-...|+-.+.++++.|+.- ..+.|++-+....|..++--+++ .
T Consensus 382 ~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~ 461 (498)
T COG3104 382 GIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYT 461 (498)
T ss_pred HHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhh
Confidence 2221 122234677889999999999999999999999999874 34778887877777776644443 1
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 013645 403 -ISLQAMLIVMVVGICVALVGILFLTIQVEKAFYSPR 438 (439)
Q Consensus 403 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
......++.+....++..+..+.+..+.+|..+.+|
T Consensus 462 ~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~r~~~~~~ 498 (498)
T COG3104 462 AFIEGRVFGTIGVVAIVIGILLLLLSPKLNRMMKGVD 498 (498)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcCCC
Confidence 234466777777777778888888888888877654
No 117
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.43 E-value=1.4e-10 Score=111.33 Aligned_cols=334 Identities=12% Similarity=0.087 Sum_probs=196.0
Q ss_pred HHHhhhhhHHHHHHHhchhHHHHHHhHHHHH-HHHh--hhcc--hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhh
Q 013645 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWL-FVAA--NLFP--SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (439)
Q Consensus 71 ~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~-~~~~--~~~~--~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~ 145 (439)
.-++-+++.|.++|+.|+||..+.......+ ++++ ...+ +++..++.-++..++.....+..++.+.+..
T Consensus 70 lia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~----- 144 (438)
T COG2270 70 LIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLT----- 144 (438)
T ss_pred HHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhc-----
Confidence 3456678889999999988876554443332 3333 2233 5666667778888888877777888887776
Q ss_pred hcCCCcccchhhhhHHHHHHHHHhhhhhhHHHH--HhhcC----------CC-CCCCCcchHHHHHHHHHHH-HHHHHHH
Q 013645 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL--AVLKD----------DK-GGSTSGTTLLFIVFLGVIT-LGTILMC 211 (439)
Q Consensus 146 ~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~--~l~~~----------~~-~~~~~w~~~~~~~~~~~~~-l~~~~~~ 211 (439)
++++.++..++-|....+|.++--.+.. ..... .+ .....-|.. +.+.++-.+ ..+...+
T Consensus 145 -----~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~-~~l~A~W~li~~iPm~~ 218 (438)
T COG2270 145 -----TKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRIT-GLLAALWWLLFALPMIL 218 (438)
T ss_pred -----CccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhH-HHHHHHHHHHHHhHHHh
Confidence 6677788777777666666655443321 11110 00 000111221 211111111 2222334
Q ss_pred hccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHH--HHHHhhHHHHHH-HhhcchhhhcccccccchHH
Q 013645 212 FLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIP--LFAYSGLQQAFV-WAEFTKEIVTPALGVSGVGG 288 (439)
Q Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~g~ 288 (439)
.++++++..+.+ +..-...+|+...+.++..+++.+.+... +++.-|....+. .+.|... ..+++..++..
T Consensus 219 ~v~~~~~~~~~~----~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~--~~gls~~~lll 292 (438)
T COG2270 219 NVHDAEKISSPP----PTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAA--DLGLSSTELLL 292 (438)
T ss_pred cccccccccccc----hHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHH--HcCccHHHHHH
Confidence 455544321111 01112344544445555555655544322 233345544332 2233321 11344445666
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHH
Q 013645 289 AMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSA 368 (439)
Q Consensus 289 ~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a 368 (439)
+.....+..++|+++.|+|.||++.|+. +..+.++..+..+++. +.... .-.+++..+.|+..+..|...-+
T Consensus 293 ~g~~~~vvA~lg~ii~g~Ld~rfg~k~v-l~~~lvi~~~~~~~~~--~~~~~-----~~f~i~gll~g~s~G~~qA~SRS 364 (438)
T COG2270 293 IGIALSVVAALGAIIAGFLDERFGSKPV-LMIGLVILSIAALYLI--FLEGE-----LDFWILGLLVGTSLGGAQASSRS 364 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcee-ehHHHHHHHHHHHHHH--Hcccc-----HHHHHHHHHHHHhcchHHHHHHH
Confidence 6678888999999999999999998864 4566665543222222 22121 34667888899999999999999
Q ss_pred HHHhhccCCchh-hHHHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 369 LLGILFKHDTEG-AFAQLKVWQCASIAVVFFIGP-----YISLQAMLIVMVVGICVALVGILFLTIQ 429 (439)
Q Consensus 369 ~~~~~~p~~~~~-a~s~~~~~~~~g~~i~~~i~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (439)
+.+++.|++++. .+|+|++..-.++..+++.-. ..+.+..+..+.+++.++.+.++++.-+
T Consensus 365 y~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 365 YLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999999999865 689999888777777764432 3356677777777778888777655443
No 118
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.40 E-value=3.9e-11 Score=112.48 Aligned_cols=136 Identities=11% Similarity=0.080 Sum_probs=95.4
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHH-HhhhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhh
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV-AANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~-~~~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~ 143 (439)
....+..+.+++...|.++|++|||+......+.-+++. ++...||+..+.+.|.+.|+|.|+ .|...++-.+.-
T Consensus 119 t~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~l--- 194 (528)
T KOG0253|consen 119 TLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFL--- 194 (528)
T ss_pred HHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhc---
Confidence 445566677899999999999999999988887665543 446789999999999999999988 444334333443
Q ss_pred hhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCc
Q 013645 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (439)
Q Consensus 144 a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~ 218 (439)
|..+|+.-+=.. +.+..|.++...++.....+ .|||+..+..-.-++ +.....+.++|.++
T Consensus 195 -------p~~~r~~~~V~~-~~waig~v~ea~law~vm~~-----~gwr~~l~~~~~pl~-~~a~f~~w~~ESpR 255 (528)
T KOG0253|consen 195 -------PSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN-----FGWRYLLFTSSTPLM-FAARFLVWVYESPR 255 (528)
T ss_pred -------cCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHhHHH-HHHHHHhhcccCcc
Confidence 667777765554 67789999999988877654 368885444432222 22223356777543
No 119
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.38 E-value=1.5e-09 Score=107.42 Aligned_cols=311 Identities=12% Similarity=0.100 Sum_probs=174.3
Q ss_pred CCCchHHHHHHHH----HHHhhhhhHHHHHHH----hchhHHHH-HHhHHHHHHHHh-hhcch------hhHHHHHHHHh
Q 013645 58 GNLGTISLGILYT----SFTCFSLVASLVVRV----LGSKNALI-LGTTGYWLFVAA-NLFPS------WYTMVPASLYL 121 (439)
Q Consensus 58 ~~~g~~~~~~~~~----~~~~~~~~~g~l~dr----~G~r~~l~-~g~~~~~~~~~~-~~~~~------~~~li~~r~i~ 121 (439)
.++.....+.++. .-++.-++.|.++|| +||+|..+ .+.+.+++.... +..|+ +.-.++...+.
T Consensus 43 ~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~ 122 (467)
T COG2211 43 FGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLL 122 (467)
T ss_pred cCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHH
Confidence 4444444444333 346778899999986 77777654 454666665554 34442 33344567888
Q ss_pred hhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCC--CCCcchHHHHHH
Q 013645 122 GFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG--STSGTTLLFIVF 199 (439)
Q Consensus 122 Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~--~~~w~~~~~~~~ 199 (439)
+++.........+..++..+ +++||.+..++-..+.++|..+-..+...+....+.+ ..+|+.. -+++
T Consensus 123 ~l~YT~vniPy~al~~~iT~---------d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~-~~~~ 192 (467)
T COG2211 123 GLGYTLVNIPYGALGPEITQ---------DPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGT-ALVL 192 (467)
T ss_pred HHHHHheeCchhhcchhhcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHH-HHHH
Confidence 88888877777777777764 6789999999877777777555444433333322211 2344431 2223
Q ss_pred HHHHHHHHHHHH-hccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHH---hhcchh
Q 013645 200 LGVITLGTILMC-FLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW---AEFTKE 275 (439)
Q Consensus 200 ~~~~~l~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~---~~~~~~ 275 (439)
++++.+..+..+ -++|+..+.... ++..+.+.++ +....++||.+..+....++......... .+|.++
T Consensus 193 ~vi~~i~~l~~~~~v~ER~~~~~~~----~~~~~~~~~~---~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y 265 (467)
T COG2211 193 GVIGVILLLFCFFNVKERVVETQPT----KTGVKLKLKD---SFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTY 265 (467)
T ss_pred HHHHHHHHHHHHHHhhcccCccccC----cccccccHHH---HHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEE
Confidence 333333332222 245543311111 0001122222 23346788887776654333332222221 223322
Q ss_pred hhccccccc--chHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHH
Q 013645 276 IVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAA 353 (439)
Q Consensus 276 ~~~~~~~~~--~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (439)
.++.. ...........+.+++.++..++.+|+|+|+.. ..+.++.+++... +.+.+..+ ..+.++..+
T Consensus 266 ----~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~-~~~~~~~~i~~~~--~~f~~~~~---~~l~~~~~~ 335 (467)
T COG2211 266 ----VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLF-LIGLLLLAVGYLL--LYFTPAGS---VVLIVVALI 335 (467)
T ss_pred ----EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH-HHHHHHHHHHHHH--HHhhcCcc---hHHHHHHHH
Confidence 23322 234445566777777789999999999988744 5666666555432 22333222 356677778
Q ss_pred HHhhhhhhhhhhHHHHHHhhccCCc-------hh-hHHHHHHHHHHHHHH
Q 013645 354 LLGIGDGVLNTQLSALLGILFKHDT-------EG-AFAQLKVWQCASIAV 395 (439)
Q Consensus 354 l~G~~~~~~~~~~~a~~~~~~p~~~-------~~-a~s~~~~~~~~g~~i 395 (439)
+.+++.+..++..++.++|..+.++ ++ .+|.+.+.+=+|.++
T Consensus 336 i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~al 385 (467)
T COG2211 336 IAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLAL 385 (467)
T ss_pred HHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHH
Confidence 9999999999999999998875421 11 356655555444443
No 120
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.26 E-value=8.4e-09 Score=97.94 Aligned_cols=267 Identities=10% Similarity=0.028 Sum_probs=138.3
Q ss_pred cCccccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHHHHHHHHHH----HhhhhhHHHHHHHhchhHHHHHHh
Q 013645 21 LTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSF----TCFSLVASLVVRVLGSKNALILGT 96 (439)
Q Consensus 21 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~----~~~~~~~g~l~dr~G~r~~l~~g~ 96 (439)
++.++.+++++.+=... +...+ ...+..-.+.++.+...-..+.+|... ++...+.|.++||+|||+.-+...
T Consensus 30 ~~f~~Fqr~yl~vY~La--~~aDW-LQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~c 106 (354)
T PF05631_consen 30 PAFRRFQRKYLLVYLLA--MAADW-LQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFC 106 (354)
T ss_pred hHHHHHHHHHHHHHHHH--HHHHH-hhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 45566777766552221 11111 111111122233344433444444432 345567899999999999888888
Q ss_pred HHHHHHHHhhhcchhhHHHHHHHHhhhHHHHHHhhh-hhHHHHHhhhhhhhcCCCcccchhhhhHHHH-HHHHHhhhhhh
Q 013645 97 TGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGE-GTYLTAAALSHASNHKLHEGTVIGSFNGEFW-GMFASHQFVGN 174 (439)
Q Consensus 97 ~~~~~~~~~~~~~~~~~li~~r~i~Gig~g~~~~~~-~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~-~~~~~G~~iG~ 174 (439)
+.|.+..+....+++..+++.|++.|++.+.++++- .-++.|+. +. +. |++..+.-++... ..+.+-.+..+
T Consensus 107 ily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~-~~----g~-~~~~L~~tF~~~tf~~n~~vAI~aG 180 (354)
T PF05631_consen 107 ILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHN-KR----GF-PQEWLSDTFSLATFFGNGVVAIGAG 180 (354)
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hc----CC-ChHHHHHHHHHHHHHHhHHHHHHHh
Confidence 877776666667999999999999999999999884 44455543 21 11 3333333333221 11223334445
Q ss_pred HHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHh-ccCCCccccccccccchhhhhhHHHHHHHHHHhhccchhHH
Q 013645 175 LITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF-LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLL 253 (439)
Q Consensus 175 ~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (439)
+++-.+....+. + +..+|....++.+++.++... =+|+...+++. .+...+.++ ....+.+|||++.
T Consensus 181 v~a~~l~~~~~~---g-~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~-----~~~~~~~~~---a~~~i~~d~ril~ 248 (354)
T PF05631_consen 181 VVANVLADWFGF---G-PVAPFDAAIVLLAVAAVLILKTWPENYGDTSSS-----SSLSGSFRE---AWRAILSDPRILL 248 (354)
T ss_pred HHHHHHHHHhCC---C-CcchHHHHHHHHHHHHHHHHhcccccCCCcccc-----cchHHHHHH---HHHHHHcCchhHH
Confidence 555554432211 1 233455444444444333211 12321111100 001112222 2334567899988
Q ss_pred HHHHHHHhhHH-HHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcC
Q 013645 254 IIPLFAYSGLQ-QAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTG 310 (439)
Q Consensus 254 l~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~ 310 (439)
+.....+.... ..|+.-|-| .+...+ ..-..|.++..+.++.++|+.+..++..+
T Consensus 249 LG~~qslFE~smy~FVflWtP-aL~~~~-~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 249 LGLIQSLFEGSMYLFVFLWTP-ALDPDD-EELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HHHHHHHHHHHHHHheeeeec-eecCCC-CCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 76654333222 233322333 222111 11247889999999999999999776544
No 121
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.25 E-value=9.5e-10 Score=109.00 Aligned_cols=106 Identities=20% Similarity=0.112 Sum_probs=73.9
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhch-hHHHHHHhHHHHHHHHhh-----hcc-hhhHHHHHHHHhhhHHHHHHhhhhhHHH
Q 013645 65 LGILYTSFTCFSLVASLVVRVLGS-KNALILGTTGYWLFVAAN-----LFP-SWYTMVPASLYLGFAASIIWVGEGTYLT 137 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~g~l~dr~G~-r~~l~~g~~~~~~~~~~~-----~~~-~~~~li~~r~i~Gig~g~~~~~~~~~i~ 137 (439)
.+..-.+.+++++..|+...|.+. |+.++.|.+...+..+.+ ..+ .-+.++++|++.|+|.|..-. .=+|++
T Consensus 77 iaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~-lR~Y~a 155 (488)
T KOG2325|consen 77 IAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAV-LRAYIA 155 (488)
T ss_pred HHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHH-HHHHHH
Confidence 334444556677788889999886 888887776544433322 223 456777899999999776533 467787
Q ss_pred HHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhh
Q 013645 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (439)
Q Consensus 138 ~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~ 181 (439)
+.+ .+++|-|+++....+..+|.++||.+...+.
T Consensus 156 ~~s----------~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 156 DAS----------TVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred hcc----------CccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 776 5678888888877777788888887766543
No 122
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.24 E-value=2.7e-10 Score=120.41 Aligned_cols=130 Identities=12% Similarity=0.033 Sum_probs=101.8
Q ss_pred HHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCC
Q 013645 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (439)
Q Consensus 71 ~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~ 149 (439)
...++++++|+++||+|||++++.+.++.++..+. ...++...+++.+++.|++.+..|+...++++|+.
T Consensus 607 ~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~--------- 677 (742)
T TIGR01299 607 AVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY--------- 677 (742)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---------
Confidence 44567889999999999999999998877765544 34556666677788999988888998889999987
Q ss_pred CcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCC
Q 013645 150 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 217 (439)
Q Consensus 150 ~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~ 217 (439)
|.++||+++|+..+...+|.++||.+++.+.... ....+++++++.+++.++..++||+.
T Consensus 678 -Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~-------~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 -PSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT-------KAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 8899999999999999999999999887665421 23345566666666666667777754
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.19 E-value=8.3e-10 Score=110.63 Aligned_cols=139 Identities=16% Similarity=0.221 Sum_probs=100.2
Q ss_pred HHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-h-cc---hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhh
Q 013645 68 LYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L-FP---SWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (439)
Q Consensus 68 ~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~-~~---~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~ 142 (439)
......++.++.|++.||+|+|+++..+.++.++..... . .+ ++..+++.+++.|++.+...+....++++..
T Consensus 260 ~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~-- 337 (418)
T TIGR00889 260 SQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEV-- 337 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
Confidence 333445667889999999999999999998776643332 2 22 2455667899999999988888888888886
Q ss_pred hhhhcCCCcccchhhhhHHHH-HHHHHhhhhhhHHHHHhhcCCC-CCCCCcchHHHHHHHHHHHHHHHH-HHhccCCC
Q 013645 143 HASNHKLHEGTVIGSFNGEFW-GMFASHQFVGNLITLAVLKDDK-GGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEE 217 (439)
Q Consensus 143 ~a~~~~~~~~~~rg~~~g~~~-~~~~~G~~iG~~i~~~l~~~~~-~~~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~ 217 (439)
|+++||+++|+.. ...++|.++||.+++.+..+.+ .+..+|+.. |.+.+++.+++.++ .+++||+.
T Consensus 338 --------p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~-f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 338 --------PVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTM-WLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred --------CHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHH-HHHHHHHHHHHHHHHHHHhCCcc
Confidence 8899999999996 5678999999999988876432 111467764 44455555554444 45677653
No 124
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.18 E-value=9.4e-10 Score=91.54 Aligned_cols=124 Identities=17% Similarity=0.158 Sum_probs=95.7
Q ss_pred HHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCC
Q 013645 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (439)
Q Consensus 71 ~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~ 149 (439)
...+++++.|++.||+|||+.+..+.....+.... ...++.+.+.+.+++.|++.+..++...+++.|..
T Consensus 10 ~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------- 80 (141)
T TIGR00880 10 GQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY--------- 80 (141)
T ss_pred HHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC---------
Confidence 44567889999999999999999888766554443 34567777778899999999998888888888886
Q ss_pred CcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHH
Q 013645 150 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM 210 (439)
Q Consensus 150 ~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~ 210 (439)
|+++|++..++......+|..+|+.+...+... .+|+.. |.+...+.++..+..
T Consensus 81 -~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 81 -PPEERGVALGLMSAGIALGPLLGPPLGGVLAQF-----LGWRAP-FLFLAILALAAFILL 134 (141)
T ss_pred -ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc-----cchHHH-HHHHHHHHHHHHHHH
Confidence 788999999999999999999999988877643 246653 444445454444443
No 125
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.17 E-value=1.8e-09 Score=107.36 Aligned_cols=135 Identities=16% Similarity=0.099 Sum_probs=97.4
Q ss_pred HHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhh
Q 013645 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (439)
Q Consensus 66 ~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a 144 (439)
+.......++.++.|++.||+|+|+.+..+..+..+.... ...++...+++..++.|++.+..++.....+.+..
T Consensus 256 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~---- 331 (399)
T PRK05122 256 TLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRV---- 331 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC----
Confidence 3444455677889999999999999998887765554433 34566666777899999999988877666665554
Q ss_pred hhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCC
Q 013645 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (439)
Q Consensus 145 ~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~ 216 (439)
|+++||+++|++.....+|..+++.+.+.+.... +|+.. |....++.+++.+...+++++
T Consensus 332 ------~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-----g~~~~-~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 332 ------PPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF-----GYPSI-FLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CHHHH-HHHHHHHHHHHHHHHHHhccc
Confidence 7899999999999999999988888777765432 46553 444555555665555555543
No 126
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.14 E-value=2.2e-08 Score=100.40 Aligned_cols=298 Identities=16% Similarity=0.152 Sum_probs=173.2
Q ss_pred HhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhhhcchhhHHHHHHHHhhhHH--HHHHhhhhhHHHHHhhhhhhhcCCC
Q 013645 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAA--SIIWVGEGTYLTAAALSHASNHKLH 150 (439)
Q Consensus 73 ~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~~~~~~~~li~~r~i~Gig~--g~~~~~~~~~i~~~~~~~a~~~~~~ 150 (439)
.+.++..|.++||+|||..+........+-........|+.++ +.|+.. +..+....+|++|.+
T Consensus 76 ~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~~~~~----~~~l~g~~~~~~s~~~a~vadis---------- 141 (463)
T KOG2816|consen 76 LISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGYWFFL----LLGLSGGFSAIFSVGFAYVADIS---------- 141 (463)
T ss_pred HHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHhh----hcccccchhhhhhhhhhheeecc----------
Confidence 4577889999999999999999988766655544444455544 333332 344556777788776
Q ss_pred cccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHH-HHhccCCCcccccc-ccc--
Q 013645 151 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKE-TAD-- 226 (439)
Q Consensus 151 ~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~~~~~~~-~~~-- 226 (439)
.+++|....|+.......+.++||.++....+..+ . ...+.+-.+..+++.+. .+++||+.++++++ .+.
T Consensus 142 ~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~-----~-a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~ 215 (463)
T KOG2816|consen 142 SEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG-----I-ALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE 215 (463)
T ss_pred chhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC-----c-hHHHHHHHHHHHHHHHHHhhccccccCccccccccccc
Confidence 67899999999999999999999999988876432 1 23344445545455443 36788865543322 110
Q ss_pred cchh--hhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHh-hcchhhhc-ccccccchHHHHHHHHHHHHHHHH
Q 013645 227 ASVN--FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWA-EFTKEIVT-PALGVSGVGGAMAVYGAFDAICSL 302 (439)
Q Consensus 227 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~-~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~ 302 (439)
.+.. ......+.++...+.-.+|..+.+.+..++.-.....-.. ..+.+.+. .+.+.+..+...+..++...++..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l 295 (463)
T KOG2816|consen 216 LTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQL 295 (463)
T ss_pred cCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0111122223333322444555544443333322211001 11111111 245566677666666777777777
Q ss_pred hhh-hhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCC-chh
Q 013645 303 AAG-RLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEG 380 (439)
Q Consensus 303 ~~G-~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~-~~~ 380 (439)
+.. .+...++.|+ ++..|.........+ ..+..+. +.++...... .......|...+..+...+.+ ++.
T Consensus 296 ~~~~~l~~~l~~~~-~i~lGl~~~~~~~~~--~af~~~~-----w~~~~~~v~~-~~~~~~~pa~~s~~s~~v~~~e~g~ 366 (463)
T KOG2816|consen 296 LLLPLLSSILGEKR-LISLGLLSEFLQLLL--FAFATET-----WMMFAAGVVV-ALAGIVFPAIRAFASILVSPEEQGK 366 (463)
T ss_pred HHHHHHHHHHhhhh-HhhHHHHHHHHHHHH--HHHhccc-----hhhhHHHHHH-HhhcchhHHHHhHHHhhcccccccc
Confidence 665 6666677665 556777766655432 2333221 3333333333 334556778888888887655 466
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 013645 381 AFAQLKVWQCASIAVVFFI 399 (439)
Q Consensus 381 a~s~~~~~~~~g~~i~~~i 399 (439)
++++....+.++..+++.+
T Consensus 367 v~~~is~i~~l~~~~~~~~ 385 (463)
T KOG2816|consen 367 VFGIISGIEGLSGVVSPAL 385 (463)
T ss_pred hhhHHHHHHHHhhhhhHHH
Confidence 8899888888887766533
No 127
>PRK10054 putative transporter; Provisional
Probab=99.09 E-value=3.3e-09 Score=105.47 Aligned_cols=165 Identities=15% Similarity=0.095 Sum_probs=109.2
Q ss_pred hhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHH
Q 013645 250 RMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVV 328 (439)
Q Consensus 250 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~ 328 (439)
+++.+....++.........+.++.++.+ .+.+.+++|+..+.+.++.++++++.|+++||+++|+.+ ..+.++..++
T Consensus 8 ~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~-~~~~~~~~~~ 86 (395)
T PRK10054 8 STSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYM-LLAITAFASG 86 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH-HHHHHHHHHH
Confidence 34444444444444444444555555532 356677899999989999999999999999999988744 4556555544
Q ss_pred HHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhhh---h
Q 013645 329 FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI---S 404 (439)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~~---~ 404 (439)
.. ...+.++ +...+++..+.|.+.+...+..+++..|..|+++ +.+++..+...++|.++++.+.+.. +
T Consensus 87 ~~--~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g 159 (395)
T PRK10054 87 FI--AIPLVNN-----VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQS 159 (395)
T ss_pred HH--HHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 32 2334433 2344455566677777778888999999998765 4578888888888888877665543 4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013645 405 LQAMLIVMVVGICVALVG 422 (439)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~ 422 (439)
++..+++.++..+++.+.
T Consensus 160 ~~~~f~~~~~~~~i~~i~ 177 (395)
T PRK10054 160 INLPFWLAAICSAFPLVF 177 (395)
T ss_pred cCcHHHHHHHHHHHHHHH
Confidence 556666666655555443
No 128
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.09 E-value=1e-08 Score=101.85 Aligned_cols=129 Identities=12% Similarity=-0.010 Sum_probs=89.9
Q ss_pred HHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcC
Q 013645 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (439)
Q Consensus 70 ~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~ 148 (439)
....++.++.|+++||+|||+.+..+.....+.... ...++...+++.+++.+++.|...+....+..|..
T Consensus 263 ~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~-------- 334 (393)
T PRK15011 263 GLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLM-------- 334 (393)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------
Confidence 334456789999999999999887766543332222 23456666667888888888777666556666553
Q ss_pred CCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccC
Q 013645 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (439)
Q Consensus 149 ~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~ 215 (439)
| ++||++++++....++|..+|+.+++.+..+. +|+.. +.+..++.+++.+..+++||
T Consensus 335 --p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~-----g~~~~-~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 335 --P-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW-----NYHAV-FWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred --C-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhHHH-HHHHHHHHHHHHHHHHhhcC
Confidence 4 57999999998889999999999988876532 46653 44445555566665566654
No 129
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.07 E-value=8.2e-09 Score=102.86 Aligned_cols=133 Identities=17% Similarity=0.044 Sum_probs=91.0
Q ss_pred HHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhh
Q 013645 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (439)
Q Consensus 66 ~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a 144 (439)
+.......+++++.|++.||+|||+.+..+.+...+.... ...++...+.+..++.|++.+...+...+++.+..
T Consensus 262 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---- 337 (406)
T PRK11551 262 IAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFY---- 337 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHc----
Confidence 3344455678889999999999999988766554443332 23455555556678888887776676667777665
Q ss_pred hhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhc
Q 013645 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFL 213 (439)
Q Consensus 145 ~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l 213 (439)
|+++||+..|+......+|..+|+.+.+.+..+.. +|.. .+.....+.+++.+..+++
T Consensus 338 ------p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 338 ------PTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGR----STVG-VIGASIPVILVAALAALLL 395 (406)
T ss_pred ------chhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCC----chHH-HHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999888765421 2333 3434444444444444443
No 130
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.07 E-value=4.8e-08 Score=98.12 Aligned_cols=307 Identities=15% Similarity=0.125 Sum_probs=165.1
Q ss_pred hhhhHHHHHHHhc----hhHH-HHHHhHHHHHHHHh-hh----cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhh
Q 013645 75 FSLVASLVVRVLG----SKNA-LILGTTGYWLFVAA-NL----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (439)
Q Consensus 75 ~~~~~g~l~dr~G----~r~~-l~~g~~~~~~~~~~-~~----~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a 144 (439)
..++.|.++|-+- |||. ++++.++.++.... .. .++.....+.-++.-+|.+...++..+.++|..++.
T Consensus 40 ~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~- 118 (433)
T PF03092_consen 40 IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARRE- 118 (433)
T ss_pred HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcC-
Confidence 4578899999984 4554 45555544332222 11 234555555667788889999999999999998763
Q ss_pred hhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCcc-cccc
Q 013645 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK-GEKE 223 (439)
Q Consensus 145 ~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~-~~~~ 223 (439)
|++||...+..+....+|.++|..+++.+....+ ++.. |.+...+..+..+..+++.|++++ ++++
T Consensus 119 -------p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-----~~~~-f~i~~~~~~l~~~~~~~~~~e~~~~~~~~ 185 (433)
T PF03092_consen 119 -------PESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-----PQGV-FLISAALPLLMLIVALFLLEERKVRPADE 185 (433)
T ss_pred -------CchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-----CeEE-ehHHHHHHHHHHHHHHHhhhhccccccch
Confidence 4449999999999999999999988887765432 3442 344455555554444454443221 1111
Q ss_pred c---cccc-hhhhhhHHHHHHHHHHhhccchhHHHHH-HHHHhhHHHHHHHh-hcchhhhccc---ccccchHHHHHHHH
Q 013645 224 T---ADAS-VNFYSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWA-EFTKEIVTPA---LGVSGVGGAMAVYG 294 (439)
Q Consensus 224 ~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~~~~~~~~-~~~~~~~~~~---~~~~~~g~~~~~~~ 294 (439)
. .+++ .......++..++.++.+++|.++.... ..++.......-.+ .+...-...+ ++.+..+.+..+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~ 265 (433)
T PF03092_consen 186 VFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGS 265 (433)
T ss_pred hhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHH
Confidence 0 0110 1111225677778888888888876544 22222211111001 1110001112 33445666666777
Q ss_pred HHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHH-HHh--hccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHH
Q 013645 295 AFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW-ILI--NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG 371 (439)
Q Consensus 295 i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~ 371 (439)
++.++|..+..+.-.+..-|+.+ ....++..+..+. +.+ .|..+...-+.+..+.-.++..+......-....+++
T Consensus 266 ~~~l~g~~~y~~~~~~~~~R~~~-~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a 344 (433)
T PF03092_consen 266 IASLLGILLYRKYFSNWSWRRIF-VVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAA 344 (433)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHH
Confidence 77888888777665555555433 3333333221110 000 1110000000112223344444444444555667899
Q ss_pred hhccCCchh-hHHHHHHHHHHHHHHH
Q 013645 372 ILFKHDTEG-AFAQLKVWQCASIAVV 396 (439)
Q Consensus 372 ~~~p~~~~~-a~s~~~~~~~~g~~i~ 396 (439)
++.|+..|+ .||+.....++|..++
T Consensus 345 ~lcP~G~Egt~yall~s~~Nlg~~~s 370 (433)
T PF03092_consen 345 RLCPKGSEGTVYALLASFSNLGSSVS 370 (433)
T ss_pred HHCCCCchHHHHHHHHHHHHHHHHHH
Confidence 999988764 5776666666665544
No 131
>PRK12382 putative transporter; Provisional
Probab=99.05 E-value=9.5e-09 Score=101.94 Aligned_cols=128 Identities=13% Similarity=0.096 Sum_probs=95.2
Q ss_pred HHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhc
Q 013645 69 YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (439)
Q Consensus 69 ~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~ 147 (439)
.....+++++.|++.||+|+|+.+..+..+..+.... ...++....++..++.|++.+...+...+.+.+..
T Consensus 259 ~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~------- 331 (392)
T PRK12382 259 GGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRV------- 331 (392)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc-------
Confidence 3344567889999999999999998887766554433 24566666677889999999887777666666665
Q ss_pred CCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHh
Q 013645 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF 212 (439)
Q Consensus 148 ~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~ 212 (439)
|+++||+++|++.....+|..+|+.+.+.+..+. +|+.. |....++.+++.+..++
T Consensus 332 ---~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-----g~~~~-~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 332 ---PSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF-----GYPSV-FLAGAISAVLGIIVTIL 387 (392)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CchHH-HHHHHHHHHHHHHHHHh
Confidence 7899999999999999999999999888876542 46663 44555555555555443
No 132
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.01 E-value=7.9e-09 Score=100.77 Aligned_cols=143 Identities=15% Similarity=0.089 Sum_probs=99.3
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHH-HhhccCCCCccchHHHHHHHHHHhh
Q 013645 279 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVTSGVLGTLYPLIMAALLGI 357 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~G~ 357 (439)
.+.+.++.+.....+.++.++++++.|+++||+|||+.+ ..+.++..++.... .....++.+ ...+++..++.|+
T Consensus 29 ~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~ 104 (365)
T TIGR00900 29 GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVM-IGADLIRAVLVAVLPFVALLGGLN---IWQVYVLAGILAI 104 (365)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHH-HHHHHHHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHH
Confidence 345556788888999999999999999999999998754 44544443322211 111111112 3567778888999
Q ss_pred hhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHHHH
Q 013645 358 GDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGILF 425 (439)
Q Consensus 358 ~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~ 425 (439)
+.+...+..++++.|.+|++++ .+++..+....+|..+++.+... .++++.+++.++..+++.+..+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 105 AQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999987754 57888888888888877766543 35666666665555555444433
No 133
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.98 E-value=3e-08 Score=101.52 Aligned_cols=135 Identities=10% Similarity=0.046 Sum_probs=87.0
Q ss_pred HHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHH---hh-hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhh
Q 013645 69 YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA---AN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (439)
Q Consensus 69 ~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~---~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a 144 (439)
.....+++++.|+++||+|||+++..+.++..+... .. ..++...+++.+++.|++.+..+.....++.+.+
T Consensus 296 ~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~---- 371 (490)
T PRK10642 296 MIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMF---- 371 (490)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
Confidence 344556778899999999999999888764332221 11 2345666677889988887766666666777665
Q ss_pred hhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCc
Q 013645 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (439)
Q Consensus 145 ~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~ 218 (439)
|++.||+++|+.......+..++|.+...+.... .+|+...+ ...+..+++.+..+++||+++
T Consensus 372 ------p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~----~~~~~~~~-~~~~~~~i~~~~~~~~pes~~ 434 (490)
T PRK10642 372 ------PTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST----QNLMMPAY-YLMVVAVIGLITGVTMKETAN 434 (490)
T ss_pred ------CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCchHHHH-HHHHHHHHHHHHHHHhccccC
Confidence 8899999999755445555667777666654322 13554333 334444555555567788544
No 134
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.98 E-value=2.9e-08 Score=101.72 Aligned_cols=181 Identities=17% Similarity=0.216 Sum_probs=110.1
Q ss_pred hhccch-hHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcC-CCCcceehhhH
Q 013645 245 LLADVR-MLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGG 321 (439)
Q Consensus 245 ~~~~~~-~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~-~~~r~~~~~~g 321 (439)
.+++|+ ++......++.........++.+.++.+ .+++.++.+.+...+........++.|+++|| +|||+.+ ..+
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~-~~g 94 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI-MLG 94 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH-HHH
Confidence 456776 4444433333333222222333433321 23334444554444444444445688999999 5988744 566
Q ss_pred HHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-h--hhHHHHHHHHHHHHHHHHH
Q 013645 322 AIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-E--GAFAQLKVWQCASIAVVFF 398 (439)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~--~a~s~~~~~~~~g~~i~~~ 398 (439)
.++..++.. ...+.++. ...+++..++.|++.+...+...+++++.+|+++ + .+++.++...++|..+++.
T Consensus 95 ~~~~~ig~~--l~~~~~~~----~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~ 168 (500)
T PRK09584 95 AIVLAIGYA--LVAWSGHD----AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSML 168 (500)
T ss_pred HHHHHHHHH--HHHHhccc----HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHH
Confidence 666655533 22333222 2345566778899999888999999999998653 2 3678888888888888876
Q ss_pred Hhhh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013645 399 IGPY----ISLQAMLIVMVVGICVALVGILFLTIQVEK 432 (439)
Q Consensus 399 i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
+.++ .++++.+.+.++..+++.+.++...+.+++
T Consensus 169 i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~ 206 (500)
T PRK09584 169 ATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQ 206 (500)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhcc
Confidence 6653 467788888777667777666665544444
No 135
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.98 E-value=4.3e-08 Score=97.03 Aligned_cols=165 Identities=9% Similarity=0.024 Sum_probs=109.9
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHHHHHHHH----HHHhhhhhHHHHHHHhchhHHHHHHhHHHHHH
Q 013645 27 TRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYT----SFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (439)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~----~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~ 102 (439)
.++++.+.+..++...++.......+...+|.+.+....+.... ...+..++++++.||+|+|+.+.++.+...+.
T Consensus 204 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~ 283 (382)
T TIGR00902 204 NPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGR 283 (382)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHH
Confidence 34455555555555555443333333333333343333333333 33345567889999999999999998877665
Q ss_pred HHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHH-HHHHHhhhhhhHHHHHh
Q 013645 103 VAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFW-GMFASHQFVGNLITLAV 180 (439)
Q Consensus 103 ~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~-~~~~~G~~iG~~i~~~l 180 (439)
... ...++++.+++..+++|++.+..+++...++++. |+++|++..+++. ...++|.++|+.+++.+
T Consensus 284 ~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-----------~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l 352 (382)
T TIGR00902 284 WAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-----------PGSEIAKLQALYNALAMGGLIAIFTAFAGFI 352 (382)
T ss_pred HHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444 3578888888889999999999999977777643 6778899999875 46789999999999998
Q ss_pred hcCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 013645 181 LKDDKGGSTSGTTLLFIVFLGVITLGTIL 209 (439)
Q Consensus 181 ~~~~~~~~~~w~~~~~~~~~~~~~l~~~~ 209 (439)
.++. ++ ..|...+++.+++.++
T Consensus 353 ~~~~-----g~--~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 353 YPTL-----GA--GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHhc-----cH--HHHHHHHHHHHHHHHH
Confidence 7653 23 2355556666555444
No 136
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.97 E-value=1.4e-08 Score=100.16 Aligned_cols=154 Identities=15% Similarity=0.078 Sum_probs=105.7
Q ss_pred HHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCc
Q 013645 263 LQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGV 342 (439)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 342 (439)
.....+.+.+|....+.+.+.++.+.+...+.++..+++++.|++.||++||+.+ ..+.++..++.. ...+.++
T Consensus 19 ~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~-~~~~~~~~~~~~--~~~~~~~--- 92 (385)
T TIGR00710 19 LGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVL-LLGLFIFALSSL--GLALSNN--- 92 (385)
T ss_pred HHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH-HHHHHHHHHHHH--HHHHHcc---
Confidence 3333443445443333455667789888999999999999999999999988744 455555554432 2233332
Q ss_pred cchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHH
Q 013645 343 LGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGIC 417 (439)
Q Consensus 343 ~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~ 417 (439)
+...++..++.|++.+...+..++++.|.+|++++ .+++..+....+|..+++.+.+ ..+++..+++..+..+
T Consensus 93 --~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~ 170 (385)
T TIGR00710 93 --IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGI 170 (385)
T ss_pred --HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 35667778899999999999999999999987754 5778877777777777665554 3356666666666555
Q ss_pred HHHHHHH
Q 013645 418 VALVGIL 424 (439)
Q Consensus 418 ~~~~~~~ 424 (439)
+.++..+
T Consensus 171 ~~~~~~~ 177 (385)
T TIGR00710 171 LLSALIF 177 (385)
T ss_pred HHHHHHH
Confidence 5555443
No 137
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.97 E-value=1.5e-08 Score=103.13 Aligned_cols=153 Identities=10% Similarity=0.141 Sum_probs=108.7
Q ss_pred hhcchhhhc---ccccccchHHHHHHHHHHHHHHHHhhhhhhcC-CCCcceehhhHHHHHHHHHHHHHhhccCCCCccch
Q 013645 270 AEFTKEIVT---PALGVSGVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGT 345 (439)
Q Consensus 270 ~~~~~~~~~---~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~-~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 345 (439)
+.++.++.+ .+++.++.|.+...+.++..++++++|+++|| +|||+.+ ..+.++..++.. .+.+.++ +
T Consensus 31 ~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l-~~~~~~~~~g~~--~~~~~~~-----~ 102 (475)
T TIGR00924 31 GILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM-VLGGIVLMLGHF--MLAMSIY-----P 102 (475)
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH-HHHHHHHHHHHH--HHHhccc-----H
Confidence 344444433 24555678888899999999999999999999 7988744 566666665543 2334332 2
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhccCC----chhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHH
Q 013645 346 LYPLIMAALLGIGDGVLNTQLSALLGILFKHD----TEGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGIC 417 (439)
Q Consensus 346 ~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~----~~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~~~ 417 (439)
..+++...+.|++.+...+...+++++.+|++ ++.+++.++...++|.++++.+.+. .++++.+.+.++.++
T Consensus 103 ~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~ 182 (475)
T TIGR00924 103 DLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMV 182 (475)
T ss_pred hHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 44556677889999999999999999999864 2347888888888888888766654 367778777776666
Q ss_pred HHHHHHHHHHHHH
Q 013645 418 VALVGILFLTIQV 430 (439)
Q Consensus 418 ~~~~~~~~~~~~~ 430 (439)
++.+.++...+++
T Consensus 183 ~~~l~~~~~~~~~ 195 (475)
T TIGR00924 183 IGLLTFFAGRHML 195 (475)
T ss_pred HHHHHHHHccccc
Confidence 6666555544333
No 138
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.97 E-value=2e-08 Score=99.98 Aligned_cols=125 Identities=14% Similarity=0.090 Sum_probs=93.2
Q ss_pred HHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCC
Q 013645 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLH 150 (439)
Q Consensus 72 ~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~ 150 (439)
..++.+..|++.||+|||+.+..+.....+..+. ...++.+.+++.+++.|++.+...+...+.+.+..
T Consensus 271 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---------- 340 (408)
T PRK09874 271 ALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNS---------- 340 (408)
T ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhC----------
Confidence 3456677899999999999998887765544433 23466666777899999999988888777766554
Q ss_pred cccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHh
Q 013645 151 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF 212 (439)
Q Consensus 151 ~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~ 212 (439)
|+++||+.+|++....++|..+|+.+++.+.... +|+. .|.+.+++.+++.+...+
T Consensus 341 ~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~-----g~~~-~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 341 SNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY-----GFRA-VFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred CcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc-----chhH-HHHHHHHHHHHHHHHHHH
Confidence 7789999999999999999999999988876532 4655 355556666666555443
No 139
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.96 E-value=9e-09 Score=99.92 Aligned_cols=135 Identities=20% Similarity=0.222 Sum_probs=104.5
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhh
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
+.+.++.+.+...+.++..+++++.|+++||+|||+ ++..+.++.+++... . .+.++ ...+++..++.|++.
T Consensus 28 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~l~~~~~~~~~~~~~-~-~~~~~-----~~~~~~~~~l~g~~~ 99 (352)
T PF07690_consen 28 GLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR-VLIIGLLLFALGSLL-L-AFASN-----FWLLLIARFLLGIGS 99 (352)
T ss_dssp TTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH-HHHHHHHHHHHHHHH-H-HHHCC-----HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee-eEeehhhhhhhHHHH-h-hhhhh-----HHHHhhhcccccccc
Confidence 456678899999999999999999999999999887 556777776665221 2 23322 246778899999999
Q ss_pred hhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHHHHHHH
Q 013645 360 GVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVG 422 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~~----~~~~~~~~~~~~~~~~~~~ 422 (439)
+...+...+++.|.+|+++ +.+++..+...++|..+++.+.+.. ++++.+++.+++.+++++.
T Consensus 100 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 100 GFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhh
Confidence 9999999999999999855 4588988888888888887776543 5666777777777777664
No 140
>PRK03545 putative arabinose transporter; Provisional
Probab=98.95 E-value=2.2e-08 Score=99.38 Aligned_cols=144 Identities=13% Similarity=0.145 Sum_probs=103.3
Q ss_pred cchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHH
Q 013645 272 FTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 351 (439)
Q Consensus 272 ~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (439)
.|+...+.+.+.++.|.....+.++..+++++.|++.||+|||+.+ ..+.++..++.. ...+.++ +..+++.
T Consensus 32 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~-~~~~~~~~~~~~--~~~~~~~-----~~~l~~~ 103 (390)
T PRK03545 32 LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLL-IGLFVLFIASHV--LSALAWN-----FTVLLIS 103 (390)
T ss_pred hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHH--HHHHhcc-----HHHHHHH
Confidence 3433333356667889888899999999999999999999998744 456555554432 2234433 3566677
Q ss_pred HHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHHHHHH
Q 013645 352 AALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGI 423 (439)
Q Consensus 352 ~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~~~~~~~ 423 (439)
-++.|++.+...+...+++.+.+|++++ .+.|.+....++|..+++.+.. ..++++.+++.+++.++..+..
T Consensus 104 r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~ 180 (390)
T PRK03545 104 RIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLL 180 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Confidence 7888999988888999999999987654 5788888888888887765553 3467778877777666555443
No 141
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.95 E-value=6.5e-08 Score=95.01 Aligned_cols=126 Identities=10% Similarity=0.084 Sum_probs=89.4
Q ss_pred HhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCc
Q 013645 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHE 151 (439)
Q Consensus 73 ~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~ 151 (439)
..+.++.|++.||+|||+++..+.+...+.... ...++.+.+++.+++.|++.+...+....++.+..
T Consensus 249 ~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~----------- 317 (375)
T TIGR00899 249 IPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLM----------- 317 (375)
T ss_pred HHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------
Confidence 446678999999999999988877654443332 23456666667889999998887777666666653
Q ss_pred ccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccC
Q 013645 152 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (439)
Q Consensus 152 ~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~ 215 (439)
|+++++++|++....++|..+|+.+++.+.+.. +|+.. |....++.+++.+...++||
T Consensus 318 ~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-----g~~~~-~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 318 PGRAGAATTLYTNTGRVGWIIAGSVGGILAERW-----SYHAV-YWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cchhH-HHHHHHHHHHHHHHHheecC
Confidence 456789999999999999999999988876542 35553 44455555566555555543
No 142
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.94 E-value=4.2e-08 Score=94.85 Aligned_cols=127 Identities=20% Similarity=0.205 Sum_probs=98.5
Q ss_pred HHHHHHhhhhhHHHHHHHhchhH-HHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhh
Q 013645 68 LYTSFTCFSLVASLVVRVLGSKN-ALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (439)
Q Consensus 68 ~~~~~~~~~~~~g~l~dr~G~r~-~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~ 145 (439)
......++.++.+++.||+|||+ .+..+.....+.... ...+++..+++..++.|++.+..++...+++.+..
T Consensus 220 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----- 294 (352)
T cd06174 220 FGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELA----- 294 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhc-----
Confidence 33345567788999999999999 998888877665544 34566777778899999999999999888888886
Q ss_pred hcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHH
Q 013645 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM 210 (439)
Q Consensus 146 ~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~ 210 (439)
|+++|++.+|+.....++|..+++.+.+.+.+. .+|+.. +.+..++.+++.+..
T Consensus 295 -----~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~-----~~~~~~-~~~~~~~~~i~~i~~ 348 (352)
T cd06174 295 -----PPEARGTASGLFNTFGSLGGALGPLLAGLLLDT-----GGYGGV-FLILAALALLAALLL 348 (352)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCcchH-HHHHHHHHHHHHHHh
Confidence 789999999999999999999999998887643 246553 445555555555443
No 143
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.94 E-value=2.7e-08 Score=98.40 Aligned_cols=164 Identities=12% Similarity=0.024 Sum_probs=111.3
Q ss_pred hhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHH
Q 013645 250 RMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVF 329 (439)
Q Consensus 250 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~ 329 (439)
.++.+....+..+.......+.+|....+.+.+.++.|+....+.++.++++++.|++.||++||+. +..+.++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~ 82 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHI-LLFLVALCVIGN 82 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHH-HHHHHHHHHHHH
Confidence 4444444445555554444455554433334556678888899999999999999999999998874 456666665544
Q ss_pred HHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHh----hhhh
Q 013645 330 LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIG----PYIS 404 (439)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~----~~~~ 404 (439)
. +..+.++ +..+++..++.|++.+...+...+++.+.+|++++ .+.+.+.....+|..+++.+. ...+
T Consensus 83 ~--l~~~~~~-----~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g 155 (382)
T PRK10091 83 A--MFTLSSS-----YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS 155 (382)
T ss_pred H--HHHHhCc-----HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc
Confidence 3 3344433 35677788899999998888888899999987654 477877777777777665443 2346
Q ss_pred HHHHHHHHHHHHHHHHH
Q 013645 405 LQAMLIVMVVGICVALV 421 (439)
Q Consensus 405 ~~~~~~~~~~~~~~~~~ 421 (439)
+++.+.+.+++.++..+
T Consensus 156 wr~~f~~~~~~~~~~~~ 172 (382)
T PRK10091 156 WRYTFLLIAVFNIAVLA 172 (382)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77777766665554443
No 144
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.93 E-value=4e-08 Score=98.39 Aligned_cols=176 Identities=13% Similarity=-0.005 Sum_probs=109.2
Q ss_pred hhccchhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHH
Q 013645 245 LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIA 324 (439)
Q Consensus 245 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~ 324 (439)
..+++++..+....+...+.........|....+.+.+..+.|.....+.++..+++++.|+++||++||+.+ ..+.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l-~~~~~~ 91 (417)
T PRK10489 13 LKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLI-LLARGT 91 (417)
T ss_pred HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEE-EehHHH
Confidence 3356776655444333333333332233322222234455788888999999999999999999999988755 345544
Q ss_pred HHHHHHHHH-hhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh
Q 013645 325 QVVVFLWIL-INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY 402 (439)
Q Consensus 325 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~ 402 (439)
.++++..+. ..+..+++ +..+++..++.|++.+...+...+++.+..|+++ +++.+..+...++|..+++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~ 168 (417)
T PRK10489 92 CGLGFIGLALNAFLPEPS---LLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGL 168 (417)
T ss_pred HHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHH
Confidence 443322111 11212222 3456667778888888888888899999998765 456777777777777777766543
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHH
Q 013645 403 ----ISLQAMLIVMVVGICVALVGIL 424 (439)
Q Consensus 403 ----~~~~~~~~~~~~~~~~~~~~~~ 424 (439)
.++.+.+++.++..+++.+..+
T Consensus 169 l~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (417)
T PRK10489 169 LIAAGGVAWNYGLAAAGTFITLLPLL 194 (417)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 3456666665555555544443
No 145
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.92 E-value=2.7e-08 Score=97.38 Aligned_cols=123 Identities=12% Similarity=-0.057 Sum_probs=86.9
Q ss_pred HHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-hcch--hhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhh
Q 013645 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPS--WYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (439)
Q Consensus 66 ~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~~~~--~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~ 142 (439)
+.......+++++.|++.||+|||+.+..+.+...+..... ..++ ...++...++.|++.+..++...+++.|..
T Consensus 247 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~-- 324 (377)
T TIGR00890 247 SISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIF-- 324 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHh--
Confidence 33444556778899999999999999988877665544332 2332 223344567888888777766677777776
Q ss_pred hhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHH
Q 013645 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVIT 204 (439)
Q Consensus 143 ~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~ 204 (439)
|+++||++.|++.....+|..+|+.+.+.+..+. +|+.. |.+..++.+
T Consensus 325 --------~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-----g~~~~-f~~~~~~~~ 372 (377)
T TIGR00890 325 --------GPANSAANYGFLYTAKAVAGIFGGLIASHALTEI-----GFEYT-FIVTGAFAL 372 (377)
T ss_pred --------hhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh-----chhhH-HHHHHHHHH
Confidence 7889999999999999999999999888876532 46553 434444333
No 146
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.91 E-value=5e-08 Score=98.67 Aligned_cols=146 Identities=16% Similarity=0.195 Sum_probs=99.9
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCC-CCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhh
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 358 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~-~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 358 (439)
+++.++.+.+...+.+...++.+++|+++||+ |||+.+ ..+.++.+++.. .+...++. ....++...+..++
T Consensus 41 gls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i-liG~il~~lg~l--ll~~~~~~----~~~~~l~l~li~iG 113 (493)
T PRK15462 41 KYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV-MLGALLMAIGHV--VLGASEIH----PSFLYLSLAIIVCG 113 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH-HHHHHHHHHHHH--HHHHhhcc----hhHHHHHHHHHHHh
Confidence 45556677778888888899999999999999 988754 567766665532 22222221 12334444455566
Q ss_pred hhhhhhhHHHHHHhhccCC---chhhHHHHHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013645 359 DGVLNTQLSALLGILFKHD---TEGAFAQLKVWQCASIAVVFFIGPYI----SLQAMLIVMVVGICVALVGILFLTIQVE 431 (439)
Q Consensus 359 ~~~~~~~~~a~~~~~~p~~---~~~a~s~~~~~~~~g~~i~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
.+...+..+++++|.+|++ |.++++++....++|..+++.+.+.. +++..+.+.++.++++.+.++...++++
T Consensus 114 ~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~ 193 (493)
T PRK15462 114 YGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFT 193 (493)
T ss_pred cccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 6777788889999999875 33478877777778888887776543 6777787777777777776655444444
Q ss_pred h
Q 013645 432 K 432 (439)
Q Consensus 432 ~ 432 (439)
+
T Consensus 194 ~ 194 (493)
T PRK15462 194 H 194 (493)
T ss_pred c
Confidence 3
No 147
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.91 E-value=6.1e-08 Score=97.66 Aligned_cols=141 Identities=13% Similarity=0.092 Sum_probs=98.8
Q ss_pred cchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHH
Q 013645 272 FTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 351 (439)
Q Consensus 272 ~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (439)
.+....+.+.+.++.|.+...+.++.++++++.|++.||+++|+. +..+.++..++.. ...+.++ +..+++.
T Consensus 46 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~-~~~~~~~~~~~~~--~~~~~~~-----~~~l~~~ 117 (434)
T PRK11663 46 MPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYF-MGIGLIATGIINI--LFGFSSS-----LWAFALL 117 (434)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchh-HHHHHHHHHHHHH--HHHHHhH-----HHHHHHH
Confidence 343333345566678888889999999999999999999998874 4566666554432 2334332 2445566
Q ss_pred HHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHHH
Q 013645 352 AALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVAL 420 (439)
Q Consensus 352 ~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~~~~ 420 (439)
.++.|++.+...+...+++.+.+|+++ +.+.+.++...++|..+++.+.+ ..++++.+++.+++.++.+
T Consensus 118 ~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 118 WVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 677888888888888999999998764 55788888888888877765443 3467777776665544443
No 148
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.90 E-value=5.6e-08 Score=99.22 Aligned_cols=144 Identities=15% Similarity=0.174 Sum_probs=98.3
Q ss_pred ccccchHHHHHHHHHHHHHHHHhhhhhhcC-CCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhh
Q 013645 281 LGVSGVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 281 ~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~-~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
.+.+..+.+...+.....+..+++|+++|| +|||+.+ ..+.++..++.. .....++. ...+++..++.|++.
T Consensus 47 ~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~-~~g~~~~~~g~~--~~~~~~~~----~~ll~~~~~l~~ig~ 119 (489)
T PRK10207 47 FSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI-VLGAIVLAIGYF--MTGMSLLK----PDLIFIALGTIAVGN 119 (489)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH-HHHHHHHHHHHH--HHHHhccc----hhHHHHHHHHHHhcc
Confidence 334445555556666666777789999999 9998854 577777665543 22333332 133456777889999
Q ss_pred hhhhhhHHHHHHhhccCCc---hhhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013645 360 GVLNTQLSALLGILFKHDT---EGAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGILFLTIQVE 431 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~p~~~---~~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (439)
+...|...++++|.+|+++ +++++.+....++|.++++.+.+ ..++++.|++..+.++++.+.++...++++
T Consensus 120 g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~ 198 (489)
T PRK10207 120 GLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVK 198 (489)
T ss_pred ccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhc
Confidence 9999999999999998763 23688888888888877766554 457778887766666666666655544443
No 149
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.88 E-value=8.8e-08 Score=96.02 Aligned_cols=132 Identities=14% Similarity=0.102 Sum_probs=94.4
Q ss_pred HHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhh
Q 013645 68 LYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (439)
Q Consensus 68 ~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~ 146 (439)
......++.++.|++.||+|+|+.+..+.++.++.... ...++.+.+++.+++.|++.+...+....++.+..
T Consensus 271 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~------ 344 (420)
T PRK09528 271 QVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNF------ 344 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------
Confidence 33455678889999999999999998888877665444 34667777788899999998887777667777665
Q ss_pred cCCCcccchhhhhHH-HHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHH-HhccC
Q 013645 147 HKLHEGTVIGSFNGE-FWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRK 215 (439)
Q Consensus 147 ~~~~~~~~rg~~~g~-~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~-~~l~~ 215 (439)
|++.|+...+. +....++|.++|+.+.+.+.... ||+.. |....++.+++.++. .++++
T Consensus 345 ----~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~-----G~~~~-f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 345 ----DVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI-----GFQGT-YLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred ----CccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh-----CchHH-HHHHHHHHHHHHHHHHHHhcC
Confidence 77788877655 55667899999999888876532 47663 444455555444443 34444
No 150
>PRK03699 putative transporter; Provisional
Probab=98.87 E-value=9.7e-08 Score=94.89 Aligned_cols=173 Identities=13% Similarity=0.033 Sum_probs=104.7
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhhhHhhhc-cCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHH
Q 013645 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVN-TEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (439)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~-~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~ 100 (439)
..+.++.+.++.++....+.......|... ++.+.+.. ..+.......++.+..|++.||+++|+.+..+..+..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~ 282 (394)
T PRK03699 203 WGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLAL 282 (394)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHH
Confidence 344555555555555555444443334333 22233322 2344445667888999999999999999887766544
Q ss_pred HHHHhh-hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHH
Q 013645 101 LFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (439)
Q Consensus 101 ~~~~~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~ 179 (439)
+..... ..++...+.+..++.|++.+..++...++..+.. ++++++..|.......+|..+||.+.+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-----------~~~~~~~~g~~~~~~~~g~~i~p~~~G~ 351 (394)
T PRK03699 283 VLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT-----------KVASPKLVNFILTCGTIGTMLTFVVTSP 351 (394)
T ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------cCCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 432222 3455555555678888888777776555555442 3456777888888888999999999888
Q ss_pred hhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccC
Q 013645 180 VLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (439)
Q Consensus 180 l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~ 215 (439)
+.+.. +++..++ +..++.+++.+...++++
T Consensus 352 l~~~~-----g~~~~~~-~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 352 IVAHF-----GLQAALL-TANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHh-----Cchhhhh-hhHHHHHHHHHHHHHHHH
Confidence 76542 3555433 334444444443444443
No 151
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.87 E-value=7.4e-08 Score=95.80 Aligned_cols=141 Identities=16% Similarity=0.065 Sum_probs=101.3
Q ss_pred hcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHH
Q 013645 271 EFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLI 350 (439)
Q Consensus 271 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (439)
..|+...+.+.+.++.+.....+.++..+++++.|++.||+|||+. +..+.++.+++.. ...+.++ ++.+++
T Consensus 42 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~-~~~~~~~~~~~~~--~~~~~~~-----~~~l~~ 113 (394)
T PRK10213 42 LLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYV-VILFAVLLTLSCL--LVSFANS-----FSLLLI 113 (394)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHH-HHHHHHHHHHHHH--HHHHHCh-----HHHHHH
Confidence 3444333345666778888888999999999999999999998874 4566666655433 2234333 366778
Q ss_pred HHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHH
Q 013645 351 MAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVA 419 (439)
Q Consensus 351 ~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~~~ 419 (439)
+-++.|++.+...+...+++.|.+|++++ .+.+......++|..+++.+.+ ..++++.+++.+++.++.
T Consensus 114 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~ 187 (394)
T PRK10213 114 GRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLC 187 (394)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 88899999999999999999999987754 5778777777777777665554 346777777766544443
No 152
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.86 E-value=6.2e-08 Score=96.29 Aligned_cols=134 Identities=16% Similarity=0.084 Sum_probs=96.0
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhh
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
+.+.++.+.+.+.+.++..+++++.|++.||+|||+. +..+..+.+++.. ...+.++ +..+++.-++.|++.
T Consensus 40 ~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~-l~~~~~l~~~~~~--~~~~a~~-----~~~ll~~r~l~Gig~ 111 (393)
T PRK09705 40 GMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRS-VAISLLLIAVGAL--MRELYPQ-----SALLLSSALLGGVGI 111 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHH-HHHHHHHHHHHHH--HHHHCcc-----hHHHHHHHHHHHhHH
Confidence 4556678999999999999999999999999999874 4577777666543 3345544 355677888999999
Q ss_pred hhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHHHHHHHH
Q 013645 360 GVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI-----SLQAMLIVMVVGICVALV 421 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i~~~~-----~~~~~~~~~~~~~~~~~~ 421 (439)
+...+..++++.+.+|++++.+.+.+......|..++..+.+.. ++...+....+..++...
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~ 178 (393)
T PRK09705 112 GIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALF 178 (393)
T ss_pred HHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999986666677887777766766665555432 344444444333333333
No 153
>PRK10504 putative transporter; Provisional
Probab=98.86 E-value=5.4e-08 Score=99.05 Aligned_cols=167 Identities=12% Similarity=0.055 Sum_probs=111.1
Q ss_pred hhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHH
Q 013645 250 RMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVF 329 (439)
Q Consensus 250 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~ 329 (439)
+++.+....+...+......+.+|....+.+.+..+.+.+...+.++..++.++.|+++||++||+.+ ..+.++..++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~-~~~~~~~~~~~ 89 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF-FTAIVLFTLGS 89 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH-HHHHHHHHHHH
Confidence 34444444444444433344455554444455556677777888899999999999999999988744 45555554443
Q ss_pred HHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh----hhh
Q 013645 330 LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YIS 404 (439)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~----~~~ 404 (439)
. .....++ ...+++..++.|++.+...+...+.+.+.+|++++ .+++.++...++|..+++.+.+ ..+
T Consensus 90 ~--~~~~~~~-----~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g 162 (471)
T PRK10504 90 L--FCALSGT-----LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS 162 (471)
T ss_pred H--HHHHhCC-----HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc
Confidence 2 2233332 35566778899999999999999999999987754 5778888887788777765543 346
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 013645 405 LQAMLIVMVVGICVALVGIL 424 (439)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~ 424 (439)
+.+.+++......++.+...
T Consensus 163 w~~~f~~~~~~~~l~~~~~~ 182 (471)
T PRK10504 163 WHWIFLINIPVGIIGAIATL 182 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 67777776655555554443
No 154
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.85 E-value=4.5e-07 Score=81.99 Aligned_cols=328 Identities=13% Similarity=0.088 Sum_probs=166.2
Q ss_pred hhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhhhcchhhHHHHHHHHhhhHHHHHHhhhhh-HHHHHhhhhhhhcCCCcc
Q 013645 74 CFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGT-YLTAAALSHASNHKLHEG 152 (439)
Q Consensus 74 ~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~~~~~~~~li~~r~i~Gig~g~~~~~~~~-~i~~~~~~~a~~~~~~~~ 152 (439)
+...+.|-++||-|||+.-+.-.+.|.+..+.--.|++..+++.|++.|+..+.++.+--+ +++|+-
T Consensus 87 LFGtivgSLaDkqGRKracvtycitYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn------------ 154 (454)
T KOG4332|consen 87 LFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN------------ 154 (454)
T ss_pred HHHHHHHHHHhhhccccceeeehHHHHHHHHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh------------
Confidence 4455788999999999975555555555444445688999999999999999999988444 455443
Q ss_pred cchhhhhHHHHH--------HHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccC-CCcccccc
Q 013645 153 TVIGSFNGEFWG--------MFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK-EEDKGEKE 223 (439)
Q Consensus 153 ~~rg~~~g~~~~--------~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~-~~~~~~~~ 223 (439)
++|+.---+... .+.+=.++.++.+-.+....+- |- ...|- +..+.+++..+..+++ .+...+.
T Consensus 155 ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~sl---GP-VAPFd--AAacfLaigmAvil~~W~ENygdp- 227 (454)
T KOG4332|consen 155 EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSL---GP-VAPFD--AAACFLAIGMAVILSSWSENYGDP- 227 (454)
T ss_pred hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhcc---CC-CCchH--HHHHHHHHHHHHHHhhhhhccCCh-
Confidence 233322111111 1222233333333333222111 11 11222 2222233323334433 1111110
Q ss_pred ccccchhhhhhHHHHHHH-HHHhhccchhHHHHHHHH-HhhHHHHHHHhhcchhhhccccccc--chHHHHHHHHHHHHH
Q 013645 224 TADASVNFYSYLVSLSKS-ITTLLADVRMLLIIPLFA-YSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAI 299 (439)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~i~~~i 299 (439)
..++++..+++. ...+..|.|+.++.-..- +-|....|..-|-| .+. -+.+ .-|+++..+.+++++
T Consensus 228 ------s~~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTP-aLs---pn~e~iPhGfiFatFMlASmL 297 (454)
T KOG4332|consen 228 ------SENKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTP-ALS---PNDEEIPHGFIFATFMLASML 297 (454)
T ss_pred ------hhhHHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecc-cCC---CCcccCCchhHHHHHHHHHHH
Confidence 011222223332 223457777766543211 11111111111111 111 1122 357888888899999
Q ss_pred HHHhhhhhhcCCCCc-ceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc
Q 013645 300 CSLAAGRLTTGLPSI-TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT 378 (439)
Q Consensus 300 g~~~~G~l~d~~~~r-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~ 378 (439)
|+-+..|+..|-..| .....+..++..+.+.+-......+++.-.+..-++..+++-.+.+.++|.+.-+-.+..|++.
T Consensus 298 GSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea 377 (454)
T KOG4332|consen 298 GSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA 377 (454)
T ss_pred hhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH
Confidence 998888776554322 1222233333333222101111111111123455778888889999999999999999999876
Q ss_pred hh-hHHHHHHHHHHHHHHHHHH---hh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 379 EG-AFAQLKVWQCASIAVVFFI---GP-YISLQAMLIVMVVGICVALVGILFLTIQV 430 (439)
Q Consensus 379 ~~-a~s~~~~~~~~g~~i~~~i---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
++ ....++.-.++-.+++... +. -...+.++.++.+.++++.+....+..-.
T Consensus 378 rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~~~L~~v~ 434 (454)
T KOG4332|consen 378 RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQRRLMTVV 434 (454)
T ss_pred HhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHHHHHHHhh
Confidence 53 4455555445555544322 11 12455777777777777766665544433
No 155
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.85 E-value=9.9e-08 Score=95.36 Aligned_cols=145 Identities=12% Similarity=0.028 Sum_probs=102.3
Q ss_pred hHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHH
Q 013645 251 MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 330 (439)
Q Consensus 251 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~ 330 (439)
+..+...++..|+..+...+..|....+.+.+.++.|.+...+.++..+++++.|++.||+|+|+. +..+.++.+++..
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~-~~~g~~l~~~g~~ 83 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAG-ILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH-HHHHHHHHHHHHH
Confidence 444555666677666554444444333345666788999999999999999999999999998874 4567766665542
Q ss_pred HHHhhcc-CCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh
Q 013645 331 WILINYS-VTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP 401 (439)
Q Consensus 331 ~~~~~~~-~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~ 401 (439)
. .... ...+ +...++..++.|++.+..++..++++.+..|++++ +..+..+..+++|..+++.+.+
T Consensus 84 l--~~~~~~~~~---~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~ 151 (410)
T TIGR00885 84 L--FWPAAEIMN---YTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQ 151 (410)
T ss_pred H--HHHHHhhcc---HHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111 1112 35667788889999999999999999999887654 4677888888888877765543
No 156
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.84 E-value=8.4e-08 Score=95.60 Aligned_cols=136 Identities=13% Similarity=0.170 Sum_probs=98.4
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhh
Q 013645 279 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 358 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 358 (439)
.+.+...+|+......+...+.+++.|+++||+++|+. +..+..+.+++.. ...+.++ ++.+++..++.|++
T Consensus 41 ~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~-l~~~~~~~~~~~~--~~~~~~~-----~~~l~~~~~l~g~~ 112 (400)
T PRK11646 41 LGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPM-IVTGMLMRAAGFA--TMAIAHE-----PWLLWLSCILSGLG 112 (400)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHH-HHHHHHHHHHHHH--HHHHhcc-----HHHHHHHHHHHHHH
Confidence 35666788988888888889999999999999998874 4566666555443 2233322 35567778888999
Q ss_pred hhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHHHHHHHH
Q 013645 359 DGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI---SLQAMLIVMVVGICVALVG 422 (439)
Q Consensus 359 ~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~~---~~~~~~~~~~~~~~~~~~~ 422 (439)
.+...+...+++.+.+|+|+ +.+.|..+...++|..+++.+.+.. ++.+.+++.++..++.++.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 113 GTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 88888999999999998765 4588888888888888777665543 5556666665555554433
No 157
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.84 E-value=1.4e-07 Score=85.89 Aligned_cols=177 Identities=15% Similarity=0.176 Sum_probs=113.8
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhhhhHhhhccC-CCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHH
Q 013645 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTE-GNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (439)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~ 99 (439)
.++..++++.+.++++..+......+.+.+..+ .++... ..+.+|...++.+++.|.++||+|++..++.+....
T Consensus 261 ~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~ 340 (459)
T KOG4686|consen 261 TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACIL 340 (459)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHH
Confidence 356667777777777777766655555544332 333332 367788888889999999999999999998887654
Q ss_pred HHHHHhhhcchhhHHHHHHHHhhhHHHH----HHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhH
Q 013645 100 WLFVAANLFPSWYTMVPASLYLGFAASI----IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNL 175 (439)
Q Consensus 100 ~~~~~~~~~~~~~~li~~r~i~Gig~g~----~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~ 175 (439)
.+..=+..+-+...=+.+..+.|...+. .||+... .. ||++.|++.|......++|-++-+.
T Consensus 341 tl~~H~~l~Ft~lsPy~~m~~lGLsysllAcslWP~va~----~v----------pE~qLGTaygf~qsIqNLgla~i~I 406 (459)
T KOG4686|consen 341 TLLGHSGLFFTFLSPYTSMTFLGLSYSLLACSLWPCVAS----LV----------PEEQLGTAYGFIQSIQNLGLAFIPI 406 (459)
T ss_pred HHHHhhhHHhhhccHHHHHHHHhhhHHHHHHHHhhhhhh----hC----------CHHHhcchHHHHHHHHhhhhhHHhh
Confidence 4422221111111112345677776543 5666443 32 8899999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCC
Q 013645 176 ITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 217 (439)
Q Consensus 176 i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~ 217 (439)
+.+.+..+. +++.|-..+|++...++++.+.+.+.+.+++
T Consensus 407 iag~i~d~~--g~y~~le~ffl~~~~~aL~svgil~~~N~kq 446 (459)
T KOG4686|consen 407 IAGFIADGD--GSYDNLEAFFLIIGLMALTSVGILFYLNKKQ 446 (459)
T ss_pred hhheeecCC--CchhhHHHHHHHHHHHHHHHHHHHhheeccc
Confidence 988886543 3345555555554444444444444554443
No 158
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.83 E-value=1.6e-05 Score=77.77 Aligned_cols=294 Identities=17% Similarity=0.152 Sum_probs=169.4
Q ss_pred HHhhhhhHHHHHHHhchhHHHHHHhHHHHHH-HHhhhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCC
Q 013645 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLF-VAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLH 150 (439)
Q Consensus 72 ~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~-~~~~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~ 150 (439)
+...-++...+.|..+.|++++++.+...+. .+.-..++...+-+.-++-|++.+.. ++-.+|+=...
T Consensus 54 yl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~e-vay~sYiys~v---------- 122 (412)
T PF01770_consen 54 YLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAAE-VAYYSYIYSVV---------- 122 (412)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHH-HHHHHHheeec----------
Confidence 3445677889999999999999999876553 33345677777777888889887663 33344443332
Q ss_pred cccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCcc----ccc----
Q 013645 151 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK----GEK---- 222 (439)
Q Consensus 151 ~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~----~~~---- 222 (439)
|+++-.++.+...+....|-.+|.++|-.+.... ..+.+.+.++- .....+++++.+++|.+++. ++.
T Consensus 123 ~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~---~~sy~~L~~is-l~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~ 198 (412)
T PF01770_consen 123 DKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFG---GVSYFQLNYIS-LASVSLALLIALFLPMPKRSLFFHRKPPAEQ 198 (412)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHH-HHHHHHHHHHHHHcCCCCcccceeccCcccc
Confidence 6667778888888888888888888877665422 12334433433 33345666777888875431 100
Q ss_pred -------c----ccccc------hh-----hhhhHHHHHHHHHHhhccchhHH--HHHHHHHhhHHHH--HHHhhcchhh
Q 013645 223 -------E----TADAS------VN-----FYSYLVSLSKSITTLLADVRMLL--IIPLFAYSGLQQA--FVWAEFTKEI 276 (439)
Q Consensus 223 -------~----~~~~~------~~-----~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~g~~~~--~~~~~~~~~~ 276 (439)
+ ..+.+ +. .....+...++.++..++|+++. +.-.+-.+|..+. ++-..+. .+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~-~v 277 (412)
T PF01770_consen 199 DANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWD-TV 277 (412)
T ss_pred ccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHH-hc
Confidence 0 00000 00 01112233456667778888754 3334444555442 2211111 11
Q ss_pred hcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHH--HHHHHHHHHHhhccCCCCccchHHHHHHHHH
Q 013645 277 VTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAI--AQVVVFLWILINYSVTSGVLGTLYPLIMAAL 354 (439)
Q Consensus 277 ~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 354 (439)
..++-.....|.+-++..+...++++..|.+..+..+...+ ..+.. +.+.++ .++.+.++ .++.+++.++
T Consensus 278 ~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l-~l~~~S~l~a~~L--~lm~~t~~-----Iwv~Y~~yIi 349 (412)
T PF01770_consen 278 PPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGEL-ALGVFSLLQAGLL--FLMSFTGN-----IWVCYAGYII 349 (412)
T ss_pred CCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHH-HHHHHHHHHHHHH--HHHHHhhH-----HHHHHHHHHH
Confidence 11112223467777777777888888899985554432222 22222 222222 23455533 4678889999
Q ss_pred HhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHH
Q 013645 355 LGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQ 389 (439)
Q Consensus 355 ~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~ 389 (439)
++..+....+....-++....+|+ +-+||+..+..
T Consensus 350 f~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~A 385 (412)
T PF01770_consen 350 FRSLYMFLITIASFQIAKNLSEERYALVFGINTFVA 385 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHH
Confidence 888877777776666666665444 33577666643
No 159
>TIGR00898 2A0119 cation transport protein.
Probab=98.83 E-value=1.1e-07 Score=97.73 Aligned_cols=129 Identities=14% Similarity=0.095 Sum_probs=90.1
Q ss_pred HHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-hcch--hhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcC
Q 013645 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPS--WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (439)
Q Consensus 72 ~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~~~~--~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~ 148 (439)
...+.++.+++.||+|||+++.++.++.++..+.. ..++ ....++.-++.+++.+..++....+.+|..
T Consensus 368 ~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-------- 439 (505)
T TIGR00898 368 ELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELY-------- 439 (505)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc--------
Confidence 34567789999999999999999887665544432 2332 233344456667777777777777777776
Q ss_pred CCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCc
Q 013645 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (439)
Q Consensus 149 ~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~ 218 (439)
|++.|++++|+......+|.++||.+.. +... ++ ...+.+++++.+++.+..+++||++.
T Consensus 440 --p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~------~~-~~~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 440 --PTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK------WL-FLPLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred --cHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH------HH-hhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 8889999999999999999999998876 3221 12 22355566666666666677887654
No 160
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.82 E-value=1.4e-07 Score=93.63 Aligned_cols=147 Identities=18% Similarity=0.126 Sum_probs=99.8
Q ss_pred HHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHH
Q 013645 268 VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLY 347 (439)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (439)
+...+|....+.+.+.++.+.....+.++..++.++.|+++||+|||+. +..+.++..++.. ...+.++ ...
T Consensus 22 ~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~-l~~~~~~~~i~~~--~~~~~~~-----~~~ 93 (392)
T PRK10473 22 YLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPV-AIPGAALFIIASL--LCSLAET-----SSL 93 (392)
T ss_pred HhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHH-HHHHHHHHHHHHH--HHHHhCc-----HHH
Confidence 3344554333334555667888888999999999999999999998874 4566655555433 2233333 245
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHHHHH
Q 013645 348 PLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVG 422 (439)
Q Consensus 348 ~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~~~~~~ 422 (439)
.++..++.|++.+...+..++++.+.+|++++ .+.+..+....++..+++.+.. ..++.+.+++.+++.++..+.
T Consensus 94 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~ 173 (392)
T PRK10473 94 FLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLL 173 (392)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHH
Confidence 66677888999888888899999999987654 5778777777777666665543 335666666666655554444
No 161
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.82 E-value=3e-07 Score=93.11 Aligned_cols=176 Identities=14% Similarity=0.135 Sum_probs=124.4
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhhhhHhhhcc-CCCCchHHHHH----HHHHHHhhhhhHHHHHHHhchh--HHHHHHhH
Q 013645 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNT-EGNLGTISLGI----LYTSFTCFSLVASLVVRVLGSK--NALILGTT 97 (439)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~g~~~~~~----~~~~~~~~~~~~g~l~dr~G~r--~~l~~g~~ 97 (439)
|..|+....-++.+++-.+.++...+...... +.+.+...+.. ...+-.+++++.|++.||+|.| +++..+..
T Consensus 278 ~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 278 RKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLI 357 (477)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 35678888888888887777766655444433 33444332222 2223456888999999999999 89988888
Q ss_pred HHHHHHH-hhh--------cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHH
Q 013645 98 GYWLFVA-ANL--------FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS 168 (439)
Q Consensus 98 ~~~~~~~-~~~--------~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~ 168 (439)
.+.+..+ +.+ .++-+.+.+..++.|+..|..++..-++.++.. |+++.++.+|++......
T Consensus 358 ~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~Li----------P~g~e~efFgly~i~gk~ 427 (477)
T PF11700_consen 358 LWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLI----------PPGREAEFFGLYAITGKA 427 (477)
T ss_pred HHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhC----------CCchhhHHHHHHHHHHHH
Confidence 7744333 223 355666777889999999999999999999987 889999999999999999
Q ss_pred hhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccC
Q 013645 169 HQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (439)
Q Consensus 169 G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~ 215 (439)
+..+||++-+.+.+..+ +-|.. +....++.+++.++..+++.
T Consensus 428 ss~lGPll~g~i~~~tg----~~r~g-~~~l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 428 SSWLGPLLFGLITDATG----SQRYG-FLFLLVLFLIGLILLFFVDV 469 (477)
T ss_pred HHHHHHHHHHHHHHHhC----CchhH-HHHHHHHHHHHHHHHhhccc
Confidence 99999998777765442 12332 33344555566665556654
No 162
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.82 E-value=7.2e-08 Score=94.97 Aligned_cols=146 Identities=14% Similarity=0.164 Sum_probs=102.8
Q ss_pred hhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHH
Q 013645 270 AEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPL 349 (439)
Q Consensus 270 ~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (439)
+.+|....+.+.+.++.+.....+.++.++++++.|++.||++||+. +..+.++..++.. ...+.++ +...+
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-~~~~~~~~~i~~~--~~~~~~~-----~~~~~ 83 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPV-ILGGTLVFALAAV--ACALAQT-----IDQLI 83 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHH-HHHHHHHHHHHHH--HHHHHcc-----HHHHH
Confidence 44444433345666778888889999999999999999999998864 4566665554432 2233322 35567
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHH
Q 013645 350 IMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGI 423 (439)
Q Consensus 350 ~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~~~~~~~~~ 423 (439)
+..++.|++.+...+...+++.+.+|+++ +.+.+..+....+|..+++.+.+. .++++.+++.+++.++..+..
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 77888999999999999999999998775 457788777777777777655543 356666766666655554443
No 163
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.82 E-value=9.3e-08 Score=95.06 Aligned_cols=143 Identities=13% Similarity=0.061 Sum_probs=94.2
Q ss_pred chhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHH
Q 013645 249 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVV 328 (439)
Q Consensus 249 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~ 328 (439)
|+++.+....+...+.........+....+.+.+....+.+...+.+...+..++.|++.||++||+.+ ..+.++.+++
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl-~~~~~~~~~~ 81 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVM-FIANGIKLLG 81 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhh-HHHHHHHHHH
Confidence 445554444444444332221222222222333445678888889999999999999999999998854 4566555443
Q ss_pred HHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhhh
Q 013645 329 FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPY 402 (439)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~~ 402 (439)
.. ...+.++ . ++..++.|++.+...|...+++.|.+|++++ ++.|......++|..+++.+++.
T Consensus 82 ~~--~~~~~~~------~--~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~ 146 (393)
T PRK11195 82 CL--LMLFGIH------P--LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGA 146 (393)
T ss_pred HH--HHHHHHH------H--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 1122211 1 3455678999999999999999999998764 58888888888888888777654
No 164
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.82 E-value=7e-08 Score=95.42 Aligned_cols=147 Identities=12% Similarity=-0.027 Sum_probs=104.0
Q ss_pred chhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHH
Q 013645 249 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVV 328 (439)
Q Consensus 249 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~ 328 (439)
|.++.+....+..+...+...+.+|....+.+.+.++.|.+...+.++..+++++.|+++||+|||+.+ ..+.++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~-~~~~~~~~~~ 84 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSY-YLASLIFAAG 84 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 345555554455555555555556655544556667899999999999999999999999999988744 4566655544
Q ss_pred HHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhhh
Q 013645 329 FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 403 (439)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~~ 403 (439)
.. ...+.++ +..+++..++.|++.+...+...+.+.+..|+++ +.+.+.++...++|..+++.+.+..
T Consensus 85 ~~--~~~~~~~-----~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 85 CA--GLGLMVG-----FWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred HH--HHHHhcc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 32 2334433 3566778889999998888888777777776654 4578888888888888887776543
No 165
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.80 E-value=7.1e-10 Score=113.66 Aligned_cols=252 Identities=17% Similarity=0.117 Sum_probs=3.0
Q ss_pred HhhhccCCCCchHHHHHHHHHHHhhh----hhHHHHHHHhchhHHHHHHhHHHHHHHHhhhcc-----------------
Q 013645 51 ETTVNTEGNLGTISLGILYTSFTCFS----LVASLVVRVLGSKNALILGTTGYWLFVAANLFP----------------- 109 (439)
Q Consensus 51 ~~~l~~~~~~g~~~~~~~~~~~~~~~----~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~~~~----------------- 109 (439)
.+++.+..++.....+++..++=+++ ++..++.+|..|-|.+..|.++.++..+.+..|
T Consensus 26 lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~ 105 (539)
T PF03137_consen 26 LTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNG 105 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccc
Confidence 34555556666666666666665544 455666666555566666665544432211100
Q ss_pred ----------------------------------hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccch
Q 013645 110 ----------------------------------SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVI 155 (439)
Q Consensus 110 ----------------------------------~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~r 155 (439)
-+..++++.++.|+|.++.|+...+|+-|+. ++++-
T Consensus 106 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv----------~~~~s 175 (539)
T PF03137_consen 106 NSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNV----------SKKNS 175 (539)
T ss_dssp ----------------------------------------------SSS-------------------------------
T ss_pred ccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccc----------ccccC
Confidence 0457788999999999999999999999998 77889
Q ss_pred hhhhHHHHHHHHHhhhhhhHHHHHhhcCCC----------------CCCCCcchHHHHHHHHHHHHHHHHHHhccCCCcc
Q 013645 156 GSFNGEFWGMFASHQFVGNLITLAVLKDDK----------------GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK 219 (439)
Q Consensus 156 g~~~g~~~~~~~~G~~iG~~i~~~l~~~~~----------------~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 219 (439)
+...|++.+...+|+++|-++++...+... ..+.|-+|+-|++.+.+.++..+..+++|+.-++
T Consensus 176 plYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~ 255 (539)
T PF03137_consen 176 PLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPG 255 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 999999999999999999888876654210 0112312444555555555544444555542111
Q ss_pred c-----cccc---c-----ccchhh-------hhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhcc
Q 013645 220 G-----EKET---A-----DASVNF-------YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP 279 (439)
Q Consensus 220 ~-----~~~~---~-----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~ 279 (439)
. +++. + +++..+ ....++..+..+++++||-+.........-.....-+.+..|+++.++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~Q 335 (539)
T PF03137_consen 256 TSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQ 335 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 0000 0 000000 112344445677788888887665432222211111223455655332
Q ss_pred -cccccchHHHHH-HHHHHHHHHHHhhhhhhcCCC
Q 013645 280 -ALGVSGVGGAMA-VYGAFDAICSLAAGRLTTGLP 312 (439)
Q Consensus 280 -~~~~~~~g~~~~-~~~i~~~ig~~~~G~l~d~~~ 312 (439)
+++.+...++.. +.-.+.++|.+++|.+.+|++
T Consensus 336 F~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~k 370 (539)
T PF03137_consen 336 FGLSASQASLLTGIVSIPGAALGILLGGYIVKKFK 370 (539)
T ss_dssp -----------------------------------
T ss_pred hCCCHHHHHHHHhhhhcchhheehheEEEEEEEec
Confidence 344444444432 333366788888999888875
No 166
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.79 E-value=2.9e-07 Score=91.80 Aligned_cols=169 Identities=14% Similarity=0.116 Sum_probs=99.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHHhchhHHHH-HHhHHHHHH
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALI-LGTTGYWLF 102 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr~G~r~~l~-~g~~~~~~~ 102 (439)
++++...+..++....+.......|...++.+.+... .+.......++++..|+++||+|||+.+. .+.+...+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~ 301 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIF 301 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Confidence 3444444444444444433333334333333332221 23334456778899999999999998764 232222221
Q ss_pred HHh-h-----hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHH
Q 013645 103 VAA-N-----LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI 176 (439)
Q Consensus 103 ~~~-~-----~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i 176 (439)
... . ..++....++..++.|++.+...+. .+.+.+. +|++||+++|+.....++|..+||.+
T Consensus 302 ~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~-----------~~~~~g~~~g~~~~~~~lg~~~gp~i 369 (402)
T TIGR00897 302 TLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTL-----------APKHKGAAMSVLNLSAGLSAFLAPAI 369 (402)
T ss_pred HHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhh-----------CcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1 1235555666788889888765443 3334333 45689999999999999999999998
Q ss_pred HHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhcc
Q 013645 177 TLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (439)
Q Consensus 177 ~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~ 214 (439)
++.+.... +|+.. +++..++.+++.++..|+|
T Consensus 370 ~g~l~~~~-----g~~~~-~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 370 AVLFIGFF-----GAIGV-VWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred HHHHHhhc-----chHHH-HHHHHHHHHHHHHHHHHhc
Confidence 88876542 35553 4455666666666666654
No 167
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.79 E-value=9.7e-08 Score=95.52 Aligned_cols=134 Identities=13% Similarity=0.139 Sum_probs=98.9
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhh
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
+.+.++.|.....+.++..+++++.|++.||+|||+. +..+.++..++.. ...+.++ +..+++.-++.|++.
T Consensus 39 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~-~~~~~~~~~~~~~--~~~~~~~-----~~~l~~~r~l~G~~~ 110 (412)
T TIGR02332 39 GLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRW-IAGIMVLWGIAST--ATMFATG-----PESLYLLRILVGIAE 110 (412)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHH-HHHHHHHHHHHHH--HHHHhcC-----HHHHHHHHHHHHHHH
Confidence 4556678998899999999999999999999998874 4456655554432 2334433 356677888999999
Q ss_pred hhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh----------hhHHHHHHHHHHHHHHHHH
Q 013645 360 GVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----------ISLQAMLIVMVVGICVALV 421 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~----------~~~~~~~~~~~~~~~~~~~ 421 (439)
+...+...+++.+.+|+++ +.+.+.++....+|..+++.+... .++++.+++.++..++.++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~ 183 (412)
T TIGR02332 111 AGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGV 183 (412)
T ss_pred hhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHH
Confidence 9999988899999999764 557888888888887777655432 3677778776665554433
No 168
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.79 E-value=1.9e-07 Score=93.44 Aligned_cols=136 Identities=14% Similarity=0.119 Sum_probs=96.1
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhh
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
+.+.+..+.....+.++.++++++.|+++||+|||+. +..+.++..++.. ...+.++ +..+++.-++.|++.
T Consensus 47 ~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~-l~~~~~~~~~~~~--~~~~a~~-----~~~l~~~r~l~Gi~~ 118 (413)
T PRK15403 47 NADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPV-LITGALIFTLACA--ATLFTTS-----MTQFLIARFIQGTSI 118 (413)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHH-HHHHHHHHHHHHH--HHHHcCC-----HHHHHHHHHHHHHHH
Confidence 3444566777778889999999999999999999874 4456665554432 2334433 356677788889888
Q ss_pred hhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHHHHHH
Q 013645 360 GVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGI 423 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~~~~~~~ 423 (439)
+...+..++++.|.+|++++ ++.+.++....+|..+++.++. ..++++.+++.++..+++.+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~ 187 (413)
T PRK15403 119 CFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGL 187 (413)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 77677777889999987754 4678777777777777766554 3467778877777666665543
No 169
>TIGR00895 2A0115 benzoate transport.
Probab=98.78 E-value=1.3e-07 Score=93.38 Aligned_cols=105 Identities=12% Similarity=0.005 Sum_probs=76.8
Q ss_pred HHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhh
Q 013645 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (439)
Q Consensus 66 ~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a 144 (439)
+.......++.++.|++.||+|+|+.+....+......... ..++....++..++.|++.+...+...+++.+..
T Consensus 292 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---- 367 (398)
T TIGR00895 292 ALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFY---- 367 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----
Confidence 34444556788899999999999955444333222222222 2345555566788999999988888888888776
Q ss_pred hhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHh
Q 013645 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (439)
Q Consensus 145 ~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l 180 (439)
|+++||+++|+......+|..+||.+++.+
T Consensus 368 ------~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 368 ------PTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 889999999999999999999999887654
No 170
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.77 E-value=1.9e-07 Score=92.48 Aligned_cols=132 Identities=11% Similarity=0.005 Sum_probs=94.3
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhh
Q 013645 279 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 358 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 358 (439)
.+.+.++.+.....+.++..+++++.|+++||+|||+.+ ..+.++.+++.. ...+.++ +..+++..++.|++
T Consensus 42 ~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~-~~~~~~~~~~~~--~~~~~~~-----~~~l~~~~~l~G~~ 113 (405)
T TIGR00891 42 FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPM-VTSIVLFSAGTL--ACGFAPG-----YITMFIARLVIGIG 113 (405)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHHHHHHHHHH--HHHHhcc-----HHHHHHHHHHHHhh
Confidence 355667788888899999999999999999999998754 455555544432 2233332 35677788999999
Q ss_pred hhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh----hh--HHHHHHHHHHHHHH
Q 013645 359 DGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----IS--LQAMLIVMVVGICV 418 (439)
Q Consensus 359 ~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~----~~--~~~~~~~~~~~~~~ 418 (439)
.+...+...+++.|.+|+++ +.+.+.++....+|..+++.+... .+ +.+.+++.++..++
T Consensus 114 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~ 180 (405)
T TIGR00891 114 MGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIF 180 (405)
T ss_pred hhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence 99999999999999998765 457888888888887777655432 22 55555544433333
No 171
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.76 E-value=1.1e-07 Score=96.89 Aligned_cols=137 Identities=16% Similarity=0.092 Sum_probs=99.7
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhh
Q 013645 279 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 358 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 358 (439)
.+.+.++.+++...+.++.+++.++.|+++||+|||+.+ ..+.++..++.. .....++ +..+++.-++.|++
T Consensus 32 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~-~~~~~~~~~~~~--~~~~~~~-----~~~l~~~~~~~G~~ 103 (485)
T TIGR00711 32 LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLF-LISTFAFTLGSL--LCGVAPN-----LELMIIFRVIQGFG 103 (485)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHH-HHHHHHHHHHHH--HHhCcCC-----HHHHHHHHHHHHhh
Confidence 345556788888999999999999999999999988744 466666555432 2334333 35667788899999
Q ss_pred hhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHH
Q 013645 359 DGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGI 423 (439)
Q Consensus 359 ~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~~~~~~~~~ 423 (439)
.+...+..++++.|.+|+++ +.+.+.+.....+|..+++.+.+. .++++.+++.+.+.++..+..
T Consensus 104 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~ 173 (485)
T TIGR00711 104 GGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVA 173 (485)
T ss_pred hhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHH
Confidence 99999999999999998765 457888888888887777655543 356666766665555444443
No 172
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.76 E-value=2.5e-07 Score=92.19 Aligned_cols=160 Identities=11% Similarity=-0.028 Sum_probs=107.8
Q ss_pred HHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCC-----CCcceehhhHHHHHHHHHHH
Q 013645 257 LFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL-----PSITFIVSGGAIAQVVVFLW 331 (439)
Q Consensus 257 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~-----~~r~~~~~~g~~~~~~~~~~ 331 (439)
+.+.+|+..++.....|.++++++++.+++|.+..+... .+..+++|++.||+ |||+.++..+.++.++++..
T Consensus 7 l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~ 84 (402)
T PRK11902 7 LGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAA 84 (402)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHH
Confidence 345567777777777887788888888999987655444 58889999999999 77766666666666554432
Q ss_pred HHhhcc-CCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHh----h-hhh
Q 013645 332 ILINYS-VTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIG----P-YIS 404 (439)
Q Consensus 332 ~~~~~~-~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~----~-~~~ 404 (439)
+ .+. ++.+ .+.+++..++.+++.+...+...+++.+..|++++ .+.++......+|..++..+. . ..+
T Consensus 85 l--~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~g 159 (402)
T PRK11902 85 M--AFCPPHAA---LWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLG 159 (402)
T ss_pred H--HhcCccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccC
Confidence 2 232 2222 24455566667888888888999999999988754 466666666666665554322 2 236
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 013645 405 LQAMLIVMVVGICVALVGI 423 (439)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~ 423 (439)
+...+++.+++.++.....
T Consensus 160 w~~~f~i~a~~~l~~~l~~ 178 (402)
T PRK11902 160 WGNTYLLMAGLMLAGALTT 178 (402)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7777777777665554443
No 173
>PRK10133 L-fucose transporter; Provisional
Probab=98.76 E-value=4.5e-07 Score=91.45 Aligned_cols=140 Identities=12% Similarity=0.040 Sum_probs=96.0
Q ss_pred HHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHH-
Q 013645 255 IPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL- 333 (439)
Q Consensus 255 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~- 333 (439)
..+++..++.........|..-.+.+.+.++.|.....+.++..+++++.|++.||+|+|+. +..+.++.+++.....
T Consensus 32 ~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~-l~~g~~~~~~~~~l~~~ 110 (438)
T PRK10133 32 CSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAG-IITGLFLYALGAALFWP 110 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-HHHHHHHHHHHHHHHHH
Confidence 33444445443222223333222235566778999999999999999999999999999874 4567776665542111
Q ss_pred hhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHHh
Q 013645 334 INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIG 400 (439)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~-a~s~~~~~~~~g~~i~~~i~ 400 (439)
....++ +..++++.++.|++.+...+..++++.+..|++++. ..+.++....+|..+++.+.
T Consensus 111 ~~~a~~-----~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 111 AAEIMN-----YTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222 466778889999999999999999999877666554 46788888888888877654
No 174
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.75 E-value=6.5e-07 Score=88.56 Aligned_cols=102 Identities=6% Similarity=0.009 Sum_probs=77.4
Q ss_pred HHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCC
Q 013645 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (439)
Q Consensus 71 ~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~ 149 (439)
...+..++.|++.||+|+|+.+..+....++.... ...++.+.+++..++.|++.+..++....++.+.
T Consensus 252 ~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~---------- 321 (382)
T PRK11128 252 AEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR---------- 321 (382)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------
Confidence 33445677899999999999999888776664433 3457777777889999999998877766666543
Q ss_pred CcccchhhhhHHHH-HHHHHhhhhhhHHHHHhhcC
Q 013645 150 HEGTVIGSFNGEFW-GMFASHQFVGNLITLAVLKD 183 (439)
Q Consensus 150 ~~~~~rg~~~g~~~-~~~~~G~~iG~~i~~~l~~~ 183 (439)
+++++++..+++. .....|..+|+.+++.+...
T Consensus 322 -~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~ 355 (382)
T PRK11128 322 -PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH 355 (382)
T ss_pred -CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566788889875 44567788999999888754
No 175
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.75 E-value=1.6e-07 Score=97.15 Aligned_cols=192 Identities=16% Similarity=0.159 Sum_probs=118.0
Q ss_pred hhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCC----
Q 013645 111 WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG---- 186 (439)
Q Consensus 111 ~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~---- 186 (439)
|.+++.+-++.|+|..+.++.--+|+-|+. .+++-...+|+.+++..+|+++|-++++..++.+.+
T Consensus 237 ~llff~~q~l~GIG~Tpi~tlGisYiDDnv----------k~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~ 306 (735)
T KOG3626|consen 237 FLLFFLGQLLLGIGATPIFTLGISYIDDNV----------KKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLS 306 (735)
T ss_pred HHHHHHHHHHhhcCCCCCccCCCccccccc----------cccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccC
Confidence 346678899999999999999999999997 667889999999999999999999999887653211
Q ss_pred ---------CCCCcchHHHHHHHHHHHHHHHHHHhccCCCcc-c----cccc----cccc---h--hhhhhHHHHHHHHH
Q 013645 187 ---------GSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK-G----EKET----ADAS---V--NFYSYLVSLSKSIT 243 (439)
Q Consensus 187 ---------~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~-~----~~~~----~~~~---~--~~~~~~~~~~~~~~ 243 (439)
.+.|-+|+-|++.+.+.++..+..+++|+..++ . .++. ++.+ . ...++.++..+..+
T Consensus 307 ~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~ 386 (735)
T KOG3626|consen 307 PIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIK 386 (735)
T ss_pred CCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHH
Confidence 112312444556666666665666777753221 1 0000 0100 0 11224455667788
Q ss_pred HhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhcc-cccccchHHHHH-HHHHHHHHHHHhhhhhhcCCC
Q 013645 244 TLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP-ALGVSGVGGAMA-VYGAFDAICSLAAGRLTTGLP 312 (439)
Q Consensus 244 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~-~~~i~~~ig~~~~G~l~d~~~ 312 (439)
++++||-+....+.-.+--....-+.+..|+++.++ +.+.+..-.++. +.-.+..+|-+++|.+.+|+.
T Consensus 387 ~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfk 457 (735)
T KOG3626|consen 387 RLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFK 457 (735)
T ss_pred HHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeec
Confidence 899998887665542221111111224566666432 333344444433 233344577778899988875
No 176
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.75 E-value=2.4e-07 Score=92.33 Aligned_cols=145 Identities=14% Similarity=0.114 Sum_probs=97.0
Q ss_pred hcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHH
Q 013645 271 EFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLI 350 (439)
Q Consensus 271 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (439)
.++....+.+.+.++.+.....+.++..++.++.|+++||++||+. +..+.....++.. ...+.++ +..+++
T Consensus 35 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~-l~~~~~~~~~~~~--~~~~~~~-----~~~l~~ 106 (406)
T PRK15402 35 GMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPV-MLAGVAFFILTCL--AILLAQS-----IEQFTL 106 (406)
T ss_pred chHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH-HHHHHHHHHHHHH--HHHHHcc-----HHHHHH
Confidence 3443333334555667888888999999999999999999998874 4455555554432 2233332 355667
Q ss_pred HHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHHHHHH
Q 013645 351 MAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGI 423 (439)
Q Consensus 351 ~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~~~~~~~ 423 (439)
..++.|++.+...+..++.+.|.+|++++ .+.+.......++..+++.+.. ..++.+.+++.++..+++.+..
T Consensus 107 ~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK15402 107 LRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGL 184 (406)
T ss_pred HHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 78888999888888888999999988765 4566665555556666655443 3456677776666666555543
No 177
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.74 E-value=1.3e-07 Score=95.70 Aligned_cols=135 Identities=16% Similarity=0.098 Sum_probs=82.7
Q ss_pred HHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhhh------cc------hhhHHHHHHHHhhhHHHHH-Hhhh
Q 013645 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANL------FP------SWYTMVPASLYLGFAASII-WVGE 132 (439)
Q Consensus 66 ~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~~------~~------~~~~li~~r~i~Gig~g~~-~~~~ 132 (439)
........++.++.|++.||+|||+.+..+..+..+...... .+ ++..+... .+.+.+.+.. .+..
T Consensus 326 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 404 (481)
T TIGR00879 326 IIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFI-LLFIAFFAMGWGPVP 404 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHH-HHHHHHHHccccCee
Confidence 344445567888999999999999999888765544332211 11 22222222 2223232222 2334
Q ss_pred hhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHH-
Q 013645 133 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC- 211 (439)
Q Consensus 133 ~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~- 211 (439)
..+++|.. |+++|++++|+.....++|.++++.+...+..+. +|+.. |++.+++++++.+..+
T Consensus 405 ~~~~~~~~----------p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-----~~~~~-f~~~~~~~~~~~i~~~~ 468 (481)
T TIGR00879 405 WVIVSEIF----------PLSLRPKGISIAVAANWLANFIVGFLFPTMLESI-----GVGGV-FIFFGGLNVLGLIFVYF 468 (481)
T ss_pred hhhhhccC----------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----Cccce-ehhHHHHHHHHHHHHhe
Confidence 44455554 8889999999999999999999998877765432 35442 4455565655555543
Q ss_pred hccCCC
Q 013645 212 FLRKEE 217 (439)
Q Consensus 212 ~l~~~~ 217 (439)
+.||++
T Consensus 469 ~~~~~~ 474 (481)
T TIGR00879 469 FLPETK 474 (481)
T ss_pred ecccCC
Confidence 445543
No 178
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.73 E-value=7.9e-07 Score=89.69 Aligned_cols=141 Identities=10% Similarity=0.076 Sum_probs=95.2
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhh
Q 013645 279 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 358 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 358 (439)
.+++.++.+.....+.++..++.++.|+++||++||+.+ ..+.++..++.. .....++.. .....+++..++.|++
T Consensus 56 ~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~-~~~~~~~~~~~~--~~~~~~~~~-~~~~~l~~~~~l~g~~ 131 (438)
T TIGR00712 56 QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL-PAGLILSAAVML--LMGFVPWAT-SSIAIMFVLLFLNGWF 131 (438)
T ss_pred cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceeh-HHHHHHHHHHHH--HHhcccccc-chHHHHHHHHHHHHHH
Confidence 356677889988999999999999999999999988744 456655554432 122221110 0023455667778888
Q ss_pred hhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHH-----hhhhhHHHHHHHHHHHHHHHHHHH
Q 013645 359 DGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFI-----GPYISLQAMLIVMVVGICVALVGI 423 (439)
Q Consensus 359 ~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i-----~~~~~~~~~~~~~~~~~~~~~~~~ 423 (439)
.+...+.....+.+.+|+++ +.+.+.++...++|..++..+ ....+++..+++..+..++..+..
T Consensus 132 ~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~ 202 (438)
T TIGR00712 132 QGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFA 202 (438)
T ss_pred hhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 88888888889999998765 558888888877776655422 223456777777666655544333
No 179
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.72 E-value=3.5e-07 Score=93.62 Aligned_cols=176 Identities=16% Similarity=0.148 Sum_probs=108.3
Q ss_pred hhccchhHHHHHHHHHhhHHHHH---HHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhH
Q 013645 245 LLADVRMLLIIPLFAYSGLQQAF---VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGG 321 (439)
Q Consensus 245 ~~~~~~~~~l~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g 321 (439)
-+++|.+..+........+.... -.+++.... .-+...++.+.....+-.++.+++.|.+.||++||+.++ .+
T Consensus 6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~l---t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili-~~ 81 (524)
T PF05977_consen 6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQL---TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILI-LS 81 (524)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH-HH
Confidence 46777777666544433333221 123333221 223445777777777778888999999999999988554 44
Q ss_pred HHHHHHH-HHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHH
Q 013645 322 AIAQVVV-FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFI 399 (439)
Q Consensus 322 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i 399 (439)
-++.++. ..+..+.+....+ .+.+++..++.|.+.+...|..++++.++.|+++ ..|.++.....+++-.+|+.+
T Consensus 82 ~~~~~~~~~~L~~l~~~~~~~---~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPal 158 (524)
T PF05977_consen 82 QLLRALVALLLAVLAFFGLLS---PWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPAL 158 (524)
T ss_pred HHHHHHHHHHHHHHHHhCcCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchH
Confidence 4443322 1111222322222 4667888999999999999999999999999876 446665555555554444444
Q ss_pred h----hhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 400 G----PYISLQAMLIVMVVGICVALVGILFLT 427 (439)
Q Consensus 400 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (439)
+ ...+....+.+.++..+++.+......
T Consensus 159 gG~Lva~~G~~~~f~inalsfl~~i~~l~~~~ 190 (524)
T PF05977_consen 159 GGILVAFFGAAAAFLINALSFLISILALLRWK 190 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3 345666777777666666555444443
No 180
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.72 E-value=5.6e-07 Score=91.61 Aligned_cols=175 Identities=13% Similarity=0.026 Sum_probs=100.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhh-hccCCCCchH----HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHH
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLETT-VNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~g~~----~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~ 102 (439)
++++.+.+..++....+.......|. +.++.+.+.. ..+.......+++++.|+++||+|||+.+..+.....+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALII 337 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 44566656555555555444444443 3333334332 233444556788899999999999998876654433222
Q ss_pred H--Hhh-hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHH-hhhhhhHHHH
Q 013645 103 V--AAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS-HQFVGNLITL 178 (439)
Q Consensus 103 ~--~~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~-G~~iG~~i~~ 178 (439)
. ... ..++...+.+.+++.|+.........+....|.. |+++||++.|+.....++ |..+++.+.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~----------p~~~~g~a~gi~~~~g~l~g~~~~~~~~G 407 (467)
T PRK09556 338 FTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFV----------PKKAIGVANGIKGTFAYLFGDSFAKVGLG 407 (467)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhc----------chhhHHHHHHHHHHHHHHHhHHHHhhhHH
Confidence 1 111 2245545556777777654332222234444554 888999999999887776 6688888777
Q ss_pred HhhcCCCC-------CCCCcchHHHHHHHHHHHHHHHHHHhc
Q 013645 179 AVLKDDKG-------GSTSGTTLLFIVFLGVITLGTILMCFL 213 (439)
Q Consensus 179 ~l~~~~~~-------~~~~w~~~~~~~~~~~~~l~~~~~~~l 213 (439)
.+.....+ ...+|+.. |.+..++.+++.+..+++
T Consensus 408 ~i~~~~~~g~~~~~~~~~~~~~~-f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 408 MIADPTKNGTPIFGYTLTGWAGT-FAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHhcccccccccccccccChHHH-HHHHHHHHHHHHHHHHHH
Confidence 77651000 02357664 444556566666555544
No 181
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.72 E-value=3.7e-07 Score=90.61 Aligned_cols=146 Identities=16% Similarity=0.114 Sum_probs=96.5
Q ss_pred HHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccch
Q 013645 266 AFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGT 345 (439)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 345 (439)
..+.+.+|....+.+.+.++.+.....+.++.+++.++.|+++||++||+.+ ..+.....++.. .....++ .
T Consensus 25 ~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~-~~~~~~~~~~~~--~~~~~~~-----~ 96 (394)
T PRK11652 25 TIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI-LVGMSIFILGTL--VALFAHS-----L 96 (394)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH-HHHHHHHHHHHH--HHHHHcc-----H
Confidence 3333445544333456667788888899999999999999999999998744 455555544432 2223322 3
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHH
Q 013645 346 LYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVA 419 (439)
Q Consensus 346 ~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~~~ 419 (439)
..+++..++.|++.+...+...++..|.+++++ +.+.+.++....++..+++.+.. ..++.+.+++.++..++.
T Consensus 97 ~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~ 175 (394)
T PRK11652 97 TVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGV 175 (394)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 556677888899888877788888889887655 34667777777766666655543 335666666655544433
No 182
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.71 E-value=1.3e-07 Score=93.91 Aligned_cols=175 Identities=10% Similarity=0.065 Sum_probs=103.4
Q ss_pred cchhHHHHHHHHHhhHHHHHHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHH
Q 013645 248 DVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV 326 (439)
Q Consensus 248 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~ 326 (439)
||.+|.+....++.....+.+.+.++.++.+ .+.+.++.|.+...+.++..+++++.|+++||+|||+.++ .+....+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~-~~~~~~~ 79 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLL-WIISGLL 79 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH-HHHHHHH
Confidence 4667766654444444444444555554433 3566778899999999999999999999999999987553 3333322
Q ss_pred HHHHH-HHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHHhhh---
Q 013645 327 VVFLW-ILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY--- 402 (439)
Q Consensus 327 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i~~~--- 402 (439)
..... ....+.+...........+..++.|++.+...+...++..+..++ ++..++..+...++|.++++.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 158 (396)
T TIGR00882 80 VLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN-SNFEYGKARMFGCVGWALCASIAGILFS 158 (396)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh-cccccchhhhhcccHHHHHHHHHhhhhc
Confidence 22110 011121110000012234456777888877777777777665433 2335666667777777777666543
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 013645 403 ISLQAMLIVMVVGICVALVGIL 424 (439)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~ 424 (439)
.++...+++.+++.++.++..+
T Consensus 159 ~~~~~~f~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 159 IDPQIVFWLGSGFALILMLLLM 180 (396)
T ss_pred cCchHHHHHHHHHHHHHHHHHH
Confidence 2566677666665555544333
No 183
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.71 E-value=2.7e-07 Score=92.80 Aligned_cols=111 Identities=10% Similarity=-0.106 Sum_probs=81.3
Q ss_pred HHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-hc-chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhh
Q 013645 69 YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (439)
Q Consensus 69 ~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~~-~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~ 146 (439)
.....++.++.+++.||+|+|+++..+..+..+..+.. .. ++...+++..++.|++.+...+...++++|..+....
T Consensus 267 ~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~- 345 (437)
T TIGR00792 267 IVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEW- 345 (437)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-
Confidence 33445677889999999999999998887655543332 22 3555556677889999988888888888877642211
Q ss_pred cCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhc
Q 013645 147 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (439)
Q Consensus 147 ~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~ 182 (439)
..+++++|.++|++.....+|..+|+.+.+.+..
T Consensus 346 --~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 346 --KTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred --hcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1134568999999999999999999988877754
No 184
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.71 E-value=4.5e-07 Score=93.03 Aligned_cols=158 Identities=14% Similarity=0.070 Sum_probs=105.7
Q ss_pred HhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCC
Q 013645 260 YSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVT 339 (439)
Q Consensus 260 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~ 339 (439)
...+..+......|+...+.+.+.++.++....+.++..++.++.|+++||+|||+.+ ..+.++..++.. .....++
T Consensus 17 ~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l-~~~~~~~~~~~~--~~~~a~~ 93 (495)
T PRK14995 17 PVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL-MLGGTLFGLASL--AAAFSPT 93 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHHHHHHHHHH--HHHHcCC
Confidence 3333333443345544332234455678888889999999999999999999988744 566666555433 2233333
Q ss_pred CCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhc-cCCc-hhhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHH
Q 013645 340 SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILF-KHDT-EGAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMV 413 (439)
Q Consensus 340 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~-p~~~-~~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~ 413 (439)
+..+++.-++.|++.+...+...+.+.+.+ |+++ +.+.|++.....+|..+++.+.+ ..++++.+++..
T Consensus 94 -----~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~ 168 (495)
T PRK14995 94 -----ASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINV 168 (495)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHH
Confidence 356777788999999988888888887776 4343 44778877777778777776654 447888888777
Q ss_pred HHHHHHHHHHHH
Q 013645 414 VGICVALVGILF 425 (439)
Q Consensus 414 ~~~~~~~~~~~~ 425 (439)
.+.++..+..++
T Consensus 169 ~~~~~~~~l~~~ 180 (495)
T PRK14995 169 PIVLVVMGLTAR 180 (495)
T ss_pred HHHHHHHHHHHH
Confidence 666665554433
No 185
>PRK11043 putative transporter; Provisional
Probab=98.71 E-value=4.1e-07 Score=90.51 Aligned_cols=148 Identities=15% Similarity=0.101 Sum_probs=98.0
Q ss_pred hhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHH
Q 013645 270 AEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPL 349 (439)
Q Consensus 270 ~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (439)
+.+++...+.+.+.++.+.....+.++..++.++.|+++||++||+.+ ..+..+..++.. ...+.++ ...++
T Consensus 27 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~-~~~~~~~~~~~~--~~~~~~~-----~~~l~ 98 (401)
T PRK11043 27 PAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL-LAGLSLFALGSL--GMLWVES-----AAQLL 98 (401)
T ss_pred hhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH-HHHHHHHHHHHH--HHHHhcC-----HHHHH
Confidence 344433333355667789888899999999999999999999988744 455555544332 2233332 35566
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHHHHHHH
Q 013645 350 IMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGIL 424 (439)
Q Consensus 350 ~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~ 424 (439)
+..++.|++.+...+...+++.|.+|++++ ++++..+....++..+++.+.+ ..++++.+++..+..++..+..+
T Consensus 99 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (401)
T PRK11043 99 VLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTL 178 (401)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 677788888877777788899999988754 4666665555566655554443 34666777766666655555443
Q ss_pred H
Q 013645 425 F 425 (439)
Q Consensus 425 ~ 425 (439)
+
T Consensus 179 ~ 179 (401)
T PRK11043 179 R 179 (401)
T ss_pred H
Confidence 3
No 186
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.71 E-value=1.2e-06 Score=86.87 Aligned_cols=130 Identities=15% Similarity=0.260 Sum_probs=91.7
Q ss_pred hhHHHHHHHhchhHHHHHHhHHHHH-HHHhh-hcchhhHH----HHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCC
Q 013645 77 LVASLVVRVLGSKNALILGTTGYWL-FVAAN-LFPSWYTM----VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLH 150 (439)
Q Consensus 77 ~~~g~l~dr~G~r~~l~~g~~~~~~-~~~~~-~~~~~~~l----i~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~ 150 (439)
.+.+++.+|+|.|+++.++.+.+.+ +.+.. ..++.+.. +..-.++|+..+..+.+...|+.+..
T Consensus 261 ~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~---------- 330 (400)
T PF03825_consen 261 FFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIA---------- 330 (400)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC----------
Confidence 4689999999999999999998877 43333 32443332 22345799999999999999998887
Q ss_pred cccchhhhhHHHHHH-HHHhhhhhhHHHHHhhcCCCC-CCCCcchHHHHHHHHHHHHHHHHH-HhccCCC
Q 013645 151 EGTVIGSFNGEFWGM-FASHQFVGNLITLAVLKDDKG-GSTSGTTLLFIVFLGVITLGTILM-CFLRKEE 217 (439)
Q Consensus 151 ~~~~rg~~~g~~~~~-~~~G~~iG~~i~~~l~~~~~~-~~~~w~~~~~~~~~~~~~l~~~~~-~~l~~~~ 217 (439)
|++.|+++.|++.+. .++|..+|+.+++.+.+..+. +...|. .+|.+.+++.++..+++ ++.||++
T Consensus 331 p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~-~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 331 PPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWS-AVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred CccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHH-HHHHHHHHHHHHHHHHHHhhccCCC
Confidence 899999999998764 579999999999998875431 122332 24445555555444444 3455543
No 187
>PRK09952 shikimate transporter; Provisional
Probab=98.70 E-value=8.4e-07 Score=89.54 Aligned_cols=131 Identities=11% Similarity=0.003 Sum_probs=83.7
Q ss_pred HHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh---h-c-chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhh
Q 013645 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN---L-F-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (439)
Q Consensus 72 ~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~---~-~-~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~ 146 (439)
..++.++.|+++||+|||+++..+.++..+..... . . ++...+++..++.|++.+..++...++++|..
T Consensus 299 ~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~------ 372 (438)
T PRK09952 299 SCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMF------ 372 (438)
T ss_pred HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
Confidence 34566789999999999999887765433322211 1 1 23334444556678888887777788888886
Q ss_pred cCCCcccchhhhhHHHHHH-HHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCC
Q 013645 147 HKLHEGTVIGSFNGEFWGM-FASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (439)
Q Consensus 147 ~~~~~~~~rg~~~g~~~~~-~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~ 216 (439)
|.+.|+...|+.+.. ..+|+.++|.+.+.+..... .+|... +....++.+++.+..+.+||+
T Consensus 373 ----p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~---~~~~~~-~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 373 ----GASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG---GSWHSV-AIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred ----CcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC---CCchHH-HHHHHHHHHHHHHHHHHcccc
Confidence 778898888875443 44778888888777754221 135442 333444455555555666653
No 188
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.68 E-value=9.3e-07 Score=85.97 Aligned_cols=167 Identities=17% Similarity=0.106 Sum_probs=121.2
Q ss_pred HHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHH
Q 013645 254 IIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL 333 (439)
Q Consensus 254 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~ 333 (439)
+....|..|..-....+.+|+.-.+-+.+....|...+.|+.+..+++++...++||+.||+.+ .....+..++-. .
T Consensus 18 La~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lL-l~~l~lFi~~n~--l 94 (394)
T COG2814 18 LALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLL-LGLLALFIVSNL--L 94 (394)
T ss_pred HHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHH-HHHHHHHHHHHH--H
Confidence 3333344444333344566655333345556789999999999999999999999999988744 344444544432 2
Q ss_pred hhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHH----HHHhhhhhHHHH
Q 013645 334 INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVV----FFIGPYISLQAM 408 (439)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~----~~i~~~~~~~~~ 408 (439)
....+| +..+.+.=++.|+..+.+++...++..++.|+++ +++.+.......++..+| -+++...+++..
T Consensus 95 ~alAp~-----f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~ 169 (394)
T COG2814 95 SALAPS-----FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRAT 169 (394)
T ss_pred HHHhcc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHH
Confidence 234444 5788889999999999999999999999999876 468888777777777654 466677889999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 013645 409 LIVMVVGICVALVGILFLTI 428 (439)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~ 428 (439)
|+..+++.++..+..+..-.
T Consensus 170 F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 170 FLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 99988888887776665544
No 189
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.68 E-value=2.5e-07 Score=90.93 Aligned_cols=137 Identities=14% Similarity=0.025 Sum_probs=100.2
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhh
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
+.+.++.+.+...+.++..++.++.|++.||+|||+.+ ..+.++..++.. ...+.++ +..+++..++.|++.
T Consensus 25 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~-~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~l~g~~~ 96 (399)
T TIGR00893 25 GLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTL-AVFIVIWGVFTG--LQAFAGA-----YVSLYILRVLLGAAE 96 (399)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceee-HHHHHHHHHHHH--HHHHHcC-----HHHHHHHHHHHHHHH
Confidence 45566788999999999999999999999999988755 455555544332 2233332 366778889999999
Q ss_pred hhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHHH
Q 013645 360 GVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGIL 424 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~ 424 (439)
+...+..++++.|.+|+++ +.+.+..+...++|..+++.+... .++++.+++.++..++..+..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (399)
T TIGR00893 97 APFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWL 166 (399)
T ss_pred HhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998765 457888888888888777655543 3566666666665555444433
No 190
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.68 E-value=1e-06 Score=90.19 Aligned_cols=174 Identities=10% Similarity=0.070 Sum_probs=112.7
Q ss_pred hhccchhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCC-----CCcceehh
Q 013645 245 LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL-----PSITFIVS 319 (439)
Q Consensus 245 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~-----~~r~~~~~ 319 (439)
..++||...+..+.+..|+......+..+..+.+.+.+.+++|.... .+.. .++++++|.++||+ |||+.++.
T Consensus 8 ~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~-~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll 85 (491)
T PRK11010 8 IFQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSL-VGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLL 85 (491)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH-HHHH-HHHHHHHHHHHHcccccCCCCchHHHH
Confidence 34566776666666777777665555556555555666677777532 2222 26889999999998 88876555
Q ss_pred hHHHHHHHHHHHHHhhc-cCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHH
Q 013645 320 GGAIAQVVVFLWILINY-SVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVF 397 (439)
Q Consensus 320 ~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~ 397 (439)
.+.+..+++... +.+ .+..+ ...+.+..++.+++.+...+...++..|.+|++++ .+.+.......+|..++.
T Consensus 86 ~~~i~~~~~~~~--~a~~~~~~~---l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~ 160 (491)
T PRK11010 86 ATQLLLLVAIAA--MGFLEPGTQ---LRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSG 160 (491)
T ss_pred HHHHHHHHHHHH--HHHcCCcch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHH
Confidence 555555444322 223 22222 34566677788888888888999999999986654 466777776667766654
Q ss_pred HH----hh-hhhHHHHHHHHHHHHHHHHHHHHH
Q 013645 398 FI----GP-YISLQAMLIVMVVGICVALVGILF 425 (439)
Q Consensus 398 ~i----~~-~~~~~~~~~~~~~~~~~~~~~~~~ 425 (439)
.+ .. ..++...+++.+++.++..+..++
T Consensus 161 ~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 161 GLALWLADRYLGWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred HHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence 33 23 357788888877766666554443
No 191
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.66 E-value=2.9e-07 Score=90.67 Aligned_cols=108 Identities=15% Similarity=-0.024 Sum_probs=77.4
Q ss_pred HHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHH--H-hhh--cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhh
Q 013645 67 ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV--A-ANL--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (439)
Q Consensus 67 ~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~--~-~~~--~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~ 141 (439)
.......++.++.|++.||+|||+.+..+..+..+.. . ... .++...++...++.|++.+..++...++++|..
T Consensus 263 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~- 341 (394)
T TIGR00883 263 LSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELF- 341 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhC-
Confidence 3344556777899999999999998875554332221 1 111 245555666778889888888888888888876
Q ss_pred hhhhhcCCCcccchhhhhHHH-HHHHHHhhhhhhHHHHHhhcCC
Q 013645 142 SHASNHKLHEGTVIGSFNGEF-WGMFASHQFVGNLITLAVLKDD 184 (439)
Q Consensus 142 ~~a~~~~~~~~~~rg~~~g~~-~~~~~~G~~iG~~i~~~l~~~~ 184 (439)
|+++|++++|+. .....+|..+||.+++.+..+.
T Consensus 342 ---------p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~ 376 (394)
T TIGR00883 342 ---------PTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMT 376 (394)
T ss_pred ---------CccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHc
Confidence 888999999984 4555678889999888876643
No 192
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.65 E-value=1.9e-06 Score=87.33 Aligned_cols=137 Identities=12% Similarity=0.108 Sum_probs=92.4
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccC--CCCccchHHHHHHHHHHh
Q 013645 279 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV--TSGVLGTLYPLIMAALLG 356 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~G 356 (439)
++++.++.+.......++.++++++.|+++||+|+|+. +..+.++.++... ...+.+ +.+ ....++..++.|
T Consensus 58 ~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~-l~~~~~~~~i~~~--~~~~~~~~~~~---~~~~~~~~~l~g 131 (452)
T PRK11273 58 QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVF-LPAGLILAAAVML--FMGFVPWATSS---IAVMFVLLFLCG 131 (452)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchh-HHHHHHHHHHHHH--HHHhhhccccc---HHHHHHHHHHHH
Confidence 36666788988899999999999999999999998874 4566655544332 222221 111 345566677889
Q ss_pred hhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHH-HHHHHHh----hhhhHHHHHHHHHHHHHHHHH
Q 013645 357 IGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASI-AVVFFIG----PYISLQAMLIVMVVGICVALV 421 (439)
Q Consensus 357 ~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~-~i~~~i~----~~~~~~~~~~~~~~~~~~~~~ 421 (439)
++.+...+...+.+.+.+|+++ +.+.|+++....+|. ..++.+. ...++.+.+++.+++.++..+
T Consensus 132 i~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~ 202 (452)
T PRK11273 132 WFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVAL 202 (452)
T ss_pred HHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 9888887877788889898765 457888888777765 3344332 223566677666655554433
No 193
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.65 E-value=5.8e-07 Score=88.00 Aligned_cols=114 Identities=16% Similarity=0.186 Sum_probs=79.4
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhh
Q 013645 279 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 358 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 358 (439)
.+.+.++.+.+...+.++.+++.++.|+++||+|||+.+ ..+.++..++.. ...+.+. + +..+++..++.|++
T Consensus 32 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~-~~~~~~~~i~~~--~~~~~~~-~---~~~~~~~~~~~g~~ 104 (366)
T TIGR00886 32 LGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTT-TLSLLLLAIPCL--WAGLAVQ-S---YSVLLLLRLFIGIA 104 (366)
T ss_pred hCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHH-HHHHHHHHHHHH--HHHHHhh-h---HHHHHHHHHHHHHh
Confidence 355666788888899999999999999999999988754 456666555433 2233331 1 35566677788888
Q ss_pred hhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHh
Q 013645 359 DGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIG 400 (439)
Q Consensus 359 ~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~ 400 (439)
.+.. +...+++++.+|+++ +.+.+.+....++|..++..+.
T Consensus 105 ~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 146 (366)
T TIGR00886 105 GGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVM 146 (366)
T ss_pred chhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHH
Confidence 6654 456788999998765 4577777766666665554443
No 194
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.65 E-value=6.8e-07 Score=86.38 Aligned_cols=176 Identities=13% Similarity=0.147 Sum_probs=120.2
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhhhHhhhcc-CCCCchHHH---HHHH-HHHHhhhhhHHHHHHHhchhHHHHHHhHHHH
Q 013645 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNT-EGNLGTISL---GILY-TSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (439)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~g~~~~---~~~~-~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~ 100 (439)
.++|+.+.-++-+++-.+.++.......... +.+++...+ ++.. ..-+.++++.|++.||+|.|+++..+.+.+.
T Consensus 250 ~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~ 329 (438)
T COG2270 250 GRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILS 329 (438)
T ss_pred cccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHH
Confidence 4457777777777776666655544444443 345554332 2222 2335688999999999999999999998876
Q ss_pred HHHHhh-hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHH
Q 013645 101 LFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (439)
Q Consensus 101 ~~~~~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~ 179 (439)
+..+.. ....-..+.++..+.|...|+.+...-+|.++.. |++|-++.+|++......+...||.+-+.
T Consensus 330 ~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lv----------p~~k~~~fFglyaltgra~S~~gp~lv~v 399 (438)
T COG2270 330 IAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLV----------PKGKEGRFFGLYALTGRAASFLGPFLVAV 399 (438)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhC----------CCccccceeehhhhhhhHHHHHHHHHHHH
Confidence 655443 3333333445779999999999999999999987 88999999999999999999999987666
Q ss_pred hhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCC
Q 013645 180 VLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (439)
Q Consensus 180 l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~ 216 (439)
+.+... +-|. -+....++..++.++.+++|++
T Consensus 400 ~t~iTg----~~r~-g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 400 ITQITG----SSRA-GVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHhc----chhh-HHHHHHHHHHhhHhhEEeecCC
Confidence 554332 1233 2333444455566555566655
No 195
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.65 E-value=2.9e-07 Score=94.62 Aligned_cols=134 Identities=11% Similarity=0.009 Sum_probs=76.9
Q ss_pred hhhhhHHHHHHHhchhHHHHHHhHHHHHHHH--hhhc---chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcC
Q 013645 74 CFSLVASLVVRVLGSKNALILGTTGYWLFVA--ANLF---PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (439)
Q Consensus 74 ~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~--~~~~---~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~ 148 (439)
.+.+.++++.||+|||+++..+..+.++... .... ++...+...-+...++....++....+.+|..
T Consensus 350 ~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-------- 421 (502)
T TIGR00887 350 PGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF-------- 421 (502)
T ss_pred HHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC--------
Confidence 4667889999999999999888765544322 1111 11111111111111111111222334455665
Q ss_pred CCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCC-C-C---CCCcchHHHHHHHHHHHHHHHHHHhccCCCc
Q 013645 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK-G-G---STSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (439)
Q Consensus 149 ~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~-~-~---~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~ 218 (439)
|++.|+++.|+......+|..+++.+...+..... + + ..+... .|.+++++.+++.+..+++||++.
T Consensus 422 --p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 422 --PTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGH-VLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred --chhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchH-HHHHHHHHHHHHHHHheEeccCCC
Confidence 88999999999999999999999887766654211 0 0 112222 355666666666555566787654
No 196
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.63 E-value=2.3e-07 Score=94.04 Aligned_cols=145 Identities=10% Similarity=0.030 Sum_probs=91.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHHH----HHHHHHHHhhhhhHHHHHHH--hchhHHHHHHh--HHH
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISL----GILYTSFTCFSLVASLVVRV--LGSKNALILGT--TGY 99 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~----~~~~~~~~~~~~~~g~l~dr--~G~r~~l~~g~--~~~ 99 (439)
++++......++....+.......+...++.+.+.... ++......+++++.|++.|| +++|+...++. +..
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 320 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFN 320 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 34454444444444444333333333333333433322 33333344566778999997 34444443332 222
Q ss_pred HHHHH-hhhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHH
Q 013645 100 WLFVA-ANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (439)
Q Consensus 100 ~~~~~-~~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~ 178 (439)
++..+ ....++++.+++.+++.|++.+..++...+.+.+.. |++++|+.+|++....++|.++||.+++
T Consensus 321 ~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~----------~~~~~g~~~g~~~~~~~lg~~igp~i~G 390 (455)
T TIGR00892 321 GLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLV----------GAQRFSSAVGLVTIVECCAVLIGPPLAG 390 (455)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHh----------hHHHHhhHHhHHHHHHHHHHHcccccee
Confidence 22222 234567777778899999999988888888888776 7889999999999999999999999888
Q ss_pred Hhhc
Q 013645 179 AVLK 182 (439)
Q Consensus 179 ~l~~ 182 (439)
.+..
T Consensus 391 ~l~~ 394 (455)
T TIGR00892 391 RLVD 394 (455)
T ss_pred eeeh
Confidence 7754
No 197
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.63 E-value=6.9e-07 Score=90.11 Aligned_cols=166 Identities=13% Similarity=0.110 Sum_probs=102.7
Q ss_pred HHhhHHHHH--HHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhc----CCCCcceehhhHHHHHHHHHHHH
Q 013645 259 AYSGLQQAF--VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTT----GLPSITFIVSGGAIAQVVVFLWI 332 (439)
Q Consensus 259 ~~~g~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d----~~~~r~~~~~~g~~~~~~~~~~~ 332 (439)
...|++.++ ..+..++++.+.+.+....+.+..+..+..++.+++.|+++| |+|||++++..+.+...+++.
T Consensus 12 ~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~-- 89 (477)
T TIGR01301 12 VAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVI-- 89 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHH--
Confidence 334554332 233333333333455566788888888999999999999999 599998776555555554433
Q ss_pred HhhccCCC-----------C-ccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch---hhHHHHHHHHHHHHHHHH
Q 013645 333 LINYSVTS-----------G-VLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE---GAFAQLKVWQCASIAVVF 397 (439)
Q Consensus 333 ~~~~~~~~-----------~-~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~---~a~s~~~~~~~~g~~i~~ 397 (439)
++.+.++. . ........+...+..++....++...++++|+.|++++ .+++..+...++|..+++
T Consensus 90 ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~ 169 (477)
T TIGR01301 90 LIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGY 169 (477)
T ss_pred HHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 23343221 0 00001223344455667777788889999999998753 367888888888888877
Q ss_pred HHhhhh-------------------hHHHHHHHHHHHHHHHHHHHHHH
Q 013645 398 FIGPYI-------------------SLQAMLIVMVVGICVALVGILFL 426 (439)
Q Consensus 398 ~i~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 426 (439)
.++... +.+..|++.+++++++.....+.
T Consensus 170 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~ 217 (477)
T TIGR01301 170 AAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSA 217 (477)
T ss_pred HHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeee
Confidence 654321 45566776666666665555443
No 198
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.63 E-value=7.3e-07 Score=89.42 Aligned_cols=125 Identities=12% Similarity=-0.060 Sum_probs=91.9
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhh
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
+.+..+.+.....+.++..+++++.|++.||+|||+.+ ..+.+...++.. ...+.++ ...++++-++.|++.
T Consensus 49 ~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l-~~~~~~~~~~~~--~~~~~~~-----~~~l~~~r~l~G~g~ 120 (426)
T PRK12307 49 GLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLM-MWSIVAYSVGTG--LSGLASG-----VIMLTLSRFIVGMGM 120 (426)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH-HHHHHHHHHHHH--HHHHHhH-----HHHHHHHHHHHHHHH
Confidence 45556778888889999999999999999999988744 456655554432 2233332 356777888999999
Q ss_pred hhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHH
Q 013645 360 GVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVM 412 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~ 412 (439)
+...+...+++.|.+|++++ .+.+.+.....+|..+++.+.+ ..++.+.+++.
T Consensus 121 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~ 178 (426)
T PRK12307 121 AGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVG 178 (426)
T ss_pred hhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHH
Confidence 99999999999999998754 5778888877788777765543 23566666553
No 199
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.62 E-value=1.5e-07 Score=92.26 Aligned_cols=136 Identities=14% Similarity=0.101 Sum_probs=96.3
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhh
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
+.+.++.+.+.....++..++.++.|+++||++||+.+ ..+.++..++.. ...+.++ ....++..++.|++.
T Consensus 26 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~-~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~g~~~ 97 (379)
T TIGR00881 26 GLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFL-PIGLILCAIVNL--FFGFSTS-----LWVMAALWALNGIFQ 97 (379)
T ss_pred CCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehh-HHHHHHHHHHHH--HHHHhhh-----HHHHHHHHHHHHhhc
Confidence 45666789999999999999999999999999988744 566665555433 2234333 356777888899999
Q ss_pred hhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHH-HHh----hhhhHHHHHHHHHHHHHHHHHHH
Q 013645 360 GVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVF-FIG----PYISLQAMLIVMVVGICVALVGI 423 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~-~i~----~~~~~~~~~~~~~~~~~~~~~~~ 423 (439)
+...+..++++.+.+|++++ .+.+..+....+|..+++ .+. ...++.+.+++.+++.++..+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (379)
T TIGR00881 98 GMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLIC 167 (379)
T ss_pred cccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999987654 467777777777766665 232 33456666666665554444433
No 200
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.59 E-value=1.5e-06 Score=88.66 Aligned_cols=139 Identities=12% Similarity=0.030 Sum_probs=90.2
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhh
Q 013645 279 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 358 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 358 (439)
.+++.++.+.+...+.++..++.++.|+++||+|+|+.+ ..+.++..++.. ...+.++ +..+++..++.|++
T Consensus 66 ~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~-~~~~~~~~~~~~--~~~~~~s-----~~~l~~~r~l~G~~ 137 (476)
T PLN00028 66 LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGS-AFLLMLTAPAVF--CMSLVSS-----ATGFIAVRFFIGFS 137 (476)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH-HHHHHHHHHHHH--HHHHhcC-----HHHHHHHHHHHHHH
Confidence 345556777777788889999999999999999988744 455555444432 2334333 24555667778888
Q ss_pred hhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhh-------------hhhHHHHHHHHHHHHHHHHHHHH
Q 013645 359 DGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP-------------YISLQAMLIVMVVGICVALVGIL 424 (439)
Q Consensus 359 ~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 424 (439)
.+... ....++++.+|+++ +.+.++.+...++|..++..+.+ ..++++.+++.+++.++.++..+
T Consensus 138 ~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~ 216 (476)
T PLN00028 138 LATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVL 216 (476)
T ss_pred HHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence 77654 34567889998764 55778777666666555432222 13577777777776665555444
Q ss_pred HH
Q 013645 425 FL 426 (439)
Q Consensus 425 ~~ 426 (439)
++
T Consensus 217 ~~ 218 (476)
T PLN00028 217 TL 218 (476)
T ss_pred HH
Confidence 43
No 201
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.57 E-value=1.4e-06 Score=89.34 Aligned_cols=126 Identities=10% Similarity=-0.052 Sum_probs=91.1
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhh
Q 013645 279 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 358 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 358 (439)
.+.+.++.+.....+.++.+++.++.|++.||+|||+.+ ..+.++..++.. ...+.++ +..+++..++.|++
T Consensus 50 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~-~~~~~~~~~~~~--~~~~~~~-----~~~l~~~~~l~G~~ 121 (496)
T PRK03893 50 FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAM-VISIVLFSVGTL--ACGFAPG-----YWTLFIARLVIGMG 121 (496)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH-HHHHHHHHHHHH--HHHHHhH-----HHHHHHHHHHHHHH
Confidence 345556778888888999999999999999999988744 455555544432 2233322 35677788899999
Q ss_pred hhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHH
Q 013645 359 DGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVM 412 (439)
Q Consensus 359 ~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~ 412 (439)
.+...+...+++.+.+|++++ .+.+.++...++|..+++.+.. ..++.+.+.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~ 180 (496)
T PRK03893 122 MAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIG 180 (496)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 999899999999999988754 4778888877788777765543 33566655543
No 202
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.53 E-value=8.2e-07 Score=86.82 Aligned_cols=127 Identities=14% Similarity=0.036 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHHHHHHHH-----HHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHH
Q 013645 30 VHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYT-----SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA 104 (439)
Q Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~-----~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 104 (439)
++.+.+..++...++.......+...++.+.+....+.... ...++.+++|++.||+|+|+.+..+.++..+...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~ 290 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNA 290 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 44444444444444443333333333323444333333332 2346778899999999999998888876555433
Q ss_pred hh--hc----------chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHH
Q 013645 105 AN--LF----------PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMF 166 (439)
Q Consensus 105 ~~--~~----------~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~ 166 (439)
.. .. ++.+.++.+.++.+++.+..++...+++.+.+ |+++||+.+|++.+..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 291 GFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLS----------NPKFGATQMALLSSLS 354 (356)
T ss_pred HHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc----------CCCccHHHHHHHHHHH
Confidence 21 11 34456666788999999999999999999887 8999999999876654
No 203
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.53 E-value=1.8e-06 Score=84.98 Aligned_cols=137 Identities=13% Similarity=0.049 Sum_probs=91.9
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhh
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
+.+.++.|.+...+.++.++++++.|+++||+|||+ ++.........+.. .....+ + +..+++.-++.|++.
T Consensus 22 ~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~-~~~~~~~~~~~~~~--~~~~~~--~---~~~l~~~R~l~G~g~ 93 (368)
T TIGR00903 22 DVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRW-FLFGSLATFAAAAG--RLLDPF--N---YEWLLACQLLAALGQ 93 (368)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchH-HHHHHHHHHHHHHH--HHHHhc--c---HHHHHHHHHHHHhHh
Confidence 455667888888899999999999999999999776 33332222222211 111112 2 356778888889998
Q ss_pred hhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHHHHHHHH
Q 013645 360 GVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGILF 425 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~ 425 (439)
+.. ....+.+++.+|++++ .+.+..+....+|..+++.+.+ ..++++.+++.+++.++.++..++
T Consensus 94 ~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 94 PFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 764 4555566888887654 5788888888888877765554 347777777766665555554433
No 204
>PRK09848 glucuronide transporter; Provisional
Probab=98.53 E-value=1.6e-06 Score=87.78 Aligned_cols=154 Identities=12% Similarity=-0.046 Sum_probs=95.8
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhhhHhhhccC-CCCchHHHHHH----HHHHHhhhhhHHHHHHHhchhHHHHHHhHHHH
Q 013645 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTE-GNLGTISLGIL----YTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (439)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~g~~~~~~~----~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~ 100 (439)
.+|++..+.++.++.+..+.......+...++ .+......... .....+++++.+++.||+|+|+++.+|.++..
T Consensus 226 ~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~ 305 (448)
T PRK09848 226 RNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGT 305 (448)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 34455555555555555544443333333222 12222111111 12234567889999999999999999987655
Q ss_pred HHHHhh-hc--chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHH
Q 013645 101 LFVAAN-LF--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177 (439)
Q Consensus 101 ~~~~~~-~~--~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~ 177 (439)
+..+.. .. .+++.+++..++.|+|.+...+...+..+|..+.... +..++++|..+|++.....+|..+|+.+.
T Consensus 306 i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~---~~g~r~~G~~~~~~~~~~klg~aig~~i~ 382 (448)
T PRK09848 306 CGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEY---LTGVRIEGLTYSLFSFTRKCGQAIGGSIP 382 (448)
T ss_pred HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH---hhCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 433332 22 3455566667889999999888888888877642211 11234569999999999999999999887
Q ss_pred HHhhc
Q 013645 178 LAVLK 182 (439)
Q Consensus 178 ~~l~~ 182 (439)
+.+..
T Consensus 383 g~~l~ 387 (448)
T PRK09848 383 AFILG 387 (448)
T ss_pred HHHHH
Confidence 76643
No 205
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.51 E-value=3.8e-06 Score=82.14 Aligned_cols=147 Identities=9% Similarity=-0.025 Sum_probs=87.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCch----HHHHHHHHHHHhhhhhHHHHHHHh-chhHHHHHHhHHHHHH
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVL-GSKNALILGTTGYWLF 102 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~----~~~~~~~~~~~~~~~~~g~l~dr~-G~r~~l~~g~~~~~~~ 102 (439)
++.+.+.+...+....+.......|...++.+.+. ...+.......+++++.|++.||+ +||+.+..+.++..+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 276 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVG 276 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Confidence 34444444444444444433333333333323322 234444556677889999999999 5666766666655444
Q ss_pred HHhh-hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhh
Q 013645 103 VAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (439)
Q Consensus 103 ~~~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~ 181 (439)
.... ..++..... .-++.|++.+..++...+.+.+.. .+++++|...|+......+|..+||.+.+.+.
T Consensus 277 ~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~---------~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~ 346 (355)
T TIGR00896 277 LCGLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRS---------RQAAQAAALSAMAQSIGYLLAALGPLFVGVLH 346 (355)
T ss_pred HHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhc---------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332 222222222 346789999888877655554332 14567799999888888888899998888877
Q ss_pred cCC
Q 013645 182 KDD 184 (439)
Q Consensus 182 ~~~ 184 (439)
++.
T Consensus 347 ~~~ 349 (355)
T TIGR00896 347 DIS 349 (355)
T ss_pred HHh
Confidence 654
No 206
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.51 E-value=2.7e-06 Score=85.50 Aligned_cols=151 Identities=18% Similarity=0.097 Sum_probs=103.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhH----hh-hccCCCCchHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHH
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLE----TT-VNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~----~~-l~~~~~~g~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~ 102 (439)
|.+..+.+..++...+........ .. ++.+ +.......+......++.++.++++||+|+|+++..+.+++.+.
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~ 303 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALG 303 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHH
Confidence 445555555555554544333222 22 2222 22222333445555667788999999999999999999987775
Q ss_pred HHh-hhc--chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHH
Q 013645 103 VAA-NLF--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (439)
Q Consensus 103 ~~~-~~~--~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~ 179 (439)
.+. .+. ++.+.+++.-++.|++.+..++...+.++|..+.+... ..+++.|..+|.+.....+|..+++.+.+.
T Consensus 304 ~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~---tg~r~~g~~~s~~~~~~k~~~~la~~i~g~ 380 (428)
T PF13347_consen 304 FLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWK---TGRRREGMYFSVNSFFIKIGQGLAGAIVGL 380 (428)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHh---cCCCchHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 554 333 48888888899999999999999999999988654222 123456888898888889999998887666
Q ss_pred hhc
Q 013645 180 VLK 182 (439)
Q Consensus 180 l~~ 182 (439)
+..
T Consensus 381 ~l~ 383 (428)
T PF13347_consen 381 LLA 383 (428)
T ss_pred HHH
Confidence 544
No 207
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.51 E-value=9.5e-07 Score=73.16 Aligned_cols=125 Identities=15% Similarity=0.111 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHH
Q 013645 292 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG 371 (439)
Q Consensus 292 ~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~ 371 (439)
.++++..+++++.|++.||++||+.+ ..+.....++.. .....++ .....+..++.|++.+...+..++++.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~-~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~ 77 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVL-LVGLFIFVLSTA--MFALSSN-----ITVLIIARFLQGFGAAFALVAGAALIA 77 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHH-HHHHHHHHHHHH--HHHHhcc-----HHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 45677888999999999999988754 445544444432 2223322 355667788899999999999999999
Q ss_pred hhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHHH
Q 013645 372 ILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGICVALVGIL 424 (439)
Q Consensus 372 ~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~ 424 (439)
|.+|+++ +.+.+..+....+|..+++.+.+. .++...+++..+..+++.+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (141)
T TIGR00880 78 DIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLA 135 (141)
T ss_pred HHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHh
Confidence 9998775 457788888888888777655543 3455666666655555555443
No 208
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.51 E-value=7.1e-08 Score=93.85 Aligned_cols=136 Identities=13% Similarity=0.121 Sum_probs=104.6
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhh
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
+.+++..|++..++.+..++.+++.|.+.||+.|+. ++..|..+-..+.+ .-.+. + +++.+.++=.+.|+|.
T Consensus 64 ni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~-v~~vG~~iW~~Av~--~~~fs-~----~Fwq~~l~R~~vGiGe 135 (493)
T KOG1330|consen 64 NISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKR-VIAVGIFIWTLAVF--ASGFS-N----HFWQVLLCRGFVGIGE 135 (493)
T ss_pred CCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcce-EEeeHHHHHHHHHH--HHHHH-H----HHHHHHHHHHHhccch
Confidence 466677888888999999999999999999999876 44577766554322 22332 1 2577888999999999
Q ss_pred hhhhhhHHHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHHHHHHHHHH
Q 013645 360 GVLNTQLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIGPYI-----SLQAMLIVMVVGICVALVGI 423 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~p~~~~~-a~s~~~~~~~~g~~i~~~i~~~~-----~~~~~~~~~~~~~~~~~~~~ 423 (439)
+.+.|..+++++|.+|+++|+ +++++++.-..|..+|+.++... .+.+.+...+++.++..++.
T Consensus 136 As~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~ 205 (493)
T KOG1330|consen 136 ASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLV 205 (493)
T ss_pred hhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHH
Confidence 999999999999999998765 78999999999999888776432 36677766666655555444
No 209
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.50 E-value=0.00059 Score=68.76 Aligned_cols=279 Identities=11% Similarity=0.079 Sum_probs=137.2
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCC-CCc--hHH---HHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhH
Q 013645 24 KNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEG-NLG--TIS---LGILYTSFTCFSLVASLVVRVLGSKNALILGTT 97 (439)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~-~~g--~~~---~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~ 97 (439)
+...+.++.+++.++++..+|+..-.+-+.+..+. +-| .+. ...+.-+..+..++-+++++|++|++++-.-..
T Consensus 3 ~~E~~k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 3 VHELKKFLPLFLMFFCILFNYTILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 34567888898999999999988877766653321 111 111 111111222235667999999999998877666
Q ss_pred HHHHHHHhh---hcch--h---------------------------hHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhh
Q 013645 98 GYWLFVAAN---LFPS--W---------------------------YTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (439)
Q Consensus 98 ~~~~~~~~~---~~~~--~---------------------------~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~ 145 (439)
.+..+.+.+ +.|+ . +..-+..+...+-.....+ .--|+.
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS---------~lFW~f 153 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLS---------LLFWGF 153 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHH---------HHHHHH
Confidence 554433321 1111 0 0000011111111111111 011333
Q ss_pred hcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCC---CCCCCCcchHH---HHHHHHHHHHHHHHHHhccC-CCc
Q 013645 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD---KGGSTSGTTLL---FIVFLGVITLGTILMCFLRK-EED 218 (439)
Q Consensus 146 ~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~---~~~~~~w~~~~---~~~~~~~~~l~~~~~~~l~~-~~~ 218 (439)
.+|.++++|-.|.++++.++.++|.++|+.+...+.+.. +.+...|.... ..+..++..+...+...+.+ ..+
T Consensus 154 andi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~ 233 (472)
T TIGR00769 154 ANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLT 233 (472)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 444457788889999999999999999998776665311 11111232211 11112222222222233322 111
Q ss_pred ccc---ccccccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhcccccc----cchHHHHH
Q 013645 219 KGE---KETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV----SGVGGAMA 291 (439)
Q Consensus 219 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~ 291 (439)
.++ .+.++++.++..+..+ +.+.++++|..+.+..+.++.+....+....+-..+.+..-+. +-.|.+..
T Consensus 234 ~~~~~~~~~~~~k~k~k~~~~e---s~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~ 310 (472)
T TIGR00769 234 DPRSYNPALKEKKVKPKMSTME---SLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFST 310 (472)
T ss_pred CccccchhhccccCCCCCCHHH---HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 111 0000001111112222 3445778888877776666666655443221111111111111 12344455
Q ss_pred HHHHHHHHHHHhhhhhhcCCCCc
Q 013645 292 VYGAFDAICSLAAGRLTTGLPSI 314 (439)
Q Consensus 292 ~~~i~~~ig~~~~G~l~d~~~~r 314 (439)
..++..++..++.+++.+|.|-+
T Consensus 311 ~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 311 WTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHH
Confidence 66777777777779999998855
No 210
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.48 E-value=7e-06 Score=82.38 Aligned_cols=110 Identities=8% Similarity=0.021 Sum_probs=77.4
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhcc-C--CCCccchHHHHHHHHHHh
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYS-V--TSGVLGTLYPLIMAALLG 356 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~l~G 356 (439)
+++.++.+...+.+.++..+++++.|++.||+|.|+.+ ..+.++..+... ...+. + ..+ +..+++..++.|
T Consensus 66 ~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~-~~~~ll~~i~~~--~~~~a~~~~~~s---~~~lli~r~l~G 139 (462)
T PRK15034 66 NFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT-VFSTAILIIPCV--WLGIAVQNPNTP---FGIFIVIALLCG 139 (462)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH-HHHHHHHHHHHH--HHHHHHcccCCC---HHHHHHHHHHHH
Confidence 45566788888888999999999999999999988744 455555443322 22332 1 112 467888899999
Q ss_pred hhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHH
Q 013645 357 IGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVV 396 (439)
Q Consensus 357 ~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~ 396 (439)
++ +...+.....+++.+|+++ +.+.|++....++|..++
T Consensus 140 ig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~ 179 (462)
T PRK15034 140 FA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVM 179 (462)
T ss_pred HH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHH
Confidence 97 6677788888999999774 568887755555555543
No 211
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.48 E-value=2.8e-06 Score=82.09 Aligned_cols=145 Identities=12% Similarity=0.090 Sum_probs=109.2
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhh
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
+++.++.|.+.+.+.+.-.++.++.|.++||.+.|. ++..|+++.+++.+ ++.+.++ ..++.+...+-|+.+
T Consensus 60 ~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~-fm~~gLilsai~ni--l~Gfs~s-----~~~~~~l~~lng~fQ 131 (448)
T COG2271 60 GLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY-FMAFGLILSAIVNI--LFGFSPS-----LFLFAVLWVLNGWFQ 131 (448)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce-eehHHHHHHHHHHH--HHhhhhH-----HHHHHHHHHHHHHHh
Confidence 477788999999999999999999999999999876 44577777776543 4566543 356778888899999
Q ss_pred hhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHh--h----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013645 360 GVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIG--P----YISLQAMLIVMVVGICVALVGILFLTIQVEK 432 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
+...|.....++.-+|+++ ++..|+.|...++|.++.+.+. . ..++...++.-.++.++..+..+++-+.-++
T Consensus 132 g~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 132 GMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred cCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 9999999999999998765 4578888888888776654443 2 2367778877777766666666555543333
No 212
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.48 E-value=2.9e-06 Score=96.04 Aligned_cols=113 Identities=16% Similarity=0.076 Sum_probs=81.7
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHH-HhhccCCCCccchHHHHHHHHHHhhhhhhhh
Q 013645 285 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVTSGVLGTLYPLIMAALLGIGDGVLN 363 (439)
Q Consensus 285 ~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 363 (439)
..+.+..++.++.++++++.|+++||+|||+.+ +.+.++..+..... +....++ +..+++..++.|++.+...
T Consensus 48 ~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l-~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~r~l~G~~~~~~~ 121 (1146)
T PRK08633 48 LTAIVNALFLLPFLLLSSPAGFLADKFSKNRVI-RIVKLFEVGLTLLIVLAYYLGW-----FWLAFAVTFLLGAQSAIYS 121 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhhHhhhcccccHHHHH-HHHHHHHHHHHHHHHHHHHHcc-----HHHHHHHHHHHHHHHHhhc
Confidence 356667788899999999999999999988744 44444433221111 1112212 3567788889999999999
Q ss_pred hhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhhhh
Q 013645 364 TQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPYI 403 (439)
Q Consensus 364 ~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~~~ 403 (439)
+..++++.+.+|++++ .+.|.+....++|.++++.+.+.+
T Consensus 122 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l 162 (1146)
T PRK08633 122 PAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFL 162 (1146)
T ss_pred hHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988754 578888888888888777666543
No 213
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.47 E-value=2.1e-06 Score=87.44 Aligned_cols=140 Identities=12% Similarity=-0.022 Sum_probs=93.5
Q ss_pred ccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhcc-------CCCCccchHHHHHHHH
Q 013645 281 LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYS-------VTSGVLGTLYPLIMAA 353 (439)
Q Consensus 281 ~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 353 (439)
.+.++.++....+.++.++++++.|+++||+|||+.+ ..+.++..++... ..+. .+.+......+++.-+
T Consensus 52 ~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~-~~~~~l~~i~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~R~ 128 (479)
T PRK10077 52 AANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL-KIAAVLFFISALG--SAWPEFGFTSIGPDNTGYVPEFVIYRI 128 (479)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHHHHHHHHHHH--HHhhccccccccccchhHHHHHHHHHH
Confidence 3445678888999999999999999999999999854 4555554443221 1111 0111001234567789
Q ss_pred HHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhh------------hhhHHHHHHHHHHHHHHHH
Q 013645 354 LLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP------------YISLQAMLIVMVVGICVAL 420 (439)
Q Consensus 354 l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~------------~~~~~~~~~~~~~~~~~~~ 420 (439)
+.|++.+...+...++++|.+|++++ .+.+..+....+|..+++.+.. ..++++.+++..+..++..
T Consensus 129 l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 208 (479)
T PRK10077 129 IGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL 208 (479)
T ss_pred HHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999997754 5677777777777766554321 2356667766555554444
Q ss_pred HHH
Q 013645 421 VGI 423 (439)
Q Consensus 421 ~~~ 423 (439)
+..
T Consensus 209 ~~~ 211 (479)
T PRK10077 209 MLL 211 (479)
T ss_pred HHH
Confidence 433
No 214
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.46 E-value=1.4e-06 Score=91.80 Aligned_cols=120 Identities=17% Similarity=0.076 Sum_probs=88.3
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccC--------------------
Q 013645 279 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV-------------------- 338 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~-------------------- 338 (439)
.+++.++.|.+.+.+.++.+++.++.+++.||.+||+.+ .++.++.+++.+ +...++
T Consensus 63 F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i-~~g~ll~~lg~l--l~alphf~~~~y~~~~~~~~~~~~~~ 139 (633)
T TIGR00805 63 FKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI-GIGCAIMGLGSF--LLSLPHFLSGRYSYSTTVSSTGNLSS 139 (633)
T ss_pred hCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE-EecHHHHHHHHH--HHhChHHhcCCccccccccccccccc
Confidence 345666788888899999999999999999999988744 567666655432 122221
Q ss_pred --------C-----------------CC-ccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHH
Q 013645 339 --------T-----------------SG-VLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCA 391 (439)
Q Consensus 339 --------~-----------------~~-~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~ 391 (439)
+ .+ ...+..++++-++.|+|.+...+...+++.|.+|++++ .+.|+++....+
T Consensus 140 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~i 219 (633)
T TIGR00805 140 ANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVF 219 (633)
T ss_pred cccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHh
Confidence 0 00 00124566789999999999999999999999988765 467888888888
Q ss_pred HHHHHHHHhh
Q 013645 392 SIAVVFFIGP 401 (439)
Q Consensus 392 g~~i~~~i~~ 401 (439)
|.++++.+.+
T Consensus 220 G~~lG~llgg 229 (633)
T TIGR00805 220 GPAFGYLLGS 229 (633)
T ss_pred hhHHHHHHHH
Confidence 8888876653
No 215
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.44 E-value=1.4e-05 Score=78.60 Aligned_cols=130 Identities=11% Similarity=0.089 Sum_probs=88.5
Q ss_pred HHHhhhhhHHHHHHHhchhHHHHHHhHHHHH-HHHhhhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCC
Q 013645 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWL-FVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (439)
Q Consensus 71 ~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~-~~~~~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~ 149 (439)
.-+..-.+++++.+|+|.|+.++++..+.++ ...+...++.+.+.+.+.++|+..+....+...|+++..
T Consensus 271 ~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~f--------- 341 (412)
T PF01306_consen 271 LEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHF--------- 341 (412)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---------
T ss_pred HHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------
Confidence 3344556799999999999999999988877 455567888888889999999999999999999999997
Q ss_pred CcccchhhhhHHH-HHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHh-ccCC
Q 013645 150 HEGTVIGSFNGEF-WGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF-LRKE 216 (439)
Q Consensus 150 ~~~~~rg~~~g~~-~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~-l~~~ 216 (439)
|++-..+...+. ....++|.++.+.+++.+..+. |.+. .|++.+.+.+...++..+ ++++
T Consensus 342 -d~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~-----G~~~-tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 342 -DKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI-----GFQH-TYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp --GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-----HHHH-HHHHHHHHHHHHHHHHHHHS--S
T ss_pred -CHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc-----CcHH-HHHHHHHHHHHHHHHheeeecCC
Confidence 444445555552 4555677777777777665432 2333 355556655555555444 5443
No 216
>PRK15075 citrate-proton symporter; Provisional
Probab=98.44 E-value=8.8e-06 Score=81.98 Aligned_cols=103 Identities=16% Similarity=0.021 Sum_probs=65.4
Q ss_pred HHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHH---hh--hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhh
Q 013645 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA---AN--LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (439)
Q Consensus 71 ~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~---~~--~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~ 145 (439)
...++++..|+++||+|||+++..+.+...+... .. ..++...+....++.|++.+...+....++.|..
T Consensus 286 ~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~----- 360 (434)
T PRK15075 286 SNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVM----- 360 (434)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHC-----
Confidence 3456778899999999999998876543222111 11 1233333333345566676666555556667765
Q ss_pred hcCCCcccchhhhhHHHHHHHH-HhhhhhhHHHHHhhcC
Q 013645 146 NHKLHEGTVIGSFNGEFWGMFA-SHQFVGNLITLAVLKD 183 (439)
Q Consensus 146 ~~~~~~~~~rg~~~g~~~~~~~-~G~~iG~~i~~~l~~~ 183 (439)
|+++||+.+|+...... ++..++|.+.+.+...
T Consensus 361 -----p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~ 394 (434)
T PRK15075 361 -----PAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV 394 (434)
T ss_pred -----CCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 88899999998644333 3466788777776554
No 217
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.42 E-value=2e-05 Score=78.21 Aligned_cols=119 Identities=14% Similarity=-0.050 Sum_probs=75.6
Q ss_pred HhhhhhHHHHHHHhchhHHHHHHhHHHHHHHH-hhh------cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhh
Q 013645 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVA-ANL------FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (439)
Q Consensus 73 ~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~-~~~------~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~ 145 (439)
.++.++.|++.||+|+|+.+..+.+...+... ... .++...++..-++.+++.+...+...+.+.+...
T Consensus 258 ~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---- 333 (390)
T TIGR02718 258 LLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAG---- 333 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence 34567899999999999999887664422111 111 1233333334455566666665655555555541
Q ss_pred hcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHH
Q 013645 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLG 206 (439)
Q Consensus 146 ~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~ 206 (439)
+++++|+.+++..+..++|..+|+.+++.+.+.. +++. .|....++.+++
T Consensus 334 -----~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~-----G~~~-~f~~~~~~~l~a 383 (390)
T TIGR02718 334 -----DGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF-----GYAG-GFLSGTVLAVLA 383 (390)
T ss_pred -----cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----ccHH-HHHHHHHHHHHH
Confidence 3478999999999999999999999998887542 3433 344444444443
No 218
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.41 E-value=1.2e-05 Score=81.01 Aligned_cols=132 Identities=11% Similarity=0.057 Sum_probs=68.6
Q ss_pred HHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHH--hh-h--cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhh
Q 013645 69 YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA--AN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (439)
Q Consensus 69 ~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~--~~-~--~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~ 143 (439)
.....+++++.|+++||+|||+++..+.++..+... .. . .++....+..-.+.+++.+...+....+++|.+
T Consensus 289 ~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~f--- 365 (432)
T PRK10406 289 LFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMF--- 365 (432)
T ss_pred HHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
Confidence 334456778889999999999988776654322221 11 1 122222221112222333333334456667776
Q ss_pred hhhcCCCcccchhhhhHHHHHHHHH-hhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCC
Q 013645 144 ASNHKLHEGTVIGSFNGEFWGMFAS-HQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (439)
Q Consensus 144 a~~~~~~~~~~rg~~~g~~~~~~~~-G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~ 216 (439)
|++.|++++|+.+...+. .....|.+...+.. .+ +|.. .++...+..+++.+..++++++
T Consensus 366 -------p~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~-~g----~~~~-~~~~~~~~~~i~~~~~~~l~~~ 426 (432)
T PRK10406 366 -------PAQVRALGVGLSYAVANALFGGSAEYVALSLKS-IG----META-FFWYVTLMAVVAFLVSLMLHRK 426 (432)
T ss_pred -------CCCccchhhhHHHHHHHHHHHhHHHHHHHHHHH-hC----CCcH-HHHHHHHHHHHHHHHHHHhhhc
Confidence 889999999997654433 22335555554422 11 1333 3333344444554444555443
No 219
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.35 E-value=2.7e-06 Score=86.53 Aligned_cols=138 Identities=10% Similarity=0.031 Sum_probs=96.3
Q ss_pred ccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhh
Q 013645 281 LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG 360 (439)
Q Consensus 281 ~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 360 (439)
.+.+..|.+...+.++.++++++.|++.||+++|+.+ ..+.++..+... +..+..+.+ ...+++.-++.|++.+
T Consensus 73 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l-~~~~~~~~~~~~--~~~~~~~~~---~~~l~~~r~~~G~~~~ 146 (465)
T TIGR00894 73 WSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSI-GIGMFLSSVISI--VIPWAAGGG---IALVVFCRVIQGLAQG 146 (465)
T ss_pred CCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhh-HHHHHHHHHHHH--HHHHHHHcC---chHHHHHHHHHHHhcc
Confidence 4455678888899999999999999999999988744 455555443322 111211111 2456778889999999
Q ss_pred hhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHHHHHHHHHH
Q 013645 361 VLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY-----ISLQAMLIVMVVGICVALVGIL 424 (439)
Q Consensus 361 ~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~-----~~~~~~~~~~~~~~~~~~~~~~ 424 (439)
...+....++.+.+|+++ +.+.+.++....+|..+++.+.+. .++...+++..+..++.++..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~ 216 (465)
T TIGR00894 147 SVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWF 216 (465)
T ss_pred cchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHH
Confidence 999999999999998765 457788888788888777655432 2556666666665554444433
No 220
>PRK09669 putative symporter YagG; Provisional
Probab=98.32 E-value=2.1e-05 Score=79.48 Aligned_cols=106 Identities=7% Similarity=0.003 Sum_probs=76.5
Q ss_pred hhhhhHHHHHHHhchhHHHHHHhHHHHHHHH-hhh--cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCC
Q 013645 74 CFSLVASLVVRVLGSKNALILGTTGYWLFVA-ANL--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLH 150 (439)
Q Consensus 74 ~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~-~~~--~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~ 150 (439)
++.++.+++.||+|+|+.+..+.++..+... ... .++...+++..++.|++.+...+...+.++|..+.... ..
T Consensus 279 i~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~---~~ 355 (444)
T PRK09669 279 FGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEK---RS 355 (444)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh---hc
Confidence 5567889999999999999888765543222 222 24566667778899999999999999999988742110 01
Q ss_pred cccchhhhhHHHHHHHHHhhhhhhHHHHHhhc
Q 013645 151 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (439)
Q Consensus 151 ~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~ 182 (439)
.+++.|..+|.+..+..+|..+|+.+++.+..
T Consensus 356 G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 356 GRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred CcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22345677788888889999999988877654
No 221
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.31 E-value=1.6e-06 Score=83.00 Aligned_cols=143 Identities=15% Similarity=0.156 Sum_probs=112.6
Q ss_pred ccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhh
Q 013645 283 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 362 (439)
Q Consensus 283 ~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 362 (439)
.+++|.++....+.+++.+.+.|.+.||+|+|.++ ++|+.+....-+ ++.+..+ +..++++=.+-|+|++..
T Consensus 105 ~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm-~~Gl~vmf~sTi--lFafg~s-----y~~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 105 NTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPM-VAGLFVMFLSTI--LFAFGNS-----YPMLFVARSLQGVGSAFA 176 (464)
T ss_pred ccchhHHHHHHHHHHHHhcccchhhHHHhccccHH-HHHHHHHHHHHH--HHHHcch-----hHHHHHHHHHhhhhHHHH
Confidence 35789999999999999999999999999988755 577776554432 4455533 478889999999999999
Q ss_pred hhhHHHHHHhhccCCch--hhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013645 363 NTQLSALLGILFKHDTE--GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGILFLTIQVEKA 433 (439)
Q Consensus 363 ~~~~~a~~~~~~p~~~~--~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
.+.-.++++|.||+|.+ .+.|..-.+-++|..+++-+++ ..++.+.|.++++++++.....+++-.+.+.+
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccC
Confidence 99999999999999874 4677666666777777765554 45888999999999998888877765554433
No 222
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.31 E-value=1.4e-05 Score=90.49 Aligned_cols=113 Identities=19% Similarity=0.024 Sum_probs=80.4
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhh
Q 013645 285 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 364 (439)
Q Consensus 285 ~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 364 (439)
..++...++.+..++.+++.|+++||++||+.+.........++...+.....++ ++.++++.++.|++.+...|
T Consensus 53 ~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s-----~~~l~~~~~l~gi~~a~~~p 127 (1140)
T PRK06814 53 LVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNS-----VPLLFAALFLMGIHSALFGP 127 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHhhch
Confidence 3566677888888999999999999999887432211111111111111112222 36778899999999999999
Q ss_pred hHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhh
Q 013645 365 QLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPY 402 (439)
Q Consensus 365 ~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~ 402 (439)
...+++.+.+|+++ +.+.|+.+...++|.++++.+.+.
T Consensus 128 ~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~ 166 (1140)
T PRK06814 128 IKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGL 166 (1140)
T ss_pred HHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999876 458898888888888888777654
No 223
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.31 E-value=5.3e-06 Score=81.97 Aligned_cols=143 Identities=23% Similarity=0.291 Sum_probs=104.3
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhcCC-CCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhh
Q 013645 285 GVGGAMAVYGAFDAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 363 (439)
Q Consensus 285 ~~g~~~~~~~i~~~ig~~~~G~l~d~~-~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 363 (439)
+..-.+..++.-.=+..+++|+++||+ |+|+.+ ..|+++.+++.. .+..++... ...+++..++.++|++...
T Consensus 62 ~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI-~lGail~~iGh~--~L~~~~~~~---~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 62 HATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI-VLGAILMAIGHL--VLAISSVSG---PGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH-HHHHHHHHHHHH--HHhcccccc---ccHHHHHHHHHHhcccccc
Confidence 333334445554456677889999996 666654 578888887754 234543111 3678888888999999999
Q ss_pred hhHHHHHHhhccCCc-h--hhHHHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013645 364 TQLSALLGILFKHDT-E--GAFAQLKVWQCASIAVVFFIGP----YISLQAMLIVMVVGICVALVGILFLTIQVEKA 433 (439)
Q Consensus 364 ~~~~a~~~~~~p~~~-~--~a~s~~~~~~~~g~~i~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
+....+++|++|++. + ++++++.+.-++|+.+++.+.+ ..++++.|...++.+.++.+.|+...+++...
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~ 212 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGI 212 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCC
Confidence 999999999998653 3 3678777777777777766654 45788999999999999999998888777554
No 224
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.28 E-value=6.7e-05 Score=72.01 Aligned_cols=107 Identities=14% Similarity=0.052 Sum_probs=73.7
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-hcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhh
Q 013645 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (439)
Q Consensus 64 ~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~ 142 (439)
..+.+...++++.+..+++.||+|+|+.+..+..+.++..... ..++...++ .-.+.|++.+..+|...+...+..
T Consensus 183 ~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~~-~~~l~g~~~s~i~P~~~s~a~~~~-- 259 (310)
T TIGR01272 183 FTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAMW-FVLALGLFNSIMFPTIFSLALNAL-- 259 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhh--
Confidence 3556666778899999999999999999888776655544332 223332222 345789999999988766655543
Q ss_pred hhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcC
Q 013645 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (439)
Q Consensus 143 ~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~ 183 (439)
+++.+++.++. .+..+|..++|++.+.+...
T Consensus 260 ---------~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~ 290 (310)
T TIGR01272 260 ---------GRHTSQGSGIL-CLAIVGGAIVPLLQGSLADC 290 (310)
T ss_pred ---------hhhhhhhHHHH-HHHHhcchHHHHHHHHHHHh
Confidence 34556777775 56678889999876666543
No 225
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.26 E-value=2.1e-05 Score=80.96 Aligned_cols=141 Identities=16% Similarity=0.134 Sum_probs=88.2
Q ss_pred cccccc-chHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhh
Q 013645 279 PALGVS-GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 357 (439)
Q Consensus 279 ~~~~~~-~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 357 (439)
.++|.+ +..++.....++..++.++.|+++|.+|||. +++.+.++..++.+ ...-.++ ....+....+.|+
T Consensus 72 ~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~-~~i~g~~l~vvG~I--v~atA~~-----~~~~iag~~l~Gv 143 (599)
T PF06609_consen 72 ADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRY-FFIIGSLLGVVGSI--VCATAQN-----MNTFIAGMVLYGV 143 (599)
T ss_pred HhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchH-HHHHHHHHHHhHHH--HhhcCCc-----HHHHHHHHHHHHH
Confidence 345543 4566677888999999999999999999887 44566666666643 2233322 2456778899999
Q ss_pred hhhhhhhhHHHHHHhhccCCchh-hHHHHHHHHHH----HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 358 GDGVLNTQLSALLGILFKHDTEG-AFAQLKVWQCA----SIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTI 428 (439)
Q Consensus 358 ~~~~~~~~~~a~~~~~~p~~~~~-a~s~~~~~~~~----g~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (439)
+.+... .....++|+.|++.|. ..+........ +..++-.+....+++|.+++......++++...+..+
T Consensus 144 gaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~ 218 (599)
T PF06609_consen 144 GAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYF 218 (599)
T ss_pred hhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhC
Confidence 865554 5566789999987653 22222221111 2222222233447888887777766666655544443
No 226
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.23 E-value=1.6e-05 Score=75.53 Aligned_cols=120 Identities=18% Similarity=0.196 Sum_probs=86.8
Q ss_pred hhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh---hcchhh--HHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcC
Q 013645 74 CFSLVASLVVRVLGSKNALILGTTGYWLFVAAN---LFPSWY--TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (439)
Q Consensus 74 ~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~---~~~~~~--~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~ 148 (439)
-+.++.+++.||+|||++|..+.+.++++.+.. ..+|.. ++..+|++.- +.+.+.+.|..|+.
T Consensus 396 PGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis----g~fqvaYvYtPEVy-------- 463 (528)
T KOG0253|consen 396 PGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS----GAFQVAYVYTPEVY-------- 463 (528)
T ss_pred CchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh----chheEEEEecCccc--------
Confidence 467899999999999999999999988877652 234443 2334565543 33455677777776
Q ss_pred CCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccC
Q 013645 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (439)
Q Consensus 149 ~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~ 215 (439)
|.+-|+...|....+.-+|+++.|.++.....+ ..+.-.++.++.+++.+..+++|-
T Consensus 464 --PTavRatgvGtcSsmaRIggI~~p~iA~~~e~s--------~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 464 --PTAVRATGVGTCSSMARIGGIFSPVIAMRAELS--------TSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred --chhhhhcchhhhhhHHhhhhhhhhHHHHHhccc--------eeehHHHHHHHHHHHHHHheeeee
Confidence 889999999999999999999999988322211 122244677878888777777773
No 227
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.23 E-value=0.0013 Score=62.95 Aligned_cols=348 Identities=14% Similarity=0.106 Sum_probs=149.9
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHHHHHHHHHHHhhh--hhHHHHHH-----HhchhHHHHHHh-
Q 013645 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFS--LVASLVVR-----VLGSKNALILGT- 96 (439)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~--~~~g~l~d-----r~G~r~~l~~g~- 96 (439)
+..+++..+....+.--+.+.-.. ..|.+.+..+....+.+++...+.-.+ +.+.+++| |+||||..++=.
T Consensus 28 ~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q 106 (510)
T KOG3574|consen 28 GDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQ 106 (510)
T ss_pred hhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceeeehH
Confidence 345566555444443333332222 445555555666666666655554333 57888888 999999874432
Q ss_pred HHHHHHHH--hhh----------cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHH
Q 013645 97 TGYWLFVA--ANL----------FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWG 164 (439)
Q Consensus 97 ~~~~~~~~--~~~----------~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~ 164 (439)
.+.+.+.. +.. .|+-..+-..-++.-+.++....+.....-..- ++++.|-+......
T Consensus 107 ~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmL----------s~e~lgyaST~q~V 176 (510)
T KOG3574|consen 107 YLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTML----------SRENLGYASTCQSV 176 (510)
T ss_pred HHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhc----------CHhhcCchhHHHHH
Confidence 12122211 111 122211111223444555555555444333232 56777777766666
Q ss_pred HHHHhhhhhhHHHHHhhcC---------CC--CCCCCcchHHHHHHHHHHHHHHHHHHhccCCCccccccccccchhhhh
Q 013645 165 MFASHQFVGNLITLAVLKD---------DK--GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYS 233 (439)
Q Consensus 165 ~~~~G~~iG~~i~~~l~~~---------~~--~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 233 (439)
+.+.|..+|+.+-..+... .+ ++-..-.. +++..+.+.+++..+..+.++++++..++ |. ..
T Consensus 177 g~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~g-y~~fwg~~~~vat~Lv~~~kke~~~~~~~--e~----~~ 249 (510)
T KOG3574|consen 177 GQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAG-YLWFWGALFIVATTLVALLKKENDESVDE--EL----EL 249 (510)
T ss_pred HHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhH-HHHHHHHHHHHHHHHHHHhcCCCchhhhh--hh----hc
Confidence 6666666665443222210 00 00000001 11122333334443333444332221111 11 11
Q ss_pred hHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHh--hcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCC
Q 013645 234 YLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWA--EFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL 311 (439)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~ 311 (439)
..++..+-..+++|-|.+..+..... ++ -.+|.-+ ..+--+.++++..+..+.+....-..+++.....|+++.+-
T Consensus 250 ~i~~~yk~l~~vLklk~v~~la~i~l-t~-K~gf~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~ 327 (510)
T KOG3574|consen 250 GIHESYKLLRDVLKLKSVRWLAGILL-TG-KLGFQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGP 327 (510)
T ss_pred CHHHHHHHHHHHHcCccHHHHHHHHH-HH-HHHhhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCC
Confidence 22222333456677777765543222 11 1122211 12211233455444444443333444555556666655321
Q ss_pred CC-----cceehhhHHHHHHHHHHHHHhhccC-CCCc-cc-hHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchh-hH
Q 013645 312 PS-----ITFIVSGGAIAQVVVFLWILINYSV-TSGV-LG-TLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG-AF 382 (439)
Q Consensus 312 ~~-----r~~~~~~g~~~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~-a~ 382 (439)
.. |....-++.........+..-.+.. +... .. +.+.+....+.+...........+..+++.|++-++ .+
T Consensus 328 ~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTym 407 (510)
T KOG3574|consen 328 RPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYM 407 (510)
T ss_pred CcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHH
Confidence 10 1111111111111111111111111 1111 01 122333455555555555556677888888777654 56
Q ss_pred HHHHHHHHHH
Q 013645 383 AQLKVWQCAS 392 (439)
Q Consensus 383 s~~~~~~~~g 392 (439)
.+.|-..++|
T Consensus 408 TlLNTLsnLG 417 (510)
T KOG3574|consen 408 TLLNTLSNLG 417 (510)
T ss_pred HHHHHHHHhc
Confidence 7888877765
No 228
>PTZ00207 hypothetical protein; Provisional
Probab=98.21 E-value=4.8e-05 Score=78.66 Aligned_cols=139 Identities=10% Similarity=0.038 Sum_probs=87.3
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCC--CCccchHHHHHHHHHHhh
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVT--SGVLGTLYPLIMAALLGI 357 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~G~ 357 (439)
+++.++.+.+..+ +.......++.|++.||+|+|+. +.++.++..++..+..+..... .+ .+.+++..++.|+
T Consensus 58 gls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R~v-llig~ll~~iG~ll~ala~~~~i~~s---~~~l~l~r~l~G~ 132 (591)
T PTZ00207 58 NLTQRDLSTITTV-GIAVGYFLLPYSFIYDYLGPRPI-FVLSMTVFCLGTLLFALTFQEVIEGS---VVRLSVYNGLMTL 132 (591)
T ss_pred CcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcHHH-HHHHHHHHHHHHHHHHHHhcccccCc---HHHHHHHHHHHHH
Confidence 3444455655443 33334556678999999998874 4567776666543222221110 11 3556777788899
Q ss_pred hhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHH-HHHHhhhh--hHHHHHHHHHHHHHHHHHHH
Q 013645 358 GDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAV-VFFIGPYI--SLQAMLIVMVVGICVALVGI 423 (439)
Q Consensus 358 ~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i-~~~i~~~~--~~~~~~~~~~~~~~~~~~~~ 423 (439)
+.+...+.....+.+.+|++++.+.|+.+....+|.++ +.+..... ++...++.++++.++.++..
T Consensus 133 G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~ 201 (591)
T PTZ00207 133 GCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILA 201 (591)
T ss_pred HHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 98888888888889999988887889988888888864 44333322 44455555555444443333
No 229
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.20 E-value=0.00015 Score=72.20 Aligned_cols=153 Identities=14% Similarity=0.007 Sum_probs=101.8
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCch--H---HHHHHHHHH-HhhhhhHHHHHHHhchhHHHHHHhHHH
Q 013645 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGT--I---SLGILYTSF-TCFSLVASLVVRVLGSKNALILGTTGY 99 (439)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~--~---~~~~~~~~~-~~~~~~~g~l~dr~G~r~~l~~g~~~~ 99 (439)
..|.++.+.+..++.+.+++....+.....+ ..+|. . .....+.+. .++.++.+++.+|+|+|+++..+.+++
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~-y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~ 312 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYVT-YVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLL 312 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeEE-EEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHH
Confidence 5566777777777777777655444332211 11111 1 112222222 334678999999999999999999888
Q ss_pred HHHHHhh-hc--chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHH
Q 013645 100 WLFVAAN-LF--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI 176 (439)
Q Consensus 100 ~~~~~~~-~~--~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i 176 (439)
++..+.. +. ++...++++.++.++|.+..++..-+.++|..+..... ...++-|...|....+.-+|.++|..+
T Consensus 313 ~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~---TG~R~eGi~~s~~tF~~K~g~ala~~~ 389 (467)
T COG2211 313 AVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWK---TGVRREGIVYSGMTFFRKLGLALAGFI 389 (467)
T ss_pred HHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHH---hCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 7765553 33 46778888899999999998888888888887543211 123445777777777778888888877
Q ss_pred HHHhhc
Q 013645 177 TLAVLK 182 (439)
Q Consensus 177 ~~~l~~ 182 (439)
.+++..
T Consensus 390 ~g~~L~ 395 (467)
T COG2211 390 PGWILG 395 (467)
T ss_pred HHHHHH
Confidence 666654
No 230
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.16 E-value=3.1e-05 Score=78.94 Aligned_cols=109 Identities=9% Similarity=-0.073 Sum_probs=76.1
Q ss_pred HHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh-----h-cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhh
Q 013645 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-----L-FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (439)
Q Consensus 71 ~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~-----~-~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a 144 (439)
...++.++.+++.||+|+|+.+..+..+..+..+.. . .++...+++.-++.|++.+..++...++++|..+...
T Consensus 278 ~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e 357 (473)
T PRK10429 278 ANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGE 357 (473)
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 344566788999999999999987776544322221 1 2345555667788999999999888899998875321
Q ss_pred hhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhc
Q 013645 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (439)
Q Consensus 145 ~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~ 182 (439)
. ....++.|..+|.......+|..+|+.+.+.+..
T Consensus 358 ~---~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 358 Y---KLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred H---hcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0122334668888888888999999888776653
No 231
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.15 E-value=0.00015 Score=66.65 Aligned_cols=97 Identities=15% Similarity=0.131 Sum_probs=61.7
Q ss_pred hhhhHHHHHHHhchhHHHHHHhHHHHH-HHHhh-----hc--chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhh
Q 013645 75 FSLVASLVVRVLGSKNALILGTTGYWL-FVAAN-----LF--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (439)
Q Consensus 75 ~~~~~g~l~dr~G~r~~l~~g~~~~~~-~~~~~-----~~--~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~ 146 (439)
..+++|.+.|++|++.++.+|.....+ +.... .. ++.+.+.+...+.|.+.+...++ ++++..-+
T Consensus 52 ~G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta--~lvt~~~N----- 124 (250)
T PF06813_consen 52 FGILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTA--SLVTCVRN----- 124 (250)
T ss_pred ccHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhH--HHHHHHHh-----
Confidence 358899999999999999988875333 22211 11 35556555566666665544343 33332211
Q ss_pred cCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhc
Q 013645 147 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (439)
Q Consensus 147 ~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~ 182 (439)
.|++||++.|+.-....++..+=..+...+..
T Consensus 125 ----FP~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 125 ----FPRSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred ----CccccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 45799999999999998886665544444433
No 232
>PRK11462 putative transporter; Provisional
Probab=98.12 E-value=0.00013 Score=74.21 Aligned_cols=109 Identities=9% Similarity=-0.087 Sum_probs=66.1
Q ss_pred HHHhhhhhHHHHHHHhchhHHHHHHhHHHHH-HHHhhhcc--hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhc
Q 013645 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWL-FVAANLFP--SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (439)
Q Consensus 71 ~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~-~~~~~~~~--~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~ 147 (439)
...++.++++++.||+|+|+++..+.....+ .......+ +...+++.-++.|++.+...+...+.++|..+.....
T Consensus 275 ~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~- 353 (460)
T PRK11462 275 GNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWC- 353 (460)
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHh-
Confidence 3345667899999999999987655443322 22222222 2223333446678887776666677788887532110
Q ss_pred CCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhc
Q 013645 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (439)
Q Consensus 148 ~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~ 182 (439)
..+++.|..++.......+|..+|+.+++.+..
T Consensus 354 --tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 354 --NGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred --cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122333555676667788899999887776653
No 233
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.08 E-value=6.9e-05 Score=74.58 Aligned_cols=192 Identities=12% Similarity=0.091 Sum_probs=128.6
Q ss_pred HHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCccee
Q 013645 238 LSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFI 317 (439)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~ 317 (439)
.+.+..+++.+++...++...+..|...+++.+.+-=++.+.+....--|.+.+..-.++++.-++.+|+.+|+|+-+.+
T Consensus 360 v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~ 439 (618)
T KOG3762|consen 360 VLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM 439 (618)
T ss_pred HHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee
Confidence 34456678888887765554444554443332211001111111122335555666677888888899999999977644
Q ss_pred hhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCch-hhHHHHH-----HHHHH
Q 013645 318 VSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLK-----VWQCA 391 (439)
Q Consensus 318 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~-----~~~~~ 391 (439)
..++.++.+=++ ++.+..+ +|..+-+-++-|+..++.+..+-++++...|++.+ ++.++.+ +..++
T Consensus 440 -~lgLa~~~~Rf~--~~S~L~n-----~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~ 511 (618)
T KOG3762|consen 440 -YLGLACNVGRFL--YYSYLQN-----PWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGL 511 (618)
T ss_pred -eehhhHHHHHHH--HHHHhcC-----chheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcch
Confidence 466666665554 3344434 25566778888999999999999999999998854 4444333 33367
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Q 013645 392 SIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEKAFYSP 437 (439)
Q Consensus 392 g~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (439)
|+.+|-.+...++....+.++++.+++.++.+..+.+..+|++..+
T Consensus 512 GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~l~~~~~i~ 557 (618)
T KOG3762|consen 512 GSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLLLKRRGFIK 557 (618)
T ss_pred hhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhhhccccccC
Confidence 8888887778888889999999999999999999998887775544
No 234
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.06 E-value=0.0001 Score=71.52 Aligned_cols=145 Identities=17% Similarity=0.144 Sum_probs=96.9
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHH-HHHHHHhhccC-CCCccchHHHHHHHHHHh
Q 013645 279 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVV-VFLWILINYSV-TSGVLGTLYPLIMAALLG 356 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~l~G 356 (439)
.+++.++.+++.+...+...+.+++.|.+.||+|.|+. .+.+.++.++ ++. ..+.. +++ ++.++++..+.|
T Consensus 44 ~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~-~~~s~~l~~IP~~~---~~~a~~~~~---~~~ll~~gll~G 116 (417)
T COG2223 44 FGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKW-TILSMLLLLIPCLG---LAFAVTYPS---TWQLLVIGLLLG 116 (417)
T ss_pred cCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHH-HHHHHHHHHHHHHH---HHHHccCCc---hHHHHHHHHHHh
Confidence 34666789999999999999999999999999998874 3455555432 322 12221 221 245777888889
Q ss_pred hhhhhhhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhh----hhh---HHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 357 IGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP----YIS---LQAMLIVMVVGICVALVGILFLTI 428 (439)
Q Consensus 357 ~~~~~~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 428 (439)
++.+. ...-.+.++..||+++ +.|.|++- ..|+|.++.-++.| ... ++....+..+.+++.++.+++..+
T Consensus 117 ~~Gas-Fav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 117 LAGAS-FAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred cccce-ehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 87655 4455677889999886 56778776 66666665443433 334 556667777777777777776655
Q ss_pred HHhh
Q 013645 429 QVEK 432 (439)
Q Consensus 429 ~~~~ 432 (439)
..++
T Consensus 195 d~p~ 198 (417)
T COG2223 195 DVPE 198 (417)
T ss_pred CChh
Confidence 4443
No 235
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.02 E-value=2.6e-05 Score=74.43 Aligned_cols=111 Identities=14% Similarity=0.103 Sum_probs=75.2
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhh
Q 013645 285 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 364 (439)
Q Consensus 285 ~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 364 (439)
..|++...+++++.+.+..+|.++||+|||. ++..++...++.+. .|.-+.+ +..+.+.=++.|+..+. .+
T Consensus 69 yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkp-vll~c~~~va~s~l----l~~~S~~---F~afv~aR~l~Gi~kgn-l~ 139 (451)
T KOG2615|consen 69 YAGFLGSSFSILQFISSPLWGCLSDRYGRKP-VLLACLIGVALSYL----LWALSRN---FAAFVLARFLGGIFKGN-LS 139 (451)
T ss_pred hhhhHhhHHHHHHHHhhhhhhhhhhhhCchH-HHHHHHHHHHHHHH----HHHHHHH---HHHHHHHHHhhhhccCc-hH
Confidence 4688888999999999999999999999886 44455554444321 2332222 22233346777776654 45
Q ss_pred hHHHHHHhhccCCc-hhhHHHHHHHHHHHHHHHHHHhhhhh
Q 013645 365 QLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYIS 404 (439)
Q Consensus 365 ~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i~~~i~~~~~ 404 (439)
...++++|+++++. ..++|......++|..+||.+++++.
T Consensus 140 v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla 180 (451)
T KOG2615|consen 140 VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLA 180 (451)
T ss_pred HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHH
Confidence 78899999997754 34677666666677777776665543
No 236
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.01 E-value=5.9e-05 Score=77.74 Aligned_cols=129 Identities=13% Similarity=0.139 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhh
Q 013645 286 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ 365 (439)
Q Consensus 286 ~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~ 365 (439)
.+.+.....+++.+++++.|+++|++|||..+ +.+.+.+.++.+ .....++ ...+.++-++.|+|.+.....
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l-~~~~~~~~iG~i--i~~~a~~-----~~~l~~GR~l~G~g~G~~~~~ 162 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTL-LLAVVLFLIGAI--IIALAPS-----WYQLIVGRILTGLGVGGASVL 162 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHH--HHHHhhh-----HHHHHHHHHHhccchhhhhhc
Confidence 47888899999999999999999999998755 466666665543 3345443 367889999999999999999
Q ss_pred HHHHHHhhccCCchhh-HHHHHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHHHHHHHHH
Q 013645 366 LSALLGILFKHDTEGA-FAQLKVWQCASIAVVFFIGPYI-----SLQAMLIVMVVGICVALVG 422 (439)
Q Consensus 366 ~~a~~~~~~p~~~~~a-~s~~~~~~~~g~~i~~~i~~~~-----~~~~~~~~~~~~~~~~~~~ 422 (439)
.+.+++|+.|++.|.. .+.+++...+|..+++.++... +++..+.+..+..++-.+.
T Consensus 163 ~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 163 APVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG 225 (513)
T ss_pred chhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence 9999999999976654 4677777778888887666544 4665665555555554444
No 237
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.99 E-value=9.4e-05 Score=75.61 Aligned_cols=172 Identities=13% Similarity=0.076 Sum_probs=115.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhhccC----CCCchHHHHHHHHHHHhhhhhHHHHHHHhch--hHHHHHHhHHHHH
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTE----GNLGTISLGILYTSFTCFSLVASLVVRVLGS--KNALILGTTGYWL 101 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~g~~~~~~~~~~~~~~~~~~g~l~dr~G~--r~~l~~g~~~~~~ 101 (439)
+.++.++++..+...++.......+...++ .+.....++++-....++.+..|+++|+... +.+..++.+..++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 466777777777777776655444443332 1222234566666777888999999999993 3344555554444
Q ss_pred HHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHh
Q 013645 102 FVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (439)
Q Consensus 102 ~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l 180 (439)
..+. ...+++..++...++.|+..|.......-.+.|.. ..++-..+.|+...+..++..+||++.+.+
T Consensus 378 ~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~----------g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~ 447 (509)
T KOG2504|consen 378 ARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLV----------GLEKLSNAYGLLLLFQGIGALVGPPIAGLL 447 (509)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------ChhhcchHHHHHHHHhHHHHHcCcccceee
Confidence 4332 35678888888999999999988777666677776 678889999999999999999999998855
Q ss_pred hcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhcc
Q 013645 181 LKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (439)
Q Consensus 181 ~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~ 214 (439)
....+ +|...+| ..+++.+++....++.+
T Consensus 448 ~d~tg----~Y~~~f~-~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 448 YDITG----NYDHAFY-FCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeccC----Ceeeehh-hcChHHHHHHHHHHHhH
Confidence 43222 2444333 34555555554444444
No 238
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.98 E-value=8.3e-05 Score=74.04 Aligned_cols=140 Identities=16% Similarity=0.076 Sum_probs=101.9
Q ss_pred ccccccc-hHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhh
Q 013645 279 PALGVSG-VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 357 (439)
Q Consensus 279 ~~~~~~~-~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 357 (439)
.+++.++ .|.+..++..+-++..++.|+++||+|.|+. +..+.+...+... +..+..+ ...+.++-+++|+
T Consensus 56 lglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~v-L~l~~l~Wsl~t~--L~~fa~S-----l~~L~i~R~llGv 127 (511)
T TIGR00806 56 LNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPV-LVLQALSFVCVWL--LLLLGTS-----VWHMQLMEVFYSV 127 (511)
T ss_pred cCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHH-HHHHHHHHHHHHH--HHHHHHH-----HHHHHHHHHHHHH
Confidence 4566677 8889999999999999999999999998874 4455555444332 3344432 3567889999999
Q ss_pred hhhhhhhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhhh------hhHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 358 GDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPY------ISLQAMLIVMVVGICVALVGILFLT 427 (439)
Q Consensus 358 ~~~~~~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (439)
+.+... ....++...+|++++ .+.|..+....+|.+++..+.+. .++....++..+..+++.+.-+++-
T Consensus 128 aEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 128 TMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999988 889999999987754 58899999988888877655432 2444445566666666666655543
No 239
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.95 E-value=0.00014 Score=73.98 Aligned_cols=104 Identities=10% Similarity=-0.020 Sum_probs=81.4
Q ss_pred HHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhh--h---------cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHH
Q 013645 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN--L---------FPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (439)
Q Consensus 71 ~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~--~---------~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~ 139 (439)
...++....+++.+|++.|+++.++.+.+.+..... . .++...++...++.+++.+..+.....++++.
T Consensus 300 ~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~ 379 (468)
T TIGR00788 300 GSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARL 379 (468)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHh
Confidence 334556677888899999999999998776644321 1 13433445567889999999988888888888
Q ss_pred hhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCC
Q 013645 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (439)
Q Consensus 140 ~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~ 184 (439)
. |++++|..++++.+..++|..+|+.+++.+.+..
T Consensus 380 ~----------p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 380 C----------PSGCESSVFALLASILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred C----------CCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7 8899999999999999999999999888887654
No 240
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.94 E-value=0.00017 Score=69.65 Aligned_cols=140 Identities=17% Similarity=0.103 Sum_probs=93.8
Q ss_pred HHHHHHhhHHHHHHHhhcchhhh-cccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHH
Q 013645 255 IPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL 333 (439)
Q Consensus 255 ~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~ 333 (439)
..+|+..|+..... ..+.+.+. ..+++..+.+.+...+-.+-.++++..|++.+|+|.|+.+ +.|+.+++++..
T Consensus 19 t~lFfl~G~~~~l~-diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi-~lgL~l~avg~~--- 93 (422)
T COG0738 19 TSLFFLWGFITCLN-DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGI-VLGLLLYAVGAA--- 93 (422)
T ss_pred HHHHHHHHHHhhcc-hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHH-HHHHHHHHHHHH---
Confidence 33455556544322 12222221 1345556777777777788888999999999999988755 578888877642
Q ss_pred hhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHHh
Q 013645 334 INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIG 400 (439)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~-a~s~~~~~~~~g~~i~~~i~ 400 (439)
+.|+... ...+...+.+.++.|.|-+..++.-+.+++.+.|++.++ -..+.+.+..+|+.+++.+.
T Consensus 94 lF~pAa~-~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g 160 (422)
T COG0738 94 LFWPAAS-SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLG 160 (422)
T ss_pred HHhhhhh-hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHH
Confidence 2232211 112466778889999999999999999999999876443 24666666677877776554
No 241
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.92 E-value=3.9e-05 Score=76.29 Aligned_cols=120 Identities=18% Similarity=0.265 Sum_probs=92.3
Q ss_pred hhhhHHHHHHHhchhHHHHHHhHHHHH-HHHhhhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCccc
Q 013645 75 FSLVASLVVRVLGSKNALILGTTGYWL-FVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGT 153 (439)
Q Consensus 75 ~~~~~g~l~dr~G~r~~l~~g~~~~~~-~~~~~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~ 153 (439)
.-++++++.+|+|+-+++.+|+.+... ++.-....|+|+.++.-+++|+..+.+|.+..+|+++.+ ||+
T Consensus 422 ~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~va----------Pp~ 491 (618)
T KOG3762|consen 422 FYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVA----------PPG 491 (618)
T ss_pred HHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhC----------CCc
Confidence 335678999999999999999987766 444456788888889999999999999999999999998 888
Q ss_pred chhhhhHHHHHH-HHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHH
Q 013645 154 VIGSFNGEFWGM-FASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM 210 (439)
Q Consensus 154 ~rg~~~g~~~~~-~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~ 210 (439)
-|..+.|++... .++|--+|.++++.+.... +-|+ .|.++++.+++.+.+.
T Consensus 492 l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f-----g~~t-tf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 492 LRATAQGLLQGIFHGLGKGLGSLIGGFVVERF-----GART-TFRIFGIACLVTLALF 543 (618)
T ss_pred chHHHHHHHHHHhcccCcchhhhhhhhhheee-----hhHH-HHHHHHHHHHHHHHHH
Confidence 998888887543 4677778888887776532 2344 4556666665555444
No 242
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.90 E-value=0.038 Score=56.20 Aligned_cols=288 Identities=15% Similarity=0.109 Sum_probs=136.0
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCch--HHHHHHHH---HHHhhhhhHHHHHHHhchhHHHHHHhHH
Q 013645 24 KNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGT--ISLGILYT---SFTCFSLVASLVVRVLGSKNALILGTTG 98 (439)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~--~~~~~~~~---~~~~~~~~~g~l~dr~G~r~~l~~g~~~ 98 (439)
+...++++.+++.++++..+|...-.+-+.+-.+.. |. +..-=.+. +..+.-+.-.++.++++++++.-+....
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~-gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~ 98 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYTILRDLKDTLVVTAQ-GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIP 98 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 347788889988888888888766555444322211 21 11111111 1122334578899999999988766665
Q ss_pred HHHHHHh--h-hcch-------h-hHHHHH---HHHhhh-HHHHHHhhhhhH-HHHHhh-------hhhhhcCCCcccch
Q 013645 99 YWLFVAA--N-LFPS-------W-YTMVPA---SLYLGF-AASIIWVGEGTY-LTAAAL-------SHASNHKLHEGTVI 155 (439)
Q Consensus 99 ~~~~~~~--~-~~~~-------~-~~li~~---r~i~Gi-g~g~~~~~~~~~-i~~~~~-------~~a~~~~~~~~~~r 155 (439)
+..+.+. . .+|+ . ..-... +.+.|. ..--.|+..--| ++|... -|..-++..+.+|-
T Consensus 99 F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eA 178 (491)
T PF03219_consen 99 FLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEA 178 (491)
T ss_pred HHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 5443322 1 2221 1 000000 111110 000111111111 111111 13344455577888
Q ss_pred hhhhHHHHHHHHHhhhhhhHHHHHhhc----CCCCCCCCcchHHHHHHHHHHHHHHHHH---HhccCCC-cccc---ccc
Q 013645 156 GSFNGEFWGMFASHQFVGNLITLAVLK----DDKGGSTSGTTLLFIVFLGVITLGTILM---CFLRKEE-DKGE---KET 224 (439)
Q Consensus 156 g~~~g~~~~~~~~G~~iG~~i~~~l~~----~~~~~~~~w~~~~~~~~~~~~~l~~~~~---~~l~~~~-~~~~---~~~ 224 (439)
.|..+++..+.++|.++++.+...+.. ....+...|...+-..+.++.+.+.++. ..+.+.. +.++ ++.
T Consensus 179 KRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~~~~ 258 (491)
T PF03219_consen 179 KRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYPSAK 258 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchhhh
Confidence 899999999999999998877666655 1111223454433223333333333322 2222110 0000 010
Q ss_pred cccchhhhhhHHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchhhhcccccc----cchHHHHHHHHHHHHHH
Q 013645 225 ADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV----SGVGGAMAVYGAFDAIC 300 (439)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~i~~~ig 300 (439)
.+++.+++.+.++. .+-++++|.+..+..+....|++....-..+-..+.+..-++ +-.|-.....|+..++.
T Consensus 259 ~~kk~k~k~s~~es---~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~ 335 (491)
T PF03219_consen 259 KKKKKKPKMSLKES---FKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIM 335 (491)
T ss_pred cccccCCCccHHHH---HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 11111112233332 334567877777776666666554332111111111110111 12344455667777777
Q ss_pred HHhhhhhhcCCCCcc
Q 013645 301 SLAAGRLTTGLPSIT 315 (439)
Q Consensus 301 ~~~~G~l~d~~~~r~ 315 (439)
.++.+++.+|.|.+.
T Consensus 336 ~~l~~~iir~~GW~~ 350 (491)
T PF03219_consen 336 MFLSSNIIRRFGWRT 350 (491)
T ss_pred HHHHHHHHHHhhHHH
Confidence 778888888888553
No 243
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.86 E-value=0.00019 Score=71.79 Aligned_cols=147 Identities=20% Similarity=0.129 Sum_probs=97.0
Q ss_pred cccchHHHHHHHHHHHHHHHHhhhhhhcCCCC-cceehhhHHHHHHHH-HHHHHhhccCCCCccchHHHHHHHHHHhhhh
Q 013645 282 GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPS-ITFIVSGGAIAQVVV-FLWILINYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 282 ~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~-r~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
+.+-.|.+.+...++.+++++++|+.+.|.++ |++++ .|.++++++ .+++.+.+.++.. -.+++++-++.|+|.
T Consensus 69 ~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli-~s~ii~~~g~llY~~l~~~~~~~---~y~mL~~R~l~Gvg~ 144 (488)
T KOG2325|consen 69 TATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI-VSFLIAIIGNLLYLALAYVPNGV---KYLMLVARILTGVGV 144 (488)
T ss_pred CcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHH-HHHHHHHHHHHHHHHHHhcccch---HHHHHHHHHHcCcCc
Confidence 34557888889999999999999999998874 55564 666665443 3332334444422 257888999999986
Q ss_pred hhhhhhHHHHHHhhc-cCCchhhHHHHHHHHHHHHHHHHHHhhh-----------------hhHHHHHHHHHHHHHHHHH
Q 013645 360 GVLNTQLSALLGILF-KHDTEGAFAQLKVWQCASIAVVFFIGPY-----------------ISLQAMLIVMVVGICVALV 421 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~-p~~~~~a~s~~~~~~~~g~~i~~~i~~~-----------------~~~~~~~~~~~~~~~~~~~ 421 (439)
+. ....-+++++.. ++||.+|++.....+.+|..+|+.+++. .-+....|+.+.+.++.++
T Consensus 145 ~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v 223 (488)
T KOG2325|consen 145 GN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIV 223 (488)
T ss_pred cc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHH
Confidence 55 446778888754 5666678877666666666666544421 1355666777777777777
Q ss_pred HHHHHHHHHhhh
Q 013645 422 GILFLTIQVEKA 433 (439)
Q Consensus 422 ~~~~~~~~~~~~ 433 (439)
...+.-+..+|+
T Consensus 224 ~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 224 IILFFFKEVYRG 235 (488)
T ss_pred HHHhheeecccC
Confidence 666554444333
No 244
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.84 E-value=0.042 Score=54.89 Aligned_cols=126 Identities=12% Similarity=-0.002 Sum_probs=71.0
Q ss_pred hhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHH-HhhccCCCC--ccchHHHHH
Q 013645 274 KEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVTSG--VLGTLYPLI 350 (439)
Q Consensus 274 ~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~ 350 (439)
.+..+++++...+|..-..-.+..+.|++...++.+|+|..+.= ..+.....+++... ...|.+..+ ......++.
T Consensus 283 ~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G-~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~ 361 (432)
T PF06963_consen 283 AYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAG-LWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLG 361 (432)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhH-HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHH
Confidence 33445677778888888888888999999999999999954422 24444443332211 112333321 111122333
Q ss_pred HHHHHhhhhhhhhhhHHHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHHh
Q 013645 351 MAALLGIGDGVLNTQLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIG 400 (439)
Q Consensus 351 ~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~-a~s~~~~~~~~g~~i~~~i~ 400 (439)
+.++-=+|--.+--...-++-|..|++++. ..|.-+..|++...+.+...
T Consensus 362 gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 362 GIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred HHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333344455677778876654 45677777776666655443
No 245
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.76 E-value=0.00044 Score=64.53 Aligned_cols=117 Identities=18% Similarity=0.079 Sum_probs=85.5
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHH-hhhcc--hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHh
Q 013645 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA-ANLFP--SWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (439)
Q Consensus 64 ~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~-~~~~~--~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~ 140 (439)
..+.......+++++.|.+.||+|||+.+..+......... ....+ +...+++.|+..|++.+...+...+++.+..
T Consensus 44 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 123 (338)
T COG0477 44 LLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWF 123 (338)
T ss_pred HHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 34555556666778999999999999888888765333222 22333 4778888999999999999898889888886
Q ss_pred hhhhhhcCCCcc-cchhhhhHHHHH-HHHHhhhhhhHHHHHhhcCCCCCCCCcch
Q 013645 141 LSHASNHKLHEG-TVIGSFNGEFWG-MFASHQFVGNLITLAVLKDDKGGSTSGTT 193 (439)
Q Consensus 141 ~~~a~~~~~~~~-~~rg~~~g~~~~-~~~~G~~iG~~i~~~l~~~~~~~~~~w~~ 193 (439)
|+ ++|+...+.... ....|..+|+.++..+... ...+|+.
T Consensus 124 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 165 (338)
T COG0477 124 ----------PEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA---LLWGWRA 165 (338)
T ss_pred ----------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcchHH
Confidence 44 578998898887 5778888888776666543 2245776
No 246
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.72 E-value=0.00037 Score=71.95 Aligned_cols=132 Identities=13% Similarity=0.041 Sum_probs=89.8
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhh
Q 013645 285 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 364 (439)
Q Consensus 285 ~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 364 (439)
.......++-+|.++|++++|.++||+|||.. .+.+.++..++-+ ...+.++ +...++.-++-|++.+....
T Consensus 119 ~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~-~~~~~~~~~i~~~--~~a~a~~-----~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 119 LVALGQSLFFLGVLVGSLIFGPLSDRFGRKPV-LLVSLLLFIIFGI--LTAFAPN-----YWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred HHHHHHHHHHHHHHHHHhhheehHhhcccHHH-HHHHHHHHHHHHH--HHHHhCc-----HHHHHHHHHHHHhhccchhH
Confidence 34556678889999999999999999998874 4566666655432 3455544 46788899999999999999
Q ss_pred hHHHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHHHHHHHHH
Q 013645 365 QLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIGPYI--SLQAMLIVMVVGICVALVGILF 425 (439)
Q Consensus 365 ~~~a~~~~~~p~~~~~-a~s~~~~~~~~g~~i~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~ 425 (439)
..+.+++|+.+++.|. +..+ ......+..+++....+. ++++..++......+..+.++.
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l 253 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFL 253 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999887664 4334 333334443333333222 5666666666666655555433
No 247
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.70 E-value=0.00085 Score=61.77 Aligned_cols=127 Identities=14% Similarity=0.064 Sum_probs=79.5
Q ss_pred HHHhhcchhhhc-ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccch
Q 013645 267 FVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGT 345 (439)
Q Consensus 267 ~~~~~~~~~~~~-~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 345 (439)
|..+.|.+.+++ .+++.++...+...-.+|.-+| ++.|.+.|+.+.+. .+.+|.+...+++.++.............
T Consensus 19 Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~-~l~iG~~~~~~GY~~~~l~~~~~i~~~~~ 96 (250)
T PF06813_consen 19 YTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWV-VLLIGAVLGFVGYGLLWLAVSGRIPSLPV 96 (250)
T ss_pred cchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHH-HHHHHHHHHHHHHHHHHHHHhCccCccch
Confidence 334566666643 2455556666666677777664 88899999999775 44577777766654332222221110113
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHH
Q 013645 346 LYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAV 395 (439)
Q Consensus 346 ~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i 395 (439)
+.+.+..++-|.+.+..++..-....+.||++|+.+.|+.+....+++++
T Consensus 97 ~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai 146 (250)
T PF06813_consen 97 WLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAI 146 (250)
T ss_pred HHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHH
Confidence 44555566666666655555555555789999988888888887777654
No 248
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.68 E-value=0.00067 Score=68.25 Aligned_cols=107 Identities=14% Similarity=0.140 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHH
Q 013645 288 GAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLS 367 (439)
Q Consensus 288 ~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 367 (439)
.+...+.+|.++|+++.|.++||+|||..+. ...++..++-.........+. +-++.+.-++.|+..+......+
T Consensus 64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~-~~~~l~~~~~~~~~~s~~~~~----~e~li~GR~i~Gl~~gl~~~~~p 138 (485)
T KOG0569|consen 64 LIVSIFFIGGMIGSFSSGLLADRFGRKNALL-LSNLLAVLAALLMGLSKSAPS----FEMLILGRLIVGLACGLSTGLVP 138 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHH-HHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHhHHHHHHHH
Confidence 3445788999999999999999999996554 333333222111112222121 35677889999999999999999
Q ss_pred HHHHhhccCCchhhHH-HHHHHHHHHHHHHHHH
Q 013645 368 ALLGILFKHDTEGAFA-QLKVWQCASIAVVFFI 399 (439)
Q Consensus 368 a~~~~~~p~~~~~a~s-~~~~~~~~g~~i~~~i 399 (439)
-+++|..|++-|+..| +..+.-.+|..++..+
T Consensus 139 myl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~ 171 (485)
T KOG0569|consen 139 MYLTEISPKNLRGALGTLLQIGVVIGILLGQVL 171 (485)
T ss_pred HHHhhcChhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999776655 5566666676666433
No 249
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.65 E-value=0.00023 Score=71.97 Aligned_cols=142 Identities=12% Similarity=0.129 Sum_probs=103.5
Q ss_pred ccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhh
Q 013645 281 LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG 360 (439)
Q Consensus 281 ~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~ 360 (439)
.+.++.+++...+..|.+++.+..|.+.||+|.|+.+ ..+.++.++.-. +..+..+.+ +..++++=++-|++++
T Consensus 70 ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~-~~~~~~sa~~t~--l~P~aa~~~---~~~~~~~R~lqGl~~g 143 (466)
T KOG2532|consen 70 WSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVF-FISGLISALLTL--LTPLAASIG---FYLLLVLRFLQGLGQG 143 (466)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHH-HHHHHHHHHHHH--HHHHHHHhc---chhhHHHHHHhHHHHh
Confidence 3445688999999999999999999999999988754 455555554322 233332222 2456788999999999
Q ss_pred hhhhhHHHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHHh-----hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 361 VLNTQLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIG-----PYISLQAMLIVMVVGICVALVGILFLTI 428 (439)
Q Consensus 361 ~~~~~~~a~~~~~~p~~~~~-a~s~~~~~~~~g~~i~~~i~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (439)
...|.+..+.++-.|.++++ ..++......+|.+++.-++ ...++...+++.+++.++-++.+++...
T Consensus 144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred HHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999877654 45655555556666554333 3367889999999988888877776555
No 250
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.62 E-value=7.4e-05 Score=73.08 Aligned_cols=180 Identities=11% Similarity=0.062 Sum_probs=106.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhHhhhccC----C-CCch-------HHHHHHHHHHHh-hhhhHHHHHHHhchhHHHHH
Q 013645 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTE----G-NLGT-------ISLGILYTSFTC-FSLVASLVVRVLGSKNALIL 94 (439)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~-~~g~-------~~~~~~~~~~~~-~~~~~g~l~dr~G~r~~l~~ 94 (439)
++++..+..++++-+++++....++.+.++ . +-.. ....++..+..+ +-.+...++|+.|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 667777788888888887766556555431 0 0000 011122222222 44566778999999999999
Q ss_pred HhHHHHHHHHh-h-hcc---hhhHHHHHHHHhhhHHHHH-HhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHH
Q 013645 95 GTTGYWLFVAA-N-LFP---SWYTMVPASLYLGFAASII-WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS 168 (439)
Q Consensus 95 g~~~~~~~~~~-~-~~~---~~~~li~~r~i~Gig~g~~-~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~ 168 (439)
|..+++++.+. . .++ +-.-+.+...+..+....- -.....+-+|++ |.+-||..-|+..+..-+
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~F----------ParvR~t~hGIsAA~GK~ 453 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIF----------PARVRSTCHGISAASGKA 453 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhc----------hHHHhhhhhhHHHHhccc
Confidence 99988886543 2 222 1111222222332222111 111233345555 788899999999888889
Q ss_pred hhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCc
Q 013645 169 HQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (439)
Q Consensus 169 G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~ 218 (439)
|+++|...-.++.++......+-++ .++++.++++++.+..+++||+..
T Consensus 454 GAivg~~~F~~~t~~~yp~~~g~~~-v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 454 GAIVGAFGFLYLTDHNYPPNIGVRN-VFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred hHHHHHHHhhHhhhccCCccccchH-HHHHHHHHHHHhHheeEEeecccc
Confidence 9888876655554422111123334 467788888888888888997654
No 251
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.52 E-value=0.0034 Score=60.01 Aligned_cols=142 Identities=15% Similarity=0.013 Sum_probs=102.4
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhh
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 359 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~ 359 (439)
+++.+..|...+.+.++-.+.+++..++.+|++.++.+ ..++++-+++.. .-.+. . ...++....+.|.+.
T Consensus 43 gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l-~~~Llli~~G~~--iR~~~-~-----~~~L~~gt~l~G~gI 113 (395)
T COG2807 43 GLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSL-FLALLLIAAGIL--IRSLG-G-----LPLLFLGTLLAGAGI 113 (395)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHH-HHHHHHHHHHHH--HHhcc-c-----HHHHHHHHHHHHhhH
Confidence 45556789999999999999999999999999977643 455554444421 21222 1 256788899999999
Q ss_pred hhhhhhHHHHHHhhccCCchhhHHHHHHHHHHHHHHHHHHh----hh-hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 360 GVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIG----PY-ISLQAMLIVMVVGICVALVGILFLTIQV 430 (439)
Q Consensus 360 ~~~~~~~~a~~~~~~p~~~~~a~s~~~~~~~~g~~i~~~i~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
+..|..++.++-+.||++.+...+.|....++|++++..+. .. .+++..+..-+...+++.+.++.-..|.
T Consensus 114 av~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~ 189 (395)
T COG2807 114 AVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALRE 189 (395)
T ss_pred HHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 99999999999999998877667777777777666654333 22 3577777777777777777776553333
No 252
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.45 E-value=0.017 Score=61.01 Aligned_cols=130 Identities=12% Similarity=0.052 Sum_probs=81.5
Q ss_pred HhhhhhHHHHHHH-hchhHHHHHHhHHHHHHHHh-hh--cc------hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhh
Q 013645 73 TCFSLVASLVVRV-LGSKNALILGTTGYWLFVAA-NL--FP------SWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (439)
Q Consensus 73 ~~~~~~~g~l~dr-~G~r~~l~~g~~~~~~~~~~-~~--~~------~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~ 142 (439)
-+.+++.|.++|+ +|+++.+.++.+++.+..+. .. .+ .....+++=.+..+|.|+.=++..+...|-.+.
T Consensus 37 yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~ 116 (654)
T TIGR00926 37 YLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE 116 (654)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc
Confidence 3566788999998 89999999998877664432 11 11 112234455667777888777777777776521
Q ss_pred hhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCC-C-CCCCcchHHHHHHHHHHHHHHHHH
Q 013645 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK-G-GSTSGTTLLFIVFLGVITLGTILM 210 (439)
Q Consensus 143 ~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~-~-~~~~w~~~~~~~~~~~~~l~~~~~ 210 (439)
. .+++|-..+.++..+.++|..++..+...+..+.. . ...+|.. .|.+.+++++++.+++
T Consensus 117 ~-------~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~-aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 117 R-------QLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPL-AFGVPAILMILALIVF 178 (654)
T ss_pred c-------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHH-HHHHHHHHHHHHHHHH
Confidence 0 22356778888888888998888877776643211 0 0124644 3555555555555554
No 253
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.38 E-value=0.018 Score=54.66 Aligned_cols=288 Identities=17% Similarity=0.176 Sum_probs=147.9
Q ss_pred hhHHHHHHHhchhHHHHHHhHHH-HHHHHhhhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccch
Q 013645 77 LVASLVVRVLGSKNALILGTTGY-WLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVI 155 (439)
Q Consensus 77 ~~~g~l~dr~G~r~~l~~g~~~~-~~~~~~~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~r 155 (439)
++.=.+.|-.-.|+++++-.+.+ .++...-+.++...+=+.-++.|...+.- .+-.+|+= .+.+|+++
T Consensus 60 vpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaE-IAYysYIY----------s~Vd~~~Y 128 (433)
T KOG3810|consen 60 VPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAE-IAYYSYIY----------SKVDPEMY 128 (433)
T ss_pred HHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHH-Hhhhheee----------eecCHHHH
Confidence 34445789999999887766543 23333333444333323445666554332 22223321 22377888
Q ss_pred hhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHhccCCCcc----ccccc------c
Q 013645 156 GSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK----GEKET------A 225 (439)
Q Consensus 156 g~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~----~~~~~------~ 225 (439)
-++.|..-+..-.|-..|..++-.+.... ..+...+-+ +-.....++...++++|.++++ .++++ .
T Consensus 129 qrvt~y~RaA~L~g~~~g~vlaQlLvs~~---~~sy~~LN~-ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e 204 (433)
T KOG3810|consen 129 KRVTGYCRAAFLVGKFVGSVLAQLLVSLE---TLSYTTLNY-ISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLE 204 (433)
T ss_pred HHHHHHhHHHHHHHhHHHhHHHHHHhhhc---ccchhhhch-hhHHHHHHHHHHHhhCCCCchhhhhhcccccceeccch
Confidence 89999888777777777776666654321 112222222 2333344666677889887642 11110 0
Q ss_pred cc--chhhhh----hHHHHHHHHHHhhccchhHH--HHHHHHHhhHHHHHHHhhcchhh-hcccccc--cchHHHHHHHH
Q 013645 226 DA--SVNFYS----YLVSLSKSITTLLADVRMLL--IIPLFAYSGLQQAFVWAEFTKEI-VTPALGV--SGVGGAMAVYG 294 (439)
Q Consensus 226 ~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~--l~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~--~~~g~~~~~~~ 294 (439)
+. +.+... .+..-.++.....++|+.+. +.-.+-.+|+.+.. .|.+.+ .+..-++ ...|..-++..
T Consensus 205 ~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~---nY~Q~LW~~~~~~~~~vyNG~veAv~t 281 (433)
T KOG3810|consen 205 EMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVT---NYTQILWKEVAPNPANVYNGAVEAVST 281 (433)
T ss_pred hcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHH---HHHHHHHHhhCCCchhhhcCHHHHHHH
Confidence 00 000011 11222235556678888743 33344445554422 222221 1000111 12344555556
Q ss_pred HHHHHHHHhhhhhhcCCCCc-ceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhh
Q 013645 295 AFDAICSLAAGRLTTGLPSI-TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL 373 (439)
Q Consensus 295 i~~~ig~~~~G~l~d~~~~r-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~ 373 (439)
+..+++++..|.+.-...|. ..++..+....+.+.. .+.++++ .++++++..++..-+....+....-++.-
T Consensus 282 lLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf--~m~~t~~-----Iw~~Ya~yvlfr~~y~l~itiA~~~iA~n 354 (433)
T KOG3810|consen 282 LLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLF--IMAQTQH-----IWVCYAGYVLFRVIYQLTITIATFQIARN 354 (433)
T ss_pred HHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhh--hhhcccc-----eehhhhhHHHHHhhHhhhhhHHHHHHHHh
Confidence 66677788888876444333 3344445444444322 3455443 47788999999887776666665556555
Q ss_pred ccCCc-hhhHHHHHHHH
Q 013645 374 FKHDT-EGAFAQLKVWQ 389 (439)
Q Consensus 374 ~p~~~-~~a~s~~~~~~ 389 (439)
-.++. +-.||+..+..
T Consensus 355 L~~e~~gLvFGiNTFvA 371 (433)
T KOG3810|consen 355 LSSELFGLVFGINTFVA 371 (433)
T ss_pred hhhhhheeeeehHHHHH
Confidence 54443 33677766643
No 254
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.30 E-value=0.096 Score=51.61 Aligned_cols=55 Identities=11% Similarity=0.080 Sum_probs=36.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhccCC-chhhHHHHHHHHHHHHHHHHHHh
Q 013645 346 LYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG 400 (439)
Q Consensus 346 ~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~-~~~a~s~~~~~~~~g~~i~~~i~ 400 (439)
++.++..+.-|+..|+........+.+..|++ |+-+.+......+.|..++-+++
T Consensus 336 ~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~ 391 (402)
T PF02487_consen 336 WIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLG 391 (402)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45556677778888777777777777776654 44466777777777776654443
No 255
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.22 E-value=3.2e-06 Score=85.45 Aligned_cols=131 Identities=17% Similarity=0.074 Sum_probs=73.0
Q ss_pred HHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh-----hhcc------hhhHHHHHHHHhhhHHH-HHHhhhhhHHHHH
Q 013645 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-----NLFP------SWYTMVPASLYLGFAAS-IIWVGEGTYLTAA 139 (439)
Q Consensus 72 ~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~-----~~~~------~~~~li~~r~i~Gig~g-~~~~~~~~~i~~~ 139 (439)
..++.+.+..+.||+|||++++.+..+.++.... ...+ ++..+... .+..++.+ +..+....+.+|.
T Consensus 299 ~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~l~~~~~~~g~~~~~~~~~~El 377 (451)
T PF00083_consen 299 NFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFL-ALFFAFFSLGWGPLPWIYTAEL 377 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccceee-eecccccccccccccccccccc
Confidence 3456667779999999999998888765443221 1111 22222111 11111112 1123334556677
Q ss_pred hhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHH-HHhccCCCc
Q 013645 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEED 218 (439)
Q Consensus 140 ~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~-~~~l~~~~~ 218 (439)
+ |.+.|++..|+......++..+++.+...+....+ .+. .+.++.++.++..+. .+++||++.
T Consensus 378 f----------Pt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~----~~~--~~~i~~~~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 378 F----------PTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG----GWG--VFLIFAGVCLIAIIFVYFFLPETKG 441 (451)
T ss_pred c----------ccccccccccccccccccccccccccccccccccc----ccc--cchhhHHHHHHHHhheeEEEeeCCC
Confidence 6 88999999998877666766666655444332211 122 255556655555543 467888765
Q ss_pred c
Q 013645 219 K 219 (439)
Q Consensus 219 ~ 219 (439)
+
T Consensus 442 ~ 442 (451)
T PF00083_consen 442 K 442 (451)
T ss_pred C
Confidence 3
No 256
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.14 E-value=0.011 Score=57.67 Aligned_cols=114 Identities=19% Similarity=0.164 Sum_probs=76.0
Q ss_pred CCCchHHHHHHHHHHHhhh----hhHHHHHH-HhchhHHHHHHhHHHHHHH----HhhhcchhhHHHHHHHHhhhHHHHH
Q 013645 58 GNLGTISLGILYTSFTCFS----LVASLVVR-VLGSKNALILGTTGYWLFV----AANLFPSWYTMVPASLYLGFAASII 128 (439)
Q Consensus 58 ~~~g~~~~~~~~~~~~~~~----~~~g~l~d-r~G~r~~l~~g~~~~~~~~----~~~~~~~~~~li~~r~i~Gig~g~~ 128 (439)
.++.....+-+....+.+. ...|.+.. |.+.|+.-.+|+....+.. .+....+.+.+...-++.|+|.|..
T Consensus 239 fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f 318 (403)
T PF03209_consen 239 FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLF 318 (403)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHH
Confidence 3444433444444444333 34566555 6777776666665433222 2234456777777889999999998
Q ss_pred HhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhh
Q 013645 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (439)
Q Consensus 129 ~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~ 181 (439)
.++.-+.+.+.. .+++.|.++|.+.+...++.-+|..+++.+.
T Consensus 319 ~vgals~mM~lt----------~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~ 361 (403)
T PF03209_consen 319 TVGALSLMMDLT----------SAGRAGLFMGAWGAAQAIARGLGTFLGGALR 361 (403)
T ss_pred HHHHHHHHHhCC----------CCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777777775 6788999999999988888888877776653
No 257
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.00 E-value=0.061 Score=51.74 Aligned_cols=88 Identities=15% Similarity=-0.011 Sum_probs=61.1
Q ss_pred cccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhh
Q 013645 278 TPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 357 (439)
Q Consensus 278 ~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 357 (439)
+.+++.++++.++..--..+++...+.|.+.||+|||+. .+..++++.++-+ . ...++ +..+++.-++-|+
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~-cl~~cily~~scl--~---k~~~~---~~~L~~GRvlgGi 133 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKA-CLLFCILYSLSCL--T---KHSSN---YPVLLLGRVLGGI 133 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH-HHHHHHHHHHHHH--H---Hhccc---cHHHHHHHHHHHH
Confidence 346666788888777777778888899999999998874 3455555554321 1 12222 4678888899999
Q ss_pred hhhhhhhhHHHHHHhhc
Q 013645 358 GDGVLNTQLSALLGILF 374 (439)
Q Consensus 358 ~~~~~~~~~~a~~~~~~ 374 (439)
+.+...+.-.++.....
T Consensus 134 aTSLLfS~FEsW~V~Eh 150 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEH 150 (354)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99888887776544333
No 258
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.76 E-value=0.0041 Score=46.12 Aligned_cols=49 Identities=14% Similarity=0.045 Sum_probs=40.6
Q ss_pred hhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceeh
Q 013645 270 AEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIV 318 (439)
Q Consensus 270 ~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~ 318 (439)
+.++.++++.+++..++|.+..+..+...++++++|++.||.++++.++
T Consensus 21 Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l 69 (77)
T PF12832_consen 21 PFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVIL 69 (77)
T ss_pred hhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHH
Confidence 4555555566788889999999999999999999999999999877543
No 259
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.74 E-value=0.018 Score=58.55 Aligned_cols=131 Identities=14% Similarity=-0.023 Sum_probs=89.6
Q ss_pred cchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhh
Q 013645 284 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 363 (439)
Q Consensus 284 ~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~ 363 (439)
.+.+.+..++.++-+++.++.|.+.||++-.+.+. +..+.-.++.. +..+.++ ....++.-++.|+..++..
T Consensus 81 ~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~--~~~~~w~~~~~-~~~~~~s-----~~~~ialr~llGl~es~~w 152 (495)
T KOG2533|consen 81 NQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLS--VSGILWGLFGF-LTAAVHS-----FPGLIALRFLLGLFESGGW 152 (495)
T ss_pred hhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHH--HHHHHHHHHHH-HHHHHhh-----hHHHHHHHHHHHHHhcccc
Confidence 45677778889999999999999999998333222 11111111111 1223222 3567788899999999999
Q ss_pred hhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhhh----------hhHHHHHHHHHHHHHHHHHH
Q 013645 364 TQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPY----------ISLQAMLIVMVVGICVALVG 422 (439)
Q Consensus 364 ~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~~----------~~~~~~~~~~~~~~~~~~~~ 422 (439)
|...++++.-|.++++ ...|++...+++|..++-+++.. .++.+.|++-+++.++..+.
T Consensus 153 P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~ 222 (495)
T KOG2533|consen 153 PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIV 222 (495)
T ss_pred hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHhe
Confidence 9999999999987654 45788887777777666555432 36888888888776655543
No 260
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.71 E-value=0.02 Score=60.43 Aligned_cols=137 Identities=18% Similarity=0.162 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHhhhhhhcCC-CCcceehhhHHHHHHHHHHHHHhhccCCC---CccchHHHHHHHHHHhhhhhhhhhhH
Q 013645 291 AVYGAFDAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTS---GVLGTLYPLIMAALLGIGDGVLNTQL 366 (439)
Q Consensus 291 ~~~~i~~~ig~~~~G~l~d~~-~~r~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~G~~~~~~~~~~ 366 (439)
..+....-+..+++|+++|+. |+++.+ ..+.++..++..+ +...+.+ +..+....++..++..+|.+...|..
T Consensus 30 ~~f~~l~yl~pilGg~iAD~~lG~~~tI-l~~~ii~~lG~~l--lai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~v 106 (654)
T TIGR00926 30 HTFTYLCYLTPLIGAIIADGWLGKFKTI-LYLSIVYVVGHAL--LSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCV 106 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHH--HHhccCcccccchHHHHHHHHHHHHHhhccccccCc
Confidence 333444455566788888874 555544 4566666555432 2222111 11112345677888899999999999
Q ss_pred HHHHHhhccCCc-h---hhHHHHHHHHHHHHHHHHHHhhhh-----------hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 367 SALLGILFKHDT-E---GAFAQLKVWQCASIAVVFFIGPYI-----------SLQAMLIVMVVGICVALVGILFLTIQV 430 (439)
Q Consensus 367 ~a~~~~~~p~~~-~---~a~s~~~~~~~~g~~i~~~i~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
.+..+|.++++. + +.|.++....++|+.++..+.++. ++...+.+.+++.+++.+.++.-.+++
T Consensus 107 saf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y 185 (654)
T TIGR00926 107 SAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMY 185 (654)
T ss_pred hhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999997542 2 256777777778877776554433 366677777777788877776554444
No 261
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.67 E-value=0.15 Score=50.41 Aligned_cols=98 Identities=13% Similarity=0.024 Sum_probs=55.8
Q ss_pred HhhhhhHHHHHHH----hchhHHHHHHhHH-HH--HHHHhhh-------cch---------hhHHHHHHHHhhhHHHHHH
Q 013645 73 TCFSLVASLVVRV----LGSKNALILGTTG-YW--LFVAANL-------FPS---------WYTMVPASLYLGFAASIIW 129 (439)
Q Consensus 73 ~~~~~~~g~l~dr----~G~r~~l~~g~~~-~~--~~~~~~~-------~~~---------~~~li~~r~i~Gig~g~~~ 129 (439)
.+.|++.|..+|| +||||..+..... .. ++.+.+. .++ ..+.++.-.+.=++.-.+.
T Consensus 81 ~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~q 160 (498)
T KOG0637|consen 81 LLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQ 160 (498)
T ss_pred ceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhh
Confidence 3567788888885 8999987766543 22 2222221 111 1122222233333333444
Q ss_pred hhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHH
Q 013645 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (439)
Q Consensus 130 ~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~ 179 (439)
...-++++|... +++|+-++.+.+..+..+|.++|...+..
T Consensus 161 gp~ra~L~Dl~~---------~d~~~~~Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 161 GPCRALLADLAR---------GDAKKTRANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred hhHHHHHHHhcc---------ChhhhhccchhHHHHHHhcceeeeecccc
Confidence 445567777763 33333338898888888988888877764
No 262
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.44 E-value=0.0048 Score=60.67 Aligned_cols=143 Identities=14% Similarity=0.143 Sum_probs=82.8
Q ss_pred HhhHHHHH--HHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcC----CCCcceehhhHHHHHHHHHHHHH
Q 013645 260 YSGLQQAF--VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWIL 333 (439)
Q Consensus 260 ~~g~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~----~~~r~~~~~~g~~~~~~~~~~~~ 333 (439)
..|.+.++ -.++.++++.+-+..-++.+.+-..--+..++.+++.|..+|| +|||++.+..+.+..++.+. +
T Consensus 41 a~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~--L 118 (498)
T KOG0637|consen 41 AAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLF--L 118 (498)
T ss_pred HHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHh--h
Confidence 34554433 2345555543323222333332222233345567778889986 67888887666665555543 2
Q ss_pred hhccCC--------CCc----cchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCC-chh-hHHHHHHHHHHHHHHHHHH
Q 013645 334 INYSVT--------SGV----LGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEG-AFAQLKVWQCASIAVVFFI 399 (439)
Q Consensus 334 ~~~~~~--------~~~----~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~-~~~-a~s~~~~~~~~g~~i~~~i 399 (439)
+.+.+| ... ....+..+..-+.=++....+...-++++|+..++ +.+ |.+.+-++..+|..+++..
T Consensus 119 ig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~ 198 (498)
T KOG0637|consen 119 IGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYAL 198 (498)
T ss_pred hhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeec
Confidence 333322 110 11122334455555556667778889999998554 444 8889999999999999887
Q ss_pred hhhhh
Q 013645 400 GPYIS 404 (439)
Q Consensus 400 ~~~~~ 404 (439)
+++.+
T Consensus 199 g~y~~ 203 (498)
T KOG0637|consen 199 GSYLG 203 (498)
T ss_pred ccccC
Confidence 76553
No 263
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.19 E-value=0.024 Score=55.81 Aligned_cols=88 Identities=17% Similarity=0.122 Sum_probs=69.7
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhccCC-ch---hhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHH
Q 013645 346 LYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TE---GAFAQLKVWQCASIAVVFFIGPY----ISLQAMLIVMVVGIC 417 (439)
Q Consensus 346 ~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~-~~---~a~s~~~~~~~~g~~i~~~i~~~----~~~~~~~~~~~~~~~ 417 (439)
..++++..+.++|.|...|...++.+|.++++ +. +.|..+...-++|+.++..+.++ .++.+.+.+..+..+
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~ 113 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGML 113 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHH
Confidence 56788899999999999999999999999876 32 36788889999999998876655 468888888888888
Q ss_pred HHHHHHHHHHHHHhhh
Q 013645 418 VALVGILFLTIQVEKA 433 (439)
Q Consensus 418 ~~~~~~~~~~~~~~~~ 433 (439)
++.+.++.-.++++++
T Consensus 114 ~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 114 LALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHCCCCTT--S
T ss_pred HHHHHHHhCCcCCcCc
Confidence 8888776655555444
No 264
>PF12832 MFS_1_like: MFS_1 like family
Probab=95.64 E-value=0.11 Score=38.44 Aligned_cols=68 Identities=16% Similarity=0.180 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHHHHHH----HHHHHhhhhhHHHHHHHhchhHHHHHHhHH
Q 013645 31 HILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGIL----YTSFTCFSLVASLVVRVLGSKNALILGTTG 98 (439)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~----~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~ 98 (439)
+.+....++.+.+..+..+..+...++.+.+....+++ ...-.+++++.|.++||+++++........
T Consensus 3 ~~lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 3 LPLKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 34445556666666665555555445445554444443 334456788999999999999987776543
No 265
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.62 E-value=2.9 Score=42.14 Aligned_cols=107 Identities=17% Similarity=0.205 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHh--hccCCCC---c-cchHHHHHHHHHHhhhhhh
Q 013645 288 GAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI--NYSVTSG---V-LGTLYPLIMAALLGIGDGV 361 (439)
Q Consensus 288 ~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~--~~~~~~~---~-~~~~~~~~~~~l~G~~~~~ 361 (439)
.....+.++..+|+.+..+.. .-++|...+.+..+.-.+ ++.+++ ...++.+ . .+-+..++..+++|+.+|-
T Consensus 311 i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~i-FIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 311 ICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVL-FIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHH-HHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 456689999999999765532 111121122233333222 111111 1111000 0 0114566778889998877
Q ss_pred hhhhHHHHHHhhccCCchh-hHHHHHHHHHHHHHHH
Q 013645 362 LNTQLSALLGILFKHDTEG-AFAQLKVWQCASIAVV 396 (439)
Q Consensus 362 ~~~~~~a~~~~~~p~~~~~-a~s~~~~~~~~g~~i~ 396 (439)
..+....+..+..+++++. +-.+..+.-.+|.++|
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~G 424 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALG 424 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766666666665544333 3234444444444433
No 266
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.60 E-value=1.2 Score=45.24 Aligned_cols=81 Identities=12% Similarity=0.131 Sum_probs=48.5
Q ss_pred HHHHHHHHHhhhhhhhhh-hHHHHHHhhccCCchh-hHHHHHHHHHHHHHHHHHHhhhhh----------------HHHH
Q 013645 347 YPLIMAALLGIGDGVLNT-QLSALLGILFKHDTEG-AFAQLKVWQCASIAVVFFIGPYIS----------------LQAM 408 (439)
Q Consensus 347 ~~~~~~~l~G~~~~~~~~-~~~a~~~~~~p~~~~~-a~s~~~~~~~~g~~i~~~i~~~~~----------------~~~~ 408 (439)
..++..=+||.. ..+ .-+++..|++..++++ -++++..+.++|..++..+..+.+ ....
T Consensus 133 ~FYv~~elw~~~---vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l 209 (472)
T TIGR00769 133 LFYVMAELWGSV---VLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNL 209 (472)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHH
Confidence 345555555543 343 5678899999776653 688888888888877654433221 1123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 013645 409 LIVMVVGICVALVGILFLTIQV 430 (439)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~ 430 (439)
+.+.++.+.+....+.++++..
T Consensus 210 ~~i~~~~~~~~~~~~~~l~~~~ 231 (472)
T TIGR00769 210 MVIVICSGLAIILLYWWVNRNV 231 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 3444445556666666666544
No 267
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.60 E-value=0.25 Score=48.69 Aligned_cols=86 Identities=13% Similarity=0.098 Sum_probs=60.9
Q ss_pred hchhHHHHHHhHHHH--HHHHh----hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhh
Q 013645 86 LGSKNALILGTTGYW--LFVAA----NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFN 159 (439)
Q Consensus 86 ~G~r~~l~~g~~~~~--~~~~~----~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~ 159 (439)
+--|+..+...+-.. ++.+. .+.|+.+.+++.-+..|+-.|..++.....+.+.. ++++|..++
T Consensus 304 ~rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~----------~~~~REFsl 373 (402)
T PF02487_consen 304 FRIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEV----------PPEDREFSL 373 (402)
T ss_pred eehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcC----------CHHHHHHHH
Confidence 334666666654321 12111 13577777777778899999998887766555443 788999999
Q ss_pred HHHHHHHHHhhhhhhHHHHHhh
Q 013645 160 GEFWGMFASHQFVGNLITLAVL 181 (439)
Q Consensus 160 g~~~~~~~~G~~iG~~i~~~l~ 181 (439)
|....+.+.|..++++++..+-
T Consensus 374 g~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 374 GAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999999988887763
No 268
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.21 E-value=0.13 Score=47.28 Aligned_cols=76 Identities=11% Similarity=-0.023 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCCCcceehh----hHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhh
Q 013645 289 AMAVYGAFDAICSLAAGRLTTGLPSITFIVS----GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 364 (439)
Q Consensus 289 ~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 364 (439)
...++-.+..+|.+..|..++..-+|+..+. .+.+...+..++ .....++.. .+....++..++-|++.-..|+
T Consensus 146 ~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~~~~g~~~~-~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 146 FQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-VYFVGPGNA-AGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-HHHhCcchH-HHHHHHHHHHHHHHHHHHhhhH
Confidence 3345555556777778888765444443332 122222222111 112222221 1134566677777777666565
Q ss_pred hH
Q 013645 365 QL 366 (439)
Q Consensus 365 ~~ 366 (439)
.+
T Consensus 224 Vi 225 (267)
T PF07672_consen 224 VI 225 (267)
T ss_pred HH
Confidence 53
No 269
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.17 E-value=4.1 Score=41.20 Aligned_cols=156 Identities=13% Similarity=0.129 Sum_probs=74.4
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHHHhhHHHHHHHhhcchh--hhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCC
Q 013645 235 LVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKE--IVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLP 312 (439)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~ 312 (439)
.++..+.+.+++|-|.+..+....+.+-+ +|..+.=... +.+.|+..+..+....+.--.+++...+.||.+..-.
T Consensus 264 i~~~Y~~l~~ilkLp~V~~li~ilL~~Ki--gF~a~da~T~LKLlEkG~~KE~LAl~~li~~P~qii~~~~~~Kws~g~~ 341 (544)
T PF13000_consen 264 IKDVYKSLWKILKLPNVQTLIIILLTAKI--GFQANDAVTSLKLLEKGLSKEDLALLVLIDFPFQIILPYYIGKWSAGSP 341 (544)
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHh--ccccchhhhHHHHHHcCCCHHHhHHHHHHhhhHHHHHHHHhhhhhcCCC
Confidence 45555667788888888776654332222 1211111111 2345676666666555555556666666776653211
Q ss_pred C-----c---------c--eeh----------hhHHHHHHHH-H--HHHHhhccCCCCc-cc-hHHHHHHHHHHhhhhhh
Q 013645 313 S-----I---------T--FIV----------SGGAIAQVVV-F--LWILINYSVTSGV-LG-TLYPLIMAALLGIGDGV 361 (439)
Q Consensus 313 ~-----r---------~--~~~----------~~g~~~~~~~-~--~~~~~~~~~~~~~-~~-~~~~~~~~~l~G~~~~~ 361 (439)
. | + ..+ ..+...-.+. . ..+...++.+... .. +.++++...+-.+....
T Consensus 342 P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stv 421 (544)
T PF13000_consen 342 PLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTV 421 (544)
T ss_pred ccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0 000 0111111110 0 0001122322221 00 12233445555555555
Q ss_pred hhhhHHHHHHhhccCCchh-hHHHHHHHHHHH
Q 013645 362 LNTQLSALLGILFKHDTEG-AFAQLKVWQCAS 392 (439)
Q Consensus 362 ~~~~~~a~~~~~~p~~~~~-a~s~~~~~~~~g 392 (439)
......|.-+.+.++.-++ ...+.|-..++|
T Consensus 422 mFVai~AFharISDP~IGGTYMTLLNTvSNLG 453 (544)
T PF13000_consen 422 MFVAIMAFHARISDPAIGGTYMTLLNTVSNLG 453 (544)
T ss_pred HHHHHHHHHhhccCcccchHHHHHHHHHHhcC
Confidence 5566677777888777654 457788887776
No 270
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.80 E-value=0.14 Score=54.09 Aligned_cols=151 Identities=13% Similarity=0.087 Sum_probs=103.0
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccC------------------CC-
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV------------------TS- 340 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~------------------~~- 340 (439)
++..++.|.+...+-+++.+...+.....-|.+|.+ ++-.|+++.+++-++ ...++ .+
T Consensus 128 ~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr-~Ig~G~~~m~lgsll--~alPHf~~~~y~~~~~~~~~~~~~~~ 204 (735)
T KOG3626|consen 128 KISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPR-WIGIGLVLMGLGSLL--FALPHFFSGPYEYELEVIKQSVENPS 204 (735)
T ss_pred CCCCCcceeEeeecccchhhhhHhHHHhccccCccc-eeeechhHHHHHHHH--HhChHHhcCcchhhhhhhhccccCCc
Confidence 455566787777788888888888888877776554 445666666543221 11110 00
Q ss_pred ----------------------------CccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhh-HHHHHHHHHH
Q 013645 341 ----------------------------GVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGA-FAQLKVWQCA 391 (439)
Q Consensus 341 ----------------------------~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a-~s~~~~~~~~ 391 (439)
+...+.+++++-++.|+|..-.++.-.+++-|-..+++... .|++.....+
T Consensus 205 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~l 284 (735)
T KOG3626|consen 205 SSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAIL 284 (735)
T ss_pred cccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHh
Confidence 00012246678899999988888877788887776555444 5888888899
Q ss_pred HHHHHHHHhhh-----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013645 392 SIAVVFFIGPY-----------------------ISLQAMLIVMVVGICVALVGILFLTIQVEKA 433 (439)
Q Consensus 392 g~~i~~~i~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
|.++|++++.+ ..+|..+.+...+.+++.+.+++.-+.+++.
T Consensus 285 GPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~ 349 (735)
T KOG3626|consen 285 GPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKS 349 (735)
T ss_pred hhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccc
Confidence 99999877521 2577788888889999999998877777654
No 271
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=94.54 E-value=0.52 Score=47.74 Aligned_cols=98 Identities=16% Similarity=0.191 Sum_probs=67.0
Q ss_pred HHhhhhh-HHHHHHHhchhHHHHHHhHHHHHHHHh-hhcchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCC
Q 013645 72 FTCFSLV-ASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (439)
Q Consensus 72 ~~~~~~~-~g~l~dr~G~r~~l~~g~~~~~~~~~~-~~~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~ 149 (439)
.-+++++ .+.+...+|-|+++.+|+..-.+-... .++.+.++.+...++.++. +...++..+.++...
T Consensus 290 ~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v--------- 359 (463)
T KOG2816|consen 290 GIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-GIVFPAIRAFASILV--------- 359 (463)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-cchhHHHHhHHHhhc---------
Confidence 3455655 457889999999888888765554333 2445555555455554444 455566666666665
Q ss_pred CcccchhhhhHHHHHHHHHhhhhhhHHHHHh
Q 013645 150 HEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (439)
Q Consensus 150 ~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l 180 (439)
+++++|++.++......+...+++.+=..+
T Consensus 360 -~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 360 -SPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred -ccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 789999999999999988888888764444
No 272
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.52 E-value=0.26 Score=48.46 Aligned_cols=108 Identities=11% Similarity=0.017 Sum_probs=73.1
Q ss_pred HHHHHHhHHHHHHHHh----hhcc------hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhh
Q 013645 90 NALILGTTGYWLFVAA----NLFP------SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFN 159 (439)
Q Consensus 90 ~~l~~g~~~~~~~~~~----~~~~------~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~ 159 (439)
|++.+|.+.+++..+. ...+ +...++++-.+.++|.|+.=++..++.+|-.+++ .+++|.+.+
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~-------~~~~~~~~F 74 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDED-------DDSRRDSFF 74 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTT-------TTTHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhccc-------chhhhhhhH
Confidence 4556666666554332 1111 2356777888999999999999889998887532 256788889
Q ss_pred HHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHH
Q 013645 160 GEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM 210 (439)
Q Consensus 160 g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~ 210 (439)
.+++...++|..++..+...+.++ .+|.. .|.+..+..+++.+.+
T Consensus 75 ~~fY~~in~G~~~~~~~~~~i~~~-----~~~~~-~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 75 NWFYWGINIGSLFSPTLVPYIQQN-----YGWFL-GFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHC-----S-HHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHhhcccchhhccc-----cchhh-hhhHHHHHHHHHHHHH
Confidence 999999999999998887777643 34654 4555555555565544
No 273
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.16 E-value=1.6 Score=40.09 Aligned_cols=110 Identities=24% Similarity=0.202 Sum_probs=68.3
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhh
Q 013645 285 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 364 (439)
Q Consensus 285 ~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 364 (439)
..+.......++..++.++.|++.||.|||+ ....+......+.. ...+.++.. .....+...+.|++.+...+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~ 113 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRRK-VLIIGLLLFLLGTL--LLALAPNVG---LALLLILRLLQGLGGGGLLP 113 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccchH-HHHHHHHHHHHHHH--HHHhCccch---HHHHHHHHHHHHhhhHHHHH
Confidence 4566777788888888899999999998774 33344432222211 122222211 24455555558888888899
Q ss_pred hHHHHHHhhccC--CchhhHHHHHH-HHHHHHHHHHHHh
Q 013645 365 QLSALLGILFKH--DTEGAFAQLKV-WQCASIAVVFFIG 400 (439)
Q Consensus 365 ~~~a~~~~~~p~--~~~~a~s~~~~-~~~~g~~i~~~i~ 400 (439)
...+++.+.+|+ ++....+.... ....|..+++.+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (338)
T COG0477 114 VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLA 152 (338)
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999996 33444554444 3445555554333
No 274
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=93.90 E-value=0.015 Score=60.11 Aligned_cols=151 Identities=13% Similarity=0.069 Sum_probs=2.9
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccC-----------C---------
Q 013645 280 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV-----------T--------- 339 (439)
Q Consensus 280 ~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~-----------~--------- 339 (439)
+++.+++|.+.+.+-++.++..++...+.+|-+|. .++-.|.++.+++.++ +..++ +
T Consensus 34 ~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrp-rwig~g~~~~~~g~~l--~~lPhf~~~~y~~~~~~~~~~~~~~~ 110 (539)
T PF03137_consen 34 GLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRP-RWIGIGALLMGLGSLL--FALPHFLSGPYSYEEASNSNGNSSIS 110 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc-ceeeecHHHHHHHHHH--HhccHhhcCCCccccccccccccccc
Confidence 45667899999999999999999888888876543 4555666665543221 11100 0
Q ss_pred -----------------------C-C-ccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchhh-HHHHHHHHHHHH
Q 013645 340 -----------------------S-G-VLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGA-FAQLKVWQCASI 393 (439)
Q Consensus 340 -----------------------~-~-~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~a-~s~~~~~~~~g~ 393 (439)
. . ..-+.+++++-++.|+|..-..+.-.+++-|-.++++.+. .|++.....+|.
T Consensus 111 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGP 190 (539)
T PF03137_consen 111 SNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGP 190 (539)
T ss_dssp -----------------------------------------SSS------------------------------------
T ss_pred cccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccH
Confidence 0 0 0012346678899999999889888899999887776553 588888888888
Q ss_pred HHHHHHhhh--------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013645 394 AVVFFIGPY--------------------------ISLQAMLIVMVVGICVALVGILFLTIQVEKA 433 (439)
Q Consensus 394 ~i~~~i~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (439)
++|++++.. ..+|..+.+.+++.++..+.++..=++++++
T Consensus 191 a~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~ 256 (539)
T PF03137_consen 191 ALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGT 256 (539)
T ss_dssp ------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCc
Confidence 888765421 1366667777777777777777655555443
No 275
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=93.41 E-value=1.8 Score=43.05 Aligned_cols=116 Identities=13% Similarity=-0.018 Sum_probs=66.4
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchH--HHHHHHHHHhhhhhhh
Q 013645 285 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTL--YPLIMAALLGIGDGVL 362 (439)
Q Consensus 285 ~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~G~~~~~~ 362 (439)
..-+...+|.+..+...+..-|+.||.|-|..+ ..+.+++.++-..=.....+..+. +.. +......+-+.++...
T Consensus 80 ~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~-llgt~ln~iGa~Ir~iss~p~v~~-~f~~~l~~~Gq~iaa~Aq~Fi 157 (480)
T KOG2563|consen 80 AADWLSMIYMVVSVPFGFAAMWILDKFGLRTAL-LLGTVLNGIGAWIRLISSLPFVPP-LFRRPLTHTGQSIAAAAQPFI 157 (480)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhcccchHHHH-HHHHHHHHHHHHHhhhccCccccc-cchhhhhHHhHHHHHHhhhHh
Confidence 344556678888888888889999999988654 467777665431101111110000 012 4555666666655444
Q ss_pred hhhHHHHHHhhccCCch-hhHHHHHHHHHHHHHHHHHHhhh
Q 013645 363 NTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPY 402 (439)
Q Consensus 363 ~~~~~a~~~~~~p~~~~-~a~s~~~~~~~~g~~i~~~i~~~ 402 (439)
.....-+-..-||++++ .|.+.--+..-+|.++++++.|.
T Consensus 158 m~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppi 198 (480)
T KOG2563|consen 158 LGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPI 198 (480)
T ss_pred hccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccce
Confidence 33333444455776654 46555555555788888777653
No 276
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=93.37 E-value=9.9 Score=38.41 Aligned_cols=156 Identities=13% Similarity=0.085 Sum_probs=79.6
Q ss_pred cccchhHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHHHHH----HHH-HHHhhhhhHHHHHHHhchhHHHHHHhHH
Q 013645 24 KNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGI----LYT-SFTCFSLVASLVVRVLGSKNALILGTTG 98 (439)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~----~~~-~~~~~~~~~g~l~dr~G~r~~l~~g~~~ 98 (439)
+...+.++-+++-++|+...|+....+-+.+-.. ..|.-..+. ... +..+..++-.++.+++.++++.-.-...
T Consensus 23 r~E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~-~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~ 101 (509)
T COG3202 23 RYELKKFLPLALLFFCILFNYNLLRSLKDSLVVT-RQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGF 101 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhheEee-cCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 3478888899888888888887766655543321 122111111 111 2234456678899999999988665554
Q ss_pred HHHHHHhh---hcc-------hhhHHHHHHHHhhhHH-H---H-----HHhhhhhH-HHHHhhh-------hhhhcCCCc
Q 013645 99 YWLFVAAN---LFP-------SWYTMVPASLYLGFAA-S---I-----IWVGEGTY-LTAAALS-------HASNHKLHE 151 (439)
Q Consensus 99 ~~~~~~~~---~~~-------~~~~li~~r~i~Gig~-g---~-----~~~~~~~~-i~~~~~~-------~a~~~~~~~ 151 (439)
+..+.+.+ .+| +... .|=+++..- . . -|+...-| .+|..+. |..-++...
T Consensus 102 F~~fF~LFa~Vi~P~~~~~hp~~~~---~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt 178 (509)
T COG3202 102 FLGFFALFAFVIYPYKDILHPDPEF---SRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITT 178 (509)
T ss_pred HHHHHHHHHHHHhccccccCCCHHH---HHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 43333221 121 1000 010100000 0 0 01110000 0011000 111222235
Q ss_pred ccchhhhhHHHHHHHHHhhhhhhHHHHHhhcC
Q 013645 152 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (439)
Q Consensus 152 ~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~ 183 (439)
.+|-.|..+++..+.+++..+++.+..++..+
T Consensus 179 ~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 179 IEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 56778899999999999988888877777653
No 277
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=93.23 E-value=2.1 Score=36.44 Aligned_cols=95 Identities=18% Similarity=0.094 Sum_probs=59.0
Q ss_pred HHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhh
Q 013645 294 GAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL 373 (439)
Q Consensus 294 ~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~ 373 (439)
.....+..++.+.+.+++|.|..+ ++|.+...+-.. ...+ ++ ...++.+.++.|++.+..++..-.++.+.
T Consensus 47 Y~~~~~s~l~~P~iv~~lg~K~sm-~lg~~~y~~y~~--~~~~-~~-----~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 47 YGSFAISCLFAPSIVNKLGPKWSM-ILGSLGYAIYIA--SFFY-PN-----SYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHhHHHHHHHHhhHHHH-HHHHHHHHHHHH--HHHh-hh-----HHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 333455566677778888887655 466665553221 1122 23 25678899999999999999988999987
Q ss_pred ccCCc-hhhHH----HHHHHHHHHHHHHH
Q 013645 374 FKHDT-EGAFA----QLKVWQCASIAVVF 397 (439)
Q Consensus 374 ~p~~~-~~a~s----~~~~~~~~g~~i~~ 397 (439)
..++. ++-.+ +++..+-.|..+.+
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 76554 33333 44444444444433
No 278
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=92.46 E-value=2.6 Score=42.45 Aligned_cols=131 Identities=9% Similarity=0.006 Sum_probs=75.5
Q ss_pred hHHHHHHHhchhHHHHHHhHHHHHHHHhh--hc---------chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhh
Q 013645 78 VASLVVRVLGSKNALILGTTGYWLFVAAN--LF---------PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (439)
Q Consensus 78 ~~g~l~dr~G~r~~l~~g~~~~~~~~~~~--~~---------~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~ 146 (439)
.......+..-|+++....+..++..+.. +. ++-+..+.-.++..+-....+......+++..
T Consensus 274 ~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lc------ 347 (433)
T PF03092_consen 274 LYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLC------ 347 (433)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHC------
Confidence 33444555667777777776655443331 11 12122223445555555666666666677776
Q ss_pred cCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhcCCCCCCCCcchH--HHHHHHHHHHHHHHHHHhccCCCc
Q 013645 147 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL--LFIVFLGVITLGTILMCFLRKEED 218 (439)
Q Consensus 147 ~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~~~~~~~~~w~~~--~~~~~~~~~~l~~~~~~~l~~~~~ 218 (439)
|+...|..+++..+..++|..++..++..+....+....+++.+ ..++..++.++.+.+..++|+.++
T Consensus 348 ----P~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 348 ----PKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCch
Confidence 88899999999999999999999888888765432111112221 122333333444444456666443
No 279
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.12 E-value=7.8 Score=39.12 Aligned_cols=81 Identities=16% Similarity=0.112 Sum_probs=55.6
Q ss_pred HHHHhchhHHHHHHhHHHHHHHHhh-h-----c-------------chhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhh
Q 013645 82 VVRVLGSKNALILGTTGYWLFVAAN-L-----F-------------PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (439)
Q Consensus 82 l~dr~G~r~~l~~g~~~~~~~~~~~-~-----~-------------~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~ 142 (439)
=.+++|+++.+.++..+...+.+.. . + |+.....+..++.|++-+..-+....++.+..
T Consensus 305 rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-- 382 (461)
T KOG3098|consen 305 RIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-- 382 (461)
T ss_pred hhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh--
Confidence 3677999999999988766554431 1 1 13556667789999999998777777777664
Q ss_pred hhhhcCCCcccchhhhhHHHHHHHHHhhhhh
Q 013645 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVG 173 (439)
Q Consensus 143 ~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG 173 (439)
+++|..+.+++..-...+..++
T Consensus 383 ---------~~~~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 383 ---------PDDRAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred ---------cCchHHHHHHHHHHHHHHHHHH
Confidence 4677777777665454544333
No 280
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.01 E-value=2.9 Score=42.15 Aligned_cols=61 Identities=7% Similarity=-0.026 Sum_probs=39.2
Q ss_pred hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHh
Q 013645 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (439)
Q Consensus 110 ~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l 180 (439)
+-+..++.-++.|+..|-+.+....+..+.. ++++|..+-.+...+..+|..+|..++..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v----------~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQV----------DPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444578889988876655444333222 567887777777777778888887776554
No 281
>PRK03612 spermidine synthase; Provisional
Probab=91.87 E-value=6 Score=40.88 Aligned_cols=26 Identities=8% Similarity=-0.031 Sum_probs=17.4
Q ss_pred chHHHHHHHHHHHHHHHHhhhhhhcC
Q 013645 285 GVGGAMAVYGAFDAICSLAAGRLTTG 310 (439)
Q Consensus 285 ~~g~~~~~~~i~~~ig~~~~G~l~d~ 310 (439)
..+.+..++-.+-.+|+.+.+++.++
T Consensus 51 ~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 51 QFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 34555566777777888888877643
No 282
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.78 E-value=14 Score=36.43 Aligned_cols=103 Identities=18% Similarity=0.244 Sum_probs=50.5
Q ss_pred HHH-HHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHH--hhccCCCCc-cchHHHHHHHHHHhhhhhhhhhh
Q 013645 290 MAV-YGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL--INYSVTSGV-LGTLYPLIMAALLGIGDGVLNTQ 365 (439)
Q Consensus 290 ~~~-~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~l~G~~~~~~~~~ 365 (439)
... +.+...+|+....++.++- +|. +. +..++-.+ ++-++ ..+.+.+-. -+-++..+...++|+..|=..+.
T Consensus 288 ~~l~fN~~d~vG~~~a~~~~~~~-~r~-l~-i~v~lR~l-fiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl 363 (406)
T KOG1479|consen 288 VFLSFNVFDLIGSILAALLTWPD-PRK-LT-IPVLLRLL-FIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSL 363 (406)
T ss_pred HHHHhHHHHHhhhhhhhcccCCC-Cce-eh-HHHHHHHH-HHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhh
Confidence 344 8899999988888776542 343 22 22222222 11111 111111000 01245667778888877666666
Q ss_pred HHHHHHhhccCCchhhHH-HHHHHHHHHHHHH
Q 013645 366 LSALLGILFKHDTEGAFA-QLKVWQCASIAVV 396 (439)
Q Consensus 366 ~~a~~~~~~p~~~~~a~s-~~~~~~~~g~~i~ 396 (439)
...+..+..|++.+.+-| +..+.-..|...|
T Consensus 364 ~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G 395 (406)
T KOG1479|consen 364 IMMYAPKQVKPSEKEAAGNLMVFFLVGGLALG 395 (406)
T ss_pred eehhcCCCCChHHHHHHHHHHHHHHHHHHHHh
Confidence 555655555544433333 3333333444333
No 283
>PRK03612 spermidine synthase; Provisional
Probab=91.64 E-value=12 Score=38.56 Aligned_cols=29 Identities=17% Similarity=0.044 Sum_probs=22.8
Q ss_pred chhhhhHHHHHHHHHhhhhhhHHHHHhhc
Q 013645 154 VIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (439)
Q Consensus 154 ~rg~~~g~~~~~~~~G~~iG~~i~~~l~~ 182 (439)
+-|+..|-.++.+.+|.++|.++.+++..
T Consensus 142 ~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 142 HLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred chhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 45677788888899999999988766543
No 284
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=89.95 E-value=1.1 Score=33.75 Aligned_cols=75 Identities=13% Similarity=0.053 Sum_probs=49.7
Q ss_pred hHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCC
Q 013645 262 GLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVT 339 (439)
Q Consensus 262 g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~ 339 (439)
|+.-..+.+.+|....+.+++.++.|++.+.+.+|-++|++...++.++.++++ ++..+.+...+... .+.++++
T Consensus 5 GigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~-~~~~~l~~~~~~~~--~ma~~~~ 79 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRR-LLRAGLLLTVLSTA--AMALTHS 79 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH-HHHHHHHHHHHHHH--HHHHHhc
Confidence 333333445566555455678888999999999999999999999988755443 44566665554432 3455543
No 285
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=89.35 E-value=6 Score=41.28 Aligned_cols=151 Identities=13% Similarity=0.063 Sum_probs=80.6
Q ss_pred hhhHhhhccCCCCchHH----HHHHHHHHHhhhhhHHHHHHH-hchhHHHHHHhHHHHHHHHh----hh----cc-----
Q 013645 48 QNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRV-LGSKNALILGTTGYWLFVAA----NL----FP----- 109 (439)
Q Consensus 48 ~~~~~~l~~~~~~g~~~----~~~~~~~~~~~~~~~g~l~dr-~G~r~~l~~g~~~~~~~~~~----~~----~~----- 109 (439)
.++...+..+.+..... ...+.+......+.++.++|- +||=+++.++.+++.+.... .. .|
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 45555554443333321 222333334556788999998 57888998888876554321 11 01
Q ss_pred -------------hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchh--hhhHHHHHHHHHhhhhhh
Q 013645 110 -------------SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIG--SFNGEFWGMFASHQFVGN 174 (439)
Q Consensus 110 -------------~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg--~~~g~~~~~~~~G~~iG~ 174 (439)
....++.+.-+..+|.|+.=++..++-+|-.++. .|++++. ..+.++....+.|..++.
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~------~~~~~~~~~~fFnW~yf~~~~g~l~a~ 211 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDEL------DPVEVKGIPSFFNWFYFSQNGGALLAQ 211 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCcc------CcchhhCcccchhHHHHHHHHHHHHHH
Confidence 1235556666777788777666656555555311 1333344 556666655666666655
Q ss_pred HHHHHhhcCCCCCCCCcchHHHHHHHHHHHHHHHHH
Q 013645 175 LITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM 210 (439)
Q Consensus 175 ~i~~~l~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~ 210 (439)
.+-.++-. ..+|.. -|.+..++..++++++
T Consensus 212 t~~vyiq~-----~~~w~l-gf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 212 TVLVYIQD-----NVGWKL-GFGIPTVLNALAILIF 241 (571)
T ss_pred HHHHhhhh-----ccccee-eccHHHHHHHHHHHHH
Confidence 44444321 235654 2444555555555443
No 286
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=86.79 E-value=27 Score=35.09 Aligned_cols=141 Identities=15% Similarity=0.120 Sum_probs=72.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhHhhhccCCCCchHHHHHHHHHHHh----hhhhHHHHHHHhchhHHHHHHhHHHHHHH-
Q 013645 29 DVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTC----FSLVASLVVRVLGSKNALILGTTGYWLFV- 103 (439)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~----~~~~~g~l~dr~G~r~~l~~g~~~~~~~~- 103 (439)
.++..+++..+.+..-.+..+++.....+.+......+++-+..++ +.+..+++.+|+|..|.=.++......+.
T Consensus 259 ~vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~ 338 (432)
T PF06963_consen 259 PVFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLA 338 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Confidence 3444455554444433333344333333335555555555443333 44678999999999998888877543322
Q ss_pred ---Hhhhcchh--hHHHHHHHHhhhHHH--HHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHH
Q 013645 104 ---AANLFPSW--YTMVPASLYLGFAAS--IIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI 176 (439)
Q Consensus 104 ---~~~~~~~~--~~li~~r~i~Gig~g--~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i 176 (439)
.+.+.+.- ...-..-++.|+..+ ++|.-=- .+....++ ..||++||...|...+..++-..+-..+
T Consensus 339 ~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL-~~~qi~Qe------~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 339 LCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDL-AVTQIMQE------NVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhH-HHHHhhcc------cCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 22333221 111112234444433 2343211 11122222 2489999999999887777665555444
No 287
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=83.00 E-value=59 Score=33.32 Aligned_cols=145 Identities=10% Similarity=0.040 Sum_probs=71.0
Q ss_pred cchhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHH-HHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHH
Q 013645 248 DVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMA-VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV 326 (439)
Q Consensus 248 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~ 326 (439)
.|+++++..++++..+..+.. -..-+.+.....|.+.+-++=. ..--++++...+..++++++++.+. +........
T Consensus 23 ~~k~~~l~~m~f~i~f~y~~l-R~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~l-Fy~~~~~F~ 100 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYTIL-RDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKL-FYIIIIPFL 100 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH-HHHHHHHHH
Confidence 356777777777777655443 1222222112235565555422 2223445556667899999987652 222121111
Q ss_pred HH---HHHHHhhc----cCCCC-----------c---------cchHHHHHHHHHHhhhhhhhhh-hHHHHHHhhccCCc
Q 013645 327 VV---FLWILINY----SVTSG-----------V---------LGTLYPLIMAALLGIGDGVLNT-QLSALLGILFKHDT 378 (439)
Q Consensus 327 ~~---~~~~~~~~----~~~~~-----------~---------~~~~~~~~~~~l~G~~~~~~~~-~~~a~~~~~~p~~~ 378 (439)
.. +..++... .++.. . +...+.++.+=+||-- ..+ .-|.+..+.++.++
T Consensus 101 ~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsv---vlSlLFW~fAN~itt~~e 177 (491)
T PF03219_consen 101 GFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSV---VLSLLFWGFANEITTVEE 177 (491)
T ss_pred HHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhcCCHHH
Confidence 11 11111111 01100 0 0012344455555432 223 34677888886665
Q ss_pred h-hhHHHHHHHHHHHHHHHH
Q 013645 379 E-GAFAQLKVWQCASIAVVF 397 (439)
Q Consensus 379 ~-~a~s~~~~~~~~g~~i~~ 397 (439)
+ +-|+.+....++|..++.
T Consensus 178 AKRfYpl~g~ganigli~sG 197 (491)
T PF03219_consen 178 AKRFYPLFGLGANIGLIFSG 197 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 4 368888888888876653
No 288
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=82.50 E-value=9.4 Score=28.72 Aligned_cols=60 Identities=23% Similarity=0.139 Sum_probs=43.2
Q ss_pred hhhhhHhhhccCCCCch----HHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHh
Q 013645 46 AAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA 105 (439)
Q Consensus 46 ~~~~~~~~l~~~~~~g~----~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~ 105 (439)
...++.|.+.+|.+++. ..-+..|..|.++++.+..+.++..+++.+..+.+...+.++.
T Consensus 10 ayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 10 AYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAA 73 (85)
T ss_pred HHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 33455566555555543 3457788899999999999999988888888888766555544
No 289
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=76.12 E-value=39 Score=33.64 Aligned_cols=115 Identities=14% Similarity=0.156 Sum_probs=68.5
Q ss_pred hhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCc-hhh
Q 013645 303 AAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGA 381 (439)
Q Consensus 303 ~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~-~~a 381 (439)
+...++|.++.|. +++.+.+...+... ++.|.++ ...+-++-+++|++.++ +...++++=...|+++ .++
T Consensus 60 ~vflltd~l~Ykp-viil~~~~~i~t~~--lll~~~s-----v~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~v 130 (412)
T PF01770_consen 60 PVFLLTDYLRYKP-VIILQALSYIITWL--LLLFGTS-----VLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKV 130 (412)
T ss_pred HHHHHHHHhhhhH-HHHHHHHHHHHHHH--HHHHHCc-----HHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHH
Confidence 3456788887654 55677666555543 3345533 25567889999998766 6667777766666554 345
Q ss_pred HHHHHHHHH----HHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHHHH
Q 013645 382 FAQLKVWQC----ASIAVVFFIG--PYISLQAMLIVMVVGICVALVGILFL 426 (439)
Q Consensus 382 ~s~~~~~~~----~g~~i~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (439)
.|.-+...- +|..+|-.+- ...++....++..+...++++.-+++
T Consensus 131 ts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 131 TSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 444444443 4444444332 23466666666666666666665554
No 290
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=75.77 E-value=40 Score=33.27 Aligned_cols=144 Identities=14% Similarity=0.088 Sum_probs=68.1
Q ss_pred chhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHHHHHHHHHhhhhhhc-----CCCCcceehhhHHH
Q 013645 249 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTT-----GLPSITFIVSGGAI 323 (439)
Q Consensus 249 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d-----~~~~r~~~~~~g~~ 323 (439)
+++.++..+...+|+..+... ..|..+..++.+.+..+.....+.--+. .+++..+.| |+|||+..++....
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P~sL--KllWaPiVDs~y~k~~GrrksWvvp~q~ 107 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWPFSL--KLLWAPIVDSVYSKRFGRRKSWVVPCQY 107 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhHHHH--HHHHHhhhHHHHHHhhccccceeeehHH
Confidence 345666666677887765543 4443344455555555544333332221 234444555 89999888766555
Q ss_pred HHHHHHHHHHhhccCCCCcc----chHH--HHHHHHHHhhhhhhhhhhHHHH-HHhhccCCchhhHHHHHHHHHHHHHHH
Q 013645 324 AQVVVFLWILINYSVTSGVL----GTLY--PLIMAALLGIGDGVLNTQLSAL-LGILFKHDTEGAFAQLKVWQCASIAVV 396 (439)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~l~G~~~~~~~~~~~a~-~~~~~p~~~~~a~s~~~~~~~~g~~i~ 396 (439)
+....+ +++.+..+.... .+.. ....++++-+..+.--...-.+ +..+-|++-+-|.......|..|.+++
T Consensus 108 llG~~m--llLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 108 LLGLFM--LLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred HHHHHH--HHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence 433322 234443332110 0122 2123344444322222222222 333344444444445666667777766
Q ss_pred H
Q 013645 397 F 397 (439)
Q Consensus 397 ~ 397 (439)
+
T Consensus 186 ~ 186 (510)
T KOG3574|consen 186 N 186 (510)
T ss_pred c
Confidence 4
No 291
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=75.45 E-value=29 Score=32.45 Aligned_cols=87 Identities=13% Similarity=0.078 Sum_probs=49.9
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHhhh
Q 013645 279 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 358 (439)
Q Consensus 279 ~~~~~~~~g~~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 358 (439)
.+++..++|..++.--..+++...+.|.+.||.|||+.-+ .-++.+..+- . -..+++ +-++.+.-.+=|+.
T Consensus 67 YgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracv-tycitYiLsC---i--TKhSpq---YkVLmVGR~LGGia 137 (454)
T KOG4332|consen 67 YGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV-TYCITYILSC---I--TKHSPQ---YKVLMVGRVLGGIA 137 (454)
T ss_pred cCccCCccceeeecccchHHHHHHHHHHHHhhhcccccee-eehHHHHHHH---H--hhcCCc---eEEEeehhhhhhHH
Confidence 3556666666554333344566677889999999886432 2233333221 1 122333 45667777777888
Q ss_pred hhhhhhhHHH-HHHhhc
Q 013645 359 DGVLNTQLSA-LLGILF 374 (439)
Q Consensus 359 ~~~~~~~~~a-~~~~~~ 374 (439)
.+...+.-.+ ++.|--
T Consensus 138 TsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 138 TSLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 7776665554 455543
No 292
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=67.92 E-value=2 Score=41.06 Aligned_cols=105 Identities=14% Similarity=0.111 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCCCcceehhhHHHHHHHHHHHH--HhhccCC----CCcc-chHHHHHHHHHHhhhhhh
Q 013645 289 AMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI--LINYSVT----SGVL-GTLYPLIMAALLGIGDGV 361 (439)
Q Consensus 289 ~~~~~~i~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~~~~~~--~~~~~~~----~~~~-~~~~~~~~~~l~G~~~~~ 361 (439)
.+..+.++..+|+.+.++..-+..+++.+ ....+.-.+. +.+ +....+. +..+ +-+..++..+++|+.+|-
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l-~~~s~~R~~f-iPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWL-WILSLLRFLF-IPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccH-HHHHHHHHHH-HHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 45679999999999887642111122222 2222222211 111 1111111 0000 113456678888998887
Q ss_pred hhhhHHHHHHhhccCCc-hhhHHHHHHHHHHHHHH
Q 013645 362 LNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAV 395 (439)
Q Consensus 362 ~~~~~~a~~~~~~p~~~-~~a~s~~~~~~~~g~~i 395 (439)
..+....+..+..++++ +.+-.+..+....|..+
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~ 299 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFI 299 (309)
T ss_dssp --HHHH-----------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777665443 33322333333344333
No 293
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=65.61 E-value=1.2e+02 Score=30.23 Aligned_cols=32 Identities=28% Similarity=0.463 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHhhhhhhhhhhHHHHHHhhccC
Q 013645 345 TLYPLIMAALLGIGDGVLNTQLSALLGILFKH 376 (439)
Q Consensus 345 ~~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~ 376 (439)
+.+.+++..+.+++++..+..++...+++-++
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ 148 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGLFPSE 148 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhcCCHH
Confidence 45667888999999999999998888875443
No 294
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=63.93 E-value=1.8e+02 Score=29.79 Aligned_cols=175 Identities=13% Similarity=0.049 Sum_probs=88.3
Q ss_pred chhHHHHHHHHHhhHHHHHHHhhcchhhhcccccccchHHHHHHHHH-HHHHHHHhhhhhhcCCCCcceehhhHHHHHHH
Q 013645 249 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGA-FDAICSLAAGRLTTGLPSITFIVSGGAIAQVV 327 (439)
Q Consensus 249 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i-~~~ig~~~~G~l~d~~~~r~~~~~~g~~~~~~ 327 (439)
|+++++.+++++.++.+++.- ..-+.+.....+++.+.++-...-+ ++++..++.+++.+++.+++. +.........
T Consensus 27 ~kflpl~Ll~f~I~~ny~~lR-~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~v-F~~~~~~F~~ 104 (509)
T COG3202 27 KKFLPLALLFFCILFNYNLLR-SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKV-FYIILGFFLG 104 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHH-HHHHHHHHHH
Confidence 567777777777777665542 1222221112455566655432222 566777788999999887653 2221222222
Q ss_pred HHHHH-Hhhcc------CC-----------C-C--c-------cchHHHHHHHHHHhhhhhhhhh-hHHHHHHhhccCCc
Q 013645 328 VFLWI-LINYS------VT-----------S-G--V-------LGTLYPLIMAALLGIGDGVLNT-QLSALLGILFKHDT 378 (439)
Q Consensus 328 ~~~~~-~~~~~------~~-----------~-~--~-------~~~~~~~~~~~l~G~~~~~~~~-~~~a~~~~~~p~~~ 378 (439)
++.+. +..++ ++ + . + +.+...++++=+||.- ..+ .-+....++...++
T Consensus 105 fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgsl---V~S~lFw~faNeitt~~e 181 (509)
T COG3202 105 FFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSL---VLSLLFWQFANEITTIEE 181 (509)
T ss_pred HHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhHHH
Confidence 21110 11121 11 1 0 0 1123456777777653 233 23445666665554
Q ss_pred hh-hHHHHHHHHHHHHHHHHHHhhhh--------------hHHHHHHHHHHHHHHHHHHHHHHHH
Q 013645 379 EG-AFAQLKVWQCASIAVVFFIGPYI--------------SLQAMLIVMVVGICVALVGILFLTI 428 (439)
Q Consensus 379 ~~-a~s~~~~~~~~g~~i~~~i~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (439)
++ =++.++...+++..++-.+..+. .....+.+..+..++.+..+.++++
T Consensus 182 akRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r 246 (509)
T COG3202 182 AKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINR 246 (509)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43 47888888777665543232111 1334445555555666777777666
No 295
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=57.21 E-value=38 Score=28.55 Aligned_cols=76 Identities=20% Similarity=0.197 Sum_probs=45.8
Q ss_pred HHHHHhchhHHHHHHhH---HHHHHHHhhh--------cchhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCC
Q 013645 81 LVVRVLGSKNALILGTT---GYWLFVAANL--------FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (439)
Q Consensus 81 ~l~dr~G~r~~l~~g~~---~~~~~~~~~~--------~~~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~ 149 (439)
.++||.-||..+..|.- +.+.+.+.+. .|+|..++..-++.|+|.-++ .+.+++ .+
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGi---sYGilS---aS------- 122 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGI---SYGILS---AS------- 122 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhh---hhhhcc---cc-------
Confidence 36778877777666552 2233333321 367888888888888776332 122222 22
Q ss_pred CcccchhhhhHHHHHHHHHh
Q 013645 150 HEGTVIGSFNGEFWGMFASH 169 (439)
Q Consensus 150 ~~~~~rg~~~g~~~~~~~~G 169 (439)
++|++.|...|+-.+-.+.+
T Consensus 123 WD~~r~GSllG~~e~~~N~~ 142 (153)
T PF11947_consen 123 WDPEREGSLLGWEEFKRNWG 142 (153)
T ss_pred cCCCCCCCcccHHHHHHhHH
Confidence 27888999999877666654
No 296
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=54.68 E-value=56 Score=34.25 Aligned_cols=63 Identities=14% Similarity=0.140 Sum_probs=47.2
Q ss_pred hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHHhhc
Q 013645 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (439)
Q Consensus 110 ~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~l~~ 182 (439)
+...++.-.++.|+++....+.+.-+.=+-+ |++-|+.+++++.....+|..+...+...+..
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qa----------P~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~ 519 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQA----------PESMKSVATALWLLTVAVGNYLSSVLVSLVQF 519 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667889999999988777554433332 89999999999998888888888776655543
No 297
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=52.92 E-value=1.3e+02 Score=28.06 Aligned_cols=47 Identities=21% Similarity=0.334 Sum_probs=29.2
Q ss_pred hhhHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHH
Q 013645 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWG 164 (439)
Q Consensus 110 ~~~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~ 164 (439)
+...+++..++.|+. .|..|+..+. ..+++. + .+|++.|..+|+.|.
T Consensus 203 ~~~~f~I~~Fl~G~f---~WgiQ~ViL~-lPhEyK---~-~~pk~ig~~Fg~iWG 249 (267)
T PF07672_consen 203 GFAFFYIFGFLAGFF---LWGIQGVILN-LPHEYK---G-YNPKKIGIQFGLIWG 249 (267)
T ss_pred HHHHHHHHHHHHHHH---HHhhhHHHhc-Chhhhc---C-CCcceehhHHHHHHH
Confidence 355666677776654 4888887765 333331 1 256778888887764
No 298
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=42.95 E-value=8.9 Score=36.60 Aligned_cols=58 Identities=10% Similarity=0.096 Sum_probs=2.2
Q ss_pred hHHHHHHHHhhhHHHHHHhhhhhHHHHHhhhhhhhcCCCcccchhhhhHHHHHHHHHhhhhhhHHHHH
Q 013645 112 YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (439)
Q Consensus 112 ~~li~~r~i~Gig~g~~~~~~~~~i~~~~~~~a~~~~~~~~~~rg~~~g~~~~~~~~G~~iG~~i~~~ 179 (439)
+..++.-++.|+..|-+-+....+..+.. ++++|..+-.+...+..+|..+|..++..
T Consensus 249 ~~~~i~~~l~g~TNGyl~tl~m~~~p~~v----------~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 249 AWFIILMLLFGFTNGYLSTLAMMYAPKSV----------SPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp ------------------HHHH----------------------------------------------
T ss_pred HHHHHHHHHHHHccchhhhceeeeCCCcC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444567888888876655555444443 56677666555555556666667665443
No 299
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=33.87 E-value=5.5e+02 Score=26.55 Aligned_cols=25 Identities=20% Similarity=0.317 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCCC
Q 013645 289 AMAVYGAFDAICSLAAGRLTTGLPS 313 (439)
Q Consensus 289 ~~~~~~i~~~ig~~~~G~l~d~~~~ 313 (439)
....+.+.+.++...++++.+.++.
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCC
Confidence 3456777777777777777766653
No 300
>COG4769 Predicted membrane protein [Function unknown]
Probab=30.33 E-value=3.5e+02 Score=23.17 Aligned_cols=46 Identities=17% Similarity=0.143 Sum_probs=32.1
Q ss_pred HhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhhhcchhhHHHHHHHHhhh
Q 013645 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGF 123 (439)
Q Consensus 73 ~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~~~~~~~~li~~r~i~Gi 123 (439)
++.+...-++..++|+|.+-.+|. .+.+.+.+|..+++++|++.|=
T Consensus 87 ~i~S~L~m~~l~~f~~k~~S~lgi-----S~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 87 AILSTLFMYFLYQFGPKYLSLLGI-----SVMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHcCCceEeeeeh-----hhHHHHHHhHHHHHHHHHHHhc
Confidence 345556667899999998744442 3445567888888888888763
No 301
>PF10329 DUF2417: Region of unknown function (DUF2417); InterPro: IPR019431 This entry represents a family of fungal proteins with no known function. In some cases these proteins also contain an alpha/beta hydrolase fold (IPR000073 from INTERPRO).
Probab=29.54 E-value=4.4e+02 Score=24.03 Aligned_cols=10 Identities=40% Similarity=0.833 Sum_probs=7.9
Q ss_pred Cccccccccc
Q 013645 8 DEEAPLVADS 17 (439)
Q Consensus 8 ~~~~~~~~~~ 17 (439)
||++|||.++
T Consensus 1 dEr~~LLp~~ 10 (232)
T PF10329_consen 1 DERTPLLPNR 10 (232)
T ss_pred CCcccCCCCC
Confidence 7888888764
No 302
>CHL00031 psbT photosystem II protein T
Probab=27.47 E-value=1.3e+02 Score=17.97 Aligned_cols=21 Identities=38% Similarity=0.461 Sum_probs=12.0
Q ss_pred HHHHHHHHHH-HHhccCCCccc
Q 013645 200 LGVITLGTIL-MCFLRKEEDKG 220 (439)
Q Consensus 200 ~~~~~l~~~~-~~~l~~~~~~~ 220 (439)
...+.++++. +.+.|||++.+
T Consensus 9 ll~~tlgilFFAI~FRePPri~ 30 (33)
T CHL00031 9 LLVSTLGIIFFAIFFREPPKVP 30 (33)
T ss_pred HHHHHHHHHHHhheecCCCCCC
Confidence 3334455543 36788887643
No 303
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=23.19 E-value=6.4e+02 Score=23.77 Aligned_cols=90 Identities=13% Similarity=0.273 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHhhccCCchh-h--HHHHHHHHHHHHHHHHH-Hh---h--------------hhh
Q 013645 346 LYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEG-A--FAQLKVWQCASIAVVFF-IG---P--------------YIS 404 (439)
Q Consensus 346 ~~~~~~~~l~G~~~~~~~~~~~a~~~~~~p~~~~~-a--~s~~~~~~~~g~~i~~~-i~---~--------------~~~ 404 (439)
..++....+.|++++....+.-.+.+++..++.++ + +|...++.-+...+++- +. | ...
T Consensus 294 symyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS~GiA~~lie~~~~a~~~~k~~~~~r~V~v~ 373 (412)
T KOG4830|consen 294 SYMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLSNGIAYQLIELWTPAYDALKSAIFYRRVMVF 373 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhcccHHHHHHHhcCCcchhhhhhhhheEEEEE
Confidence 35677788899999988888778888888777543 4 56666666555555432 21 1 011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 013645 405 LQAMLIVMVVGICVALVGILFLTIQVEKAFY 435 (439)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (439)
....-.+.+...+++...+.+.|++-.|-.+
T Consensus 374 V~G~~LV~A~~~~l~lA~~~~~E~~~A~~~~ 404 (412)
T KOG4830|consen 374 VPGTCLVLAFLVLLSLAPFKIGERRRARPED 404 (412)
T ss_pred ecchhHHHHHHHHHhhhhHhhhhhhhcCCcc
Confidence 2222234444455666666666666544433
No 304
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.12 E-value=2.2e+02 Score=21.74 Aligned_cols=52 Identities=15% Similarity=0.027 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013645 381 AFAQLKVWQCASIAVVFFIGPY-ISLQAMLIVMVVGICVALVGILFLTIQVEK 432 (439)
Q Consensus 381 a~s~~~~~~~~g~~i~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (439)
|-=.+++.-.+++.+|++++-. -...+..++..+.+++.++..+-.-..++|
T Consensus 24 aEr~~q~ilti~aiVg~i~Gf~~Qqls~tvy~vg~~~v~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 24 AERFQQLILTIGAIVGFIYGFAQQQLSVTVYIVGAGFVFTLLITLPPWPWYRR 76 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhc
Confidence 3336777777888888877643 356667777777777777766554444444
No 305
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.72 E-value=4.1e+02 Score=21.00 Aligned_cols=28 Identities=11% Similarity=0.119 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhhhhhHH-HHHHHHHHHHH
Q 013645 390 CASIAVVFFIGPYISLQ-AMLIVMVVGIC 417 (439)
Q Consensus 390 ~~g~~i~~~i~~~~~~~-~~~~~~~~~~~ 417 (439)
.+|+.+||+++-+.+.. |.++++..+.+
T Consensus 57 lVGa~iG~llD~~agTsPwglIv~lllGf 85 (116)
T COG5336 57 LVGAGIGWLLDKFAGTSPWGLIVFLLLGF 85 (116)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 46788889888775332 33343333333
No 306
>PF09819 ABC_cobalt: ABC-type cobalt transport system, permease component; InterPro: IPR017195 This group represents a predicted ABC-type thiamin-related transport system, permease component 1. It is probably part of the ABC transporter complex ykoCDEF that could transport hydroxymethylpyrimidine (HMP) and/or thiamine. It could also transport other HMP-containing products. The complex is composed of two ATP-binding proteins (ykoD), two transmembrane proteins (ykoC and ykoE) and a solute-binding protein (ykoF).
Probab=21.65 E-value=4.5e+02 Score=21.47 Aligned_cols=67 Identities=19% Similarity=0.139 Sum_probs=37.6
Q ss_pred CchHHHHHHHHHHHhhhhhHHHHHHHhchhHHHHHHhHHHHHHHHhhhcchhhHHHHHHHHhhhHHHHHH
Q 013645 60 LGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIW 129 (439)
Q Consensus 60 ~g~~~~~~~~~~~~~~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~~~~~~~~~~li~~r~i~Gig~g~~~ 129 (439)
.+.....+.++.+.+..+++..+.+|-|.-.. +-+.-++.-...-.+.-...++..++||++.-..+
T Consensus 35 ~~p~~~~~~~GlW~~a~~la~~iiRKPGaa~~---~e~laa~ve~~~G~~~G~~~ii~gl~QGlg~El~F 101 (129)
T PF09819_consen 35 LGPLAGGILYGLWFMAGPLAAYIIRKPGAALL---AELLAALVEMLLGSQWGIMTIISGLVQGLGAELGF 101 (129)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhCCCcHHHH---HHHHHHHHHHHhcCcchHHHHHHHHHhHHHHHHHH
Confidence 34445567788888888999999999886532 11111111010011222234567888998875543
No 307
>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=21.34 E-value=1.8e+02 Score=21.84 Aligned_cols=21 Identities=24% Similarity=0.301 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHhhhhcCC
Q 013645 417 CVALVGILFLTIQVEKAFYSP 437 (439)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~ 437 (439)
++..+..++...+.||+..+|
T Consensus 44 Fil~VilwfvCC~kRkrsRrP 64 (94)
T PF05393_consen 44 FILLVILWFVCCKKRKRSRRP 64 (94)
T ss_pred HHHHHHHHHHHHHHhhhccCC
Confidence 445555667777776664443
No 308
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=20.73 E-value=4.7e+02 Score=24.18 Aligned_cols=17 Identities=18% Similarity=0.622 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHhccCC
Q 013645 200 LGVITLGTILMCFLRKE 216 (439)
Q Consensus 200 ~~~~~l~~~~~~~l~~~ 216 (439)
.++.+++..++.++|.+
T Consensus 122 ~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 122 VALVLVSGIIFSFIKSE 138 (254)
T ss_pred HHHHHHHHHheeeecCC
Confidence 33344555555566543
No 309
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=20.23 E-value=58 Score=26.58 Aligned_cols=20 Identities=25% Similarity=0.296 Sum_probs=7.9
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 013645 193 TLLFIVFLGVITLGTILMCF 212 (439)
Q Consensus 193 ~~~~~~~~~~~~l~~~~~~~ 212 (439)
|++|+++.++.++.++++.+
T Consensus 2 W~l~~iii~~i~l~~~~~~~ 21 (130)
T PF12273_consen 2 WVLFAIIIVAILLFLFLFYC 21 (130)
T ss_pred eeeHHHHHHHHHHHHHHHHH
Confidence 33454444433333333333
Done!