BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013651
(439 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 209/439 (47%), Gaps = 32/439 (7%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSP-YYEYWR 59
+ +R+G +P +V+S + ++ L G F RP + L NG ++FSP W
Sbjct: 47 LQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRP-DLYTFTLISNGQSMSFSPDSGPVWA 105
Query: 60 EIRKICVIHL----FNSNRAKKFRPIREDEVSR----MMEKISKSVAASNPVNVSEVMMS 111
R++ L S+ A E+ VS+ ++ + + +A N ++
Sbjct: 106 ARRRLAQNGLKSFSIASDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVV 165
Query: 112 LTSTIICRIGFGKRYDED-KATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQR 170
+ +IC I FG+RYD + + + E + S D+ P++ ++ +
Sbjct: 166 SVTNVICAICFGRRYDHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPS----- 220
Query: 171 LQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLL------QIRKNCGFKVDLTL 224
N+F++L+ + M + + + E DI D L+ Q+ +N V L+
Sbjct: 221 -LNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENA--NVQLSD 277
Query: 225 DHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQ 284
+ I +++++F AG DT + W++ YL+ NPR +K+Q E+ ++IG ++ D
Sbjct: 278 EKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRR-PRLSDRS 336
Query: 285 ELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWEN 344
L Y++A + ET R VP IP T + + G+ IP VFVN W I D + W N
Sbjct: 337 HLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVN 396
Query: 345 PEEFYPERFI--DSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEM 402
P EF PERF+ D ID K ++I FG G+R C G + V L LA LL + ++ +
Sbjct: 397 PSEFLPERFLTPDGAID-KVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSV 455
Query: 403 PLGIKSHDLDFDVLLGIAM 421
PLG+K +D + G+ M
Sbjct: 456 PLGVK---VDMTPIYGLTM 471
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 206/440 (46%), Gaps = 35/440 (7%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSP-YYEYWR 59
+ +R+G +P LV+S + ++ L G F RP + L +G L FS W
Sbjct: 52 LQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRP-DLYTSTLITDGQSLTFSTDSGPVWA 110
Query: 60 EIRKIC--VIHLFN--SNRAKKFRPIREDEVSR----MMEKISKSVAASNPVNVSEVMMS 111
R++ ++ F+ S+ A E+ VS+ ++ ++ + +A + ++
Sbjct: 111 ARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVV 170
Query: 112 LTSTIICRIGFGKRYDE--DKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQ 169
+ +I + FG+ + E D+ S H + ET S D+FP++ ++ +Q
Sbjct: 171 SVANVIGAMCFGQHFPESSDEMLSLVKNTHEFV-ETASSGNPLDFFPILRYLP--NPALQ 227
Query: 170 RLQNSFQELDRFYQELMDEH---LDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTL-- 224
R + Q F Q+ + EH D N + DI L + K G + L
Sbjct: 228 RFKAFNQRFLWFLQKTVQEHYQDFDKNSVR-------DITGALFKHSKK-GPRASGNLIP 279
Query: 225 -DHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDV 283
+ I ++ ++F AG DT + W++ YL+ P +K+Q E+ ++IG + D
Sbjct: 280 QEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERR-PRLSDR 338
Query: 284 QELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWE 343
+L YL+A + ET R +P IP T + ++G+ IP K VFVN W + DPE WE
Sbjct: 339 PQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWE 398
Query: 344 NPEEFYPERFI--DSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 401
+P EF PERF+ D K +++ FG G+R C G + + L LA LL + ++
Sbjct: 399 DPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFS 458
Query: 402 MPLGIKSHDLDFDVLLGIAM 421
+P G+K +D + G+ M
Sbjct: 459 VPPGVK---VDLTPIYGLTM 475
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 197/417 (47%), Gaps = 28/417 (6%)
Query: 2 SLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREI 61
S+R+G +++V ++AKE+L G F RP S N +AF+ +W+
Sbjct: 47 SVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLH 106
Query: 62 RKICV--IHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICR 119
R++ + LF +K I E+S + + ++ S +++S + + +I
Sbjct: 107 RRLAMATFALFKDGD-QKLEKIICQEISTLCDMLATHNGQS--IDISFPVFVAVTNVISL 163
Query: 120 IGFGKRYDEDKATSGRSRFHTL--LNETLVSFFVPDYF-PLIGWIDKLTG-MMQRLQNSF 175
I F Y +G + + NE ++ D L+ W+ +++L++
Sbjct: 164 ICFNTSY-----KNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHV 218
Query: 176 QELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIR-----KNCGFKVD---LTLDHI 227
+ + ++++ + + R+ S +++D L+Q + N G D L+ +HI
Sbjct: 219 KIRNDLLNKILENYKEKFRSDS----ITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHI 274
Query: 228 KAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELH 287
+ ++F AG +T+ + V W + +L+ NP+ KK+ EI +G ++ D L
Sbjct: 275 LTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRT-PTISDRNRLL 333
Query: 288 YLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEE 347
L+A ++E +RL+P P+LIP + I +A+ T V +N WA+ + + W P++
Sbjct: 334 LLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQ 393
Query: 348 FYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 403
F PERF++ + +PFGAG R C G + + L +A LL +FD E+P
Sbjct: 394 FMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVP 450
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 181/415 (43%), Gaps = 47/415 (11%)
Query: 3 LRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIR 62
LRLG +V++S + +E + + F RP + + +S D++ Y W+ +
Sbjct: 62 LRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHK 121
Query: 63 KICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGF 122
K+ L R+ P + E++ V A PV + + LT +IIC + F
Sbjct: 122 KLTRSALLLGTRSS-MEPWVDQLTQEFCERMR--VQAGAPVTIQKEFSLLTCSIICYLTF 178
Query: 123 GKRYDEDKATSGRSRFHTLLNETLVSF---------FVP--DYFPLIGWIDKLTGMMQRL 171
G + ED FH + + + ++ VP +FP G + RL
Sbjct: 179 GNK--EDTLVHA---FHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPG--------LWRL 225
Query: 172 QNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQ------IRKNCGFKVDLTLD 225
+ + + D ++ + H + Q D+ D +LQ + + G L
Sbjct: 226 KQAIENRDHMVEKQLRRH----KESMVAGQWRDMTDYMLQGVGRQRVEEGPG---QLLEG 278
Query: 226 HIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGF--VNEDDV 283
H+ ++++F+ G +T+A+T+ WA+ +L+ +P +++Q E+ +G V D
Sbjct: 279 HVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDR 338
Query: 284 QELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWE 343
L L A + E +RL+P VPL +P T + I GY IP V N D WE
Sbjct: 339 ARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWE 398
Query: 344 NPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 398
P EF P+RF++ G + + FG G R+C G ++ + + LA LL F
Sbjct: 399 QPHEFRPDRFLEP-----GANPSALAFGCGARVCLGESLARLELFVVLARLLQAF 448
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 189/426 (44%), Gaps = 44/426 (10%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYN----GLDLAFSPYYE 56
SL+L ++P +V++ + +E L THG RP Q L + G+ LA Y
Sbjct: 47 FSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLAR--YGP 104
Query: 57 YWREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVA--ASNPVNVSEVMMSLTS 114
WRE R+ V L N KK E V+ + + A + P + ++ S
Sbjct: 105 AWREQRRFSVSTLRNLGLGKK---SLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVS 161
Query: 115 TIICRIGFGKRYDEDK---------ATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLT 165
+I + G+R++ D A G L E L + P++ I L
Sbjct: 162 NVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVL------NAVPVLLHIPALA 215
Query: 166 GMMQRLQNSF-QELDRFYQELMDEH---LDPNRTKSELAQQEDIIDVLLQIRKNCGF-KV 220
G + R Q +F +LD EL+ EH DP + +L + L ++ K G +
Sbjct: 216 GKVLRFQKAFLTQLD----ELLTEHRMTWDPAQPPRDLTEA-----FLAEMEKAKGNPES 266
Query: 221 DLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNE 280
++++ V+ ++F AG T++ T+ W + ++ +P ++VQ EI +IG +
Sbjct: 267 SFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRR-PEM 325
Query: 281 DDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPE 340
D + Y AV+ E R VPL + T + + G+ IP T + N ++ +D
Sbjct: 326 GDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEA 385
Query: 341 AWENPEEFYPERFIDSCIDF-KGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 399
WE P F+PE F+D+ F K + F +PF AGRR C G + + L +LL F
Sbjct: 386 VWEKPFRFHPEHFLDAQGHFVKPEAF--LPFSAGRRACLGEPLARMELFLFFTSLLQHFS 443
Query: 400 WEMPLG 405
+ +P G
Sbjct: 444 FSVPTG 449
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 188/426 (44%), Gaps = 44/426 (10%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYN----GLDLAFSPYYE 56
SL+L ++P +V++ + +E L THG RP Q L + G+ LA Y
Sbjct: 47 FSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLAR--YGP 104
Query: 57 YWREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVA--ASNPVNVSEVMMSLTS 114
WRE R+ V L N KK E V+ + + A + P + ++ S
Sbjct: 105 AWREQRRFSVSTLRNLGLGKK---SLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVS 161
Query: 115 TIICRIGFGKRYDEDK---------ATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLT 165
+I + G+R++ D A G L E L + P+ I L
Sbjct: 162 NVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVL------NAVPVDRHIPALA 215
Query: 166 GMMQRLQNSF-QELDRFYQELMDEH---LDPNRTKSELAQQEDIIDVLLQIRKNCGF-KV 220
G + R Q +F +LD EL+ EH DP + +L + L ++ K G +
Sbjct: 216 GKVLRFQKAFLTQLD----ELLTEHRMTWDPAQPPRDLTEA-----FLAEMEKAKGNPES 266
Query: 221 DLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNE 280
++++ V+ ++F AG T++ T+ W + ++ +P ++VQ EI +IG +
Sbjct: 267 SFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRR-PEM 325
Query: 281 DDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPE 340
D + Y AV+ E R VPL + T + + G+ IP T + N ++ +D
Sbjct: 326 GDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEA 385
Query: 341 AWENPEEFYPERFIDSCIDF-KGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 399
WE P F+PE F+D+ F K + F +PF AGRR C G + + L +LL F
Sbjct: 386 VWEKPFRFHPEHFLDAQGHFVKPEAF--LPFSAGRRACLGEPLARMELFLFFTSLLQHFS 443
Query: 400 WEMPLG 405
+ +P G
Sbjct: 444 FSVPTG 449
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 186/420 (44%), Gaps = 35/420 (8%)
Query: 3 LRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIR 62
+RLG P +V++ + + L G F RP S A ++ G +AF Y E+W+ R
Sbjct: 47 IRLGSCPIVVLNGERAIHQALVQQGSAFADRP-SFASFRVVSGGRSMAFGHYSEHWKVQR 105
Query: 63 KICVIHLFNS-NRAKKFRPIREDEV-SRMMEKISKSVAAS------NPVNVSEVMMSLTS 114
+ + N R + R + E V S E ++ V S +P ++ V ++
Sbjct: 106 RAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVM 165
Query: 115 TIICRIGFGKRYDEDKATSGRSRFHTLLNE------TLVSFFVPDYFPLIGWIDKLTGMM 168
+ +C FG RY D F LL+ T+ + + D P W+ +
Sbjct: 166 SAVC---FGCRYSHDD-----PEFRELLSHNEEFGRTVGAGSLVDVMP---WLQYFPNPV 214
Query: 169 QRLQNSFQELDR-FYQELMDEHLDPNRTKSELAQQEDIIDV-LLQIRKNC-----GFKVD 221
+ + F++L+R F ++D+ L + A D++D +L K G
Sbjct: 215 RTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGAR 274
Query: 222 LTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNED 281
L L+++ A + ++F A DT + + W + + P +VQ E+ ++G ++
Sbjct: 275 LDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDR-LPCMG 333
Query: 282 DVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEA 341
D L Y+ A + E MR VP+ IP T + GY IP T VFVN W++ DP
Sbjct: 334 DQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLK 393
Query: 342 WENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDW 400
W NPE F P RF+D + K ++ F G+R C G + + L ++ L ++ D+
Sbjct: 394 WPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDF 453
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 198/423 (46%), Gaps = 30/423 (7%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
++ LG P +V+ +E L F R +A + G + F+ E WR
Sbjct: 47 FTVYLGSRPVVVLCGTDAIREALVDQAEAFSGR-GKIAVVDPIFQGYGVIFA-NGERWRA 104
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSR-MMEKISKSVAASNPVNVSEVMMSLTSTIICR 119
+R+ + + + K+ R E +R ++E++ KS A ++ + + S+TS IIC
Sbjct: 105 LRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL--LDNTLLFHSITSNIICS 162
Query: 120 IGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLI-GWIDKLTGMMQRLQNSFQEL 178
I FGKR+D R + +L+S F F L G++ G +++ + QE+
Sbjct: 163 IVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEI 222
Query: 179 DRFYQELMDEH---LDPNRTKSELAQQEDIIDV-LLQIRKNCGFKVDLT--LDHIKAVL- 231
+ F + +++H LDP+ + D IDV LL++ K+ K D + H +L
Sbjct: 223 NTFIGQSVEKHRATLDPSNPR-------DFIDVYLLRMEKD---KSDPSSEFHHQNLILT 272
Query: 232 -MNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLK 290
+++F AG +T++ T+ + ++K P ++VQ EI +IG ++ DD ++ Y
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTD 331
Query: 291 AVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYP 350
AV+ E RL +P +P + GY IP T VF + DP +E P F P
Sbjct: 332 AVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNP 391
Query: 351 ERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLAL--ANLLYKFDWEMPLGIKS 408
F+D+ K ++ +PF G+RIC L GIA +L L +L F P+ +
Sbjct: 392 GHFLDANGALK-RNEGFMPFSLGKRIC--LGEGIARTELFLFFTTILQNFSIASPVPPED 448
Query: 409 HDL 411
DL
Sbjct: 449 IDL 451
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 195/421 (46%), Gaps = 26/421 (6%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
++ LG P +V+ +E L F R +A + G + F+ E WR
Sbjct: 47 FTVYLGSRPVVVLCGTDAIREALVDQAEAFSGR-GKIAVVDPIFQGYGVIFA-NGERWRA 104
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSR-MMEKISKSVAASNPVNVSEVMMSLTSTIICR 119
+R+ + + + K+ R E +R ++E++ KS A ++ + + S+TS IIC
Sbjct: 105 LRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL--LDNTLLFHSITSNIICS 162
Query: 120 IGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLI-GWIDKLTGMMQRLQNSFQEL 178
I FGKR+D R + +L+S F F L G++ G +++ + QE+
Sbjct: 163 IVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEI 222
Query: 179 DRFYQELMDEH---LDPNRTKSELAQQEDIIDV-LLQIRKNCGFKVDLT--LDHIKAVL- 231
+ F + +++H LDP+ + D IDV LL++ K+ K D + H +L
Sbjct: 223 NTFIGQSVEKHRATLDPSNPR-------DFIDVYLLRMEKD---KSDPSSEFHHQNLILT 272
Query: 232 -MNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLK 290
+++F AG +T++ T+ + ++K P ++VQ EI +IG ++ DD ++ Y
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTD 331
Query: 291 AVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYP 350
AV+ E RL +P +P + GY IP T VF + DP +E P F P
Sbjct: 332 AVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNP 391
Query: 351 ERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGIKSHD 410
F+D+ K ++ +PF G+RIC G + + L +L F P+ + D
Sbjct: 392 GHFLDANGALK-RNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASPVPPEDID 450
Query: 411 L 411
L
Sbjct: 451 L 451
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 198/423 (46%), Gaps = 30/423 (7%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
++ LG P +V+ +E L F R +A + G + F+ E WR
Sbjct: 47 FTVYLGSRPVVVLCGTDAIREALVDQAEAFSGR-GKIAVVDPIFQGYGVIFA-NGERWRA 104
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSR-MMEKISKSVAASNPVNVSEVMMSLTSTIICR 119
+R+ + + + K+ R E +R ++E++ KS A ++ + + S+TS IIC
Sbjct: 105 LRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL--LDNTLLFHSITSNIICS 162
Query: 120 IGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLI-GWIDKLTGMMQRLQNSFQEL 178
I FGKR+D R + +L+S F F L G++ G +++ + QE+
Sbjct: 163 IVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEI 222
Query: 179 DRFYQELMDEH---LDPNRTKSELAQQEDIIDV-LLQIRKNCGFKVDLT--LDHIKAVL- 231
+ F + +++H LDP+ + D IDV LL++ K+ K D + H +L
Sbjct: 223 NTFIGQSVEKHRATLDPSNPR-------DFIDVYLLRMEKD---KSDPSSEFHHQNLILT 272
Query: 232 -MNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLK 290
+++F AG +T++ T+ + ++K P ++VQ EI +IG ++ DD ++ Y
Sbjct: 273 VLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTD 331
Query: 291 AVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYP 350
AV+ E RL +P +P + GY IP T VF + DP +E P F P
Sbjct: 332 AVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNP 391
Query: 351 ERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLAL--ANLLYKFDWEMPLGIKS 408
F+D+ K ++ +PF G+RIC L GIA +L L +L F P+ +
Sbjct: 392 GHFLDANGALK-RNEGFMPFSLGKRIC--LGEGIARTELFLFFTTILQNFSIASPVPPED 448
Query: 409 HDL 411
DL
Sbjct: 449 IDL 451
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 198/423 (46%), Gaps = 30/423 (7%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
++ LG P +V+ +E L F R +A + G + F+ E WR
Sbjct: 47 FTVYLGSRPVVVLCGTDAIREALVDQAEAFSGR-GKIAVVDPIFQGYGVIFA-NGERWRA 104
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSR-MMEKISKSVAASNPVNVSEVMMSLTSTIICR 119
+R+ + + + K+ R E +R ++E++ KS A ++ + + S+TS IIC
Sbjct: 105 LRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL--LDNTLLFHSITSNIICS 162
Query: 120 IGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLI-GWIDKLTGMMQRLQNSFQEL 178
I FGKR+D R + +L+S F F L G++ G +++ + QE+
Sbjct: 163 IVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEI 222
Query: 179 DRFYQELMDEH---LDPNRTKSELAQQEDIIDV-LLQIRKNCGFKVDLT--LDHIKAVL- 231
+ F + +++H LDP+ + D IDV LL++ K+ K D + H +L
Sbjct: 223 NTFIGQSVEKHRATLDPSNPR-------DFIDVYLLRMEKD---KSDPSSEFHHQNLILT 272
Query: 232 -MNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLK 290
+++F AG +T++ T+ + ++K P ++VQ EI +IG ++ DD ++ Y
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTD 331
Query: 291 AVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYP 350
AV+ E RL +P +P + GY IP T VF + DP +E P F P
Sbjct: 332 AVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNP 391
Query: 351 ERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLAL--ANLLYKFDWEMPLGIKS 408
F+D+ K ++ +PF G+RIC L GIA +L L +L F P+ +
Sbjct: 392 GHFLDANGALK-RNEGFMPFSLGKRIC--LGEGIARTELFLFFTTILQNFSIASPVPPED 448
Query: 409 HDL 411
DL
Sbjct: 449 IDL 451
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 198/423 (46%), Gaps = 30/423 (7%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
++ LG P +V+ +E L F R +A + G + F+ E WR
Sbjct: 47 FTVYLGSRPVVVLCGTDAIREALVDQAEAFSGR-GKIAVVDPIFQGYGVIFA-NGERWRA 104
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSR-MMEKISKSVAASNPVNVSEVMMSLTSTIICR 119
+R+ + + + K+ R E +R ++E++ KS A ++ + + S+TS IIC
Sbjct: 105 LRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL--LDNTLLFHSITSNIICS 162
Query: 120 IGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLI-GWIDKLTGMMQRLQNSFQEL 178
I FGKR+D R + +L+S F F L G++ G +++ + QE+
Sbjct: 163 IVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEI 222
Query: 179 DRFYQELMDEH---LDPNRTKSELAQQEDIIDV-LLQIRKNCGFKVDLT--LDHIKAVL- 231
+ F + +++H LDP+ + D IDV LL++ K+ K D + H +L
Sbjct: 223 NTFIGQSVEKHRATLDPSNPR-------DFIDVYLLRMEKD---KSDPSSEFHHQNLILT 272
Query: 232 -MNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLK 290
+++F AG +T++ T+ + ++K P ++VQ EI +IG ++ DD ++ Y
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTD 331
Query: 291 AVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYP 350
AV+ E RL +P +P + GY IP T VF + DP +E P F P
Sbjct: 332 AVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNP 391
Query: 351 ERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLAL--ANLLYKFDWEMPLGIKS 408
F+D+ K ++ +PF G+RIC L GIA +L L +L F P+ +
Sbjct: 392 GHFLDANGALK-RNEGFMPFSLGKRIC--LGEGIARTELFLFFTTILQNFSIASPVPPED 448
Query: 409 HDL 411
DL
Sbjct: 449 IDL 451
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 190/411 (46%), Gaps = 26/411 (6%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
++ G +P +V + KE L +G +F R S Q+++ GL + S + W+E
Sbjct: 47 FTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRIT-KGLGI-ISSNGKRWKE 104
Query: 61 IRKICVIHLFNSNRAKKFRPIR-EDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICR 119
IR+ + L N K+ R ++E ++E++ K+ A+ P + + ++ +IC
Sbjct: 105 IRRFSLTTLRNFGMGKRSIEDRVQEEAHCLVEELRKTKAS--PCDPTFILGCAPCNVICS 162
Query: 120 IGFGKRYD--EDKATSGRSRFHT---LLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNS 174
+ F KR+D + + RF+ +LN + V + FPL+ ID G ++ +
Sbjct: 163 VVFQKRFDYKDQNFLTLMKRFNENFRILNSPWIQ--VCNNFPLL--IDCFPGTHNKVLKN 218
Query: 175 FQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLL----QIRKNCGFKVDLTLDHIKAV 230
+ +E + EH + ++ D ID L Q + N K + ++++
Sbjct: 219 VALTRSYIREKVKEH----QASLDVNNPRDFIDCFLIKMEQEKDNQ--KSEFNIENLVGT 272
Query: 231 LMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLK 290
+ ++FVAG +T++ T+ + + L+K+P KVQ EI +IG ++ +D + Y
Sbjct: 273 VADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDR-SHMPYTD 331
Query: 291 AVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYP 350
AVV E R VP +P Y IP T + ++ D + + NP F P
Sbjct: 332 AVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDP 391
Query: 351 ERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 401
F+D +FK + +PF AG+RIC G + + L L +L F+ +
Sbjct: 392 GHFLDKNGNFKKSDY-FMPFSAGKRICAGEGLARMELFLFLTTILQNFNLK 441
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 186/408 (45%), Gaps = 24/408 (5%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
+L G P +V+ + KE L G +F R ++ + G + FS + W+E
Sbjct: 46 FTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERAN-RGFGIVFS-NGKKWKE 103
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSR-MMEKISKSVAASNPVNVSEVMMSLTSTIICR 119
IR+ ++ L N K+ R E +R ++E++ K+ A+ P + + ++ +IC
Sbjct: 104 IRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKAS--PCDPTFILGCAPCNVICS 161
Query: 120 IGFGKRYDEDKATSGRSRFHTLLN------ETLVSFFVPDYFPLIGWIDKLTGMMQRLQN 173
I F KR+D +F L+ E L S ++ Y +D G +L
Sbjct: 162 IIFHKRFDYKD-----QQFLNLMEKLNENIEILSSPWIQVYNNFPALLDYFPGTHNKLLK 216
Query: 174 SFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQI--RKNCGFKVDLTLDHIKAVL 231
+ + + E + EH + ++ +D ID L ++ + T++ ++
Sbjct: 217 NVAFMKSYILEKVKEH----QESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTA 272
Query: 232 MNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKA 291
+++F AG +T++ T+ +A+ L+K+P KVQ EI +IG N+ +D + Y A
Sbjct: 273 VDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDR-SHMPYTDA 331
Query: 292 VVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPE 351
VV E R +P +P Y IP T + ++ ++ D + + NPE F P
Sbjct: 332 VVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPH 391
Query: 352 RFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 399
F+D +FK + +PF AG+RIC G + + L L ++L F+
Sbjct: 392 HFLDEGGNFKKSKY-FMPFSAGKRICVGEALAGMELFLFLTSILQNFN 438
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 194/407 (47%), Gaps = 21/407 (5%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
++ LG P++V+ + KE L G +F R + +K+S GL +AFS + W+E
Sbjct: 47 FTVYLGMKPTVVLHGYEAVKEALVDLGEEFAGRGSVPILEKVS-KGLGIAFS-NAKTWKE 104
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSR-MMEKISKSVAASNPVNVSEVMMSLTSTIICR 119
+R+ ++ L N K+ R E +R ++E++ K+ A+ P + + ++ +IC
Sbjct: 105 MRRFSLMTLRNFGMGKRSIEDRIQEEARCLVEELRKTNAS--PCDPTFILGCAPCNVICS 162
Query: 120 IGFGKRYD--EDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
+ F R+D +++ H + E L + ++ Y +D G+ + L +
Sbjct: 163 VIFHNRFDYKDEEFLKLMESLHENV-ELLGTPWLQVYNNFPALLDYFPGIHKTLLKNADY 221
Query: 178 LDRFYQELMDEH---LDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNV 234
+ F E + EH LD N + D ID L I+ ++ TL+ + + ++
Sbjct: 222 IKNFIMEKVKEHQKLLDVNNPR-------DFIDCFL-IKMEQENNLEFTLESLVIAVSDL 273
Query: 235 FVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVK 294
F AG +T++ T+ +++ L+K+P +VQ EI +IG ++ +D + Y AV+
Sbjct: 274 FGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDR-SRMPYTDAVIH 332
Query: 295 ETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFI 354
E R +P +P + Y IP T + + ++ D +A+ NP+ F P F+
Sbjct: 333 EIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFL 392
Query: 355 DSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 401
D +FK + +PF AG+R+C G + + L L ++L F +
Sbjct: 393 DESGNFKKSDY-FMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQ 438
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 192/420 (45%), Gaps = 24/420 (5%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
++ LG P +++ V+ +E L F R +A + G + F+ W+
Sbjct: 47 FTVHLGPRPVVMLCGVEAIREALVDKAEAFSGR-GKIAMVDPFFRGYGVIFA-NGNRWKV 104
Query: 61 IRKICVIHLFNSNRAKKFRPIR-EDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICR 119
+R+ V + + K+ R ++E ++E++ KS A ++ + + S+T+ IIC
Sbjct: 105 LRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGAL--MDPTFLFQSITANIICS 162
Query: 120 IGFGKR--YDEDKATSGRSRFHTLLNETLVSFFVPDYFPLI-GWIDKLTGMMQRLQNSFQ 176
I FGKR Y + + + F+ +L+S F L G++ G +++ + Q
Sbjct: 163 IVFGKRFHYQDQEFLKMLNLFYQTF--SLISSVFGQLFELFSGFLKHFPGAHRQVYKNLQ 220
Query: 177 ELDRFYQELMDEH---LDPNRTKSELAQQEDIIDV-LLQIRK-NCGFKVDLTLDHIKAVL 231
E++ + +++H LDP+ + D+ID LL + K + + ++
Sbjct: 221 EINAYIGHSVEKHRETLDPSAPR-------DLIDTYLLHMEKEKSNAHSEFSHQNLNLNT 273
Query: 232 MNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKA 291
+++F AG +T++ T+ + ++K P ++V EI +IG ++ D ++ Y +A
Sbjct: 274 LSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRP-PELHDRAKMPYTEA 332
Query: 292 VVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPE 351
V+ E R +P+ +P Q GY IP T VF+ DP +E P+ F P+
Sbjct: 333 VIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPD 392
Query: 352 RFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGIKSHDL 411
F+D+ K IPF G+RIC G + A + L +L F P+ + DL
Sbjct: 393 HFLDANGALKKTE-AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDL 451
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 191/417 (45%), Gaps = 42/417 (10%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
+L G P +V+ + KE L G +F R ++ + G + FS + W+E
Sbjct: 48 FTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERAN-RGFGIVFS-NGKKWKE 105
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSR-MMEKISKSVAASNPVNVSEVMMSLTSTIICR 119
IR+ ++ L N K+ R E +R ++E++ K+ A+ P + + ++ +IC
Sbjct: 106 IRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKAS--PCDPTFILGCAPCNVICS 163
Query: 120 IGFGKRYDEDKATSGRSRFHTL---LNETL----------VSFFVP--DYFPLIGWIDKL 164
I F KR+D +F L LNE + + F P DYFP G +KL
Sbjct: 164 IIFHKRFDYKD-----QQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP--GTHNKL 216
Query: 165 TGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQI--RKNCGFKVDL 222
+ +++ E + +QE MD + +D ID L ++ +
Sbjct: 217 LKNVAFMKSYILEKVKEHQESMD-----------MNNPQDFIDCFLMKMEKEKHNQPSEF 265
Query: 223 TLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDD 282
T++ ++ +++F AG +T++ T+ +A+ L+K+P KVQ EI +IG N+ +D
Sbjct: 266 TIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDR 325
Query: 283 VQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAW 342
+ Y AVV E R +P +P Y IP T + ++ ++ D + +
Sbjct: 326 -SHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEF 384
Query: 343 ENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 399
NPE F P F+D +FK + +PF AG+RIC G + + L L ++L F+
Sbjct: 385 PNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEALAGMELFLFLTSILQNFN 440
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 186/423 (43%), Gaps = 31/423 (7%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
+L +G +V+ K KE L + +F R A G+ P W++
Sbjct: 47 FTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHRDRGIIFNNGPT---WKD 103
Query: 61 IRKICVIHLFNSNRAKKFRPIR-EDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICR 119
IR+ + L N K+ R + E ++E + K+ P + + ++ +I
Sbjct: 104 IRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKT--QGQPFDPTFLIGCAPCNVIAD 161
Query: 120 IGFGKRYDEDKATSGRSRFHTLLNETLVSFFVP-----DYFPLIGWIDKLTGMMQRLQNS 174
I F K +D + R + L NE P + FP ++ L G +++ +
Sbjct: 162 ILFRKHFDYNDEKFLRLMY--LFNENFHLLSTPWLQLYNNFP--SFLHYLPGSHRKVIKN 217
Query: 175 FQELDRFYQELMDEH---LDPNRTKSELAQQEDIIDVLL---QIRKNCGFKVDLTLDHIK 228
E+ + E + EH LDPN + D+ D LL + K+ ++ T+D I
Sbjct: 218 VAEVKEYVSERVKEHHQSLDPNCPR-------DLTDCLLVEMEKEKHSAERL-YTMDGIT 269
Query: 229 AVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHY 288
+ ++F AG +T++ T+ + + LMK P +K+ EI +IG ++ D QE+ Y
Sbjct: 270 VTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSR-IPAIKDRQEMPY 328
Query: 289 LKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEF 348
+ AVV E R VP +P E + + GY IP T V ++ D + + +PE+F
Sbjct: 329 MDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKF 388
Query: 349 YPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGIKS 408
PE F++ FK + PF G+R+C G + + L L +L F+ + + K
Sbjct: 389 KPEHFLNENGKFKYSDY-FKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKD 447
Query: 409 HDL 411
DL
Sbjct: 448 IDL 450
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 191/430 (44%), Gaps = 44/430 (10%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
+L G +V+ ++ KE L G +F R + + G + FS + W+E
Sbjct: 48 FTLYFGLERMVVLHGYEVVKEALIDLGEEFSGR-GHFPLAERANRGFGIVFS-NGKRWKE 105
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSR-MMEKISKSVAASNPVNVSEVMMSLTSTIICR 119
IR+ ++ L N K+ R E +R ++E++ K+ A+ P + + ++ +IC
Sbjct: 106 IRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKAS--PCDPTFILGCAPCNVICS 163
Query: 120 IGFGKRYDEDKATSGRSRFHTL---LNETLVSFFVP------------DYFPLIGWIDKL 164
I F KR+D +F L LNE + P DYFP G +KL
Sbjct: 164 IIFQKRFDYKD-----QQFLNLMEKLNENIRIVSTPWIQICNNFPTIIDYFP--GTHNKL 216
Query: 165 TGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLL--QIRKNCGFKVDL 222
+ +++ E + +QE MD + D ID L ++ + +
Sbjct: 217 LKNLAFMESDILEKVKEHQESMD-----------INNPRDFIDCFLIKMEKEKQNQQSEF 265
Query: 223 TLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDD 282
T++++ ++ AG +T++ T+ +A+ L+K+P KVQ EI ++G N+ +D
Sbjct: 266 TIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDR 325
Query: 283 VQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAW 342
+ Y AVV E R +P +P Y IP T + + ++ D + +
Sbjct: 326 -GHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEF 384
Query: 343 ENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEM 402
NPE F P F+D +FK ++ +PF AG+RIC G + + L L +L F+ +
Sbjct: 385 PNPEMFDPRHFLDEGGNFKKSNY-FMPFSAGKRICVGEGLARMELFLFLTFILQNFNLKS 443
Query: 403 PLGIKSHDLD 412
+ K DLD
Sbjct: 444 LIDPK--DLD 451
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 188/415 (45%), Gaps = 29/415 (6%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
SL LG ++V++ + KE L F RP K++ G L S Y W +
Sbjct: 51 FSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMG-GLLNSRYGRGWVD 109
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSRMMEKI-----SKSVAASNPVNVSEVMMSLTST 115
R++ V N + F ++ S+++E+ + P + +++ + S
Sbjct: 110 HRRLAV------NSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSN 163
Query: 116 IICRIGFGKRYDEDKATSGRSRFHTLLNETL-----VSFFVPDYFPLIGWIDKLTGMMQR 170
I I FG+R+ + + L +E + S F+ + FP IG + G Q+
Sbjct: 164 ITNLIIFGERFTYED--TDFQHMIELFSENVELAASASVFLYNAFPWIGILP--FGKHQQ 219
Query: 171 LQNSFQELDRFYQELMDEHLDPNRTKSELAQQ--EDIIDVLLQIRKNCGFKVDLTLDHIK 228
L + + F L+ E NR K +L Q + +D + Q + + + +++
Sbjct: 220 LFRNAAVVYDFLSRLI-EKASVNR-KPQLPQHFVDAYLDEMDQGKNDPS--STFSKENLI 275
Query: 229 AVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHY 288
+ + +AG +T+ + WA+ ++ P +VQ EI LI G G + DD ++ Y
Sbjct: 276 FSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEI-DLIMGPNGKPSWDDKCKMPY 334
Query: 289 LKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEF 348
+AV+ E +R VPL I T + V+ GY+IP T V N +++ D + W +PE F
Sbjct: 335 TEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVF 394
Query: 349 YPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 403
+PERF+DS F + L+PF GRR C G ++ + L LL +F P
Sbjct: 395 HPERFLDSSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFP 448
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 188/415 (45%), Gaps = 29/415 (6%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
SL LG ++V++ + KE L F RP K++ G L S Y W +
Sbjct: 51 FSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMG-GLLNSRYGRGWVD 109
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSRMMEKI-----SKSVAASNPVNVSEVMMSLTST 115
R++ V N + F ++ S+++E+ + P + +++ + S
Sbjct: 110 HRRLAV------NSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSN 163
Query: 116 IICRIGFGKRYDEDKATSGRSRFHTLLNETL-----VSFFVPDYFPLIGWIDKLTGMMQR 170
I I FG+R+ + + L +E + S F+ + FP IG + G Q+
Sbjct: 164 ITNLIIFGERFTYED--TDFQHMIELFSENVELAASASVFLYNAFPWIGILP--FGKHQQ 219
Query: 171 LQNSFQELDRFYQELMDEHLDPNRTKSELAQQ--EDIIDVLLQIRKNCGFKVDLTLDHIK 228
L + + F L+ E NR K +L Q + +D + Q + + + +++
Sbjct: 220 LFRNAAVVYDFLSRLI-EKASVNR-KPQLPQHFVDAYLDEMDQGKNDPS--STFSKENLI 275
Query: 229 AVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHY 288
+ + +AG +T+ + WA+ ++ P +VQ EI LI G G + DD ++ Y
Sbjct: 276 FSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEI-DLIMGPNGKPSWDDKCKMPY 334
Query: 289 LKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEF 348
+AV+ E +R VPL I T + V+ GY+IP T V N +++ D + W +PE F
Sbjct: 335 TEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVF 394
Query: 349 YPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 403
+PERF+DS F + L+PF GRR C G ++ + L LL +F P
Sbjct: 395 HPERFLDSSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFP 448
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 190/450 (42%), Gaps = 42/450 (9%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
++ LG +V+ KE L +F R L + G +AFS E ++
Sbjct: 47 FTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGRGEQATFDWL-FKGYGVAFS-NGERAKQ 104
Query: 61 IRKICVIHLFNSNRAKKFRPIRE---DEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
+R+ + L K R I E +E +++ + + A+ ++ + + S +I
Sbjct: 105 LRRFSIATLRGFGVGK--RGIEERIQEEAGFLIDALRGTHGAN--IDPTFFLSRTVSNVI 160
Query: 118 CRIGFGKRYD-EDKATSGRSRFHTLLNETLVSF-FVPD-----YFPLIGWIDKLTGMMQR 170
I FG R+D EDK F +LL L SF F Y + L G Q+
Sbjct: 161 SSIVFGDRFDYEDK------EFLSLLRMMLGSFQFTATSTGQLYEMFSSVMKHLPGPQQQ 214
Query: 171 LQNSFQELDRFYQELMDEH---LDPNRTKSELAQQEDIIDVLL----QIRKNCGFKVDLT 223
Q L+ F + ++ + LDPN + D ID L + KN +
Sbjct: 215 AFKELQGLEDFIAKKVEHNQRTLDPNSPR-------DFIDSFLIRMQEEEKNP--NTEFY 265
Query: 224 LDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDV 283
L ++ +N+F AG +T + T+ + LMK+P KV EI +IG N+ ED
Sbjct: 266 LKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA 325
Query: 284 QELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWE 343
+ + Y +AV+ E R +P+ + + + +P T VF ++ RDP +
Sbjct: 326 K-MPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFS 384
Query: 344 NPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 403
NP +F P+ F+D FK +PF G+R C G + + L ++ F ++ P
Sbjct: 385 NPRDFNPQHFLDKKGQFKKSD-AFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSP 443
Query: 404 LGIKSHDLDFDVLLGIAMHKKN-ALSLLPK 432
K D+ +G A +N +S LP+
Sbjct: 444 QSPKDIDVS-PKHVGFATIPRNYTMSFLPR 472
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 189/448 (42%), Gaps = 38/448 (8%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
++ LG +V+ +E L +F R A + G + FS E ++
Sbjct: 47 FTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR-GEQATFDWVFKGYGVVFS-NGERAKQ 104
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRI 120
+R+ + L + K+ R E + + + +N ++ + + S +I I
Sbjct: 105 LRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGAN-IDPTFFLSRTVSNVISSI 163
Query: 121 GFGKRYD-EDKATSGRSRFHTLLNETLVSFFVPD------YFPLIGWIDKLTGMMQRLQN 173
FG R+D +DK F +LL L SF Y + L G Q+
Sbjct: 164 VFGDRFDYKDK------EFLSLLRMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQ 217
Query: 174 SFQELDRFYQELMDEH---LDPNRTKSELAQQEDIIDVLL----QIRKNCGFKVDLTLDH 226
Q L+ F + ++ + LDPN + D ID L + KN + L +
Sbjct: 218 LLQGLEDFIAKKVEHNQRTLDPNSPR-------DFIDSFLIRMQEEEKNP--NTEFYLKN 268
Query: 227 IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQEL 286
+ +N+F AG +T + T+ + LMK+P KV EI +IG N+ ED + +
Sbjct: 269 LVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-M 327
Query: 287 HYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPE 346
Y++AV+ E R +P+ + R + + +P T V+ ++ RDP + NP+
Sbjct: 328 PYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQ 387
Query: 347 EFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGI 406
+F P+ F++ FK +PF G+R C G G+A ++L L ++ +
Sbjct: 388 DFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFG--EGLARMELFLFFTTVMQNFRLKSSQ 444
Query: 407 KSHDLDFDV-LLGIAMHKKN-ALSLLPK 432
D+D +G A +N +S LP+
Sbjct: 445 SPKDIDVSPKHVGFATIPRNYTMSFLPR 472
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 102/178 (57%), Gaps = 4/178 (2%)
Query: 222 LTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNED 281
L+ + A + + +A +T+A +++W + L +NP+A +++ E++S++ N+ +
Sbjct: 279 LSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQT-PRAE 337
Query: 282 DVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEA 341
D++ + YLKA +KE+MRL P+VP R + V+ YA+P T + +N +G +
Sbjct: 338 DLRNMPYLKACLKESMRLTPSVPFTT-RTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDN 396
Query: 342 WENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 399
+E+ +F PER++ + K F +PFG G+R+C G + + LAL ++ K+D
Sbjct: 397 FEDSHKFRPERWLQK--EKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYD 452
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 115/230 (50%), Gaps = 9/230 (3%)
Query: 174 SFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFK--VDLTLDHIKAVL 231
SF+ DR ++E+ D + + Q ++ ID +LQ + +K LT D + +L
Sbjct: 201 SFRRRDRAHREIKDIFY---KAIQKRRQSQEKIDDILQTLLDATYKDGRPLTDDEVAGML 257
Query: 232 MNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKA 291
+ + +AG TS+ T W +L ++ KK LE +++ G N + D +++L+ L
Sbjct: 258 IGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDR 317
Query: 292 VVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPE 351
+KET+RL+P + +++ R + GY IP +V V+ R ++W +F P+
Sbjct: 318 CIKETLRLRPPI-MIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPD 376
Query: 352 RFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANL--LYKFD 399
R++ G+ F +PFGAGR C G N + + + LY+FD
Sbjct: 377 RYLQDN-PASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFD 425
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 161/350 (46%), Gaps = 11/350 (3%)
Query: 56 EYWREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTST 115
E W+ +R + + F S + K+ PI ++ + + PV + +V + +
Sbjct: 104 EEWKRLRSL-LSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMD 162
Query: 116 IICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSF 175
+I FG + D + + F + L F+ +F I L +++ L
Sbjct: 163 VITSTSFG--VNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICV 220
Query: 176 --QELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMN 233
+E+ F ++ + + + +R + + D + +++ + + + L ++ V +
Sbjct: 221 FPREVTNFLRKSV-KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQS 279
Query: 234 VFV--AGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKA 291
+ AG +T+++ + + M L +P +K+Q EI +++ NK D V ++ YL
Sbjct: 280 IIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP-NKAPPTYDTVLQMEYLDM 338
Query: 292 VVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPE 351
VV ET+RL P + + + R + I+G IP V + ++A+ RDP+ W PE+F PE
Sbjct: 339 VVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPE 397
Query: 352 RFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 401
RF D + PFG+G R C G+ + + LAL +L F ++
Sbjct: 398 RFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 446
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 161/350 (46%), Gaps = 11/350 (3%)
Query: 56 EYWREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTST 115
E W+ +R + + F S + K+ PI ++ + + PV + +V + +
Sbjct: 102 EEWKRLRSL-LSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMD 160
Query: 116 IICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSF 175
+I FG + D + + F + L F+ +F I L +++ L
Sbjct: 161 VITSTSFG--VNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICV 218
Query: 176 --QELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMN 233
+E+ F ++ + + + +R + + D + +++ + + + L ++ V +
Sbjct: 219 FPREVTNFLRKSV-KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQS 277
Query: 234 VFV--AGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKA 291
+ AG +T+++ + + M L +P +K+Q EI +++ NK D V ++ YL
Sbjct: 278 IIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP-NKAPPTYDTVLQMEYLDM 336
Query: 292 VVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPE 351
VV ET+RL P + + + R + I+G IP V + ++A+ RDP+ W PE+F PE
Sbjct: 337 VVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPE 395
Query: 352 RFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 401
RF D + PFG+G R C G+ + + LAL +L F ++
Sbjct: 396 RFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 444
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 161/350 (46%), Gaps = 11/350 (3%)
Query: 56 EYWREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTST 115
E W+ +R + + F S + K+ PI ++ + + PV + +V + +
Sbjct: 103 EEWKRLRSL-LSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMD 161
Query: 116 IICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSF 175
+I FG + D + + F + L F+ +F I L +++ L
Sbjct: 162 VITSTSFG--VNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICV 219
Query: 176 --QELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMN 233
+E+ F ++ + + + +R + + D + +++ + + + L ++ V +
Sbjct: 220 FPREVTNFLRKSV-KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQS 278
Query: 234 VFV--AGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKA 291
+ AG +T+++ + + M L +P +K+Q EI +++ NK D V ++ YL
Sbjct: 279 IIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP-NKAPPTYDTVLQMEYLDM 337
Query: 292 VVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPE 351
VV ET+RL P + + + R + I+G IP V + ++A+ RDP+ W PE+F PE
Sbjct: 338 VVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPE 396
Query: 352 RFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWE 401
RF D + PFG+G R C G+ + + LAL +L F ++
Sbjct: 397 RFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 445
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 126/253 (49%), Gaps = 22/253 (8%)
Query: 169 QRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIK 228
+R ++ +L E++ E ++ + +D++ LL+ + + G + H +
Sbjct: 214 RRFNDALADLHLLVDEIIAER------RASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQ 267
Query: 229 AVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHY 288
V + G++T A+T++W + L +P +++ E+ ++ GG V +DV++L +
Sbjct: 268 VV--AILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRP--VAFEDVRKLRH 323
Query: 289 LKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEF 348
V+ E MRL+P V +L R + + + GY IPA + + +AI RDP+++++ EF
Sbjct: 324 TGNVIVEAMRLRPAVWVLT-RRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEF 382
Query: 349 YPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLG--- 405
P+R++ + + PF AG+R CP + +A + L A L K+ +E G
Sbjct: 383 DPDRWLPERA-ANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSND 441
Query: 406 -------IKSHDL 411
++ HDL
Sbjct: 442 AVRVGITLRPHDL 454
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 188/448 (41%), Gaps = 38/448 (8%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
++ LG +V+ +E L +F R A + G + FS E ++
Sbjct: 47 FTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR-GEQATFDWVFKGYGVVFS-NGERAKQ 104
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRI 120
+R+ + L + K+ R E + + + +N ++ + + S +I I
Sbjct: 105 LRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGAN-IDPTFFLSRTVSNVISSI 163
Query: 121 GFGKRYD-EDKATSGRSRFHTLLNETLVSFFVPD------YFPLIGWIDKLTGMMQRLQN 173
FG R+D +DK F +LL L F Y + L G Q+
Sbjct: 164 VFGDRFDYKDK------EFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQ 217
Query: 174 SFQELDRFYQELMDEH---LDPNRTKSELAQQEDIIDVLL----QIRKNCGFKVDLTLDH 226
Q L+ F + ++ + LDPN + D ID L + KN + L +
Sbjct: 218 LLQGLEDFIAKKVEHNQRTLDPNSPR-------DFIDSFLIRMQEEEKNP--NTEFYLKN 268
Query: 227 IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQEL 286
+ +N+F+ G +T + T+ + LMK+P KV EI +IG N+ ED + +
Sbjct: 269 LVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-M 327
Query: 287 HYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPE 346
Y++AV+ E R +P+ + R + + +P T V+ ++ RDP + NP+
Sbjct: 328 PYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQ 387
Query: 347 EFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGI 406
+F P+ F++ FK +PF G+R C G G+A ++L L ++ +
Sbjct: 388 DFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFG--EGLARMELFLFFTTVMQNFRLKSSQ 444
Query: 407 KSHDLDFDV-LLGIAMHKKN-ALSLLPK 432
D+D +G A +N +S LP+
Sbjct: 445 SPKDIDVSPKHVGFATIPRNYTMSFLPR 472
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 187/448 (41%), Gaps = 38/448 (8%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
++ LG +V+ +E L +F R A + G + FS E ++
Sbjct: 47 FTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR-GEQATFDWVFKGYGVVFS-NGERAKQ 104
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRI 120
+R+ + L + K+ R E + + + +N ++ + + S +I I
Sbjct: 105 LRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGAN-IDPTFFLSRTVSNVISSI 163
Query: 121 GFGKRYD-EDKATSGRSRFHTLLNETLVSFFVPD------YFPLIGWIDKLTGMMQRLQN 173
FG R+D +DK F +LL L F Y + L G Q+
Sbjct: 164 VFGDRFDYKDK------EFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQ 217
Query: 174 SFQELDRFYQELMDEH---LDPNRTKSELAQQEDIIDVLL----QIRKNCGFKVDLTLDH 226
Q L+ F + ++ + LDPN + D ID L + KN + L +
Sbjct: 218 CLQGLEDFIAKKVEHNQRTLDPNSPR-------DFIDSFLIRMQEEEKNP--NTEFYLKN 268
Query: 227 IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQEL 286
+ + +F+ G +T + T+ + LMK+P KV EI +IG N+ ED + +
Sbjct: 269 LVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-M 327
Query: 287 HYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPE 346
Y++AV+ E R +P+ + R + + +P T V+ ++ RDP + NP+
Sbjct: 328 PYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQ 387
Query: 347 EFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGI 406
+F P+ F++ FK +PF G+R C G G+A ++L L ++ +
Sbjct: 388 DFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFG--EGLARMELFLFFTTVMQNFRLKSSQ 444
Query: 407 KSHDLDFDV-LLGIAMHKKN-ALSLLPK 432
D+D +G A +N +S LP+
Sbjct: 445 SPKDIDVSPKHVGFATIPRNYTMSFLPR 472
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 187/448 (41%), Gaps = 38/448 (8%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
++ LG +V+ +E L +F R A + G + FS E ++
Sbjct: 47 FTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR-GEQATFDWVFKGYGVVFS-NGERAKQ 104
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRI 120
+R+ + L + K+ R E + + + +N ++ + + S +I I
Sbjct: 105 LRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGAN-IDPTFFLSRTVSNVISSI 163
Query: 121 GFGKRYD-EDKATSGRSRFHTLLNETLVSFFVPD------YFPLIGWIDKLTGMMQRLQN 173
FG R+D +DK F +LL L F Y + L G Q+
Sbjct: 164 VFGDRFDYKDK------EFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQ 217
Query: 174 SFQELDRFYQELMDEH---LDPNRTKSELAQQEDIIDVLL----QIRKNCGFKVDLTLDH 226
Q L+ F + ++ + LDPN + D ID L + KN + L +
Sbjct: 218 LLQGLEDFIAKKVEHNQRTLDPNSPR-------DFIDSFLIRMQEEEKNP--NTEFYLKN 268
Query: 227 IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQEL 286
+ + +FV G +T + T+ + LMK+P KV EI +IG N+ ED + +
Sbjct: 269 LVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-M 327
Query: 287 HYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPE 346
Y++AV+ E R +P+ + R + + +P T V+ ++ RDP + NP+
Sbjct: 328 PYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQ 387
Query: 347 EFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGI 406
+F P+ F++ FK +PF G+R C G G+A ++L L ++ +
Sbjct: 388 DFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFG--EGLARMELFLFFTTVMQNFRLKSSQ 444
Query: 407 KSHDLDFDV-LLGIAMHKKN-ALSLLPK 432
D+D +G A +N +S LP+
Sbjct: 445 SPKDIDVSPKHVGFATIPRNYTMSFLPR 472
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 187/448 (41%), Gaps = 38/448 (8%)
Query: 1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWRE 60
++ LG +V+ +E L +F R A + G + FS E ++
Sbjct: 47 FTIHLGPRRVVVLCGHDAVREALVDQAEEFSGR-GEQATFDWVFKGYGVVFS-NGERAKQ 104
Query: 61 IRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRI 120
+R+ + L + K+ R E + + + +N ++ + + S +I I
Sbjct: 105 LRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGAN-IDPTFFLSRTVSNVISSI 163
Query: 121 GFGKRYD-EDKATSGRSRFHTLLNETLVSFFVPD------YFPLIGWIDKLTGMMQRLQN 173
FG R+D +DK F +LL L F Y + L G Q+
Sbjct: 164 VFGDRFDYKDK------EFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQ 217
Query: 174 SFQELDRFYQELMDEH---LDPNRTKSELAQQEDIIDVLL----QIRKNCGFKVDLTLDH 226
Q L+ F + ++ + LDPN + D ID L + KN + L +
Sbjct: 218 LLQGLEDFIAKKVEHNQRTLDPNSPR-------DFIDSFLIRMQEEEKNP--NTEFYLKN 268
Query: 227 IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQEL 286
+ + +F+ G +T + T+ + LMK+P KV EI +IG N+ ED + +
Sbjct: 269 LVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-M 327
Query: 287 HYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPE 346
Y++AV+ E R +P+ + R + + +P T V+ ++ RDP + NP+
Sbjct: 328 PYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQ 387
Query: 347 EFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGI 406
+F P+ F++ FK +PF G+R C G G+A ++L L ++ +
Sbjct: 388 DFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFG--EGLARMELFLFFTTVMQNFRLKSSQ 444
Query: 407 KSHDLDFDV-LLGIAMHKKN-ALSLLPK 432
D+D +G A +N +S LP+
Sbjct: 445 SPKDIDVSPKHVGFATIPRNYTMSFLPR 472
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 165/378 (43%), Gaps = 38/378 (10%)
Query: 58 WREIRKICVIHLFNSNRAKKF----RPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLT 113
W++ R + + K F P+ +D VS + ++I + + ++ E +
Sbjct: 109 WKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHFA 168
Query: 114 STIICRIGFGKRYD--EDKATSGRSRF----HTLLNETLVSFFVPD----YFPLIGWIDK 163
I + FG+R E+ +F + + + ++ VP F W D
Sbjct: 169 FESITNVMFGERLGMLEETVNPEAQKFIDAVYKMFHTSVPLLNVPPELYRLFRTKTWRDH 228
Query: 164 LTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLT 223
+ + + + FYQ+L R K+E I+ LL+ K +
Sbjct: 229 VAAWDTIFNKAEKYTEIFYQDL--------RRKTEFRNYPGILYCLLKSEK-------ML 273
Query: 224 LDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDV 283
L+ +KA + + G +T++ T+ W + + ++ + ++ E+ + +G +++ +
Sbjct: 274 LEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKM-L 332
Query: 284 QELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWE 343
Q + LKA +KET+RL P + + + R V+ Y IPAKT V V +A+GRDP +
Sbjct: 333 QMVPLLKASIKETLRLHP-ISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFS 391
Query: 344 NPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMP 403
+P++F P R++ D HF + FG G R C G + + L L ++L F EM
Sbjct: 392 SPDKFDPTRWLSKDKDLI--HFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEM- 448
Query: 404 LGIKSHDLDFDVLLGIAM 421
H D D + + +
Sbjct: 449 ----QHIGDVDTIFNLIL 462
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 152/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 97 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 154
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 155 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 188
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 189 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 246
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 247 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 306
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 307 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 363
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R CPG + L L +L
Sbjct: 364 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACPGQQFALHEATLVLGMML 419
Query: 396 YKFDWE 401
FD+E
Sbjct: 420 KHFDFE 425
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 121/247 (48%), Gaps = 19/247 (7%)
Query: 152 PDYFPLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQ 211
PD F I W+ K + + S ++L + L+ E T+ +L + D L+
Sbjct: 231 PDIFFKISWLYK------KYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELIL 284
Query: 212 IRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLI 271
K + DLT +++ ++ + +A DT + ++ + + + K+P + + EI+++I
Sbjct: 285 AEK----RGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVI 340
Query: 272 GGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVN 331
G + DD+Q+L ++ + E+MR QP V L++ R+ ++ VIDGY + T + +N
Sbjct: 341 GERD--IKIDDIQKLKVMENFIYESMRYQPVVDLVM-RKALEDDVIDGYPVKKGTNIILN 397
Query: 332 AWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLAL 391
+ R E + P EF E F + ++F+ PFG G R C G + + + L
Sbjct: 398 IGRMHR-LEFFPKPNEFTLENFAK---NVPYRYFQ--PFGFGPRGCAGKYIAMVMMKAIL 451
Query: 392 ANLLYKF 398
LL +F
Sbjct: 452 VTLLRRF 458
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 158/357 (44%), Gaps = 28/357 (7%)
Query: 55 YEYWREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTS 114
YE W + R++ + S+ E + +++E + PV++ +++
Sbjct: 83 YERWHKQRRVIDLAFSRSSLVSLMETFNE-KAEQLVEILEAKADGQTPVSMQDMLTYTAM 141
Query: 115 TIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNS 174
I+ + FG E G + + + ++ L ++ ++ ++ S
Sbjct: 142 DILAKAAFGM---ETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLPGKRKQLREVRES 198
Query: 175 FQELDRFYQELMDEHLDPNRTKSELAQQEDI-IDVLLQIRK-NCGFKVDLTLDHIKAVLM 232
RF +++ + + R + L + E++ D+L QI K G + D + + +
Sbjct: 199 I----RFLRQVGRDWV--QRRREALKRGEEVPADILTQILKAEEGAQDD---EGLLDNFV 249
Query: 233 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAV 292
F+AG +TSA + + + L + P + ++Q E+ +IG +K +++ +D+ L YL V
Sbjct: 250 TFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIG-SKRYLDFEDLGRLQYLSQV 308
Query: 293 VKETMRLQP----TVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEF 348
+KE++RL P T LL ++ +IDG +P T + + + +GR +E+P F
Sbjct: 309 LKESLRLYPPAWGTFRLLE-----EETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTF 363
Query: 349 YPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLG 405
P+RF F PF G R C G V + +A LL + ++ + G
Sbjct: 364 NPDRFGPGA---PKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPG 417
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 142/321 (44%), Gaps = 20/321 (6%)
Query: 83 EDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLL 142
ED+V RM+ ++ +++ + LT GK++ + +H L
Sbjct: 118 EDQVRRMIADWGEA----GEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELE 173
Query: 143 NETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHL-DPNRTKSELAQ 201
T +V Y P+ + +R + L ++M+ + +P KS+
Sbjct: 174 RGTDPLAYVDPYLPIESF--------RRRDEARNGLVALVADIMNGRIANPPTDKSD--- 222
Query: 202 QEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMK 261
D++DVL+ ++ G + D I + +++ AG TS+ T W + LM++ A
Sbjct: 223 -RDMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYA 280
Query: 262 KVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYA 321
V E+ L G + V+ ++++ L+ V+KET+RL P + +L+ R + + G+
Sbjct: 281 AVIDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHR 338
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN 381
I V + R PE + +P +F P R+ + + IPFGAGR C G
Sbjct: 339 IHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAA 398
Query: 382 MGIATVDLALANLLYKFDWEM 402
I + + LL ++++EM
Sbjct: 399 FAIMQIKAIFSVLLREYEFEM 419
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 142/321 (44%), Gaps = 20/321 (6%)
Query: 83 EDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLL 142
ED+V RM+ ++ +++ + LT GK++ + +H L
Sbjct: 118 EDQVRRMIADWGEA----GEIDLLDFFAELTIYTSSATLIGKKFRDQLDGRFAKLYHELE 173
Query: 143 NETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHL-DPNRTKSELAQ 201
T +V Y P+ + +R + L ++M+ + +P KS+
Sbjct: 174 RGTDPLAYVDPYLPIESF--------RRRDEARNGLVALVADIMNGRIANPPTDKSD--- 222
Query: 202 QEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMK 261
D++DVL+ ++ G + D I + +++ AG TS+ T W + LM++ A
Sbjct: 223 -RDMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYA 280
Query: 262 KVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYA 321
V E+ L G + V+ ++++ L+ V+KET+RL P + +L+ R + + G+
Sbjct: 281 AVIDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHR 338
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN 381
I V + R PE + +P +F P R+ + + IPFGAGR C G
Sbjct: 339 IHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAA 398
Query: 382 MGIATVDLALANLLYKFDWEM 402
I + + LL ++++EM
Sbjct: 399 FAIMQIKAIFSVLLREYEFEM 419
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 152/381 (39%), Gaps = 63/381 (16%)
Query: 48 DLAFSPYYEYWREIRKICVIH-----LFNSNRAKKFRPIREDEVSRMMEKISKSVAASNP 102
D A + W + C H F+ K + + D ++++K + + A
Sbjct: 81 DFAGDGLFTSWTHEKNWCKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEH 139
Query: 103 VNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWID 162
+ V E M LT I GF R++ SF+ P I
Sbjct: 140 IEVPEDMTRLTLDTIGLSGFNYRFN--------------------SFYRDQPHPFI---- 175
Query: 163 KLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKV 220
T M++ L + +L R + D D N+ + ++ D++D ++ RK G +
Sbjct: 176 --TSMVRALDEAMNKLQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQS 231
Query: 221 DLTLDH-----------------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKV 263
D L H I+ ++ +AG +T++ + +A+ +L+KNP ++K
Sbjct: 232 DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA 291
Query: 264 QLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAI 322
E R L+ + V++L Y+ V+ E +RL PT P + Y +
Sbjct: 292 AEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPL 348
Query: 323 PAKTRVFVNAWAIGRDPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGL 380
+ V + RD W ++ EEF PERF + S I QH PFG G+R C G
Sbjct: 349 EKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQ 404
Query: 381 NMGIATVDLALANLLYKFDWE 401
+ L L +L FD+E
Sbjct: 405 QFALHEATLVLGMMLKHFDFE 425
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 142/321 (44%), Gaps = 20/321 (6%)
Query: 83 EDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLL 142
ED+V RM+ ++ +++ + LT GK++ + +H L
Sbjct: 118 EDQVRRMIADWGEA----GEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELE 173
Query: 143 NETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHL-DPNRTKSELAQ 201
T +V Y P+ + +R + L ++M+ + +P KS+
Sbjct: 174 RGTDPLAYVDPYLPIESF--------RRRDEARNGLVALVADIMNGRIANPPTDKSD--- 222
Query: 202 QEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMK 261
D++DVL+ ++ G + D I + +++ AG TS+ T W + LM++ A
Sbjct: 223 -RDMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYA 280
Query: 262 KVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYA 321
V E+ L G + V+ ++++ L+ V+KET+RL P + +L+ R + + G+
Sbjct: 281 AVIDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHR 338
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN 381
I V + R PE + +P +F P R+ + + IPFGAGR C G
Sbjct: 339 IHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAA 398
Query: 382 MGIATVDLALANLLYKFDWEM 402
I + + LL ++++EM
Sbjct: 399 FAIMQIKAIFSVLLREYEFEM 419
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 142/321 (44%), Gaps = 20/321 (6%)
Query: 83 EDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLL 142
ED+V RM+ ++ +++ + LT GK++ + +H L
Sbjct: 118 EDQVRRMIADWGEA----GEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELE 173
Query: 143 NETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHL-DPNRTKSELAQ 201
T +V Y P+ + +R + L ++M+ + +P KS+
Sbjct: 174 RGTDPLAYVDPYLPIESF--------RRRDEARNGLVALVADIMNGRIANPPTDKSD--- 222
Query: 202 QEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMK 261
D++DVL+ ++ G + D I + +++ AG TS+ T W + LM++ A
Sbjct: 223 -RDMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYA 280
Query: 262 KVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYA 321
V E+ L G + V+ ++++ L+ V+KET+RL P + +L+ R + + G+
Sbjct: 281 AVIDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHR 338
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN 381
I V + R PE + +P +F P R+ + + IPFGAGR C G
Sbjct: 339 IHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAA 398
Query: 382 MGIATVDLALANLLYKFDWEM 402
I + + LL ++++EM
Sbjct: 399 FAIMQIKAIFSVLLREYEFEM 419
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 152/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 99 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 156
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 157 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 190
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 191 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 248
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 249 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 308
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PTVP + Y + + V + R
Sbjct: 309 ---KQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 365
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 366 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 421
Query: 396 YKFDWE 401
FD+E
Sbjct: 422 KHFDFE 427
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACEGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 158/382 (41%), Gaps = 60/382 (15%)
Query: 43 SYNGLDLAFSPYYEY-WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASN 101
+ G LA S +E W++ I ++ F+ K + + D ++++K + + A
Sbjct: 80 DFAGDGLATSWTHEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADE 137
Query: 102 PVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWI 161
+ V E M LT I GF R++ SF+ P I
Sbjct: 138 HIEVPEDMTRLTLDTIGLCGFNYRFN--------------------SFYRDQPHPFI--- 174
Query: 162 DKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFK 219
T M++ L + +L R + D D N+ + ++ D++D ++ RK G +
Sbjct: 175 ---TSMVRALDEAMNKLQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQ 229
Query: 220 VDLTLDH-----------------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKK 262
D L H I+ ++ +AG +T++ + +A+ +L+KNP ++K
Sbjct: 230 SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK 289
Query: 263 VQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYA 321
E R L+ + V++L Y+ V+ E +RL PT P + Y
Sbjct: 290 AAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYP 346
Query: 322 IPAKTRVFVNAWAIGRDPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPG 379
+ + V + RD W ++ EEF PERF + S I QH PFG G+R C G
Sbjct: 347 LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIG 402
Query: 380 LNMGIATVDLALANLLYKFDWE 401
+ L L +L FD+E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 154/365 (42%), Gaps = 44/365 (12%)
Query: 58 WREIRKICVIHLFNSNRAKKFRP----IREDEVSRMMEKISKSVAASNPVNVSEVMMSLT 113
W++ R + K F P + D VS + +I K+ + + ++S+ +
Sbjct: 107 WKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFA 166
Query: 114 STIICRIGFGKRYD--EDKATSGRSRF--------HT---LLNETLVSFFVPDYFPLI-- 158
I + FG+R E+ RF HT +LN PD F L
Sbjct: 167 FESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLN------LPPDLFRLFRT 220
Query: 159 -GWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCG 217
W D + + FY EL R K + D +L ++ +
Sbjct: 221 KTWKDHVAAWDVIFSKADIYTQNFYWEL--------RQKGSV--HHDYRGILYRLLGDS- 269
Query: 218 FKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGF 277
++ + IKA + + G DT++ T+ W + + +N + ++ E+ + +G
Sbjct: 270 ---KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGD 326
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
+ +Q + LKA +KET+RL P + + + R + V+ Y IPAKT V V +A+GR
Sbjct: 327 M-ATMLQLVPLLKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGR 384
Query: 338 DPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYK 397
+P + +PE F P R++ D +F + FG G R C G + + + L N+L
Sbjct: 385 EPTFFFDPENFDPTRWLSK--DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLEN 442
Query: 398 FDWEM 402
F E+
Sbjct: 443 FRVEI 447
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 154/365 (42%), Gaps = 44/365 (12%)
Query: 58 WREIRKICVIHLFNSNRAKKFRP----IREDEVSRMMEKISKSVAASNPVNVSEVMMSLT 113
W++ R + K F P + D VS + +I K+ + + ++S+ +
Sbjct: 104 WKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFA 163
Query: 114 STIICRIGFGKRYD--EDKATSGRSRF--------HT---LLNETLVSFFVPDYFPLI-- 158
I + FG+R E+ RF HT +LN PD F L
Sbjct: 164 FESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLN------LPPDLFRLFRT 217
Query: 159 -GWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCG 217
W D + + FY EL R K + D +L ++ +
Sbjct: 218 KTWKDHVAAWDVIFSKADIYTQNFYWEL--------RQKGSV--HHDYRGILYRLLGDS- 266
Query: 218 FKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGF 277
++ + IKA + + G DT++ T+ W + + +N + ++ E+ + +G
Sbjct: 267 ---KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGD 323
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
+ +Q + LKA +KET+RL P + + + R + V+ Y IPAKT V V +A+GR
Sbjct: 324 M-ATMLQLVPLLKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGR 381
Query: 338 DPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYK 397
+P + +PE F P R++ D +F + FG G R C G + + + L N+L
Sbjct: 382 EPTFFFDPENFDPTRWLSK--DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLEN 439
Query: 398 FDWEM 402
F E+
Sbjct: 440 FRVEI 444
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 99 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 156
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 157 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 190
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 191 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 248
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 249 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 308
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 309 ---KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 365
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 366 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 421
Query: 396 YKFDWE 401
FD+E
Sbjct: 422 KHFDFE 427
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 97 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 154
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 155 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 188
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 189 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 246
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 247 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 306
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 307 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 363
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 364 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 396 YKFDWE 401
FD+E
Sbjct: 420 KHFDFE 425
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 ---KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGKQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 99 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 156
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 157 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 190
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 191 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 248
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 249 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 308
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 309 ---KQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 365
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 366 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 421
Query: 396 YKFDWE 401
FD+E
Sbjct: 422 KHFDFE 427
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 97 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 154
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 155 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 188
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 189 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 246
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 247 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 306
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 307 ---KQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 363
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 364 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 396 YKFDWE 401
FD+E
Sbjct: 420 KHFDFE 425
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 218 FKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGF 277
K +L+L+ IKA M + DT+A ++ + L +NP VQ +R
Sbjct: 269 LKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNP----DVQQILRQESLAAAAS 324
Query: 278 VNEDD---VQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWA 334
++E EL L+A +KET+RL P V L + R V+ Y IPA T V V ++
Sbjct: 325 ISEHPQKATTELPLLRAALKETLRLYP-VGLFLERVVSSDLVLQNYHIPAGTLVQVFLYS 383
Query: 335 IGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPG 379
+GR+ + PE + P+R++D I G++F +PFG G R C G
Sbjct: 384 LGRNAALFPRPERYNPQRWLD--IRGSGRNFHHVPFGFGMRQCLG 426
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ +AG ++++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 102 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 159
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 160 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 193
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 194 LQRTNPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPET 251
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ +AG +T++ + + + +L+KNP ++K E R L+ +
Sbjct: 252 GEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVDPVPSY 311
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 312 ---KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHR 368
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 369 DKTIWGDDVEEFRPERFENPSAIP---QH-AFKPFGNGQRACIGQQFALHEATLVLGMML 424
Query: 396 YKFDWE 401
FD+E
Sbjct: 425 KHFDFE 430
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 157/362 (43%), Gaps = 51/362 (14%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEYIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFP-LIGWIDKLTGMMQRLQNS-- 174
GF R++ SF+ P +I I L +M +LQ +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFIISMIRALDEVMNKLQRANP 193
Query: 175 ----FQELDRFYQE---LMDEHLD---PNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTL 224
+ E R +QE +M++ +D +R S +Q D D+L Q+ + L
Sbjct: 194 DDPAYDENKRQFQEDIKVMNDLVDKIIADRKAS--GEQSD--DLLTQMLNGKDPETGEPL 249
Query: 225 D--HIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGFVNED 281
D +I ++ +AG +T++ + +A+ +L+KNP ++KV E R L+ +
Sbjct: 250 DDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVPSYKQ-- 307
Query: 282 DVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEA 341
V++L Y+ V+ E +RL PT P + Y + V V + RD
Sbjct: 308 -VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTI 366
Query: 342 W-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 399
W ++ EEF PERF + S I QH PFG G+R C G + L L +L FD
Sbjct: 367 WGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
Query: 400 WE 401
+E
Sbjct: 423 FE 424
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH P+G G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPYGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 97 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 154
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 155 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 188
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 189 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 246
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ +AG ++++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 247 GEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 306
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 307 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 363
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 364 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 396 YKFDWE 401
FD+E
Sbjct: 420 KHFDFE 425
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ +AG ++++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 157/382 (41%), Gaps = 60/382 (15%)
Query: 43 SYNGLDLAFSPYYEY-WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASN 101
+ G LA S +E W++ I ++ F+ K + + D ++++K + + A
Sbjct: 80 DFAGDGLATSWTHEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADE 137
Query: 102 PVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWI 161
+ V E M LT I GF R++ SF+ P I
Sbjct: 138 HIEVPEDMTRLTLDTIGLCGFNYRFN--------------------SFYRDQPHPFI--- 174
Query: 162 DKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFK 219
T M++ L + +L R + D D N+ + ++ D++D ++ RK G +
Sbjct: 175 ---TSMVRALDEAMNKLQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQ 229
Query: 220 VDLTLDH-----------------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKK 262
D L H I+ ++ +AG + ++ + +A+ +L+KNP ++K
Sbjct: 230 SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQK 289
Query: 263 VQLEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYA 321
E R L+ + V++L Y+ V+ E +RL PT P + Y
Sbjct: 290 AAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYP 346
Query: 322 IPAKTRVFVNAWAIGRDPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPG 379
+ + V + RD W ++ EEF PERF + S I QH PFG G+R C G
Sbjct: 347 LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIG 402
Query: 380 LNMGIATVDLALANLLYKFDWE 401
+ L L +L FD+E
Sbjct: 403 QQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ +AG + ++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ + G +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ +AG + ++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 151/366 (41%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH P+G G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPWGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ +AG + ++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ + G +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ + G +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ + G +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ + G +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ + G +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH P G G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPHGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 156/382 (40%), Gaps = 60/382 (15%)
Query: 43 SYNGLDLAFSPYYEY-WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASN 101
+ G LA S +E W++ R I + L + K + + D ++++K + + +
Sbjct: 81 DFAGDGLATSWTHEKNWKKARNILLPRL-SQQAMKGYHAMMVDIAVQLVQKWER-LNSDE 138
Query: 102 PVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWI 161
+ V E M LT I GF R + SF+ P I
Sbjct: 139 HIEVPEDMTRLTLDTIGLCGFNYRIN--------------------SFYRDQPHPFI--- 175
Query: 162 DKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFK 219
T M++ L +L R + D D N+ + ++ D++D ++ RK G +
Sbjct: 176 ---TSMVRALDEVMNKLQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQ 230
Query: 220 VDLTLDH-----------------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKK 262
D L H I+ ++ +AG +T++ + +A+ +L+KNP ++K
Sbjct: 231 SDDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQK 290
Query: 263 VQLE-IRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYA 321
E R L+ + V++L Y+ V+ E +R+ PT P + Y
Sbjct: 291 AAEEAARVLVDPVPSYKQ---VKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYP 347
Query: 322 IPAKTRVFVNAWAIGRDPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPG 379
+ + V + RD W ++ EEF PERF + S I QH PFG G+R C G
Sbjct: 348 LEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIG 403
Query: 380 LNMGIATVDLALANLLYKFDWE 401
+ L L +L FD+E
Sbjct: 404 QQFALHEATLVLGMMLKHFDFE 425
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLE-IRSLIGGNKGF 277
I+ ++ +AG +T++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH P G G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPAGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 159/382 (41%), Gaps = 60/382 (15%)
Query: 42 LSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASN 101
L+ +GL +++ + + W++ I ++ F+ K + + D ++++K + + A
Sbjct: 82 LAGDGLFTSWT-HEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADE 138
Query: 102 PVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWI 161
+ V E M LT I GF R++ SF+ P I
Sbjct: 139 HIEVPEDMTRLTLDTIGLCGFNYRFN--------------------SFYRDQPHPFI--- 175
Query: 162 DKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFK 219
T M++ L + +L R + D D N+ + ++ D++D ++ RK G +
Sbjct: 176 ---TSMVRALDEAMNKLRRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQ 230
Query: 220 VDLTLDH-----------------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKK 262
D L H I+ ++ AG + ++ + +A+ +L+KNP ++K
Sbjct: 231 SDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQK 290
Query: 263 VQLEI-RSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYA 321
E R L+ + V++L Y+ V+ E +RL PT P + Y
Sbjct: 291 AAEEAARVLV---DPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYP 347
Query: 322 IPAKTRVFVNAWAIGRDPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPG 379
+ + V + RD W ++ EEF PERF + S I QH PFG G+R C G
Sbjct: 348 LEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIG 403
Query: 380 LNMGIATVDLALANLLYKFDWE 401
+ L L +L FD+E
Sbjct: 404 QQFALHEATLVLGMMLKHFDFE 425
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 149/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LRRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ AG + ++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAI---PQH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 149/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 97 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 154
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 155 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 188
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 189 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 246
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ AG + ++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 247 GEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 306
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 307 KQ---VKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 363
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 364 DKTIWGDDVEEFRPERFENPSAIP---QH-AFKPFGNGQRACIGQQFALHEATLVLGMML 419
Query: 396 YKFDWE 401
FD+E
Sbjct: 420 KHFDFE 425
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 149/366 (40%), Gaps = 59/366 (16%)
Query: 58 WREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTII 117
W++ I ++ F+ K + + D ++++K + + A + V E M LT I
Sbjct: 96 WKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWER-LNADEHIEVPEDMTRLTLDTI 153
Query: 118 CRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSFQE 177
GF R++ SF+ P I T M++ L + +
Sbjct: 154 GLCGFNYRFN--------------------SFYRDQPHPFI------TSMVRALDEAMNK 187
Query: 178 LDRFYQELMDEHLDPNRTK--SELAQQEDIIDVLLQIRKNCGFKVDLTLDH--------- 226
L R + D D N+ + ++ D++D ++ RK G + D L H
Sbjct: 188 LQRANPD--DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPET 245
Query: 227 --------IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI-RSLIGGNKGF 277
I+ ++ AG + ++ + +A+ +L+KNP ++K E R L+ +
Sbjct: 246 GEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY 305
Query: 278 VNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
V++L Y+ V+ E +RL PT P + Y + + V + R
Sbjct: 306 KQ---VKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 362
Query: 338 DPEAW-ENPEEFYPERFID-SCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL 395
D W ++ EEF PERF + S I QH PFG G+R C G + L L +L
Sbjct: 363 DKTIWGDDVEEFRPERFENPSAIP---QH-AFKPFGNGQRACIGQQFALHEATLVLGMML 418
Query: 396 YKFDWE 401
FD+E
Sbjct: 419 KHFDFE 424
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 5/201 (2%)
Query: 202 QEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMK 261
+ED + +LL R + L+L +K ++ + AG +T + + L ++ +
Sbjct: 221 EEDALGILLAARDDN--NQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRE 278
Query: 262 KVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYA 321
+V+ E L + + + ++++ YL V++E +RL P V RE IQ C G+
Sbjct: 279 RVRQEQNKLQLSQE--LTAETLKKMPYLDQVLQEVLRLIPPVGGGF-RELIQDCQFQGFH 335
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN 381
P V DP+ + +PE+F PERF F +PFG G R C G
Sbjct: 336 FPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKE 395
Query: 382 MGIATVDLALANLLYKFDWEM 402
+ L L+ +FDW +
Sbjct: 396 FARLEMKLFATRLIQQFDWTL 416
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 158/365 (43%), Gaps = 35/365 (9%)
Query: 46 GLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNV 105
G +A++ Y RE L + + F P + EV + M+ + +N+
Sbjct: 83 GEGVAYAAPYPRMREQLNFLAEEL-TVAKFQNFAPSIQHEVRKFMK--ANWNKDEGEINI 139
Query: 106 SEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLT 165
+ ++ C+ FG+ D K R +F LL + + S +P + WI KL
Sbjct: 140 LDDCSAMIINTACQCLFGE--DLRKRLDAR-QFAQLLAK-MESCLIPAAV-FLPWILKLP 194
Query: 166 -GMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQE----DIIDVLLQIRKNCGFKV 220
R +++ EL E++ R K E AQ++ D++ LL G +
Sbjct: 195 LPQSYRCRDARAELQDILSEIIIA-----REKEE-AQKDTNTSDLLAGLLGAVYRDGTR- 247
Query: 221 DLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLM--KNPRAMKKVQLEIRSLIGGNKGFV 278
++ + +++ AG TS T W++ +LM +N R + K+ EI +
Sbjct: 248 -MSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEF----PAQL 302
Query: 279 NEDDV-QELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
N D+V +E+ + + +E++R P + +L+ R+ ++ + Y +P + + +
Sbjct: 303 NYDNVMEEMPFAEQCARESIRRDPPLVMLM-RKVLKPVQVGKYVVPEGDIIACSPLLSHQ 361
Query: 338 DPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYK 397
D EA+ NP E+ PER + K FGAG C G G+ V LA +L
Sbjct: 362 DEEAFPNPREWNPER------NMKLVDGAFCGFGAGVHKCIGEKFGLLQVKTVLATVLRD 415
Query: 398 FDWEM 402
+D+E+
Sbjct: 416 YDFEL 420
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 70/156 (44%), Gaps = 26/156 (16%)
Query: 227 IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQEL 286
I A+++NV +A + + T+ + +L+ NP M V L RSL+
Sbjct: 259 ILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDV-LADRSLV--------------- 302
Query: 287 HYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPE 346
+ ET+R +P V L IPR+ Q V+ G I T VF A RDPEA+E P+
Sbjct: 303 ---PRAIAETLRYKPPVQL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPD 358
Query: 347 EFYPER---FIDSCIDFKGQHFELIPFGAGRRICPG 379
F R I S +H + FG+G C G
Sbjct: 359 VFNIHREDLGIKSAFSGAARH---LAFGSGIHNCVG 391
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 141/332 (42%), Gaps = 29/332 (8%)
Query: 76 KKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGR 135
+ F P + EV + M + K +N+ E ++ C+ FG+ D K + R
Sbjct: 117 QNFVPAIQHEVRKFMAENWKEDEGV--INLLEDCGAMIINTACQCLFGE--DLRKRLNAR 172
Query: 136 SRFHTLLNETLVSFFVPDYFPLIGWIDKLT-GMMQRLQNSFQELDRFYQELMDEHLDPNR 194
F LL++ S F + W+ +L R + + EL + E++ R
Sbjct: 173 -HFAQLLSKMESSLIPAAVF--MPWLLRLPLPQSARCREARAELQKILGEIIVA-----R 224
Query: 195 TKSELAQQEDIIDVLLQIRKNCGFK-VDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYL 253
K E ++ + D+L + K ++L + +++ AG TS T W+M +L
Sbjct: 225 EKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL 284
Query: 254 M--KNPRAMKKVQLEIRSLIGGNKGFVNEDDV-QELHYLKAVVKETMRLQPTVPLLIPRE 310
M KN + + K+ EI +N D+V E+ + + V+E++R P + L++ R
Sbjct: 285 MHPKNKKWLDKLHKEIDEF----PAQLNYDNVMDEMPFAERCVRESIRRDPPL-LMVMRM 339
Query: 311 TIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPF 370
+ + Y +P + + D EA+ NP + PER D +D I F
Sbjct: 340 VKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA-----FIGF 392
Query: 371 GAGRRICPGLNMGIATVDLALANLLYKFDWEM 402
GAG C G + V LA ++D+++
Sbjct: 393 GAGVHKCIGQKFALLQVKTILATAFREYDFQL 424
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 141/332 (42%), Gaps = 29/332 (8%)
Query: 76 KKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGR 135
+ F P + EV + M + K +N+ E ++ C+ FG+ D K + R
Sbjct: 111 QNFVPAIQHEVRKFMAENWKEDEGV--INLLEDCGAMIINTACQCLFGE--DLRKRLNAR 166
Query: 136 SRFHTLLNETLVSFFVPDYFPLIGWIDKLT-GMMQRLQNSFQELDRFYQELMDEHLDPNR 194
F LL++ S F + W+ +L R + + EL + E++ R
Sbjct: 167 -HFAQLLSKMESSLIPAAVF--MPWLLRLPLPQSARCREARAELQKILGEIIVA-----R 218
Query: 195 TKSELAQQEDIIDVLLQIRKNCGFK-VDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYL 253
K E ++ + D+L + K ++L + +++ AG TS T W+M +L
Sbjct: 219 EKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL 278
Query: 254 M--KNPRAMKKVQLEIRSLIGGNKGFVNEDDV-QELHYLKAVVKETMRLQPTVPLLIPRE 310
M KN + + K+ EI +N D+V E+ + + V+E++R P + L++ R
Sbjct: 279 MHPKNKKWLDKLHKEIDEFPAQ----LNYDNVMDEMPFAERCVRESIRRDPPL-LMVMRM 333
Query: 311 TIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPF 370
+ + Y +P + + D EA+ NP + PER D +D I F
Sbjct: 334 VKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA-----FIGF 386
Query: 371 GAGRRICPGLNMGIATVDLALANLLYKFDWEM 402
GAG C G + V LA ++D+++
Sbjct: 387 GAGVHKCIGQKFALLQVKTILATAFREYDFQL 418
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 141/332 (42%), Gaps = 29/332 (8%)
Query: 76 KKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGR 135
+ F P + EV + M + K +N+ E ++ C+ FG+ D K + R
Sbjct: 126 QNFVPAIQHEVRKFMAENWKEDEGV--INLLEDCGAMIINTACQCLFGE--DLRKRLNAR 181
Query: 136 SRFHTLLNETLVSFFVPDYFPLIGWIDKLT-GMMQRLQNSFQELDRFYQELMDEHLDPNR 194
F LL++ S F + W+ +L R + + EL + E++ R
Sbjct: 182 -HFAQLLSKMESSLIPAAVF--MPWLLRLPLPQSARCREARAELQKILGEIIVA-----R 233
Query: 195 TKSELAQQEDIIDVLLQIRKNCGFK-VDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYL 253
K E ++ + D+L + K ++L + +++ AG TS T W+M +L
Sbjct: 234 EKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL 293
Query: 254 M--KNPRAMKKVQLEIRSLIGGNKGFVNEDDV-QELHYLKAVVKETMRLQPTVPLLIPRE 310
M KN + + K+ EI +N D+V E+ + + V+E++R P + L++ R
Sbjct: 294 MHPKNKKWLDKLHKEIDEFPAQ----LNYDNVMDEMPFAERCVRESIRRDPPL-LMVMRM 348
Query: 311 TIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPF 370
+ + Y +P + + D EA+ NP + PER D +D I F
Sbjct: 349 VKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA-----FIGF 401
Query: 371 GAGRRICPGLNMGIATVDLALANLLYKFDWEM 402
GAG C G + V LA ++D+++
Sbjct: 402 GAGVHKCIGQKFALLQVKTILATAFREYDFQL 433
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 152/340 (44%), Gaps = 40/340 (11%)
Query: 90 MEKISKSVAASNPVN---VSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETL 146
+++I + +SN V+E M S ++ G+ + D + H L N L
Sbjct: 132 LQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRDTQKAHILNN--L 189
Query: 147 VSFFVPD-YFPLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDI 205
+F D FP + + L M R ++ +E + + L E+L + SEL
Sbjct: 190 DNFKQFDKVFPAL--VAGLPIHMFRTAHNARE--KLAESLRHENLQKRESISEL------ 239
Query: 206 IDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQL 265
+ L++ N L+ K L+ ++ + A+T AT W++ +++NP AMK
Sbjct: 240 --ISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATE 296
Query: 266 EI-RSL--------IGGNKGFVNEDDVQELHYLKAVVKETMRLQ-PTVPLLIPRETIQKC 315
E+ R+L + GN +++ ++ +L L +++KE++RL ++ + +E
Sbjct: 297 EVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLH 356
Query: 316 VIDG-YAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDS---------CIDFKGQHF 365
+ DG Y I + + + DPE + +P F +R++D C K +++
Sbjct: 357 LEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYY 416
Query: 366 ELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLG 405
+PFG+G ICPG I + L +L F+ E+ G
Sbjct: 417 -YMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEG 455
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 152/340 (44%), Gaps = 40/340 (11%)
Query: 90 MEKISKSVAASNPVN---VSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETL 146
+++I + +SN V+E M S ++ G+ + D + H L N L
Sbjct: 132 LQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRDTQKAHILNN--L 189
Query: 147 VSFFVPD-YFPLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDI 205
+F D FP + + L M R ++ +E + + L E+L + SEL
Sbjct: 190 DNFKQFDKVFPAL--VAGLPIHMFRTAHNARE--KLAESLRHENLQKRESISEL------ 239
Query: 206 IDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQL 265
+ L++ N L+ K L+ ++ + A+T AT W++ +++NP AMK
Sbjct: 240 --ISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATE 296
Query: 266 EI-RSL--------IGGNKGFVNEDDVQELHYLKAVVKETMRLQ-PTVPLLIPRETIQKC 315
E+ R+L + GN +++ ++ +L L +++KE++RL ++ + +E
Sbjct: 297 EVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLH 356
Query: 316 VIDG-YAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDS---------CIDFKGQHF 365
+ DG Y I + + + DPE + +P F +R++D C K +++
Sbjct: 357 LEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYY 416
Query: 366 ELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLG 405
+PFG+G ICPG I + L +L F+ E+ G
Sbjct: 417 -YMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEG 455
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 228 KAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELH 287
+A+L+ ++V + A W M YL+ +P A++ V+ EI+ G K E+ +
Sbjct: 256 RAMLLQLWVTQGNAGPA-AFWVMGYLLTHPEALRAVREEIQ----GGKHLRLEERQKNTP 310
Query: 288 YLKAVVKETMRLQPTVPLLIPRETIQK---CVIDG--YAIPAKTRVFVNAWAIGR-DPEA 341
+V+ ET+RL T LI R+ Q C+ +G Y + R+ V + + DP+
Sbjct: 311 VFDSVLWETLRL--TAAALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQI 368
Query: 342 WENPEEFYPERFIDSCIDFKGQHFE--------LIPFGAGRRICPGLNMGIATVDLALAN 393
+ PE F +RF+++ K F+ +P+G +CPG + + + +
Sbjct: 369 HQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFT 428
Query: 394 LLYKFDWEM 402
+L +FD E+
Sbjct: 429 ILTRFDVEL 437
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 222 LTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNED 281
++L + +++ AG TS+ T W+M +LM +P +K ++ +R I +N +
Sbjct: 250 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLE-ALRKEIEEFPAQLNYN 307
Query: 282 DV-QELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPE 340
+V E+ + + +E++R P + L++ R+ + + Y +P + + D E
Sbjct: 308 NVMDEMPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEE 366
Query: 341 AWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDW 400
A+ P + PER D ++ I FGAG C G G+ V LA +D+
Sbjct: 367 AFPEPRRWDPER--DEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 419
Query: 401 EM 402
++
Sbjct: 420 QL 421
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 222 LTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNED 281
++L + +++ AG TS+ T W+M +LM +P +K ++ +R I +N +
Sbjct: 249 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLE-ALRKEIEEFPAQLNYN 306
Query: 282 DV-QELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPE 340
+V E+ + + +E++R P + L++ R+ + + Y +P + + D E
Sbjct: 307 NVMDEMPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEE 365
Query: 341 AWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDW 400
A+ P + PER D ++ I FGAG C G G+ V LA +D+
Sbjct: 366 AFPEPRRWDPER--DEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 418
Query: 401 EM 402
++
Sbjct: 419 QL 420
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 222 LTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNED 281
++L + +++ AG TS+ T W+M +LM +P +K ++ +R I +N +
Sbjct: 262 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLE-ALRKEIEEFPAQLNYN 319
Query: 282 DV-QELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPE 340
+V E+ + + +E++R P + L++ R+ + + Y +P + + D E
Sbjct: 320 NVMDEMPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEE 378
Query: 341 AWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDW 400
A+ P + PER D ++ I FGAG C G G+ V LA +D+
Sbjct: 379 AFPEPRRWDPER--DEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 431
Query: 401 EM 402
++
Sbjct: 432 QL 433
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 222 LTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNED 281
++L + +++ AG TS+ T W+M +LM +P +K ++ +R I +N +
Sbjct: 262 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLE-ALRKEIEEFPAQLNYN 319
Query: 282 DV-QELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPE 340
+V E+ + + +E++R P + L++ R+ + + Y +P + + D E
Sbjct: 320 NVMDEMPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEE 378
Query: 341 AWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDW 400
A+ P + PER D ++ I FGAG C G G+ V LA +D+
Sbjct: 379 AFPEPRRWDPER--DEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 431
Query: 401 EM 402
++
Sbjct: 432 QL 433
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 222 LTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNED 281
++L + +++ AG TS+ T W+M +LM +P +K ++ +R I +N +
Sbjct: 248 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLE-ALRKEIEEFPAQLNYN 305
Query: 282 DV-QELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPE 340
+V E+ + + +E++R P + L++ R+ + + Y +P + + D E
Sbjct: 306 NVMDEMPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEE 364
Query: 341 AWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDW 400
A+ P + PER D ++ I FGAG C G G+ V LA +D+
Sbjct: 365 AFPEPRRWDPER--DEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 417
Query: 401 EM 402
++
Sbjct: 418 QL 419
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 222 LTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNED 281
++L + +++ AG TS+ T W+M +LM +P +K ++ +R I +N +
Sbjct: 249 MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLE-ALRKEIEEFPAQLNYN 306
Query: 282 DV-QELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPE 340
+V E+ + + +E++R P + L++ R+ + + Y +P + + D E
Sbjct: 307 NVMDEMPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEE 365
Query: 341 AWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDW 400
A+ P + PER D ++ I FGAG C G G+ V LA +D+
Sbjct: 366 AFPEPRRWDPER--DEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 418
Query: 401 EM 402
++
Sbjct: 419 QL 420
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 283 VQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAW 342
VQ+ Y + V+E R P P ++ R + Q +G A P +V ++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 343 ENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRI----CPGLNMGIATVDLALANLLYKF 398
+P+EF PERF D F IP G G CPG + +A + +A L+
Sbjct: 319 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 399 DWEMPLGIKSHDLDFD 414
+++P DL D
Sbjct: 375 RYDVP----DQDLSID 386
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 22/159 (13%)
Query: 283 VQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAW 342
VQ+ Y + V+E R P P ++ R + Q +G A P +V ++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 343 ENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRI----CPGLNMGIATVDLALANLLYKF 398
+P+EF PERF D F IP G G CPG + +A + +A L+
Sbjct: 327 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 399 DWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSIMM 437
+++P DL D L LPK +M
Sbjct: 383 RYDVP----DQDLSIDFAR---------LPALPKSGFVM 408
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 283 VQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAW 342
VQ+ Y + V+E R P P ++ R + Q +G A P +V ++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 343 ENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRI----CPGLNMGIATVDLALANLLYKF 398
+P+EF PERF D F IP G G CPG + +A + +A L+
Sbjct: 319 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 399 DWEMPLGIKSHDLDFD 414
+++P DL D
Sbjct: 375 RYDVP----DQDLSID 386
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 283 VQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAW 342
VQ+ Y + V+E R P P ++ R + Q +G A P +V ++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 343 ENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRI----CPGLNMGIATVDLALANLLYKF 398
+P+EF PERF D F IP G G CPG + +A + +A L+
Sbjct: 319 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 399 DWEMPLGIKSHDLDFD 414
+++P DL D
Sbjct: 375 RYDVP----DQDLSID 386
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 283 VQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAW 342
VQ+ Y + V+E R P P ++ R + Q +G A P +V ++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 343 ENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRI----CPGLNMGIATVDLALANLLYKF 398
+P+EF PERF D F IP G G CPG + +A + +A L+
Sbjct: 327 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 399 DWEMPLGIKSHDLDFD 414
+++P DL D
Sbjct: 383 RYDVP----DQDLSID 394
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 283 VQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAW 342
VQ+ Y + V+E R P P ++ R + Q +G A P +V ++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 343 ENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRI----CPGLNMGIATVDLALANLLYKF 398
+P+EF PERF D F IP G G CPG + +A + +A L+
Sbjct: 327 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 399 DWEMPLGIKSHDLDFD 414
+++P DL D
Sbjct: 383 RYDVP----DQDLSID 394
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Query: 293 VKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPER 352
V+E R P P L + V + T V ++ + DP W++P+EF PER
Sbjct: 280 VQEVRRYYPFGPFLGAL-VKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPER 338
Query: 353 FIDSCIDFKGQHFELIPFGAGR----RICPGLNMGIATVDLALANLLYKFDWEMP 403
F + + F++IP G G CPG + I + +L L+++ ++++P
Sbjct: 339 FAEREENL----FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVP 389
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 140/350 (40%), Gaps = 64/350 (18%)
Query: 51 FSPYYEYWREIRKICVIHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNV-SEVM 109
F+ Y R++R++ V F++ R RP E V+ +++++++ + A PV++ E+
Sbjct: 88 FTAYGPNHRKLRRL-VAPAFSARRVDAMRPAVEAMVTGLVDRLAE-LPAGEPVDLRQELA 145
Query: 110 MSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTGMMQ 169
L I IG +D+ R F L++ G D +
Sbjct: 146 YPLP---IAVIGHLMGVPQDR----RDGFRALVD---------------GVFDTTLDQAE 183
Query: 170 RLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKA 229
N+ R Y E++D+ + R +D+ +L+ R + G L+ + ++
Sbjct: 184 AQANTA----RLY-EVLDQLIAAKRATP----GDDMTSLLIAARDDEGDGDRLSPEELRD 234
Query: 230 VLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYL 289
L+ + AG +T+ + A+ L+ P + V+ KG V DV
Sbjct: 235 TLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVR----------KGEVTWADV------ 278
Query: 290 KAVVKETMRLQPTVPLLIPRETIQKCVI-DGYAIPAKTRVFVNAWAIGRDPEAWENPEEF 348
V+ET+R +P V L R + + DG I + + A R P+ E+ + F
Sbjct: 279 ---VEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTF 335
Query: 349 YPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 398
R + E + FG G C G + V LAL +L +F
Sbjct: 336 DATRTVK----------EHLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 37/193 (19%)
Query: 227 IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQEL 286
++ ++ V VAG +T+ + AM ++P K++ +
Sbjct: 243 LRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK-------------------ENP 283
Query: 287 HYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPE 346
V+E +R PT+P+ R + ++G IP T VF+ A RDP + + +
Sbjct: 284 ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADAD 343
Query: 347 EFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD------- 399
F D + + I FG G C G + + A+A L + D
Sbjct: 344 RF------DITVKREAPS---IAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGE 394
Query: 400 --WEMPLGIKSHD 410
W LG+ D
Sbjct: 395 ITWRHELGVAGPD 407
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 37/193 (19%)
Query: 227 IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQEL 286
++ ++ V VAG +T+ + AM ++P K++ +
Sbjct: 233 LRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK-------------------ENP 273
Query: 287 HYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPE 346
V+E +R PT+P+ R + ++G IP T VF+ A RDP + + +
Sbjct: 274 ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADAD 333
Query: 347 EFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD------- 399
F D + + I FG G C G + + A+A L + D
Sbjct: 334 RF------DITVKREAPS---IAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGE 384
Query: 400 --WEMPLGIKSHD 410
W LG+ D
Sbjct: 385 ITWRHELGVAGPD 397
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 35/210 (16%)
Query: 203 EDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKK 262
+D++ L++++ + + L+ D + ++ + + +AG +TS + + L+ +P +
Sbjct: 209 DDLLSALIRVQDDDDGR--LSADELTSIALVLLLAGFETSVSLIGIGTYLLLTHPDQLAL 266
Query: 263 VQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMR-LQPTVPLLIPRETIQKCVIDGYA 321
V+ ++ L V+E +R + P P R ++ I G A
Sbjct: 267 VR-------------------RDPSALPNAVEEILRYIAP--PETTTRFAAEEVEIGGVA 305
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN 381
IP + V V A RDP+ + +P F D D +G + FG G C G
Sbjct: 306 IPQYSTVLVANGAANRDPKQFPDPHRF------DVTRDTRGH----LSFGQGIHFCMGRP 355
Query: 382 MGIATVDLALANLLYKFDWEMPLGIKSHDL 411
+ ++AL L +F + LGI + D+
Sbjct: 356 LAKLEGEVALRALFGRFP-ALSLGIDADDV 384
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 289 LKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIG--RDPEAWENPE 346
+ A+V+E +R +P P + R T + + G IPA V VN W + RD +A ++P+
Sbjct: 294 IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPD 350
Query: 347 EFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 398
F P R K + FG G C G + +AL ++ +F
Sbjct: 351 RFDPSR--------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 289 LKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIG--RDPEAWENPE 346
+ A+V+E +R +P P + R T + + G IPA V VN W + RD +A ++P+
Sbjct: 274 IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPD 330
Query: 347 EFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 398
F P R K + FG G C G + +AL ++ +F
Sbjct: 331 RFDPSR--------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 32/200 (16%)
Query: 200 AQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRA 259
A +D+ L+Q +N LT I + L + AG +T+ + +V A+ L +P
Sbjct: 208 APGDDLTSALIQASENGDH---LTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHP-- 262
Query: 260 MKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQ-PTVPLLIPRETIQKCVID 318
E R+L+ + AVV+ET+R PT +LI R + +
Sbjct: 263 ------EQRALVLSGEA-----------EWSAVVEETLRFSTPTSHVLI-RFAAEDVPVG 304
Query: 319 GYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICP 378
IPA + V+ A+GRD E +RF D +H I FG G +CP
Sbjct: 305 DRVIPAGDALIVSYGALGRD----ERAHGPTADRF-DLTRTSGNRH---ISFGHGPHVCP 356
Query: 379 GLNMGIATVDLALANLLYKF 398
G + +AL L +F
Sbjct: 357 GAALSRMEAGVALPALYARF 376
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 90/210 (42%), Gaps = 35/210 (16%)
Query: 203 EDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKK 262
+D++ L++++ + + L+ D + ++ + + +AG ++S + + L+ +P +
Sbjct: 209 DDLLSALIRVQDDDDGR--LSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLAL 266
Query: 263 VQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMR-LQPTVPLLIPRETIQKCVIDGYA 321
V+ ++ L V+E +R + P P R ++ I G A
Sbjct: 267 VR-------------------RDPSALPNAVEEILRYIAP--PETTTRFAAEEVEIGGVA 305
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN 381
IP + V V A RDP+ + +P F D D +G + FG G C G
Sbjct: 306 IPQYSTVLVANGAANRDPKQFPDPHRF------DVTRDTRGH----LSFGQGIHFCMGRP 355
Query: 382 MGIATVDLALANLLYKFDWEMPLGIKSHDL 411
+ ++AL L +F + LGI + D+
Sbjct: 356 LAKLEGEVALRALFGRFP-ALSLGIDADDV 384
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 90/210 (42%), Gaps = 35/210 (16%)
Query: 203 EDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKK 262
+D++ L++++ + + L+ D + ++ + + +AG ++S + + L+ +P +
Sbjct: 208 DDLLSALIRVQDDDDGR--LSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLAL 265
Query: 263 VQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMR-LQPTVPLLIPRETIQKCVIDGYA 321
V+ ++ L V+E +R + P P R ++ I G A
Sbjct: 266 VR-------------------RDPSALPNAVEEILRYIAP--PETTTRFAAEEVEIGGVA 304
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN 381
IP + V V A RDP+ + +P F D D +G + FG G C G
Sbjct: 305 IPQYSTVLVANGAANRDPKQFPDPHRF------DVTRDTRGH----LSFGQGIHFCMGRP 354
Query: 382 MGIATVDLALANLLYKFDWEMPLGIKSHDL 411
+ ++AL L +F + LGI + D+
Sbjct: 355 LAKLEGEVALRALFGRFP-ALSLGIDADDV 383
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 35/210 (16%)
Query: 203 EDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKK 262
+D++ L++++ + + L+ D + ++ + + +AG + S + + L+ +P +
Sbjct: 209 DDLLSALIRVQDDDDGR--LSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLAL 266
Query: 263 VQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMR-LQPTVPLLIPRETIQKCVIDGYA 321
V+ ++ L V+E +R + P P R ++ I G A
Sbjct: 267 VR-------------------RDPSALPNAVEEILRYIAP--PETTTRFAAEEVEIGGVA 305
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN 381
IP + V V A RDP+ + +P F D D +G + FG G C G
Sbjct: 306 IPQYSTVLVANGAANRDPKQFPDPHRF------DVTRDTRGH----LSFGQGIHFCMGRP 355
Query: 382 MGIATVDLALANLLYKFDWEMPLGIKSHDL 411
+ ++AL L +F + LGI + D+
Sbjct: 356 LAKLEGEVALRALFGRFP-ALSLGIDADDV 384
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 35/210 (16%)
Query: 203 EDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKK 262
+D++ L++++ + + L+ D + ++ + + +AG + S + + L+ +P +
Sbjct: 208 DDLLSALIRVQDDDDGR--LSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLAL 265
Query: 263 VQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMR-LQPTVPLLIPRETIQKCVIDGYA 321
V+ ++ L V+E +R + P P R ++ I G A
Sbjct: 266 VR-------------------RDPSALPNAVEEILRYIAP--PETTTRFAAEEVEIGGVA 304
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN 381
IP + V V A RDP+ + +P F D D +G + FG G C G
Sbjct: 305 IPQYSTVLVANGAANRDPKQFPDPHRF------DVTRDTRGH----LSFGQGIHFCMGRP 354
Query: 382 MGIATVDLALANLLYKFDWEMPLGIKSHDL 411
+ ++AL L +F + LGI + D+
Sbjct: 355 LAKLEGEVALRALFGRFP-ALSLGIDADDV 383
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 30/178 (16%)
Query: 221 DLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNE 280
DL D + + + + VAG +T+ + L+++P +++ + +R + G V+
Sbjct: 227 DLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHP---EQIDVLLR-----DPGAVS- 277
Query: 281 DDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPE 340
VV+E +R +V I R + + G I A V V+ + RD +
Sbjct: 278 ----------GVVEELLRFT-SVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAK 326
Query: 341 AWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 398
A+ENP+ F R +H + FG G C G N+ A +++AL L +
Sbjct: 327 AYENPDIFDARR--------NARHH--VGFGHGIHQCLGQNLARAELEIALGGLFARI 374
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 87/210 (41%), Gaps = 35/210 (16%)
Query: 203 EDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKK 262
+D++ L+ ++ + + L+ D + ++ + + +AG + S + + L+ +P +
Sbjct: 208 DDLLSALISVQDDDDGR--LSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLAL 265
Query: 263 VQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMR-LQPTVPLLIPRETIQKCVIDGYA 321
V+ + +L V+E +R + P P R ++ I G A
Sbjct: 266 VRADPSAL-------------------PNAVEEILRYIAP--PETTTRFAAEEVEIGGVA 304
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN 381
IP + V V A RDP + +P F D D +G + FG G C G
Sbjct: 305 IPQYSTVLVANGAANRDPSQFPDPHRF------DVTRDTRGH----LSFGQGIHFCMGRP 354
Query: 382 MGIATVDLALANLLYKFDWEMPLGIKSHDL 411
+ ++AL L +F + LGI + D+
Sbjct: 355 LAKLEGEVALRALFGRFP-ALSLGIDADDV 383
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 266 EIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVID----GYA 321
EIRS+I N G + ++++ K+VV E +R +P V R + VI+ +
Sbjct: 324 EIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAK-KDLVIESHDAAFK 382
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFI 354
+ A ++ RDP+ ++ +EF PERF+
Sbjct: 383 VKAGEMLYGYQPLATRDPKIFDRADEFVPERFV 415
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 266 EIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVID----GYA 321
EIRS+I N G + ++++ K+VV E +R +P V R + VI+ +
Sbjct: 324 EIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAK-KDLVIESHDAAFK 382
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFI 354
+ A ++ RDP+ ++ +EF PERF+
Sbjct: 383 VKAGEMLYGYQPLATRDPKIFDRADEFVPERFV 415
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 25/167 (14%)
Query: 232 MNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKA 291
+ + VAG +T A+ + W+ L P K+V + A
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRV-------------------AESEEAALA 256
Query: 292 VVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPE 351
+E +RL P +L R + ++ +P T + ++ + R + + E F PE
Sbjct: 257 AFQEALRLYPPAWILT-RRLERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRPE 313
Query: 352 RFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 398
RF++ G++F PFG G+R+C G + + + L +F
Sbjct: 314 RFLEERGTPSGRYF---PFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 74/196 (37%), Gaps = 33/196 (16%)
Query: 203 EDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKK 262
ED++ L+ + ++ LT D I A + +AG +T+ + A +++ P
Sbjct: 225 EDLMSGLVAVEESGD---QLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAA 281
Query: 263 VQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAI 322
+ + G++ AV++ETMR P V L+ R I + +
Sbjct: 282 LAAD------GSRA-------------SAVIEETMRYDPPV-QLVSRYAGDDLTIGTHTV 321
Query: 323 PAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNM 382
P + + A RDP P+ F P+R + FG G C G +
Sbjct: 322 PKGDTMLLLLAAAHRDPTIVGAPDRFDPDR----------AQIRHLGFGKGAHFCLGAPL 371
Query: 383 GIATVDLALANLLYKF 398
+AL L +F
Sbjct: 372 ARLEATVALPALAARF 387
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 83/197 (42%), Gaps = 32/197 (16%)
Query: 202 QEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMK 261
+ D++ +LLQ + L+ + A++ + AG DT+ + +A+ L+++P A++
Sbjct: 222 ENDVLTMLLQAEADGS---RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALE 278
Query: 262 KVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYA 321
V+ E G + + L + + T+R R+ ++ C G +
Sbjct: 279 LVKAE--------PGLMRNALDEVLRFENILRIGTVRFA--------RQDLEYC---GAS 319
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN 381
I VF+ + RD + P+ F D + + +G G +CPG++
Sbjct: 320 IKKGEMVFLLIPSALRDGTVFSRPDVF----------DVRRDTSASLAYGRGPHVCPGVS 369
Query: 382 MGIATVDLALANLLYKF 398
+ ++A+ + +F
Sbjct: 370 LARLEAEIAVGTIFRRF 386
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 46/209 (22%)
Query: 202 QEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMK 261
Q+D+I +LL+ R+ K LT + + + + +AG +T+ + ++ L+++P +
Sbjct: 203 QQDMISMLLKGRE----KDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLL 258
Query: 262 KVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQ-PT-VPLLIPRETIQKCVIDG 319
K++ E LIG V+E +R + PT + + E I C G
Sbjct: 259 KLR-ENPDLIG------------------TAVEECLRYESPTQMTARVASEDIDIC---G 296
Query: 320 YAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPG 379
I +V++ A RDP + NP+ F D + FG G +C G
Sbjct: 297 VTIRQGEQVYLLLGAANRDPSIFTNPDVF----------DITRSPNPHLSFGHGHHVCLG 346
Query: 380 LNMGIATVDLALANLLYK--------FDW 400
++ +A+ LL + F+W
Sbjct: 347 SSLARLEAQIAINTLLQRMPSLNLADFEW 375
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 29/169 (17%)
Query: 232 MNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKA 291
+ + VAG +T A+ + W+ L P K+V + A
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRV-------------------AESEEAALA 256
Query: 292 VVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR--DPEAWENPEEFY 349
+E +RL P +L R + ++ +P T + ++ + R PE E F
Sbjct: 257 AFQEALRLYPPAWILT-RRLERPLLLGEDRLPQGTTLVLSPYVTQRLYFPEG----EAFQ 311
Query: 350 PERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 398
PERF+ G++F PFG G+R+C G + + + L +F
Sbjct: 312 PERFLAERGTPSGRYF---PFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 83/197 (42%), Gaps = 32/197 (16%)
Query: 202 QEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMK 261
+ D++ +LLQ + L+ + A++ + AG DT+ + +A+ L+++P A++
Sbjct: 222 ENDVLTMLLQAEADGS---RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALE 278
Query: 262 KVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYA 321
V+ E G + + L + + T+R R+ ++ C G +
Sbjct: 279 LVKAE--------PGLMRNALDEVLRFDNILRIGTVRFA--------RQDLEYC---GAS 319
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN 381
I VF+ + RD + P+ F D + + +G G +CPG++
Sbjct: 320 IKKGEMVFLLIPSALRDGTVFSRPDVF----------DVRRDTSASLAYGRGPHVCPGVS 369
Query: 382 MGIATVDLALANLLYKF 398
+ ++A+ + +F
Sbjct: 370 LARLEAEIAVGTIFRRF 386
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 23/149 (15%)
Query: 221 DLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNE 280
DLT+D + NV + G +T+ + A+ L P + ++ G +
Sbjct: 238 DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALR----------DGSADV 287
Query: 281 DDVQELHYLKAVVKETMR-LQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDP 339
D VV+E +R P + +L R T I+G +P+ T V A RDP
Sbjct: 288 D---------TVVEEVLRWTSPAMHVL--RVTTADVTINGRDLPSGTPVVAWLPAANRDP 336
Query: 340 EAWENPEEFYPERFIDSCIDF-KGQHFEL 367
+++P+ F P R + I F G H L
Sbjct: 337 AEFDDPDTFLPGRKPNRHITFGHGMHHCL 365
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 228 KAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDD----- 282
+A+++ ++ + A W + +L+KNP A+ V+ E+ S++ + V++
Sbjct: 265 RALVLQLWATQGNMGPA-AFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQK 323
Query: 283 -VQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVI---DG--YAIPAKTRVFVNAW-AI 335
+ L +V+ E++RL T I RE + + DG + + R+ + + +
Sbjct: 324 VLDSTPVLDSVLSESLRL--TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSP 381
Query: 336 GRDPEAWENPEEFYPERFI--------DSCIDFKGQHFELIPFGAGRRICPGLNMGIATV 387
RDPE + +PE F RF+ D D K +P+GAG C G + + ++
Sbjct: 382 QRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSI 441
Query: 388 DLALANLLYKFDWEM 402
+ +L D E+
Sbjct: 442 KQFVFLVLVHLDLEL 456
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 228 KAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDD----- 282
+A+++ ++ + A W + +L+KNP A+ V+ E+ S++ + V++
Sbjct: 253 RALVLQLWATQGNMGPA-AFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQK 311
Query: 283 -VQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVI---DG--YAIPAKTRVFVNAW-AI 335
+ L +V+ E++RL T I RE + + DG + + R+ + + +
Sbjct: 312 VLDSTPVLDSVLSESLRL--TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSP 369
Query: 336 GRDPEAWENPEEFYPERFI--------DSCIDFKGQHFELIPFGAGRRICPGLNMGIATV 387
RDPE + +PE F RF+ D D K +P+GAG C G + + ++
Sbjct: 370 QRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSI 429
Query: 388 DLALANLLYKFDWEM 402
+ +L D E+
Sbjct: 430 KQFVFLVLVHLDLEL 444
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 14/138 (10%)
Query: 281 DDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPE 340
D V+E LKAV +E +R P V I R T +K I I V V + RD E
Sbjct: 233 DYVREKGALKAV-EEALRFSPPVMRTI-RVTKEKVKIRDQVIDEGELVRVWIASANRDEE 290
Query: 341 AWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDW 400
+++P+ F P+R + + FG+G +C G + +AL KF
Sbjct: 291 VFKDPDSFIPDRTPNPHLS----------FGSGIHLCLGAPLARLEARIALEEFAKKF-- 338
Query: 401 EMPLGIKSHDLDFDVLLG 418
+ +K +D +VL G
Sbjct: 339 RVKEIVKKEKIDNEVLNG 356
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 85/227 (37%), Gaps = 41/227 (18%)
Query: 172 QNSFQELDRFYQELMDEHLDPNRTKSELAQQ-EDIIDVLLQIRKNCGFKVDLTLDHIKAV 230
Q + E+ + L+D S+ Q ED++ L++ G + LT + + +
Sbjct: 208 QTAMAEMSGYLSRLID---------SKRGQDGEDLLSALVRTSDEDGSR--LTSEELLGM 256
Query: 231 LMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLK 290
+ VAG +T+ + M L+ +P + ++ ++ L
Sbjct: 257 AHILLVAGHETTVNLIANGMYALLSHPDQLAALR-------------------ADMTLLD 297
Query: 291 AVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYP 350
V+E +R + V R ++ +DG IPA V V R PE + +P F
Sbjct: 298 GAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF-- 355
Query: 351 ERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYK 397
D D G + FG G C G + +A+ LL +
Sbjct: 356 ----DIRRDTAGH----LAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 85/227 (37%), Gaps = 41/227 (18%)
Query: 172 QNSFQELDRFYQELMDEHLDPNRTKSELAQQ-EDIIDVLLQIRKNCGFKVDLTLDHIKAV 230
Q + E+ + L+D S+ Q ED++ L++ G + LT + + +
Sbjct: 208 QTAMAEMSGYLSRLID---------SKRGQDGEDLLSALVRTSDEDGSR--LTSEELLGM 256
Query: 231 LMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLK 290
+ VAG +T+ + M L+ +P + ++ ++ L
Sbjct: 257 AHILLVAGHETTVNLIANGMYALLSHPDQLAALR-------------------ADMTLLD 297
Query: 291 AVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYP 350
V+E +R + V R ++ +DG IPA V V R PE + +P F
Sbjct: 298 GAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF-- 355
Query: 351 ERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYK 397
D D G + FG G C G + +A+ LL +
Sbjct: 356 ----DIRRDTAGH----LAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 85/227 (37%), Gaps = 41/227 (18%)
Query: 172 QNSFQELDRFYQELMDEHLDPNRTKSELAQQ-EDIIDVLLQIRKNCGFKVDLTLDHIKAV 230
Q + E+ + L+D S+ Q ED++ L++ G + LT + + +
Sbjct: 208 QTAMAEMSGYLSRLID---------SKRGQDGEDLLSALVRTSDEDGSR--LTSEELLGM 256
Query: 231 LMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLK 290
+ VAG +T+ + M L+ +P + ++ ++ L
Sbjct: 257 AHILLVAGHETTVNLIANGMYALLSHPDQLAALR-------------------ADMTLLD 297
Query: 291 AVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYP 350
V+E +R + V R ++ +DG IPA V V R PE + +P F
Sbjct: 298 GAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF-- 355
Query: 351 ERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYK 397
D D G + FG G C G + +A+ LL +
Sbjct: 356 ----DIRRDTAGH----LAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 221 DLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNE 280
++T + + + L AG +T+ + + + L+ P ++ E+R
Sbjct: 233 NVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRP----ELPAELR------------ 276
Query: 281 DDVQELHYLKAVVKETMRL---QPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGR 337
++ + A V E +R+ ++PL + E I+ + G +PA V
Sbjct: 277 ---KDPDLMPAAVDELLRVLSVADSIPLRVAAEDIE---LSGRTVPADDGVIALLAGANH 330
Query: 338 DPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYK 397
DPE +++PE +DF + FG G C G ++ +++AL LL +
Sbjct: 331 DPEQFDDPER----------VDFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRR 380
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 266 EIRSLIGG-NKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPA 324
EIR I G V + ++++ K+VV E++R++P VP P+ K + A
Sbjct: 306 EIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVP---PQYGKAKSNFTIESHDA 362
Query: 325 KTRVFVNAWAIG------RDPEAWENPEEFYPERFI 354
V G +DP+ ++ PEE+ P+RF+
Sbjct: 363 TFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFV 398
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 65/173 (37%), Gaps = 28/173 (16%)
Query: 263 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 306
VQ+ L+ GN VN +L LKA V+E R V L
Sbjct: 230 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTAVALA 289
Query: 307 IPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE 366
I R + +I + A + + + RD E +ENP+EF R K +
Sbjct: 290 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 341
Query: 367 LIPFGAGRRICPGLNMGIATVDLALANLLYKF---DWEMPLG-IKSHDLDFDV 415
+ FG G C ++ A + + L KF +PLG I L+ DV
Sbjct: 342 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDV 394
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 65/173 (37%), Gaps = 28/173 (16%)
Query: 263 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 306
VQ+ L+ GN VN +L LKA V+E R V L
Sbjct: 229 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTAVALA 288
Query: 307 IPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE 366
I R + +I + A + + + RD E +ENP+EF R K +
Sbjct: 289 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 340
Query: 367 LIPFGAGRRICPGLNMGIATVDLALANLLYKF---DWEMPLG-IKSHDLDFDV 415
+ FG G C ++ A + + L KF +PLG I L+ DV
Sbjct: 341 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDV 393
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 309 RETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELI 368
R ++ I G I A V+V+ A RDPE + +P+ IDF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 369 PFGAGRRICPG 379
FG G CPG
Sbjct: 345 SFGFGPHYCPG 355
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 309 RETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELI 368
R ++ I G I A V+V+ A RDPE + +P+ IDF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 369 PFGAGRRICPG 379
FG G CPG
Sbjct: 345 SFGFGPHYCPG 355
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 309 RETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELI 368
R ++ I G I A V+V+ A RDPE + +P+ IDF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 369 PFGAGRRICPG 379
FG G CPG
Sbjct: 345 SFGFGPHYCPG 355
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 309 RETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELI 368
R ++ I G I A V+V+ A RDPE + +P+ IDF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 369 PFGAGRRICPG 379
FG G CPG
Sbjct: 345 SFGFGPHYCPG 355
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 78/197 (39%), Gaps = 33/197 (16%)
Query: 202 QEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMK 261
++D++ +L + + + D +I A + + AG DT++++ A+ L +NP +
Sbjct: 235 KDDVMSLLANSKLDGNYIDD---KYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLA 291
Query: 262 KVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYA 321
+ + + +V E +R V + R + + G
Sbjct: 292 LAK-------------------SDPALIPRLVDEAVRWTAPVKSFM-RTALADTEVRGQN 331
Query: 322 IPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN 381
I R+ ++ + RD E + NP+EF R F +H + FG G +C G +
Sbjct: 332 IKRGDRIMLSYPSANRDEEVFSNPDEFDITR-------FPNRH---LGFGWGAHMCLGQH 381
Query: 382 MGIATVDLALANLLYKF 398
+ + + LL K
Sbjct: 382 LAKLEMKIFFEELLPKL 398
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 309 RETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELI 368
R ++ I G I A V+V+ A RDPE + +P+ IDF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 369 PFGAGRRICPG 379
FG G CPG
Sbjct: 345 SFGFGPHYCPG 355
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 309 RETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELI 368
R ++ I G I A V+V+ A RDPE + +P+ IDF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 369 PFGAGRRICPG 379
FG G CPG
Sbjct: 345 SFGFGPHYCPG 355
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 309 RETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELI 368
R ++ I G I A V+V+ A RDPE + +P+ IDF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 369 PFGAGRRICPG 379
FG G CPG
Sbjct: 345 SFGFGPHYCPG 355
>pdb|1NKT|A Chain A, Crystal Structure Of The Seca Protein Translocation Atpase
From Mycobacterium Tuberculosis Complex With Adpbs
pdb|1NKT|B Chain B, Crystal Structure Of The Seca Protein Translocation Atpase
From Mycobacterium Tuberculosis Complex With Adpbs
pdb|1NL3|A Chain A, Crystal Structure Of The Seca Protein Translocation Atpase
From Mycobacterium Tuberculosis In Apo Form
pdb|1NL3|B Chain B, Crystal Structure Of The Seca Protein Translocation Atpase
From Mycobacterium Tuberculosis In Apo Form
Length = 922
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 119 RIGFGKRYDEDKATSGRSRFHTLL---NETLVSFFVPDYFPLIGWIDKLTGMMQRLQNSF 175
R+ G+RY+E + ++ H + N+TL + + +YF L DKL GM Q
Sbjct: 353 RVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRL---YDKLAGMTGTAQTEA 409
Query: 176 QELDRFYQ 183
EL Y+
Sbjct: 410 AELHEIYK 417
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 263 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 306
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 230 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTATALA 289
Query: 307 IPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE 366
I R + +I + A + + + RD E +ENP+EF R K +
Sbjct: 290 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 341
Query: 367 LIPFGAGRRICPGLNMGIATVDLALANLLYKF---DWEMPLG-IKSHDLDFDV 415
+ FG G C ++ A + + L KF +PLG I L+ DV
Sbjct: 342 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDV 394
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 263 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 306
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 229 VQIAFLLLVAGNAAMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 288
Query: 307 IPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE 366
I R + +I + A + + + RD E +ENP+EF R K +
Sbjct: 289 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 340
Query: 367 LIPFGAGRRICPGLNMGIATVDLALANLLYKF---DWEMPLG-IKSHDLDFDV 415
+ FG G C ++ A + + L KF +PLG I L+ DV
Sbjct: 341 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDV 393
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 263 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 306
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 229 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTATALA 288
Query: 307 IPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE 366
I R + +I + A + + + RD E +ENP+EF R K +
Sbjct: 289 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 340
Query: 367 LIPFGAGRRICPGLNMGIATVDLALANLLYKF---DWEMPLG-IKSHDLDFDV 415
+ FG G C ++ A + + L KF +PLG I L+ DV
Sbjct: 341 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDV 393
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 263 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 306
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 229 VQIAFLLLVAGNANMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 288
Query: 307 IPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE 366
I R + +I + A + + + RD E +ENP+EF R K +
Sbjct: 289 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 340
Query: 367 LIPFGAGRRICPGLNMGIATVDLALANLLYKF---DWEMPLG-IKSHDLDFDV 415
+ FG G C ++ A + + L KF +PLG I L+ DV
Sbjct: 341 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDV 393
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 65/178 (36%), Gaps = 29/178 (16%)
Query: 221 DLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNE 280
++T + +K + + + G +T A + + + L+ NP +++L S +
Sbjct: 229 NVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNP---GQIELLFESPEKAER----- 280
Query: 281 DDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPE 340
VV E +R V PR I+ VIDG I A V + RD
Sbjct: 281 -----------VVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEA 329
Query: 341 AWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 398
+P+ +D + FG G C G + + + +A L +F
Sbjct: 330 LTPDPD----------VLDANRAAVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRF 377
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 263 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 306
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 231 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 290
Query: 307 IPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE 366
I R + +I + A + + + RD E +ENP+EF R K +
Sbjct: 291 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 342
Query: 367 LIPFGAGRRICPGLNMGIATVDLALANLLYKF---DWEMPLG-IKSHDLDFDV 415
+ FG G C ++ A + + L KF +PLG I L+ DV
Sbjct: 343 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDV 395
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 263 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 306
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 230 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 289
Query: 307 IPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE 366
I R + +I + A + + + RD E +ENP+EF R K +
Sbjct: 290 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 341
Query: 367 LIPFGAGRRICPGLNMGIATVDLALANLLYKF---DWEMPLG-IKSHDLDFDV 415
+ FG G C ++ A + + L KF +PLG I L+ DV
Sbjct: 342 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDV 394
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 263 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 306
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 229 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 288
Query: 307 IPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE 366
I R + +I + A + + + RD E +ENP+EF R K +
Sbjct: 289 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 340
Query: 367 LIPFGAGRRICPGLNMGIATVDLALANLLYKF---DWEMPLG-IKSHDLDFDV 415
+ FG G C ++ A + + L KF +PLG I L+ DV
Sbjct: 341 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDV 393
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 263 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 306
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 230 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 289
Query: 307 IPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE 366
I R + +I + A + + + RD E +ENP+EF R K +
Sbjct: 290 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 341
Query: 367 LIPFGAGRRICPGLNMGIATVDLALANLLYKF---DWEMPLG-IKSHDLDFDV 415
+ FG G C ++ A + + L KF +PLG I L+ DV
Sbjct: 342 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDV 394
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 21/130 (16%)
Query: 223 TLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDD 282
T+D + + N+ G DT AA + +L ++P + ++
Sbjct: 220 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLR------------------ 261
Query: 283 VQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAW 342
+ + A E MR PTV + R + DG I V++ + DP ++
Sbjct: 262 -ERPDLIPAAADELMRRYPTV--AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASF 318
Query: 343 ENPEEFYPER 352
E PEE +R
Sbjct: 319 EAPEEVRFDR 328
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 263 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 306
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 229 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 288
Query: 307 IPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE 366
I R + +I + A + + + RD E +ENP+EF R K +
Sbjct: 289 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 340
Query: 367 LIPFGAGRRICPGLNMGIATVDLALANLLYKF---DWEMPLG-IKSHDLDFDV 415
+ FG G C ++ A + + L KF +PLG I L+ DV
Sbjct: 341 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDV 393
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 284 QELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWE 343
+E YLKA+ +E +R P V + R+T ++ + I V V + RD E +
Sbjct: 236 EENLYLKAI-EEALRYSPPV-MRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFH 293
Query: 344 NPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 398
+ E+F P+R + + FG+G +C G + +A+ +F
Sbjct: 294 DGEKFIPDRNPNPHLS----------FGSGIHLCLGAPLARLEARIAIEEFSKRF 338
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 284 QELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWE 343
+E YLKA+ +E +R P V + R+T ++ + I V V + RD E +
Sbjct: 236 EENLYLKAI-EEALRYSPPV-MRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFH 293
Query: 344 NPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF 398
+ E+F P+R + + FG+G +C G + +A+ +F
Sbjct: 294 DGEKFIPDRNPNPHLS----------FGSGIHLCLGAPLARLEARIAIEEFSKRF 338
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 263 VQLEIRSLIGGNKGFVN---------EDDVQELHYLKA-------VVKETMRLQPTVPLL 306
VQ+ L+ GN VN +L LKA V+E R L
Sbjct: 229 VQIAFLLLVAGNAVMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA 288
Query: 307 IPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFE 366
I R + +I + A + + + RD E +ENP+EF R K +
Sbjct: 289 IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR--------KWPPQD 340
Query: 367 LIPFGAGRRICPGLNMGIATVDLALANLLYKF---DWEMPLG-IKSHDLDFDV 415
+ FG G C ++ A + + L KF +PLG I L+ DV
Sbjct: 341 PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDV 393
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 31/179 (17%)
Query: 205 IIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQ 264
++ LL + G + L+ + + A+ M + +AG +T+ + + L+ +P +K+
Sbjct: 206 LLSSLLAVSDEDGDR--LSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKLL 262
Query: 265 LEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPA 324
E SLI + V+E +R V R T + G IPA
Sbjct: 263 AEDPSLI------------------SSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPA 304
Query: 325 KTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMG 383
V + A RD + W PE P+R +D D G F FG G C G +
Sbjct: 305 GEMVMLGLAAANRDAD-W-MPE---PDR-LDITRDASGGVF----FGHGIHFCLGAQLA 353
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 289 LKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEF 348
L +V+E +R V + R + G I A + +N A DP + P +F
Sbjct: 322 LPGIVEEAIRWTTPVQHFM-RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKF 380
Query: 349 YPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD 399
P R + +H + FGAG C GL++ + + L LL + D
Sbjct: 381 DPTRPAN-------RH---LAFGAGSHQCLGLHLARLEMRVLLDVLLDRVD 421
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 60/162 (37%), Gaps = 29/162 (17%)
Query: 222 LTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNED 281
L+ + + A+ M + +AG +T+ + + L+ +P +K+ E SLI
Sbjct: 221 LSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKLLAEDPSLI---------- 269
Query: 282 DVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEA 341
+ V+E +R V R T + G IPA V + A RD +
Sbjct: 270 --------SSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADW 321
Query: 342 WENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMG 383
P+ +D D G F FG G C G +
Sbjct: 322 MPEPDR------LDITRDASGGVF----FGHGIHFCLGAQLA 353
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,602,868
Number of Sequences: 62578
Number of extensions: 520042
Number of successful extensions: 1566
Number of sequences better than 100.0: 167
Number of HSP's better than 100.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 1228
Number of HSP's gapped (non-prelim): 168
length of query: 439
length of database: 14,973,337
effective HSP length: 102
effective length of query: 337
effective length of database: 8,590,381
effective search space: 2894958397
effective search space used: 2894958397
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)