Query         013651
Match_columns 439
No_of_seqs    200 out of 1940
Neff          11.0
Searched_HMMs 46136
Date          Fri Mar 29 06:01:23 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013651.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013651hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 3.7E-80   8E-85  577.5  40.4  421    1-435    63-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 1.2E-75 2.6E-80  538.7  35.7  416    1-435    69-499 (499)
  3 PLN03234 cytochrome P450 83B1; 100.0 1.3E-74 2.7E-79  558.9  43.0  429    1-435    65-499 (499)
  4 PLN02971 tryptophan N-hydroxyl 100.0   2E-73 4.4E-78  552.8  39.6  427    1-434    96-533 (543)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 1.8E-72 3.9E-77  544.5  41.2  430    1-435    70-509 (517)
  6 PLN00110 flavonoid 3',5'-hydro 100.0 2.6E-72 5.5E-77  540.2  40.6  425    1-435    67-497 (504)
  7 PLN02966 cytochrome P450 83A1  100.0 3.9E-72 8.5E-77  540.7  42.0  428    1-433    66-498 (502)
  8 PLN02183 ferulate 5-hydroxylas 100.0 2.7E-72   6E-77  543.1  40.1  423    1-434    72-511 (516)
  9 PLN03112 cytochrome P450 famil 100.0 2.9E-71 6.2E-76  537.1  41.3  432    1-435    68-508 (514)
 10 PLN00168 Cytochrome P450; Prov 100.0 5.9E-71 1.3E-75  534.2  40.2  426    1-435    74-517 (519)
 11 KOG0157 Cytochrome P450 CYP4/C 100.0 1.7E-71 3.7E-76  530.1  34.1  418    1-436    74-497 (497)
 12 PLN02169 fatty acid (omega-1)- 100.0   7E-71 1.5E-75  529.2  37.6  416    3-435    75-500 (500)
 13 PLN02394 trans-cinnamate 4-mon 100.0 3.8E-70 8.3E-75  528.3  40.0  425    1-435    67-502 (503)
 14 PTZ00404 cytochrome P450; Prov 100.0 4.5E-70 9.7E-75  525.0  40.0  412    1-434    65-482 (482)
 15 PLN02655 ent-kaurene oxidase   100.0 7.6E-70 1.6E-74  519.9  39.7  420    1-437    36-466 (466)
 16 PLN03018 homomethionine N-hydr 100.0 1.9E-69 4.1E-74  521.1  42.1  427    1-434    79-523 (534)
 17 PLN02290 cytokinin trans-hydro 100.0 7.7E-70 1.7E-74  527.4  37.8  413    1-435    97-515 (516)
 18 PLN02738 carotene beta-ring hy 100.0 2.8E-69   6E-74  525.4  39.4  413    1-436   168-596 (633)
 19 KOG0159 Cytochrome P450 CYP11/ 100.0 2.9E-69 6.4E-74  484.8  33.5  417    2-435    91-518 (519)
 20 PLN03195 fatty acid omega-hydr 100.0 5.3E-69 1.2E-73  521.1  35.6  424    1-435    68-516 (516)
 21 PLN02426 cytochrome P450, fami 100.0 6.9E-68 1.5E-72  507.7  38.4  405   11-436    86-501 (502)
 22 PLN02500 cytochrome P450 90B1  100.0 8.4E-68 1.8E-72  509.5  36.2  398    1-433    79-488 (490)
 23 PF00067 p450:  Cytochrome P450 100.0 4.5E-68 9.8E-73  512.0  29.8  396    1-406    37-441 (463)
 24 PLN02936 epsilon-ring hydroxyl 100.0 6.6E-67 1.4E-71  501.8  37.1  415    1-435    53-482 (489)
 25 PLN02774 brassinosteroid-6-oxi 100.0 6.6E-66 1.4E-70  492.4  36.8  392    1-433    67-462 (463)
 26 PLN03141 3-epi-6-deoxocathaste 100.0 2.2E-65 4.7E-70  487.7  35.4  396    1-435    48-450 (452)
 27 PLN02196 abscisic acid 8'-hydr 100.0 1.4E-64 3.1E-69  482.8  35.8  389    1-434    72-462 (463)
 28 PLN02302 ent-kaurenoic acid ox 100.0 3.4E-63 7.5E-68  479.5  37.9  400    1-436    85-489 (490)
 29 PLN02987 Cytochrome P450, fami 100.0 1.3E-62 2.9E-67  467.6  37.8  396    1-435    71-469 (472)
 30 KOG0684 Cytochrome P450 [Secon 100.0 5.4E-57 1.2E-61  395.7  28.7  407    1-435    68-485 (486)
 31 COG2124 CypX Cytochrome P450 [ 100.0 9.3E-56   2E-60  412.9  32.3  360    9-434    49-410 (411)
 32 PLN02648 allene oxide synthase 100.0 2.3E-54 5.1E-59  408.0  27.8  369    1-406    59-463 (480)
 33 PF12554 MOZART1:  Mitotic-spin  77.3       9 0.00019   23.4   4.6   43  225-267     5-47  (48)
 34 PF12508 DUF3714:  Protein of u  65.0     1.9   4E-05   35.9  -0.3   44  285-330    51-94  (200)
 35 PF14459 Prok-E2_C:  Prokaryoti  62.7     2.6 5.6E-05   30.3   0.1   18  363-380   103-120 (131)
 36 PF05952 ComX:  Bacillus compet  59.9     4.7  0.0001   25.6   0.9   23  249-271     5-27  (57)
 37 PF09201 SRX:  SRX;  InterPro:   55.5     9.9 0.00021   29.0   2.1   23  375-397    18-40  (148)
 38 PRK06789 flagellar motor switc  54.9      14 0.00031   25.0   2.6   40  292-331    21-62  (74)
 39 COG2101 SPT15 TATA-box binding  53.5     5.1 0.00011   31.9   0.4   36  346-381    35-70  (185)
 40 COG1759 5-formaminoimidazole-4  39.8      50  0.0011   29.6   4.2   69  290-391   276-351 (361)
 41 TIGR03779 Bac_Flav_CT_M Bacter  39.3     6.5 0.00014   36.6  -1.2   46  284-331   253-298 (410)
 42 KOG3506 40S ribosomal protein   38.5      14 0.00031   23.0   0.6   10  369-378    13-22  (56)
 43 PF11138 DUF2911:  Protein of u  37.9      35 0.00076   26.8   2.8   42  310-352    51-99  (145)
 44 KOG3302 TATA-box binding prote  33.7      18 0.00039   29.6   0.6   56  346-401    50-116 (200)
 45 PF14129 DUF4296:  Domain of un  33.2 1.7E+02  0.0037   20.5   7.5   51  222-272    29-79  (87)
 46 PF12444 Sox_N:  Sox developmen  31.2      31 0.00067   24.1   1.4   20  385-404    60-79  (84)
 47 cd08318 Death_NMPP84 Death dom  30.7 1.8E+02   0.004   20.3   5.3   42   53-97     16-60  (86)
 48 PF14550 Peptidase_U35_2:  Puta  30.1      33 0.00073   26.0   1.5   21  310-330    72-92  (122)
 49 cd04518 TBP_archaea archaeal T  29.9      19 0.00041   29.4   0.2   35  346-380    29-63  (174)
 50 cd04516 TBP_eukaryotes eukaryo  28.9      44 0.00096   27.2   2.2   34  346-379    29-62  (174)
 51 PHA03162 hypothetical protein;  28.9      49  0.0011   25.1   2.1   26  371-396     2-27  (135)
 52 PF15300 INT_SG_DDX_CT_C:  INTS  27.7      29 0.00062   22.9   0.7   15  285-299    39-53  (65)
 53 PRK05933 type III secretion sy  26.6      61  0.0013   29.1   2.7   43  289-331   317-362 (372)
 54 cd00652 TBP_TLF TATA box bindi  24.6      65  0.0014   26.3   2.4   34  346-379    29-62  (174)
 55 cd08777 Death_RIP1 Death Domai  24.4 2.6E+02  0.0056   19.7   6.1   42   53-97     11-57  (86)
 56 COG1886 FliN Flagellar motor s  24.1      78  0.0017   24.6   2.7   41  291-331    84-126 (136)
 57 smart00549 TAFH TAF homology.   23.2 2.8E+02  0.0062   19.7   6.3   64   84-159     3-66  (92)
 58 PRK00394 transcription factor;  22.2      33 0.00073   28.1   0.3   34  346-379    28-61  (179)
 59 KOG4189 Uncharacterized conser  21.6 4.7E+02    0.01   21.7   7.1   49  222-270   128-178 (209)
 60 PLN00062 TATA-box-binding prot  21.2      32  0.0007   28.2   0.0   55  346-400    29-85  (179)
 61 PF04798 Baculo_19:  Baculoviru  21.1      38 0.00083   26.4   0.4   24  363-387    56-79  (146)
 62 PF11227 DUF3025:  Protein of u  20.4      55  0.0012   27.5   1.2   20  333-352   192-211 (212)
 63 PF14483 Cut8_M:  Cut8 dimerisa  20.1 1.9E+02  0.0042   16.6   3.4   12  254-265    24-35  (38)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.7e-80  Score=577.53  Aligned_cols=421  Identities=44%  Similarity=0.819  Sum_probs=363.0

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCc-ccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA-SVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFR   79 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~   79 (439)
                      |++|+|+.|+|+|+|+++++|++++++..|++||. ......+.+++.+++++.+|+.|+.+||+++..+++.+.+++..
T Consensus        63 ~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~  142 (489)
T KOG0156|consen   63 FTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFM  142 (489)
T ss_pred             EEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhH
Confidence            68999999999999999999999999999999997 33446677778999999899999999999999999999999988


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhh---hcccccccccc
Q 013651           80 PIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNET---LVSFFVPDYFP  156 (439)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P  156 (439)
                      ..-.++++.+++.+.+ ...+++||+...+..++.++|++++||.++... .......+..++.+.   .+.....+++|
T Consensus       143 ~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~~fG~rf~~~-~~~~~~~~~~l~~~~~~~~~~~~~~d~~p  220 (489)
T KOG0156|consen  143 EIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRMLFGRRFEEE-DEEEFLELKELVEESLELLGSFNLSDYFP  220 (489)
T ss_pred             HHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHHHhCCccccC-CchHHHHHHHHHHHHHHHhCCccHHHHhh
Confidence            7778999999999987 222379999999999999999999999999863 112333466666655   45556778888


Q ss_pred             -hhhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHH
Q 013651          157 -LIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVF  235 (439)
Q Consensus       157 -~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~  235 (439)
                       ++.++....+..++.......+..+++..|+++++.. ..++   +.|++|.||+..++++.. .++++++...|.+++
T Consensus       221 ~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~~~~---~~D~vD~lL~~~~~~~~~-~~t~~~i~~~~~dl~  295 (489)
T KOG0156|consen  221 FLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-GDEE---GRDFVDALLKLMKEEKAE-GLTDDHLKALILDLF  295 (489)
T ss_pred             HHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-ccCC---CCcHHHHHHHhhcccccC-CCCHHHHHHHHHHHH
Confidence             5666654445667777777789999999999998875 2111   489999999987755422 299999999999999


Q ss_pred             HccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccce
Q 013651          236 VAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKC  315 (439)
Q Consensus       236 ~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~  315 (439)
                      +||+|||++|+.|++.+|++||++|+|+++||++++|. ++.++.+|+.+||||+|||+|++|+||++|+.+||.+.+|+
T Consensus       296 ~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~-~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~  374 (489)
T KOG0156|consen  296 LAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGK-GRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDT  374 (489)
T ss_pred             hcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCe
Confidence            99999999999999999999999999999999999998 55599999999999999999999999999999999999999


Q ss_pred             eecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHHHHHHHH
Q 013651          316 VIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL  395 (439)
Q Consensus       316 ~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll  395 (439)
                      .++||.|||||.|+++.|++||||++|+||++|+||||++.+ +.+.....++|||.|+|.|||..+|++++.++++.||
T Consensus       375 ~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~ll  453 (489)
T KOG0156|consen  375 KIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLL  453 (489)
T ss_pred             eEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999974 2233567899999999999999999999999999999


Q ss_pred             hhceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          396 YKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      ++|+|+++++    .+++... +.++..+.++.+...+|.
T Consensus       454 q~F~w~~~~~----~~d~~e~-~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  454 QRFDWKLPGG----KVDMEEA-GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             heeeeecCCC----CCCCccc-ccceecCCcceeeeecCC
Confidence            9999999876    2344545 466677778888887775


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.2e-75  Score=538.70  Aligned_cols=416  Identities=25%  Similarity=0.376  Sum_probs=330.9

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCC--cccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRP--ASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKF   78 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~   78 (439)
                      |.++.|.+|.++|+|||.|++|++++-+.|.+|.  .......  ..+...+|+..|++||++|.. ++|.||.++++.|
T Consensus        69 ~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~--~l~~~~Lf~~~g~~WK~lR~~-lsP~Fts~kmk~m  145 (499)
T KOG0158|consen   69 VGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPED--PLSALNLFFLRGERWKRLRTK-LSPTFTSGKLKKM  145 (499)
T ss_pred             EEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCC--cccccCchhccCchHHHHHHh-hccccchhhHHHH
Confidence            3578899999999999999999999999999853  2222111  123456777789999999999 6999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhcccc--------
Q 013651           79 RPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFF--------  150 (439)
Q Consensus        79 ~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  150 (439)
                      .|.+.+.++++++.+.++...+..+++.+.+..+|.|||++++||.+.+...  .....|....+.......        
T Consensus       146 ~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~AfG~~~~s~~--d~~~~F~~~~~~~~~~~~~~~~l~~~  223 (499)
T KOG0158|consen  146 FPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCAFGLDANSLR--DPKAEFRRMGRRAFFLSRGLFPLKFM  223 (499)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhhcccchhhhc--CchHHHHHhhHHHHHHhhccchHhHh
Confidence            9999999999999999875444678999999999999999999999888764  234455544333321100        


Q ss_pred             cccccchhhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhh--CCC-cc-cCCHHH
Q 013651          151 VPDYFPLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKN--CGF-KV-DLTLDH  226 (439)
Q Consensus       151 ~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~--~~~-~~-~l~~~~  226 (439)
                      ....+|.+...  + ...........-+.+.+...++.|....   .   +++|+++.|++.+.+  .+. .. .+|.++
T Consensus       224 ~~~~~p~l~~~--l-~~~~~~~~~~~~~~~~v~~~v~~R~~~~---~---~r~Dfi~lll~~~~~~~~~~~~~~~lt~de  294 (499)
T KOG0158|consen  224 LIFLFPKLALP--L-RVKLFPEDVTDFFRKLVNSRVEQREKEN---I---ERNDFIDLLLDARASDFAKSKSHKALTDDE  294 (499)
T ss_pred             HHHHhHHHHHh--h-hcccChHHHHHHHHHHHHHHHHHHHhcC---C---CCchHHHHHHHhhcccccccccccccCHHH
Confidence            01111211110  0 0111223344445555566666652211   1   278999999998864  111 11 599999


Q ss_pred             HHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCC
Q 013651          227 IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLL  306 (439)
Q Consensus       227 i~~~~~~~~~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~  306 (439)
                      |+++|+.|++||.||||+|+++++|+||+|||+|+|||+||+++..+..+ ++++.+.+|+||++||+||||+||++|. 
T Consensus       295 i~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~-ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-  372 (499)
T KOG0158|consen  295 IAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEG-LTYDSLSKLKYLDMVIKETLRLYPPAPF-  372 (499)
T ss_pred             HHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCC-CCHHHHhCCcHHHHHHHHHHhhCCCccc-
Confidence            99999999999999999999999999999999999999999999765334 9999999999999999999999999999 


Q ss_pred             cccccccceeec-ceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHH
Q 013651          307 IPRETIQKCVID-GYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIA  385 (439)
Q Consensus       307 ~~r~~~~~~~~~-g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~  385 (439)
                      +.|.+++|++++ |+.||||+.|.+++|++||||++||||++|+||||.+.+.+ ...+..|+|||.|+|.|+|++||++
T Consensus       373 ~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~m  451 (499)
T KOG0158|consen  373 LNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALM  451 (499)
T ss_pred             ccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHH
Confidence            789999999999 99999999999999999999999999999999999987644 4467799999999999999999999


Q ss_pred             HHHHHHHHHHhhceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          386 TVDLALANLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       386 e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      |+|+.|+.||++|+++..+ .+. +.......+.++.|+.++++++.+|.
T Consensus       452 q~K~~L~~lL~~f~~~~~~-~t~-~~~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  452 EAKLALAHLLRNFSFEVCP-TTI-IPLEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             HHHHHHHHHHhhCEEecCC-ccc-CcccCCccceeeecCCceEEEEEeCC
Confidence            9999999999999999987 332 22222233777899999999999884


No 3  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.3e-74  Score=558.95  Aligned_cols=429  Identities=51%  Similarity=0.935  Sum_probs=353.3

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |++|+|+.++|+++||+++++|+.++...|.+++.........+.+..+.++..++.|+++||.+..++|+++.+..+.+
T Consensus        65 ~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~  144 (499)
T PLN03234         65 FTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRP  144 (499)
T ss_pred             EEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHH
Confidence            57899999999999999999999988778888876444333333355556667789999999986679999999999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhh---cccccccccch
Q 013651           81 IREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETL---VSFFVPDYFPL  157 (439)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~  157 (439)
                      .+.++++++++.|.+.+++++++|+.+++..+++|+++.++||.+++...  .....+.+.+....   ........+|+
T Consensus       145 ~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~  222 (499)
T PLN03234        145 VREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQAFGKRYNEYG--TEMKRFIDILYETQALLGTLFFSDLFPY  222 (499)
T ss_pred             HHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHHHhCCcccccc--hhHHHHHHHHHHHHHHcCCCcHHHHhhH
Confidence            99999999999998766667889999999999999999999999887531  13344555444432   11223344566


Q ss_pred             hhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHHc
Q 013651          158 IGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVA  237 (439)
Q Consensus       158 l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~A  237 (439)
                      +.++..+.+..++..++.+.+.+++.++|+++++....+.   +..|+++.|++..++++....++++++..++.++++|
T Consensus       223 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~A  299 (499)
T PLN03234        223 FGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPKQ---ETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVP  299 (499)
T ss_pred             HHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC---CcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhc
Confidence            5544333344567788889999999999998765432222   2579999999765443222368999999999999999


Q ss_pred             cccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccceee
Q 013651          238 GADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVI  317 (439)
Q Consensus       238 G~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~  317 (439)
                      |+|||+++++|++|+|++||++|+|+++|+++++++ .+.++++++.+|||++|||+|++|++|+++..++|.+.+|+++
T Consensus       300 G~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~-~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~  378 (499)
T PLN03234        300 GTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGD-KGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKI  378 (499)
T ss_pred             chhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeE
Confidence            999999999999999999999999999999999986 5668999999999999999999999999999778999999999


Q ss_pred             cceeeCCCCEEEeehhhhccCCCCC-CCCCCCCCCcccccccC--CCCCcceeeecCCCCCCCcChhHHHHHHHHHHHHH
Q 013651          318 DGYAIPAKTRVFVNAWAIGRDPEAW-ENPEEFYPERFIDSCID--FKGQHFELIPFGAGRRICPGLNMGIATVDLALANL  394 (439)
Q Consensus       318 ~g~~ip~gt~v~~~~~~~~~d~~~~-~dp~~f~P~Rfl~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~l  394 (439)
                      +|+.|||||.|.+++|++||||++| +||++||||||+++...  .+.....++|||.|+|+|+|++||++|+++++|.|
T Consensus       379 ~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~l  458 (499)
T PLN03234        379 GGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANL  458 (499)
T ss_pred             CCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            9999999999999999999999999 79999999999976432  23346789999999999999999999999999999


Q ss_pred             HhhceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          395 LYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       395 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      +++|+|+++++.++..+.....+|+..+|++.+.+.+++|.
T Consensus       459 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (499)
T PLN03234        459 LYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKHI  499 (499)
T ss_pred             HHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecCC
Confidence            99999999876443445555677888888889999888773


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=2e-73  Score=552.81  Aligned_cols=427  Identities=26%  Similarity=0.512  Sum_probs=334.7

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |++|+|++++|+|+||+++++++.+++..|++||.......+..++.++++..+|+.|+++||++..+++++...+.+.+
T Consensus        96 ~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~  175 (543)
T PLN02971         96 ACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHD  175 (543)
T ss_pred             EEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHH
Confidence            56899999999999999999999998888999875443322222223457777899999999997667888777778889


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcC---CcchhhHHHHHHhhhcc------ccc
Q 013651           81 IREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKA---TSGRSRFHTLLNETLVS------FFV  151 (439)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~------~~~  151 (439)
                      .+.++++.+++.+.+...++.++|+.+.+..++++++++++||.++.....   +.....+.+.+...+..      ...
T Consensus       176 ~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (543)
T PLN02971        176 NRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCI  255 (543)
T ss_pred             HHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcH
Confidence            999999999988876555567899999999999999999999998742110   00111222333332111      122


Q ss_pred             ccccchhhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHH
Q 013651          152 PDYFPLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVL  231 (439)
Q Consensus       152 ~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~  231 (439)
                      ..++|++.+++ ..+..+......+.+.+++...|+++++..+.+.. ....|+++.|++..++++ ...++++++++++
T Consensus       256 ~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~  332 (543)
T PLN02971        256 SDYLPMLTGLD-LNGHEKIMRESSAIMDKYHDPIIDERIKMWREGKR-TQIEDFLDIFISIKDEAG-QPLLTADEIKPTI  332 (543)
T ss_pred             HHhCCchhhhc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CCCcCHHHHHHhhhcccC-CCCCCHHHHHHhH
Confidence            34556554432 11223444556677888888888887653222111 114699999998654322 1249999999999


Q ss_pred             HHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCccccc
Q 013651          232 MNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRET  311 (439)
Q Consensus       232 ~~~~~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~  311 (439)
                      .++++||+|||+++++|++++|+.||++|+|+++||++++|+ ++.++.+++.+|||++|||+|+||+||++|..++|.+
T Consensus       333 ~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~-~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~  411 (543)
T PLN02971        333 KELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGK-ERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVA  411 (543)
T ss_pred             HHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceec
Confidence            999999999999999999999999999999999999999986 5678999999999999999999999999998889999


Q ss_pred             ccceeecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccC--CCCCcceeeecCCCCCCCcChhHHHHHHHH
Q 013651          312 IQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCID--FKGQHFELIPFGAGRRICPGLNMGIATVDL  389 (439)
Q Consensus       312 ~~~~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~  389 (439)
                      .+|++++||.|||||.|.+++|++||||++|+||++|+||||++...+  ....+..++|||.|+|.|+|++||++|+++
T Consensus       412 ~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~  491 (543)
T PLN02971        412 LSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTM  491 (543)
T ss_pred             CCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999975322  122456899999999999999999999999


Q ss_pred             HHHHHHhhceeecCCCCCCCcCccccccCceecccCceeEeeeec
Q 013651          390 ALANLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLS  434 (439)
Q Consensus       390 ~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r  434 (439)
                      ++|.||++|+|+++++.  .++++...++ .+..++.+.+.+++|
T Consensus       492 ~la~ll~~f~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~  533 (543)
T PLN02971        492 MLARLLQGFKWKLAGSE--TRVELMESSH-DMFLSKPLVMVGELR  533 (543)
T ss_pred             HHHHHHHhCEEEeCCCC--CCcchhhhcC-cccccccceeeeeec
Confidence            99999999999987654  2455666667 553444888888888


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.8e-72  Score=544.48  Aligned_cols=430  Identities=36%  Similarity=0.718  Sum_probs=347.8

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |++|+|++++|+++||+++++++.++...|.+++.......+...+.+++++.+|+.|+++||.+..++|+.+.++.+.+
T Consensus        70 ~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~  149 (517)
T PLN02687         70 FRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRH  149 (517)
T ss_pred             eEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHH
Confidence            57889999999999999999999988788998876544443443456778887899999999995448999999999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhcc---cccccccch
Q 013651           81 IREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVS---FFVPDYFPL  157 (439)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~P~  157 (439)
                      .+.++++++++.|.+.. +++++|+.+++..+++|+++.++||.++...........+.+.+..+...   ......+|+
T Consensus       150 ~i~~~~~~l~~~l~~~~-~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~  228 (517)
T PLN02687        150 VREEEVALLVRELARQH-GTAPVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPA  228 (517)
T ss_pred             HHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhh
Confidence            99999999999997643 45689999999999999999999999876432222345566666655321   112245665


Q ss_pred             hhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhC---CCcccCCHHHHHHHHHHH
Q 013651          158 IGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNC---GFKVDLTLDHIKAVLMNV  234 (439)
Q Consensus       158 l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~---~~~~~l~~~~i~~~~~~~  234 (439)
                      +.++.. .+..++..+..+.+.+++..+|+++++....++.  ...|+++.|++...+.   +.+..++++++++++..+
T Consensus       229 l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~--~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~  305 (517)
T PLN02687        229 LRWLDL-QGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGSE--EHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNL  305 (517)
T ss_pred             HHHhCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCc--ccccHHHHHHHhhccccccccccCCCHHHHHHHHHHH
Confidence            544321 1223455667778888999999988765432111  2579999999875432   112369999999999999


Q ss_pred             HHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccc
Q 013651          235 FVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQK  314 (439)
Q Consensus       235 ~~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~  314 (439)
                      ++||+|||+++++|++|+|++||++|+|+++|++++++. .+.++.+++.+||||+|||+|++|+||+++..++|.+.+|
T Consensus       306 ~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d  384 (517)
T PLN02687        306 FTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGR-DRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEE  384 (517)
T ss_pred             hccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC-CCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCC
Confidence            999999999999999999999999999999999999886 5668999999999999999999999999998789999999


Q ss_pred             eeecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccC----CCCCcceeeecCCCCCCCcChhHHHHHHHHH
Q 013651          315 CVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCID----FKGQHFELIPFGAGRRICPGLNMGIATVDLA  390 (439)
Q Consensus       315 ~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~----~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~  390 (439)
                      ++++|+.|||||.|.++.|++||||++|+||++|+||||++.+..    .......++|||.|+|.|+|++||++|++++
T Consensus       385 ~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~  464 (517)
T PLN02687        385 CEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLL  464 (517)
T ss_pred             eeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHH
Confidence            999999999999999999999999999999999999999975321    1223568999999999999999999999999


Q ss_pred             HHHHHhhceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          391 LANLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       391 l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      +|.|+++|+|++.++...++++....+++.+.+..++++++++|-
T Consensus       465 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        465 TATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             HHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCC
Confidence            999999999999876433334444455666777778999999883


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.6e-72  Score=540.23  Aligned_cols=425  Identities=34%  Similarity=0.678  Sum_probs=343.5

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |++|+|++++|+|+||++++++++++...|++++..........++.+.+++.+|+.|+++||.+..++|+.+.++.+.+
T Consensus        67 ~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~  146 (504)
T PLN00110         67 MFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQ  146 (504)
T ss_pred             EEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhH
Confidence            57899999999999999999999988888998876543332333345567777899999999996446899999999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhc---ccccccccch
Q 013651           81 IREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLV---SFFVPDYFPL  157 (439)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~  157 (439)
                      .+.++++.+++.+.+...+|+++|+.+++..+++|+++.++||.++... .......+.+.+.....   ...+..++|+
T Consensus       147 ~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  225 (504)
T PLN00110        147 VRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVILSRRVFET-KGSESNEFKDMVVELMTTAGYFNIGDFIPS  225 (504)
T ss_pred             HHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHHhCCccccc-CchhHHHHHHHHHHHHHHhccccHHHHcch
Confidence            9999999999999876556778999999999999999999999987211 11233556666665522   1222345665


Q ss_pred             hhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHHc
Q 013651          158 IGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVA  237 (439)
Q Consensus       158 l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~A  237 (439)
                      +.++.. .+..++..+..+.+.+++...++++++....+..   ..|+++.+++...+.+ +..++++++..++..+++|
T Consensus       226 l~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~A  300 (504)
T PLN00110        226 IAWMDI-QGIERGMKHLHKKFDKLLTRMIEEHTASAHERKG---NPDFLDVVMANQENST-GEKLTLTNIKALLLNLFTA  300 (504)
T ss_pred             HhhhCc-chHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc---CCChhhHHhhcccccC-CCCCCHHHHHHHHHhhhcc
Confidence            544321 1233455566777888888888877654322112   4699999997643321 2369999999999999999


Q ss_pred             cccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccceee
Q 013651          238 GADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVI  317 (439)
Q Consensus       238 G~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~  317 (439)
                      |+|||+++++|++++|+.||++|+|+++|+++++++ .+.++.+++++|||++|||+|++|+||+++..++|.+.+|+++
T Consensus       301 g~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~  379 (504)
T PLN00110        301 GTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGR-NRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEV  379 (504)
T ss_pred             cccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeee
Confidence            999999999999999999999999999999999986 5568999999999999999999999999998789999999999


Q ss_pred             cceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCC---CCCcceeeecCCCCCCCcChhHHHHHHHHHHHHH
Q 013651          318 DGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDF---KGQHFELIPFGAGRRICPGLNMGIATVDLALANL  394 (439)
Q Consensus       318 ~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~---~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~l  394 (439)
                      +||.|||||.|.++.|++||||++|+||++|+||||++.+...   +.....++|||.|+|.|+|++||++|+++++|.|
T Consensus       380 ~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~l  459 (504)
T PLN00110        380 NGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTL  459 (504)
T ss_pred             CCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999653211   1123579999999999999999999999999999


Q ss_pred             HhhceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          395 LYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       395 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      +++|+|++.++.   ++.....+++++.|+.++++++++|.
T Consensus       460 l~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        460 VHSFDWKLPDGV---ELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             HHhceeecCCCC---ccCcccccccccccCCCceEeeccCC
Confidence            999999987653   23333456778888889999999884


No 7  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=3.9e-72  Score=540.67  Aligned_cols=428  Identities=45%  Similarity=0.865  Sum_probs=332.4

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |++|+|++++|+|+||+++++|+.+++..|.+++..........+..++.+..+|+.|+.+|+.++.++|+.+.+..+.+
T Consensus        66 ~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~  145 (502)
T PLN02966         66 LSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKH  145 (502)
T ss_pred             EEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            46799999999999999999999987777876654332222222223344556799999999997789999999999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhh---cccccccccch
Q 013651           81 IREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETL---VSFFVPDYFPL  157 (439)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~  157 (439)
                      .+.++++++++.|.+....++++|+.+++..+++|+++.++||.+++...  .....+.+++....   .......++|+
T Consensus       146 ~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~  223 (502)
T PLN02966        146 VREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKKYNEDG--EEMKRFIKILYGTQSVLGKIFFSDFFPY  223 (502)
T ss_pred             HHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHHHhCCccCccc--hHHHHHHHHHHHHHHHhCcccHHHhhch
Confidence            99999999999998765556789999999999999999999999887532  12334444444332   11122344554


Q ss_pred             hhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHHc
Q 013651          158 IGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVA  237 (439)
Q Consensus       158 l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~A  237 (439)
                      +.++..+.+..+......+...+++...++++.+.......   ..|+++.|++..+++..+..++++++.+++.++++|
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~A  300 (502)
T PLN02966        224 CGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVKPE---TESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVA  300 (502)
T ss_pred             hhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccccc---cccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhc
Confidence            33222122222333445556667777777765443211111   468999999876543212359999999999999999


Q ss_pred             cccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC-CCCCCccccCCChhHHHHHHHhhccCCCCCCCccccccccee
Q 013651          238 GADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGN-KGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCV  316 (439)
Q Consensus       238 G~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~  316 (439)
                      |+|||+++++|++|+|++||++|+|+++||+++++.. ...++.+++++||||+|||+|+||+||++|..++|.+.+|++
T Consensus       301 G~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~  380 (502)
T PLN02966        301 GTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTK  380 (502)
T ss_pred             cccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCee
Confidence            9999999999999999999999999999999998742 235789999999999999999999999999877899999999


Q ss_pred             ecceeeCCCCEEEeehhhhccCCCCC-CCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHHHHHHHH
Q 013651          317 IDGYAIPAKTRVFVNAWAIGRDPEAW-ENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL  395 (439)
Q Consensus       317 ~~g~~ip~gt~v~~~~~~~~~d~~~~-~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll  395 (439)
                      ++||.|||||.|.+++|++||||++| +||++|+||||+++..........++|||.|+|+|+|++||++|+++++|.||
T Consensus       381 l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll  460 (502)
T PLN02966        381 IAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLL  460 (502)
T ss_pred             EccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999 99999999999976433223456899999999999999999999999999999


Q ss_pred             hhceeecCCCCCCCcCccccccCceecccCceeEeeee
Q 013651          396 YKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKL  433 (439)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  433 (439)
                      ++|+|++.++...+.++....+|+...++..+++..++
T Consensus       461 ~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (502)
T PLN02966        461 LNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPEK  498 (502)
T ss_pred             HhceeeCCCCCCcccCCcccccCeeeccCCCeEEEEEe
Confidence            99999998875444555556667766555466554443


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2.7e-72  Score=543.10  Aligned_cols=423  Identities=39%  Similarity=0.789  Sum_probs=336.6

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |++++|++++|+|+||+++++|+.+++..|+.++...........+.++++..+|+.|+++||+++.++|+.+.++.+.+
T Consensus        72 ~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~  151 (516)
T PLN02183         72 FHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWAS  151 (516)
T ss_pred             eEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            57899999999999999999999988888888875443333332234567777899999999986678999999998888


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhh---cccccccccch
Q 013651           81 IREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETL---VSFFVPDYFPL  157 (439)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~  157 (439)
                      ++ ++++.+++.|..  ..|+++|+.+++..+++|++++++||.+.+.     ....+.+.+..+.   ........+|+
T Consensus       152 ~~-~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~vi~~~~fG~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~  223 (516)
T PLN02183        152 VR-DEVDSMVRSVSS--NIGKPVNIGELIFTLTRNITYRAAFGSSSNE-----GQDEFIKILQEFSKLFGAFNVADFIPW  223 (516)
T ss_pred             HH-HHHHHHHHHHHh--cCCCcEeHHHHHHHHHHHHHHhHhhcCcccc-----hHHHHHHHHHHHHHHhCCccHHHhcch
Confidence            65 789999999965  2467899999999999999999999987653     3345555555442   22233455666


Q ss_pred             hhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccc----cccccCCHHHHHHHHHhhCC---------CcccCCH
Q 013651          158 IGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKS----ELAQQEDIIDVLLQIRKNCG---------FKVDLTL  224 (439)
Q Consensus       158 l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~dll~~ll~~~~~~~---------~~~~l~~  224 (439)
                      +.++.. ....++..+..+.+.+++...|+++++....+.    ......|+++.++++.....         ....+++
T Consensus       224 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~  302 (516)
T PLN02183        224 LGWIDP-QGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTR  302 (516)
T ss_pred             hHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCH
Confidence            554321 123455666777788888888877654322110    00124689999998653211         1125899


Q ss_pred             HHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCC
Q 013651          225 DHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVP  304 (439)
Q Consensus       225 ~~i~~~~~~~~~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~  304 (439)
                      +++..++.++++||+|||+.+++|++|+|++||++|+|+++|+++++|. .+.++.+++.+||||+|||+|++|+||++|
T Consensus       303 ~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~-~~~~~~~~l~~L~yl~avi~EtlRl~p~~p  381 (516)
T PLN02183        303 DNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGL-NRRVEESDLEKLTYLKCTLKETLRLHPPIP  381 (516)
T ss_pred             HHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC-CCCCCHHHhccChHHHHHHHHHhccCCCcc
Confidence            9999999999999999999999999999999999999999999999985 456899999999999999999999999999


Q ss_pred             CCcccccccceeecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccC-CCCCcceeeecCCCCCCCcChhHH
Q 013651          305 LLIPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCID-FKGQHFELIPFGAGRRICPGLNMG  383 (439)
Q Consensus       305 ~~~~r~~~~~~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~-~~~~~~~~~~Fg~G~r~C~G~~lA  383 (439)
                      +. .|.+.+|++++|+.|||||.|.++.|++||||++|+||++|+||||++++.. .......++|||.|+|+|+|++||
T Consensus       382 ~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA  460 (516)
T PLN02183        382 LL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLG  460 (516)
T ss_pred             ce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHH
Confidence            95 5999999999999999999999999999999999999999999999975432 223456899999999999999999


Q ss_pred             HHHHHHHHHHHHhhceeecCCCCCCCcCccccccCceecccCceeEeeeec
Q 013651          384 IATVDLALANLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLS  434 (439)
Q Consensus       384 ~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r  434 (439)
                      ++|+++++|.|+++|+|++.++....+++....++.+.++.+.+.+.+++|
T Consensus       461 ~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        461 LYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             HHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeecC
Confidence            999999999999999999887643333444455666665566888888887


No 9  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=2.9e-71  Score=537.08  Aligned_cols=432  Identities=33%  Similarity=0.630  Sum_probs=343.0

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |++++|++++|+++||+++++|+.++...|++++.........++...+++..+|+.|+.+||.+..++|+.+.++.+.+
T Consensus        68 ~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~  147 (514)
T PLN03112         68 VYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAK  147 (514)
T ss_pred             EEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhH
Confidence            46799999999999999999999988888888775433222222223455667899999999997678999999999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcC-C-cchhhHHHHHHhhhcc---ccccccc
Q 013651           81 IREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKA-T-SGRSRFHTLLNETLVS---FFVPDYF  155 (439)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~-~-~~~~~~~~~~~~~~~~---~~~~~~~  155 (439)
                      .+.++++.+++.+.+....++++|+.+++..+++++++.++||.++..... . .....+..++..+...   .....++
T Consensus       148 ~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (514)
T PLN03112        148 HRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYL  227 (514)
T ss_pred             HHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhC
Confidence            999999999998876544567899999999999999999999998753211 1 1234555655554221   2233445


Q ss_pred             chhhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHH
Q 013651          156 PLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVF  235 (439)
Q Consensus       156 P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~  235 (439)
                      |++.++.. .+..++..++.+.+.+++...++++++..+.+.......|+++.|+++..+++ +..++++++.+++..++
T Consensus       228 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~  305 (514)
T PLN03112        228 PAWRWLDP-YGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMI  305 (514)
T ss_pred             hHHHhcCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHh
Confidence            65544321 12335556677778888888888776543221111124699999998654332 23589999999999999


Q ss_pred             HccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccce
Q 013651          236 VAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKC  315 (439)
Q Consensus       236 ~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~  315 (439)
                      +||+|||+++++|++|+|++||++|+|+++||++++++ .+.++.+++++|||++|||+|++|+||+++..++|.+.+|+
T Consensus       306 ~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~-~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~  384 (514)
T PLN03112        306 AAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGR-NRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRAT  384 (514)
T ss_pred             ccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCC-CCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCe
Confidence            99999999999999999999999999999999999986 55689999999999999999999999999987789999999


Q ss_pred             eecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccC---C-CCCcceeeecCCCCCCCcChhHHHHHHHHHH
Q 013651          316 VIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCID---F-KGQHFELIPFGAGRRICPGLNMGIATVDLAL  391 (439)
Q Consensus       316 ~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~---~-~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l  391 (439)
                      +++|+.|||||.|.+++|++||||++|+||++|+||||.++...   . ......++|||.|+|.|||++||++|+++++
T Consensus       385 ~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~l  464 (514)
T PLN03112        385 TINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMAL  464 (514)
T ss_pred             eEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998764211   1 1234579999999999999999999999999


Q ss_pred             HHHHhhceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          392 ANLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       392 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      +.||++|+|+++++....++.....+++.+++++++.++++||-
T Consensus       465 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        465 ARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             HHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCC
Confidence            99999999998765433344454556777777889999999984


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=5.9e-71  Score=534.21  Aligned_cols=426  Identities=26%  Similarity=0.419  Sum_probs=333.2

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccc-cCCCChhHHHHHHhHhhhcCChhHHhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLA-FSPYYEYWREIRKICVIHLFNSNRAKKFR   79 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~   79 (439)
                      |++++|+.++|+|+||++++++++++...|+++|.......+. .+.+++ +..+|+.|+++||.+++++|+.++++.+.
T Consensus        74 ~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~~~~-~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~  152 (519)
T PLN00168         74 VSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASSRLLG-ESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFA  152 (519)
T ss_pred             EEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccchhhhc-cCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHH
Confidence            5789999999999999999999998888898887644332222 122233 33679999999986689999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhh----hccccccccc
Q 013651           80 PIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNET----LVSFFVPDYF  155 (439)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  155 (439)
                      +.+.++++.+++.|.+....+..+|+.+.+..++.++++.++||.+++..    ....+.......    .....+..++
T Consensus       153 ~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~~~~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (519)
T PLN00168        153 PARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLVLMCFGERLDEP----AVRAIAAAQRDWLLYVSKKMSVFAFF  228 (519)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHcCCCcChh----hHHHHHHHHHHHHHHhcCCCCHHHhC
Confidence            99999999999999875544557899999999999999999999987631    222333333322    1122233455


Q ss_pred             chhhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcc---cc-cc----cccCCHHHHHHHHHhhCCCcccCCHHHH
Q 013651          156 PLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRT---KS-EL----AQQEDIIDVLLQIRKNCGFKVDLTLDHI  227 (439)
Q Consensus       156 P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~-~~----~~~~dll~~ll~~~~~~~~~~~l~~~~i  227 (439)
                      |++.+.. ..+..++..++.+.+.+++...|+++++....   ++ ..    ....|+++.|++....+..+..++++++
T Consensus       229 p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i  307 (519)
T PLN00168        229 PAVTKHL-FRGRLQKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEI  307 (519)
T ss_pred             cchhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHH
Confidence            6443211 01223445567778888888888877654210   00 00    0145899999976532221236999999


Q ss_pred             HHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCc
Q 013651          228 KAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLI  307 (439)
Q Consensus       228 ~~~~~~~~~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~  307 (439)
                      +.++.++++||+|||+++++|++++|++||++|+|+++||+++++++.+.++.+++++||||+|||+|++|+||+++..+
T Consensus       308 ~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~  387 (519)
T PLN00168        308 VNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVL  387 (519)
T ss_pred             HHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccC
Confidence            99999999999999999999999999999999999999999999753456899999999999999999999999999888


Q ss_pred             ccccccceeecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccC-----CCCCcceeeecCCCCCCCcChhH
Q 013651          308 PRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCID-----FKGQHFELIPFGAGRRICPGLNM  382 (439)
Q Consensus       308 ~r~~~~~~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~l  382 (439)
                      +|.+.+|++++||.|||||.|.++++++||||++|+||++|+||||++....     .......++|||.|+|+|||++|
T Consensus       388 ~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~l  467 (519)
T PLN00168        388 PHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGI  467 (519)
T ss_pred             CccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHH
Confidence            9999999999999999999999999999999999999999999999974211     11234579999999999999999


Q ss_pred             HHHHHHHHHHHHHhhceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          383 GIATVDLALANLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       383 A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      |++|++++++.||++|+|+++++..   ++.....+.+..++.++++++++|.
T Consensus       468 A~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~R~  517 (519)
T PLN00168        468 AMLHLEYFVANMVREFEWKEVPGDE---VDFAEKREFTTVMAKPLRARLVPRR  517 (519)
T ss_pred             HHHHHHHHHHHHHHHccceeCCCCc---CChhhhceeEEeecCCcEEEEEecc
Confidence            9999999999999999999876532   2222233455666668999999885


No 11 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.7e-71  Score=530.09  Aligned_cols=418  Identities=25%  Similarity=0.436  Sum_probs=336.3

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCccc-chhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASV-AQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFR   79 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~   79 (439)
                      |..|+|+.++|+++||+.+++|+.++...+.+.+.+. ....+.  |++++++. |+.|+.+||+ +.++|+...++.+.
T Consensus        74 ~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~~~~l--G~gll~~~-g~~W~~~Rk~-~~~~f~~~~L~~~~  149 (497)
T KOG0157|consen   74 FKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESLKPWL--GDGLLFSD-GEKWHKHRKL-LTPAFHFEILKSFV  149 (497)
T ss_pred             hhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHHHHHh--cCccccCC-chHHHHHHhh-ccHhhhHHHHHHHH
Confidence            5689999999999999999999975555555444444 333333  77888887 9999999998 68999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhcccccccccc-hh
Q 013651           80 PIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFP-LI  158 (439)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l  158 (439)
                      +.+.+.+..++..+..... +..+|+.++++++++|++|..+||..... .......++.+++.........+...| +.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~tld~i~~~~~G~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~  227 (497)
T KOG0157|consen  150 PVFIESSLILLLLLELAAS-GEEVDLQDLLKRLTLDIICKTAMGPESLD-AEGPELFEYVQAFDDLTELISKRINLPLGT  227 (497)
T ss_pred             HHHHHHHHHHHHHHHHhhc-CCeEcHHHHHHHHHHHHHHHHhcCCcccc-ccCCcccHHHHHHHHHHHHHHHHHcCchhh
Confidence            9988999998888877432 33399999999999999999999922211 122345577777776544444555566 44


Q ss_pred             hhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCccccc--ccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHH
Q 013651          159 GWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSE--LAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFV  236 (439)
Q Consensus       159 ~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~  236 (439)
                      .++..+. ..++..++.+.+.++++++|+++++....++.  .....|+++.+... .+    ..++++++++++.+|++
T Consensus       228 ~~~~~~~-~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~~~~~d~L~~~~~~-~~----~~l~~~~i~d~v~tf~f  301 (497)
T KOG0157|consen  228 KFLYGLK-SERKLKKARKILHDFLEKIIRERREELEKEGSGEEKKRLDFLDTLLLE-ED----KPLTDEDIRDEVDTFMF  301 (497)
T ss_pred             hHHhhcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHh-cc----CCCCHHHHHHHHHHhee
Confidence            4443332 56788899999999999999999875432111  01257888863322 22    27999999999999999


Q ss_pred             ccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCccccccccee
Q 013651          237 AGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCV  316 (439)
Q Consensus       237 AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~  316 (439)
                      ||+|||+.+++|++++|+.||++|+|+++|+.+++|+..........++|+||++||+||||+|||+|. +.|.+.+|++
T Consensus       302 aG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~  380 (497)
T KOG0157|consen  302 AGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVK  380 (497)
T ss_pred             eccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeE
Confidence            999999999999999999999999999999999998533322333333699999999999999999999 5799999999


Q ss_pred             e-cceeeCCCCEEEeehhhhccCCCCCC-CCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHHHHHHH
Q 013651          317 I-DGYAIPAKTRVFVNAWAIGRDPEAWE-NPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANL  394 (439)
Q Consensus       317 ~-~g~~ip~gt~v~~~~~~~~~d~~~~~-dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~l  394 (439)
                      + +||.||||+.|.++++++||||++|+ ||++||||||+++......++++|+|||+|+|.|+|++||++|||++++.|
T Consensus       381 l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~l  460 (497)
T KOG0157|consen  381 LPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHL  460 (497)
T ss_pred             cCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHH
Confidence            9 58999999999999999999999996 999999999997643334557899999999999999999999999999999


Q ss_pred             HhhceeecCCCCCCCcCccccccCceecccCceeEeeeeccc
Q 013651          395 LYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSIM  436 (439)
Q Consensus       395 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~  436 (439)
                      +++|+|++..+..     ....+.++++|+++++|++++|..
T Consensus       461 l~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  461 LRRFRIEPVGGDK-----PKPVPELTLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             HHheEEEecCCCC-----ceeeeEEEEEecCCeEEEEEeCCC
Confidence            9999999887631     345678889999999999999863


No 12 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=7e-71  Score=529.19  Aligned_cols=416  Identities=17%  Similarity=0.344  Sum_probs=320.2

Q ss_pred             eecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhh--hh
Q 013651            3 LRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKF--RP   80 (439)
Q Consensus         3 ~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~--~~   80 (439)
                      +|+|+.++|+|+||+++++|+.++...|++++......  ...|.+++++ +|+.|+.+||+ +++.|+.+.+..+  .+
T Consensus        75 ~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~--~~~g~gl~~~-~g~~Wr~~Rk~-l~p~F~~~~~~~~~~~~  150 (500)
T PLN02169         75 PWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKIF--DVLGEGILTV-DFELWEDLRKS-NHALFHNQDFIELSLSS  150 (500)
T ss_pred             eccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHHH--HhhcCccccc-CcHHHHHHHHH-HHHHhhhHHHHHHHHHH
Confidence            67899999999999999999998766677654322222  2236666666 49999999999 5899998877643  46


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhcccccccccchhhh
Q 013651           81 IREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGW  160 (439)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~  160 (439)
                      .+.+.++.+++.+.+.+.++.++|+.+.+..+++|++++++||.+.+..+.......+.+++...........+.|++.+
T Consensus       151 ~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  230 (500)
T PLN02169        151 NKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILW  230 (500)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHH
Confidence            77788888999887655567789999999999999999999999876432221223555554433221222223443221


Q ss_pred             -h-hhH-hhhHHHHHHHHHHHHHHHHHHHHhhcCCCccc-ccccccCCHHHHHHHHHhhCC-CcccCCHHHHHHHHHHHH
Q 013651          161 -I-DKL-TGMMQRLQNSFQELDRFYQELMDEHLDPNRTK-SELAQQEDIIDVLLQIRKNCG-FKVDLTLDHIKAVLMNVF  235 (439)
Q Consensus       161 -l-~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~dll~~ll~~~~~~~-~~~~l~~~~i~~~~~~~~  235 (439)
                       + .++ .+..++..++.+.+.+++..+|+++++..... +..+...|+++.+++...... ....++++++.+++.+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l  310 (500)
T PLN02169        231 RLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLV  310 (500)
T ss_pred             HHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHH
Confidence             1 111 13346677888899999999998886542111 110113689999997643211 012478999999999999


Q ss_pred             HccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccc-
Q 013651          236 VAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQK-  314 (439)
Q Consensus       236 ~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~-  314 (439)
                      +||+|||+++++|++|+|+.||++|+|+++||++++       +.+++.+||||+|||+|+||+||++|... |.+.+| 
T Consensus       311 ~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~-------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~  382 (500)
T PLN02169        311 LAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF-------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPD  382 (500)
T ss_pred             HhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC-------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCC
Confidence            999999999999999999999999999999998764       56889999999999999999999999965 666665 


Q ss_pred             eeecceeeCCCCEEEeehhhhccCCCCC-CCCCCCCCCcccccccCCC-CCcceeeecCCCCCCCcChhHHHHHHHHHHH
Q 013651          315 CVIDGYAIPAKTRVFVNAWAIGRDPEAW-ENPEEFYPERFIDSCIDFK-GQHFELIPFGAGRRICPGLNMGIATVDLALA  392 (439)
Q Consensus       315 ~~~~g~~ip~gt~v~~~~~~~~~d~~~~-~dp~~f~P~Rfl~~~~~~~-~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~  392 (439)
                      +.++|+.|||||.|.+++|++||||++| +||++|+||||++.+.... ..++.|+|||+|+|+|+|++||++|++++++
T Consensus       383 ~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la  462 (500)
T PLN02169        383 VLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVAL  462 (500)
T ss_pred             CccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            4459999999999999999999999999 8999999999997543322 2367899999999999999999999999999


Q ss_pred             HHHhhceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          393 NLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       393 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      .||++|+|+++++.   +  +....++++.|++++++++++|.
T Consensus       463 ~ll~~f~~~~~~~~---~--~~~~~~~~l~~~~gl~l~l~~~~  500 (500)
T PLN02169        463 EIIKNYDFKVIEGH---K--IEAIPSILLRMKHGLKVTVTKKI  500 (500)
T ss_pred             HHHHHCEEEEcCCC---C--cccccceEEecCCCEEEEEEeCC
Confidence            99999999987643   2  23345677889999999999874


No 13 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.8e-70  Score=528.25  Aligned_cols=425  Identities=29%  Similarity=0.531  Sum_probs=323.0

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |++|+|++++|+|+||+++++|+.+++..|.+++....+..+...|.++++..+|+.|+++||.+..++|+.+.++.+.+
T Consensus        67 ~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~  146 (503)
T PLN02394         67 FLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRY  146 (503)
T ss_pred             EEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhH
Confidence            46899999999999999999999987777887765444444433355667777899999999995459999999999999


Q ss_pred             hHHHHHHHHHHHHHHhhc-CCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhh---cc--cccccc
Q 013651           81 IREDEVSRMMEKISKSVA-ASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETL---VS--FFVPDY  154 (439)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~  154 (439)
                      .++++++++++.|.+... .++.+++..++..+++|++++++||.+++.... .....+........   ..  .....+
T Consensus       147 ~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (503)
T PLN02394        147 GWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYRMMFDRRFESEDD-PLFLKLKALNGERSRLAQSFEYNYGDF  225 (503)
T ss_pred             HHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHHHHhCCCcccccc-hhHHHHHHHHHHHHHHhcccccchhhh
Confidence            999999999999986532 245699999999999999999999999875321 11112222222111   10  112233


Q ss_pred             cchhhhhhhHhhhHHHHHHHHHHHHH-HHHHHHHhhcCCCccc-ccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHH
Q 013651          155 FPLIGWIDKLTGMMQRLQNSFQELDR-FYQELMDEHLDPNRTK-SELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLM  232 (439)
Q Consensus       155 ~P~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~  232 (439)
                      +|++.+..  ....+..........+ +....++++++..+.. ...+...|+++.|+++..++    .++++++..++.
T Consensus       226 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~----~l~~~~i~~~~~  299 (503)
T PLN02394        226 IPILRPFL--RGYLKICQDVKERRLALFKDYFVDERKKLMSAKGMDKEGLKCAIDHILEAQKKG----EINEDNVLYIVE  299 (503)
T ss_pred             chHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhhhHHHHHHhccccC----CCCHHHHHHHHH
Confidence            44433210  1111112222222222 2333455554321110 01112479999999875432    589999999999


Q ss_pred             HHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccc
Q 013651          233 NVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETI  312 (439)
Q Consensus       233 ~~~~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~  312 (439)
                      ++++||+|||+++++|++|+|++||++|+||++||+++++. ++.++.+++++||||+|||+|++|++|++|..++|.+.
T Consensus       300 ~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~-~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~  378 (503)
T PLN02394        300 NINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGP-GNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNL  378 (503)
T ss_pred             HHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC-CCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecC
Confidence            99999999999999999999999999999999999999986 45678999999999999999999999999998889999


Q ss_pred             cceeecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccC--CCCCcceeeecCCCCCCCcChhHHHHHHHHH
Q 013651          313 QKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCID--FKGQHFELIPFGAGRRICPGLNMGIATVDLA  390 (439)
Q Consensus       313 ~~~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~  390 (439)
                      +|++++||.|||||.|.+++|++||||++|+||++|+||||++.+..  .+.....++|||.|+|+|+|++||++|++++
T Consensus       379 ~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~  458 (503)
T PLN02394        379 EDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIV  458 (503)
T ss_pred             CCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999975421  1224568999999999999999999999999


Q ss_pred             HHHHHhhceeecCCCCCCCcCccccccC-ceecccCceeEeeeecc
Q 013651          391 LANLLYKFDWEMPLGIKSHDLDFDVLLG-IAMHKKNALSLLPKLSI  435 (439)
Q Consensus       391 l~~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~r~  435 (439)
                      +|.|+++|+|++.++.+  +++....+| ..+..+.++++++.+|.
T Consensus       459 la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        459 LGRLVQNFELLPPPGQS--KIDVSEKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             HHHHHHHceeEeCCCCC--cCccccccCceeeccCCCceEEeecCC
Confidence            99999999999877642  244444453 45544449999999985


No 14 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=4.5e-70  Score=525.00  Aligned_cols=412  Identities=22%  Similarity=0.380  Sum_probs=322.9

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |++++|+.+.|+++||+++++|+.++.+.|.+++......... .|.++++ .+|+.|+++|++ +.+.|+.+.++.+.+
T Consensus        65 ~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~-~~~~l~~-~~g~~w~~~Rk~-~~~~f~~~~l~~~~~  141 (482)
T PTZ00404         65 FRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKHGT-FYHGIVT-SSGEYWKRNREI-VGKAMRKTNLKHIYD  141 (482)
T ss_pred             eEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeeeec-cCCceec-cChHHHHHHHHH-HHHHHhhhccccHHH
Confidence            5789999999999999999999998767787776544332211 2555554 469999999999 589999999999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcC--CcchhhHHHHHHhhhcccc---ccccc
Q 013651           81 IREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKA--TSGRSRFHTLLNETLVSFF---VPDYF  155 (439)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~  155 (439)
                      .+.+.++.+++.|.+..+.+..+|+..++..+++|+++.++||.+++..+.  ......+.+.+..++....   ....+
T Consensus       142 ~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (482)
T PTZ00404        142 LLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVI  221 (482)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhh
Confidence            999999999999986554567899999999999999999999998864321  0112445555555432211   11222


Q ss_pred             chhhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHH
Q 013651          156 PLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVF  235 (439)
Q Consensus       156 P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~  235 (439)
                      +++..+.  ........+..+.+.+++.+.++++++..+. .   ...|+++.|+++..+.   ...+.+++++++..++
T Consensus       222 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~---~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~  292 (482)
T PTZ00404        222 EITQPLY--YQYLEHTDKNFKKIKKFIKEKYHEHLKTIDP-E---VPRDLLDLLIKEYGTN---TDDDILSILATILDFF  292 (482)
T ss_pred             hHhhhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-C---CcccHHHHHHHHhccC---CcccHHHHHHHHHHHH
Confidence            2222110  0112233455667778888777766543221 1   1579999999864321   1233445899999999


Q ss_pred             HccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccce
Q 013651          236 VAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKC  315 (439)
Q Consensus       236 ~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~  315 (439)
                      +||+|||+++++|++|+|++||++|+||++||++++++ .+.++.+++++||||+|||+|+||+||++|..++|.+.+|+
T Consensus       293 ~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~-~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~  371 (482)
T PTZ00404        293 LAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNG-RNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDI  371 (482)
T ss_pred             HhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcC-CCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCE
Confidence            99999999999999999999999999999999999986 45679999999999999999999999999986789999999


Q ss_pred             ee-cceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHHHHHHH
Q 013651          316 VI-DGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANL  394 (439)
Q Consensus       316 ~~-~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~l  394 (439)
                      ++ +|+.|||||.|.++.+++||||++|+||++|+||||++..     ....++|||.|+|.|+|++||++|++++++.|
T Consensus       372 ~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~l  446 (482)
T PTZ00404        372 IIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNI  446 (482)
T ss_pred             EecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHH
Confidence            99 9999999999999999999999999999999999999752     34589999999999999999999999999999


Q ss_pred             HhhceeecCCCCCCCcCccccccCceecccCceeEeeeec
Q 013651          395 LYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLS  434 (439)
Q Consensus       395 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r  434 (439)
                      +++|+|+++++.   +.......++++.| .++++++++|
T Consensus       447 l~~f~~~~~~~~---~~~~~~~~~~~~~~-~~~~v~~~~R  482 (482)
T PTZ00404        447 ILNFKLKSIDGK---KIDETEEYGLTLKP-NKFKVLLEKR  482 (482)
T ss_pred             HHhcEEecCCCC---CCCcccccceeecC-CCceeeeecC
Confidence            999999987653   22122234666665 4899999876


No 15 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=7.6e-70  Score=519.94  Aligned_cols=420  Identities=27%  Similarity=0.435  Sum_probs=333.0

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |++++|++++|+|+||+++++|++++...|++++.......+...+..+++..+|+.|+.+||.+..++++...++.+.+
T Consensus        36 ~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~  115 (466)
T PLN02655         36 YTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRD  115 (466)
T ss_pred             EEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHH
Confidence            57899999999999999999999988888888765433333332222344445699999999987788999888889999


Q ss_pred             hHHHHHHHHHHHHHHhhc--CCCceehHHHHHHHHHHHHHHHhcccccccCcCCcch------hhHHHHHHhhhc---cc
Q 013651           81 IREDEVSRMMEKISKSVA--ASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGR------SRFHTLLNETLV---SF  149 (439)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~------~~~~~~~~~~~~---~~  149 (439)
                      .+.+.++.+++.+.+...  .++++|+.+++..+++|+++.++||.+++........      ..+...+..++.   ..
T Consensus       116 ~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (466)
T PLN02655        116 TRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEV  195 (466)
T ss_pred             HHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCc
Confidence            999999999999876543  4568999999999999999999999987753211111      223333333321   12


Q ss_pred             ccccccchhhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHH
Q 013651          150 FVPDYFPLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKA  229 (439)
Q Consensus       150 ~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~  229 (439)
                      .+..++|.+.+++. ....++..+....+.+++..+++++++....+..   ..|+++.|++..      ..++++++.+
T Consensus       196 ~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~d~l~~ll~~~------~~ls~~~i~~  265 (466)
T PLN02655        196 DWRDFFPYLSWIPN-KSFETRVQTTEFRRTAVMKALIKQQKKRIARGEE---RDCYLDFLLSEA------THLTDEQLMM  265 (466)
T ss_pred             chhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC---cccHHHHHHhcc------CCCCHHHHHH
Confidence            23346676555431 1122333333444567777888877655333222   468999999753      2589999999


Q ss_pred             HHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCccc
Q 013651          230 VLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPR  309 (439)
Q Consensus       230 ~~~~~~~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r  309 (439)
                      ++.++++||+|||+++++|++++|+.||++|+|+++||++++++ .. ++.+++++||||+||++|+||++|+++..++|
T Consensus       266 ~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~-~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r  343 (466)
T PLN02655        266 LVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGD-ER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPR  343 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC-CC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCc
Confidence            99999999999999999999999999999999999999999986 33 89999999999999999999999999997789


Q ss_pred             ccccceeecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHH
Q 013651          310 ETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDL  389 (439)
Q Consensus       310 ~~~~~~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~  389 (439)
                      .+.+|++++|+.|||||.|.++.+++||||++|+||++|+|+||++..... .....++|||.|+|.|||++||+.|+++
T Consensus       344 ~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~  422 (466)
T PLN02655        344 FVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYES-ADMYKTMAFGAGKRVCAGSLQAMLIACM  422 (466)
T ss_pred             ccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCccc-CCcccccCCCCCCCCCCcHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999764221 1346899999999999999999999999


Q ss_pred             HHHHHHhhceeecCCCCCCCcCccccccCceecccCceeEeeeecccc
Q 013651          390 ALANLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSIMM  437 (439)
Q Consensus       390 ~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~~  437 (439)
                      +++.||++|+|++.++.. .   .....++++.+++++++++++|..|
T Consensus       423 ~l~~ll~~f~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~r~~~  466 (466)
T PLN02655        423 AIARLVQEFEWRLREGDE-E---KEDTVQLTTQKLHPLHAHLKPRGSM  466 (466)
T ss_pred             HHHHHHHHeEEEeCCCCc-c---ccchhheeEeecCCcEEEEeecCCC
Confidence            999999999999876532 1   1234577788888999999999876


No 16 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.9e-69  Score=521.12  Aligned_cols=427  Identities=22%  Similarity=0.388  Sum_probs=323.0

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhc-CChhHHhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHL-FNSNRAKKFR   79 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~-fs~~~~~~~~   79 (439)
                      |++|+|++++|+|+||+++++++++++..|++|+.......+..++.++++..+|+.|+.+||++ ++. ++......+.
T Consensus        79 ~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l-~~~~~~~~~~~~~~  157 (534)
T PLN03018         79 ACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVI-TTEIMSVKTLNMLE  157 (534)
T ss_pred             EEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhhccCCCceEecCCCHHHHHHHHHH-HHHhcCHHHHHHHH
Confidence            57899999999999999999999988888998876554433332234567776799999999995 565 4555555566


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCc-chhh----HHHHHHhh---hccc--
Q 013651           80 PIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATS-GRSR----FHTLLNET---LVSF--  149 (439)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~-~~~~----~~~~~~~~---~~~~--  149 (439)
                      +.+..+++++++.+.+....+.++|+.+++..+++|++++++||.+++...... ....    +...+...   ....  
T Consensus       158 ~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (534)
T PLN03018        158 AARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPG  237 (534)
T ss_pred             HHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCC
Confidence            666678999999998654455679999999999999999999999875421100 0111    21112211   1110  


Q ss_pred             -ccccccc-hhhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHH
Q 013651          150 -FVPDYFP-LIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHI  227 (439)
Q Consensus       150 -~~~~~~P-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i  227 (439)
                       ...+.+| ++.++. +.+...+.......+.+++..+++++++..+.........|+++.|++...+.+ ...++++++
T Consensus       238 ~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i  315 (534)
T PLN03018        238 FSPVDYVERWLRGWN-IDGQEERAKVNVNLVRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQNG-KYLVTPDEI  315 (534)
T ss_pred             CcHHHHhhhhhhhhc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhcccC-CCCCCHHHH
Confidence             1112222 222110 012233444556677888888888876532211110014699999998654332 114899999


Q ss_pred             HHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCc
Q 013651          228 KAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLI  307 (439)
Q Consensus       228 ~~~~~~~~~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~  307 (439)
                      +.++.++++||+|||+.+++|++|+|+.||++|+|+++||++++++ .+.++.+++.+||||+|||+|++|++|++|...
T Consensus       316 ~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~-~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~  394 (534)
T PLN03018        316 KAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGK-DRLVQESDIPNLNYLKACCRETFRIHPSAHYVP  394 (534)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC-CCCCCHHHhcCCHHHHHHHHHHHhcCCCccccC
Confidence            9999999999999999999999999999999999999999999986 566889999999999999999999999999876


Q ss_pred             ccccccceeecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCC-----CCCcceeeecCCCCCCCcChhH
Q 013651          308 PRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDF-----KGQHFELIPFGAGRRICPGLNM  382 (439)
Q Consensus       308 ~r~~~~~~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~l  382 (439)
                      +|.+.+|++++||.|||||.|.++.|++||||++|+||++|+||||++.+...     ......++|||.|+|.|||++|
T Consensus       395 ~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~l  474 (534)
T PLN03018        395 PHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKV  474 (534)
T ss_pred             CcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHH
Confidence            89999999999999999999999999999999999999999999999754211     1234689999999999999999


Q ss_pred             HHHHHHHHHHHHHhhceeecCCCCCCCcCccccccCceecccCceeEeeeec
Q 013651          383 GIATVDLALANLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLS  434 (439)
Q Consensus       383 A~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r  434 (439)
                      |++|+++++|.|+++|+|++.++.  .++++....+++..| .++++++++|
T Consensus       475 A~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~p-~~~~v~~~~R  523 (534)
T PLN03018        475 GTIMMVMMLARFLQGFNWKLHQDF--GPLSLEEDDASLLMA-KPLLLSVEPR  523 (534)
T ss_pred             HHHHHHHHHHHHHHhceEEeCCCC--CCCCccccccceecC-CCeEEEEEec
Confidence            999999999999999999987653  133333333544444 4899999998


No 17 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=7.7e-70  Score=527.38  Aligned_cols=413  Identities=23%  Similarity=0.369  Sum_probs=325.0

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |.+|+|+.++|+|+||+++++++.++ ..+..++...........|.++++ .+|+.|+++||. +.+.|+.++++.+.+
T Consensus        97 ~~~~~g~~~~vvv~dp~~v~~il~~~-~~~~~r~~~~~~~~~~~~g~~l~~-~~g~~Wk~~Rk~-~~~~f~~~~l~~~~~  173 (516)
T PLN02290         97 FIYWNGTEPRLCLTETELIKELLTKY-NTVTGKSWLQQQGTKHFIGRGLLM-ANGADWYHQRHI-AAPAFMGDRLKGYAG  173 (516)
T ss_pred             EEEccCCccEEEECCHHHHHHHHhcC-CCCCCCcchhhhHHHHHhcCCccc-cCchHHHHHHhh-cccccCHHHHHHHHH
Confidence            47899999999999999999999876 445555532211111112555554 469999999999 589999999999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCC-CceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhh---hcccccccccc
Q 013651           81 IREDEVSRMMEKISKSVAAS-NPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNET---LVSFFVPDYFP  156 (439)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~-~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P  156 (439)
                      .+.++++.+++.|.+..+.+ .++|+.+++..+++|++++++||.+++..      +.+...+..+   .........+|
T Consensus       174 ~i~~~~~~l~~~l~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~p  247 (516)
T PLN02290        174 HMVECTKQMLQSLQKAVESGQTEVEIGEYMTRLTADIISRTEFDSSYEKG------KQIFHLLTVLQRLCAQATRHLCFP  247 (516)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceEEhHHHHHHHHHHHHHHHHcCCccccc------hHHHHHHHHHHHHHHHhhhhhcCc
Confidence            99999999999998765434 47999999999999999999999987531      2222222222   11111122345


Q ss_pred             hhhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhC-CCcccCCHHHHHHHHHHHH
Q 013651          157 LIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNC-GFKVDLTLDHIKAVLMNVF  235 (439)
Q Consensus       157 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~  235 (439)
                      ++.+++.  +..++.......+.+++...|+++++..+.+.......|+++.++++.... +.+..++++++.+++.+++
T Consensus       248 ~~~~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~  325 (516)
T PLN02290        248 GSRFFPS--KYNREIKSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFF  325 (516)
T ss_pred             hhhhCCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHH
Confidence            4433321  223445566778888888888887754332211112479999999864422 1123489999999999999


Q ss_pred             HccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccce
Q 013651          236 VAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKC  315 (439)
Q Consensus       236 ~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~  315 (439)
                      +||+|||+++++|++|+|++||++|+|+++||++++|+ + .++.+++++||||+|||+|++|++|+++. ++|.+.+|+
T Consensus       326 ~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~-~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~  402 (516)
T PLN02290        326 FAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGG-E-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDI  402 (516)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCC-C-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCe
Confidence            99999999999999999999999999999999999986 3 68999999999999999999999999997 789999999


Q ss_pred             eecceeeCCCCEEEeehhhhccCCCCC-CCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHHHHHHH
Q 013651          316 VIDGYAIPAKTRVFVNAWAIGRDPEAW-ENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANL  394 (439)
Q Consensus       316 ~~~g~~ip~gt~v~~~~~~~~~d~~~~-~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~l  394 (439)
                      +++|+.|||||.|.++.|++||||++| +||++|+||||++...   .....++|||.|+|.|+|++||++|++++++.|
T Consensus       403 ~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~l  479 (516)
T PLN02290        403 KLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAML  479 (516)
T ss_pred             eECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999 8999999999995421   123479999999999999999999999999999


Q ss_pred             HhhceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          395 LYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       395 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      +++|+|+++++..     .....+++..|++++++++++|.
T Consensus       480 l~~f~~~~~~~~~-----~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        480 ISKFSFTISDNYR-----HAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             HHhceEeeCCCcc-----cCccceeeecCCCCCeEEEEeCC
Confidence            9999999876531     11123577889999999999874


No 18 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=2.8e-69  Score=525.41  Aligned_cols=413  Identities=22%  Similarity=0.395  Sum_probs=317.6

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |++++|+.++|+|+||+.+++||..+...|.+++.......  ..|.++++ .+|+.|+.+|+. +.++|+.+.+..+++
T Consensus       168 ~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~--~~g~~l~~-~dge~wr~rRr~-l~p~Fs~~~v~~l~~  243 (633)
T PLN02738        168 FRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEF--VMGKGLIP-ADGEIWRVRRRA-IVPALHQKYVAAMIS  243 (633)
T ss_pred             EEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhh--ccCCceec-CCcHHHHHHHHh-ccHhhhHHHHHHHHH
Confidence            46889999999999999999999977666776543222111  12555554 469999999999 689999999999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhc---ccccccc---
Q 013651           81 IREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLV---SFFVPDY---  154 (439)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---  154 (439)
                      .+.++++.+++.|.+....|+++|+...+..+++|+|+.++||.+++....   .+.+...+...+.   ......+   
T Consensus       244 ~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (633)
T PLN02738        244 LFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSN---DTGIVEAVYTVLREAEDRSVSPIPVW  320 (633)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCcccccc---chHHHHHHHHHHHHHHHHhhcchhhh
Confidence            999999999999987666678999999999999999999999999875421   1223333222211   1011111   


Q ss_pred             -cchhhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCC-------CcccccccccCCHHHHHHHHHhhCCCcccCCHHH
Q 013651          155 -FPLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDP-------NRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDH  226 (439)
Q Consensus       155 -~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~  226 (439)
                       +|.+..+   .+..++..+..+.+.+++..+++.+++.       .........+.|+++.|++..      ..+++++
T Consensus       321 ~~p~~~~l---~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~------~~ls~~~  391 (633)
T PLN02738        321 EIPIWKDI---SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG------DDVSSKQ  391 (633)
T ss_pred             hhhHHhhh---chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC------CCCCHHH
Confidence             2222211   1222333444445555555554432211       100000112468999998741      2589999


Q ss_pred             HHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCC
Q 013651          227 IKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLL  306 (439)
Q Consensus       227 i~~~~~~~~~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~  306 (439)
                      +.++++.+++||+|||+.+++|++|+|++||++|+||++|+++++++  ..++++++++||||+|||+|+||+||+++. 
T Consensus       392 L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~--~~~t~edL~kLPYL~AVIkEtLRL~p~~p~-  468 (633)
T PLN02738        392 LRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD--RFPTIEDMKKLKYTTRVINESLRLYPQPPV-  468 (633)
T ss_pred             HHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC--CCCCHHHHccCHHHHHHHHHHHhcCCCccc-
Confidence            99999999999999999999999999999999999999999999874  567999999999999999999999999999 


Q ss_pred             cccccccceeecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCccccccc--CCCCCcceeeecCCCCCCCcChhHHH
Q 013651          307 IPRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCI--DFKGQHFELIPFGAGRRICPGLNMGI  384 (439)
Q Consensus       307 ~~r~~~~~~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~--~~~~~~~~~~~Fg~G~r~C~G~~lA~  384 (439)
                      ++|.+.+|.+++||.|||||.|.++.|.+||||++|+||++|+||||+..+.  ........++|||.|+|.|+|++||+
T Consensus       469 ~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~  548 (633)
T PLN02738        469 LIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFAS  548 (633)
T ss_pred             cceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHH
Confidence            5699999999999999999999999999999999999999999999985421  11234568999999999999999999


Q ss_pred             HHHHHHHHHHHhhceeecCCCCCCCcCccccccCceecccCceeEeeeeccc
Q 013651          385 ATVDLALANLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSIM  436 (439)
Q Consensus       385 ~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~  436 (439)
                      +|++++||.|+++|+|++.++..  ++  ....+.++.|+.++++++++|..
T Consensus       549 ~El~l~LA~Llr~F~~el~~~~~--~~--~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        549 FENVVATAMLVRRFDFQLAPGAP--PV--KMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             HHHHHHHHHHHHhCeeEeCCCCC--Cc--ccccceEEeeCCCcEEEEEECCC
Confidence            99999999999999999887642  22  22345667778899999998853


No 19 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.9e-69  Score=484.83  Aligned_cols=417  Identities=21%  Similarity=0.327  Sum_probs=345.7

Q ss_pred             eee-cCCcceEEEcCHHHHHHHHHHcCccccCCC-cc--cchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhh
Q 013651            2 SLR-LGFSPSLVVSSVKMAKEILKTHGLQFCSRP-AS--VAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKK   77 (439)
Q Consensus         2 ~~~-~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~-~~--~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~   77 (439)
                      ... +|+...|+|.||+.++.+|+.. +.++-|| ..  +....-.+++...+++.+|+.|.+.|..+...+++++.++.
T Consensus        91 ~~~~~G~~~~V~v~~p~d~E~v~r~E-G~~P~Rp~~~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~  169 (519)
T KOG0159|consen   91 REGMLGRVDLVHVYNPDDVEKVFRNE-GKYPFRPLLIEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRR  169 (519)
T ss_pred             eeccCCCCCeEEeeCHHHHHHHHhcC-CCCCCcccccchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHH
Confidence            344 7899999999999999999865 4567675 11  11122233456667777899999999998777899999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhhcC---CCceehHHHHHHHHHHHHHHHhcccccccCcC--CcchhhHHHHHHhhhcccccc
Q 013651           78 FRPIREDEVSRMMEKISKSVAA---SNPVNVSEVMMSLTSTIICRIGFGKRYDEDKA--TSGRSRFHTLLNETLVSFFVP  152 (439)
Q Consensus        78 ~~~~i~~~~~~l~~~l~~~~~~---~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  152 (439)
                      |.|.++..+++++..+....+.   ..+.|+.+.+.+++++.||.++||.+++.++.  ..+.+.|++++..++......
T Consensus       170 yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l  249 (519)
T KOG0159|consen  170 YLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQL  249 (519)
T ss_pred             HhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHH
Confidence            9999999999999999987652   33679999999999999999999999999864  345678888888886655555


Q ss_pred             cccchh-hhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccc-cccCCHHHHHHHHHhhCCCcccCCHHHHHHH
Q 013651          153 DYFPLI-GWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSEL-AQQEDIIDVLLQIRKNCGFKVDLTLDHIKAV  230 (439)
Q Consensus       153 ~~~P~l-~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~  230 (439)
                      .+.|.+ ++++  ++.++++.+++..+.++...+|++..+..+..... .+..+.+..+|..       ..++.+++..+
T Consensus       250 ~~~p~l~r~~~--t~~wk~~~~~~D~i~~~~~~~Id~~l~~l~~~~~~~~~~~~~l~~~L~~-------~~l~~k~~~~~  320 (519)
T KOG0159|consen  250 MLMPSLWRYFP--TKVWKDFVRAWDQIFDVGDKYIDNALEELEKQDSAGSEYTGSLLELLLR-------KELSRKDAKAN  320 (519)
T ss_pred             HhcchHHHhCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH-------ccCCHHHHHHH
Confidence            555543 3443  46788889999999999999888777654331110 0122333333321       26899999999


Q ss_pred             HHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccc
Q 013651          231 LMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRE  310 (439)
Q Consensus       231 ~~~~~~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~  310 (439)
                      +++++.||.|||+.++.|+||+|++||++|++|++|+..++.+....++.+++.++|||.||||||+||||.+|.. .|.
T Consensus       321 ~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~-~R~  399 (519)
T KOG0159|consen  321 VMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN-GRV  399 (519)
T ss_pred             HHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc-ccc
Confidence            9999999999999999999999999999999999999999987556788999999999999999999999999994 699


Q ss_pred             cccceeecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHHH
Q 013651          311 TIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLA  390 (439)
Q Consensus       311 ~~~~~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~  390 (439)
                      ..+|.+++||.|||||.|.+..+.+.+||++|++|.+|+|||||+++. .+.+++.++|||.|+|+|+|+.+|.+|+-++
T Consensus       400 l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~ll  478 (519)
T KOG0159|consen  400 LPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLL  478 (519)
T ss_pred             cchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999863 3557899999999999999999999999999


Q ss_pred             HHHHHhhceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          391 LANLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       391 l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      ||.|+++|+++..++.   +  +...+.+++.|...+.+++++|.
T Consensus       479 Larllr~f~V~~~~~~---p--v~~~~~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  479 LARLLRNFKVEFLHEE---P--VEYVYRFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             HHHHHHhcceeecCCC---C--ccceeEEEEcCCCCcceeeeeCC
Confidence            9999999999987642   2  34456777888889999999885


No 20 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=5.3e-69  Score=521.08  Aligned_cols=424  Identities=22%  Similarity=0.365  Sum_probs=317.7

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |.+++|++++|+++||+++++|+.++...|.+.+....... ...|.++ ++.+|+.|+++||+ +++.|+.+.++.+.+
T Consensus        68 ~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~-~~~g~~l-~~~~g~~w~~~Rr~-l~~~fs~~~l~~~~~  144 (516)
T PLN03195         68 VVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYME-VLLGDGI-FNVDGELWRKQRKT-ASFEFASKNLRDFST  144 (516)
T ss_pred             EEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHH-HHhcCee-eccCcHHHHHHHHh-cchhhhHHHHHHHHH
Confidence            57899999999999999999999876555665432211111 1125554 44579999999999 589999999999998


Q ss_pred             hH-HHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhcccccccccchhh
Q 013651           81 IR-EDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIG  159 (439)
Q Consensus        81 ~i-~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~  159 (439)
                      .+ .+.++.+++.+.+....+.++|+.+++..+++|+++.++||.+++..+.......+.+.+.............|++.
T Consensus       145 ~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  224 (516)
T PLN03195        145 VVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWK  224 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHHhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhh
Confidence            76 66677888877654445678999999999999999999999988764322122345544443321111111112211


Q ss_pred             hhhhH-hhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccc--cccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHH
Q 013651          160 WIDKL-TGMMQRLQNSFQELDRFYQELMDEHLDPNRTKS--ELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFV  236 (439)
Q Consensus       160 ~l~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~  236 (439)
                      ....+ .+..+++.+....+.+++...++++++....+.  ......|+++.|++..+++  +..++++++++++.++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~  302 (516)
T PLN03195        225 LKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKSGKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVI  302 (516)
T ss_pred             HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHH
Confidence            00000 112234455677788888888887765422110  0012569999999754332  236999999999999999


Q ss_pred             ccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC-------------------CCCCCccccCCChhHHHHHHHhh
Q 013651          237 AGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGN-------------------KGFVNEDDVQELHYLKAVVKETM  297 (439)
Q Consensus       237 AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~-------------------~~~~~~~~~~~lp~l~a~i~E~l  297 (439)
                      ||+|||+++++|++|+|++||++|+||++|++++.++.                   .+.++++++.+||||+|||+|+|
T Consensus       303 AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtL  382 (516)
T PLN03195        303 AGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETL  382 (516)
T ss_pred             HhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHh
Confidence            99999999999999999999999999999999986431                   23578899999999999999999


Q ss_pred             ccCCCCCCCcccccccceee-cceeeCCCCEEEeehhhhccCCCCC-CCCCCCCCCcccccccCCCCCcceeeecCCCCC
Q 013651          298 RLQPTVPLLIPRETIQKCVI-DGYAIPAKTRVFVNAWAIGRDPEAW-ENPEEFYPERFIDSCIDFKGQHFELIPFGAGRR  375 (439)
Q Consensus       298 Rl~~~~~~~~~r~~~~~~~~-~g~~ip~gt~v~~~~~~~~~d~~~~-~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r  375 (439)
                      |+||++|.. +|.+.+|..+ +|+.|||||.|.++.|++||||++| +||++|+||||++.+......+..++|||.|+|
T Consensus       383 Rl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R  461 (516)
T PLN03195        383 RLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPR  461 (516)
T ss_pred             hcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCC
Confidence            999999996 5667676555 9999999999999999999999999 999999999999643211224567999999999


Q ss_pred             CCcChhHHHHHHHHHHHHHHhhceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          376 ICPGLNMGIATVDLALANLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       376 ~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      .|+|++||++|+++++|.|+++|++++.++.   ++  ......+..|+.+++|++++|.
T Consensus       462 ~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~---~~--~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        462 ICLGKDSAYLQMKMALALLCRFFKFQLVPGH---PV--KYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             cCcCHHHHHHHHHHHHHHHHHhceeEecCCC---cc--eeeeeeEEecCCCEEEEEEeCC
Confidence            9999999999999999999999999987653   22  2223445678889999999873


No 21 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=6.9e-68  Score=507.66  Aligned_cols=405  Identities=20%  Similarity=0.291  Sum_probs=317.1

Q ss_pred             EEEcCHHHHHHHHHHcCccccCCCccc-chhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhh--hhhHHHHHH
Q 013651           11 LVVSSVKMAKEILKTHGLQFCSRPASV-AQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKF--RPIREDEVS   87 (439)
Q Consensus        11 v~v~dp~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~--~~~i~~~~~   87 (439)
                      |+++||+++++|+.++...|.+..... ....+  .|++++ +.+|+.|+.+||. +++.|+.+.++.+  .+.+.+.++
T Consensus        86 iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~--~g~gi~-~~~g~~wk~~Rk~-l~~~fs~~~l~~~~~~~~~~~~~~  161 (502)
T PLN02426         86 TITANPENVEYMLKTRFDNYPKGKPFSAILGDL--LGRGIF-NVDGDSWRFQRKM-ASLELGSVSIRSYAFEIVASEIES  161 (502)
T ss_pred             EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh--cCCcee-ecCcHHHHHHHHH-hHhhhhhHHHHHHHHHHHHHHHHH
Confidence            899999999999997766677543221 11122  266655 4569999999999 5899999988876  367778888


Q ss_pred             HHHHHHHHhhc--CCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhcc--cccccccchhhhhhh
Q 013651           88 RMMEKISKSVA--ASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVS--FFVPDYFPLIGWIDK  163 (439)
Q Consensus        88 ~l~~~l~~~~~--~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~l~~  163 (439)
                      ++++.|.+..+  ++.++|+.++++.+++|+++.++||.+++..+.......+.+.+......  ......+|++..+..
T Consensus       162 ~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (502)
T PLN02426        162 RLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKR  241 (502)
T ss_pred             HHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Confidence            89888876542  24679999999999999999999999987654322334566555543211  111122233322211


Q ss_pred             -H-hhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHHccccc
Q 013651          164 -L-TGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADT  241 (439)
Q Consensus       164 -~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dt  241 (439)
                       + .+..+++.++.+.+.+++.++|+++++...  +.   ..|+++.+++.        ..+++++.+++.++++||+||
T Consensus       242 ~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~--~~---~~dll~~ll~~--------~~~~~~l~~~~~~~l~AG~dT  308 (502)
T PLN02426        242 LLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF--SA---SKDLLSRFMAS--------INDDKYLRDIVVSFLLAGRDT  308 (502)
T ss_pred             hcccchhHHHHHHHHHHHHHHHHHHHHHHhccc--CC---cchHHHHHHhc--------CCCHHHHHHHHHHHHHhccch
Confidence             1 123456677888899999999998875421  11   57999999974        236789999999999999999


Q ss_pred             hHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccceee-cce
Q 013651          242 SAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVI-DGY  320 (439)
Q Consensus       242 t~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~-~g~  320 (439)
                      |+++++|++|+|++||++|+||++|++++.++..+.++++++++||||+|||+|+||+|||+|.. .|.+.+|.++ +|+
T Consensus       309 ta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~  387 (502)
T PLN02426        309 VASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGT  387 (502)
T ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCc
Confidence            99999999999999999999999999999875344689999999999999999999999999985 5999988777 999


Q ss_pred             eeCCCCEEEeehhhhccCCCCC-CCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHHHHHHHHhhce
Q 013651          321 AIPAKTRVFVNAWAIGRDPEAW-ENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFD  399 (439)
Q Consensus       321 ~ip~gt~v~~~~~~~~~d~~~~-~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~  399 (439)
                      .|||||.|.++.|++||||++| +||++|+||||++++......+..++|||.|+|.|+|++||++|++++++.|+++|+
T Consensus       388 ~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~  467 (502)
T PLN02426        388 FVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFD  467 (502)
T ss_pred             EECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHce
Confidence            9999999999999999999999 999999999999743211224567999999999999999999999999999999999


Q ss_pred             eecCCCCCCCcCccccccCceecccCceeEeeeeccc
Q 013651          400 WEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSIM  436 (439)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~  436 (439)
                      +++.++..  + ......++++.|+++++|++++|..
T Consensus       468 ~~~~~~~~--~-~~~~~~~~~~~~~~gl~v~~~~r~~  501 (502)
T PLN02426        468 IEVVGRSN--R-APRFAPGLTATVRGGLPVRVRERVR  501 (502)
T ss_pred             EEEecCCC--C-CCcccceeEEecCCCEEEEEEEccC
Confidence            99865421  1 1123346778889999999998853


No 22 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=8.4e-68  Score=509.48  Aligned_cols=398  Identities=17%  Similarity=0.321  Sum_probs=305.4

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhh-hh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKK-FR   79 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~-~~   79 (439)
                      |++++|++++|+|+||+++++++.+++..|..+..... .... ++.++++ .+|+.|+.+|+++ .+.|+...++. +.
T Consensus        79 ~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~~-~~~~-g~~~~~~-~~g~~wr~~Rk~~-~~~f~~~~l~~~~~  154 (490)
T PLN02500         79 YRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSI-GGIL-GKWSMLV-LVGDMHRDMRSIS-LNFLSHARLRTHLL  154 (490)
T ss_pred             ccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchHH-HHHh-Ccccccc-cCCHHHHHHHHHH-HHhcChHHHHHHHH
Confidence            56889999999999999999999987776754422111 1122 1234444 4699999999994 78999988877 56


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhccc-ccccccchh
Q 013651           80 PIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSF-FVPDYFPLI  158 (439)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l  158 (439)
                      +.+.+.+..+++.|.    .+..+|+.+.+..+++|++++++||.+.+..    ....+...+..+.... .....+|..
T Consensus       155 ~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~~~vi~~~~fg~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~  226 (490)
T PLN02500        155 KEVERHTLLVLDSWK----ENSTFSAQDEAKKFTFNLMAKHIMSMDPGEE----ETEQLKKEYVTFMKGVVSAPLNFPGT  226 (490)
T ss_pred             HHHHHHHHHHHHHhC----CCCCEEehHHHHHHHHHHHHHHHhCCCCCch----HHHHHHHHHHHHHhhhhcchhcCCCc
Confidence            777788888887774    3557999999999999999999999875431    2223333333321111 111122321


Q ss_pred             hhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHHcc
Q 013651          159 GWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAG  238 (439)
Q Consensus       159 ~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG  238 (439)
                              ..++..++.+.+.+++.+.++++++..+.++......|+++.+++.       ..++++++++++.++++||
T Consensus       227 --------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG  291 (490)
T PLN02500        227 --------AYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAG  291 (490)
T ss_pred             --------ccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhh
Confidence                    1234445667788888888887765432221111246999999873       2589999999999999999


Q ss_pred             ccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC----CCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccc
Q 013651          239 ADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGG----NKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQK  314 (439)
Q Consensus       239 ~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~----~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~  314 (439)
                      +|||+++++|++|+|++||++|+|+++|++++++.    ..+.++++++++|||++|||+|++|+||++|. ++|.+.+|
T Consensus       292 ~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d  370 (490)
T PLN02500        292 HETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKD  370 (490)
T ss_pred             hhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCC
Confidence            99999999999999999999999999999998742    13457899999999999999999999999998 57999999


Q ss_pred             eeecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCC------CCcceeeecCCCCCCCcChhHHHHHHH
Q 013651          315 CVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFK------GQHFELIPFGAGRRICPGLNMGIATVD  388 (439)
Q Consensus       315 ~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~------~~~~~~~~Fg~G~r~C~G~~lA~~e~~  388 (439)
                      ++++||.|||||.|.+++|++||||++|+||++|+||||++++...+      ..+..++|||.|+|.|+|++||++|++
T Consensus       371 ~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~  450 (490)
T PLN02500        371 VRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMA  450 (490)
T ss_pred             ceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHH
Confidence            99999999999999999999999999999999999999997542211      135689999999999999999999999


Q ss_pred             HHHHHHHhhceeecCCCCCCCcCccccccCceecccCceeEeeee
Q 013651          389 LALANLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKL  433 (439)
Q Consensus       389 ~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  433 (439)
                      +++|.|+++|+|++.++..  .  ..  +.....| .++.|++++
T Consensus       451 ~~la~ll~~f~~~~~~~~~--~--~~--~~~~~~~-~~l~~~~~~  488 (490)
T PLN02500        451 VFIHHLVLNFNWELAEADQ--A--FA--FPFVDFP-KGLPIRVRR  488 (490)
T ss_pred             HHHHHHHhccEEEEcCCCc--c--ee--cccccCC-CCceEEEEe
Confidence            9999999999999876532  1  11  1222234 588888764


No 23 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=4.5e-68  Score=512.03  Aligned_cols=396  Identities=32%  Similarity=0.576  Sum_probs=322.8

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhh--hccCCCccccCCCChhHHHHHHhHhhhcCChh-HHhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQK--LSYNGLDLAFSPYYEYWREIRKICVIHLFNSN-RAKK   77 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~-~~~~   77 (439)
                      |++++|++++|+|+||+++++|+..+...|+.++.......  ....+.++++.. |+.|+.+|+. +.+.|+.. .. .
T Consensus        37 ~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~R~~-~~~~~~~~~~~-~  113 (463)
T PF00067_consen   37 FRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRGPFGGKGLFFSD-GERWRRQRRL-LAPAFSSKKIL-K  113 (463)
T ss_dssp             EEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHHHHTTTSSTTSS-HHHHHHHHHH-HHHHHSHHHHH-H
T ss_pred             EEEeEecccccccccchhhcccccccccccccccccccccccccccccccccccc-cccccccccc-ccccccccccc-c
Confidence            57899999999999999999999987666666533222221  123356666555 8999999999 46777777 66 8


Q ss_pred             hhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhcc-----cccc
Q 013651           78 FRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVS-----FFVP  152 (439)
Q Consensus        78 ~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  152 (439)
                      +.+.+.+.++.+++.|.+....++.+|+.++++.+++|+++.++||.+++..+. .....+.+.+..+...     ....
T Consensus       114 ~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  192 (463)
T PF00067_consen  114 LEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLFGKDFGSLDD-EDFEEFLEAFDELFELLSNFFWNLP  192 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHHSSHHHGTTH-HHHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred             cccccccccccccccccccccccceeeeecccccccccccccccccceeeeccc-ccccccccccccccccccccccccc
Confidence            999999999999999999866555899999999999999999999999874321 1123455555554221     1233


Q ss_pred             cccchhhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHH-hhCCCcccCCHHHHHHHH
Q 013651          153 DYFPLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIR-KNCGFKVDLTLDHIKAVL  231 (439)
Q Consensus       153 ~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~-~~~~~~~~l~~~~i~~~~  231 (439)
                      ..+|++.++.  ....+...++.+.+.+++...++++++..+.+.  ....|+++.+++.. +.++ +..++++++..++
T Consensus       193 ~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~  267 (463)
T PF00067_consen  193 FFFPWLKYLP--TPLFRRFKRARDRLRKYIKEIIEERREELDDGD--ESRRDLLDSLLQASSDSDG-PSGLSDEEIAAEL  267 (463)
T ss_dssp             HHHHHHCTSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSS--SSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHH
T ss_pred             cccccccccc--ccccccccccccccccccccccccccccccccc--ccccccccccccccccccc-ccccccccccccc
Confidence            4455544432  234566677778899999999999887765531  12689999999987 2222 1379999999999


Q ss_pred             HHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCccccc
Q 013651          232 MNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRET  311 (439)
Q Consensus       232 ~~~~~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~  311 (439)
                      ..+++||+|||+.+++|++++|++||++|+||++||+++.++ .+.++.+++++||||+|||+|++|++|+++..++|.+
T Consensus       268 ~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~  346 (463)
T PF00067_consen  268 LTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGD-GREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVA  346 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTT-SSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999999999999999999999999965 5678999999999999999999999999996689999


Q ss_pred             ccceeecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHHHH
Q 013651          312 IQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLAL  391 (439)
Q Consensus       312 ~~~~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l  391 (439)
                      .+|++++||.|||||.|.++.+++||||++|+||++|+|+||++.+.........++|||.|+|.|||++||++|+++++
T Consensus       347 ~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l  426 (463)
T PF00067_consen  347 TEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFL  426 (463)
T ss_dssp             SSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999865223456789999999999999999999999999


Q ss_pred             HHHHhhceeecCCCC
Q 013651          392 ANLLYKFDWEMPLGI  406 (439)
Q Consensus       392 ~~ll~~~~~~~~~~~  406 (439)
                      |.||++|++++.++.
T Consensus       427 a~ll~~f~~~~~~~~  441 (463)
T PF00067_consen  427 AKLLRRFDFELVPGS  441 (463)
T ss_dssp             HHHHHHEEEEESTTS
T ss_pred             HHHHHhCEEEECCCC
Confidence            999999999997764


No 24 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=6.6e-67  Score=501.81  Aligned_cols=415  Identities=25%  Similarity=0.389  Sum_probs=322.3

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |++++|+.+.|+++||+++++|+++.+..|.+++........  .|.++++ .+|+.|+++||. +++.|+.+.+..+.+
T Consensus        53 ~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~--~~~~i~~-~~g~~wk~~Rk~-l~~~f~~~~l~~~~~  128 (489)
T PLN02936         53 YRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFL--FGSGFAI-AEGELWTARRRA-VVPSLHRRYLSVMVD  128 (489)
T ss_pred             EEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHH--hcCcccc-CCchHHHHHHHh-hcCccCHHHHHHHHH
Confidence            578999999999999999999998776778776432222212  2555554 459999999999 589999888888754


Q ss_pred             -hHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhcc--cccccccch
Q 013651           81 -IREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVS--FFVPDYFPL  157 (439)
Q Consensus        81 -~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~  157 (439)
                       ++.++++.+++.|.+...+|.++|+.++++.+++|+++.++||.+++....  . ..+.+.+...+..  ......+|+
T Consensus       129 ~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~p~  205 (489)
T PLN02936        129 RVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVFNYNFDSLTT--D-SPVIQAVYTALKEAETRSTDLLPY  205 (489)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHcCCCcccccc--C-cHHHHHHHHHHHHHHHhhhccchH
Confidence             788999999999987665677899999999999999999999999886422  1 2334333332111  112223443


Q ss_pred             hhh--hhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccc------c--ccccCCHHHHHHHHHhhCCCcccCCHHHH
Q 013651          158 IGW--IDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKS------E--LAQQEDIIDVLLQIRKNCGFKVDLTLDHI  227 (439)
Q Consensus       158 l~~--l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~--~~~~~dll~~ll~~~~~~~~~~~l~~~~i  227 (439)
                      +.+  +..+.+..++..++...+.+++.+.++++++..+.+.      .  .....|+++.|++..      ..++.+++
T Consensus       206 ~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~------~~~~~~~i  279 (489)
T PLN02936        206 WKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASR------EEVSSVQL  279 (489)
T ss_pred             HhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCchHHHHHHHhcc------ccCCHHHH
Confidence            321  1111123345667777778888887776553221100      0  012468999998642      25899999


Q ss_pred             HHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCc
Q 013651          228 KAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLI  307 (439)
Q Consensus       228 ~~~~~~~~~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~  307 (439)
                      ..+++.+++||+|||+++++|++|+|++||++|+|+++|++++++.  ..++++++++||||+|||+|+||++||++..+
T Consensus       280 ~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~--~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~  357 (489)
T PLN02936        280 RDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG--RPPTYEDIKELKYLTRCINESMRLYPHPPVLI  357 (489)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC--CCCCHHHHhhCHHHHHHHHHhhhcCCCccccc
Confidence            9999999999999999999999999999999999999999999875  34788999999999999999999999999988


Q ss_pred             ccccccceeecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccC--CCCCcceeeecCCCCCCCcChhHHHH
Q 013651          308 PRETIQKCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCID--FKGQHFELIPFGAGRRICPGLNMGIA  385 (439)
Q Consensus       308 ~r~~~~~~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~  385 (439)
                      +|.+.+|+.++|+.|||||.|+++.+++||||++|+||++|+||||++++..  ....+..++|||.|+|.|||++||++
T Consensus       358 ~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~  437 (489)
T PLN02936        358 RRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALL  437 (489)
T ss_pred             ceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHH
Confidence            7777778888999999999999999999999999999999999999965321  11224589999999999999999999


Q ss_pred             HHHHHHHHHHhhceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          386 TVDLALANLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       386 e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      |++++++.|+++|+++++++.   ++  ....++++.|+.+++|++++|.
T Consensus       438 ~~~~~la~ll~~f~~~~~~~~---~~--~~~~~~~~~~~~~~~v~~~~R~  482 (489)
T PLN02936        438 EAIVALAVLLQRLDLELVPDQ---DI--VMTTGATIHTTNGLYMTVSRRR  482 (489)
T ss_pred             HHHHHHHHHHHhCeEEecCCC---cc--ceecceEEeeCCCeEEEEEeee
Confidence            999999999999999988653   22  2234566777779999999885


No 25 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=6.6e-66  Score=492.39  Aligned_cols=392  Identities=19%  Similarity=0.300  Sum_probs=308.0

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhh-hh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKK-FR   79 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~-~~   79 (439)
                      |++|+|++++|+++||+++++++.++...|..+..... ..+.  |.+.++..+|+.|+.+|+.+ .+.|+++.++. +.
T Consensus        67 ~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~-~~~l--g~~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~  142 (463)
T PLN02774         67 FKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSM-LDIL--GTCNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLL  142 (463)
T ss_pred             ccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHH-HHHh--CccchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHH
Confidence            67899999999999999999999876666643322111 1222  33344455799999999995 78999998876 78


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhc-ccccccccchh
Q 013651           80 PIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLV-SFFVPDYFPLI  158 (439)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~l  158 (439)
                      +.+.+.++++++.|..    ++++|+.+.+..+++++++.++||.+.+.     ....+.+.+..+.. ...++..+|. 
T Consensus       143 ~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~lp~-  212 (463)
T PLN02774        143 PKIDEFMRSHLSGWDG----LKTIDIQEKTKEMALLSALKQIAGTLSKP-----ISEEFKTEFFKLVLGTLSLPIDLPG-  212 (463)
T ss_pred             HHHHHHHHHHHHhhCC----CCCEEeeHHHHHHHHHHHHHHHcCCCChH-----HHHHHHHHHHHHhcccccCCcCCCC-
Confidence            8888888888888752    46799999999999999999999976442     22233333333321 1111111221 


Q ss_pred             hhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHHcc
Q 013651          159 GWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAG  238 (439)
Q Consensus       159 ~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG  238 (439)
                             ...++..++.+.+.+++.+.|+++++..   ..   ..|+++.|++...++   ..++++++.+++..+++||
T Consensus       213 -------~~~~~~~~~~~~~~~~~~~~i~~r~~~~---~~---~~d~l~~ll~~~~~~---~~~s~~ei~~~~~~ll~Ag  276 (463)
T PLN02774        213 -------TNYRSGVQARKNIVRMLRQLIQERRASG---ET---HTDMLGYLMRKEGNR---YKLTDEEIIDQIITILYSG  276 (463)
T ss_pred             -------hhhhHHHHHHHHHHHHHHHHHHHHHhcC---CC---cccHHHHHHhCccCC---CCCCHHHHHHHHHHHHHhc
Confidence                   1224455677888889999998876542   11   579999999743221   2589999999999999999


Q ss_pred             ccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC--CCCCCccccCCChhHHHHHHHhhccCCCCCCCccccccccee
Q 013651          239 ADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGN--KGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCV  316 (439)
Q Consensus       239 ~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~--~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~  316 (439)
                      +|||+++++|++++|+.||++|+|+++|++++.+..  .+.++++++++||||+|||+|++|++|+++. ++|.+.+|++
T Consensus       277 ~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~  355 (463)
T PLN02774        277 YETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDME  355 (463)
T ss_pred             chhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCee
Confidence            999999999999999999999999999999998641  3457899999999999999999999999997 5699999999


Q ss_pred             ecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHHHHHHHHh
Q 013651          317 IDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLY  396 (439)
Q Consensus       317 ~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~  396 (439)
                      ++||.|||||.|.++.+.+||||++|+||++|+||||++.+..  . ...++|||.|+|.|||++||++|++++++.|++
T Consensus       356 l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~--~-~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~  432 (463)
T PLN02774        356 LNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE--S-HNYFFLFGGGTRLCPGKELGIVEISTFLHYFVT  432 (463)
T ss_pred             ECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC--C-CccccCcCCCCCcCCcHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999975421  1 236999999999999999999999999999999


Q ss_pred             hceeecCCCCCCCcCccccccCceecccCceeEeeee
Q 013651          397 KFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKL  433 (439)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  433 (439)
                      +|+|++.++..  ..   .  ..+..|++++.+++++
T Consensus       433 ~f~~~~~~~~~--~~---~--~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        433 RYRWEEVGGDK--LM---K--FPRVEAPNGLHIRVSP  462 (463)
T ss_pred             hceEEECCCCc--cc---c--CCCCCCCCCceEEeee
Confidence            99999976532  11   1  1133467899988875


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=2.2e-65  Score=487.73  Aligned_cols=396  Identities=19%  Similarity=0.293  Sum_probs=309.0

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhh-hh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKK-FR   79 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~-~~   79 (439)
                      |++|+|++++|+|+||+++++++.+++..|..+... ....+.  |.+.++..+|+.|+++|++ +.+.|+...+.. +.
T Consensus        48 ~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~-~~~~l~--g~~~~~~~~g~~wr~~r~~-~~~~~~~~~l~~~~~  123 (452)
T PLN03141         48 FKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK-SLTELM--GKSSILLINGSLQRRVHGL-IGAFLKSPHLKAQIT  123 (452)
T ss_pred             eeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch-hHHHHh--CcccccccCcHHHHHHHHH-HHHhcCcHHHHHHHH
Confidence            678999999999999999999999887777755321 222222  4444555579999999998 577887776665 35


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhccc-ccccccchh
Q 013651           80 PIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSF-FVPDYFPLI  158 (439)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l  158 (439)
                      +.+.+.++++++.|.    .+..+++.+.+..++++++++++||.+.+.     ....+.+.+..+.... ..+..+|..
T Consensus       124 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~vi~~~~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~~  194 (452)
T PLN03141        124 RDMERYVSESLDSWR----DDPPVLVQDETKKIAFEVLVKALISLEPGE-----EMEFLKKEFQEFIKGLMSLPIKLPGT  194 (452)
T ss_pred             HHHHHHHHHHHHhcc----CCCCEEhHHHHHHHHHHHHHHHHcCCCchH-----HHHHHHHHHHHHhhhHHhCccCCCch
Confidence            566666666666653    356899999999999999999999976542     2333333333332211 111122221


Q ss_pred             hhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccc--cccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHH
Q 013651          159 GWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSEL--AQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFV  236 (439)
Q Consensus       159 ~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~  236 (439)
                              ...+..++...+.+++...|++++...+.+...  ....|+++.++++.  +   ..+++++++.++.++++
T Consensus       195 --------~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~--~---~~l~~~~i~~~~~~ll~  261 (452)
T PLN03141        195 --------RLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLRDG--S---DELTDDLISDNMIDMMI  261 (452)
T ss_pred             --------HhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHhcC--C---CCCCHHHHHHHHHHHHH
Confidence                    123344667888889999998877553221100  01368999998753  1   25899999999999999


Q ss_pred             ccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhc---CCCCCCCccccCCChhHHHHHHHhhccCCCCCCCccccccc
Q 013651          237 AGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIG---GNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQ  313 (439)
Q Consensus       237 AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~---~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~  313 (439)
                      ||+|||+++++|++++|++||++|+|+++|++++.+   ..+..++.+++.+||||+|||+|++|+||+++. ++|.+.+
T Consensus       262 Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~  340 (452)
T PLN03141        262 PGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMK  340 (452)
T ss_pred             hcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecC
Confidence            999999999999999999999999999999998863   113457889999999999999999999999986 6899999


Q ss_pred             ceeecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHHHHHH
Q 013651          314 KCVIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALAN  393 (439)
Q Consensus       314 ~~~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~  393 (439)
                      |++++||.|||||.|.++.+++||||++|+||++|+||||++.+.    .+..++|||.|+|.|+|++||++|+++++|.
T Consensus       341 d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~  416 (452)
T PLN03141        341 DVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHH  416 (452)
T ss_pred             CeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999997532    3567999999999999999999999999999


Q ss_pred             HHhhceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          394 LLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       394 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      |+++|+|++.++.   .  .   ...+++|+.++.|++++|.
T Consensus       417 ll~~f~~~~~~~~---~--~---~~~~~~~~~~~~~~~~~~~  450 (452)
T PLN03141        417 LVTRFRWVAEEDT---I--V---NFPTVRMKRKLPIWVTRID  450 (452)
T ss_pred             HHhcCeeecCCCC---e--e---ecccccCCCCceEEEEeCC
Confidence            9999999986542   1  1   1246788889999999984


No 27 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.4e-64  Score=482.78  Aligned_cols=389  Identities=20%  Similarity=0.308  Sum_probs=309.4

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |++|+|++++|+|+||+++++++.++...|.  +......... .|...++..+|+.|+++||+ +.+.|++++++.+.+
T Consensus        72 ~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~~~~-~g~~~l~~~~g~~w~~~Rk~-l~~~f~~~~l~~~~~  147 (463)
T PLN02196         72 FKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASKERM-LGKQAIFFHQGDYHAKLRKL-VLRAFMPDAIRNMVP  147 (463)
T ss_pred             heeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHHHHH-cCcccccccCcHHHHHHHHH-HHHhcChHHHHHHHH
Confidence            5789999999999999999999987766552  3222222222 24444445569999999999 578999999999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhcccccccccchhhh
Q 013651           81 IREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGW  160 (439)
Q Consensus        81 ~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~  160 (439)
                      .+.+.++++++.|.     ++++|+.+++..+++++++.++||.+...     ....+.+........   ...+|+.  
T Consensus       148 ~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~~~fG~~~~~-----~~~~~~~~~~~~~~~---~~~~~~~--  212 (463)
T PLN02196        148 DIESIAQESLNSWE-----GTQINTYQEMKTYTFNVALLSIFGKDEVL-----YREDLKRCYYILEKG---YNSMPIN--  212 (463)
T ss_pred             HHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHHHHHcCCCCch-----HHHHHHHHHHHHhcc---hhccccc--
Confidence            99999999998874     45799999999999999999999987532     122233322222111   1112321  


Q ss_pred             hhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHHcccc
Q 013651          161 IDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGAD  240 (439)
Q Consensus       161 l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~d  240 (439)
                      ++  ....++..++...+.+++.+.|+++++...   .   ..|+++.+++.   +   ..++++++..+++.+++||+|
T Consensus       213 ~p--~~~~~~~~~a~~~~~~~~~~~i~~~~~~~~---~---~~d~l~~ll~~---~---~~l~~~ei~~~~~~~~~Ag~d  278 (463)
T PLN02196        213 LP--GTLFHKSMKARKELAQILAKILSKRRQNGS---S---HNDLLGSFMGD---K---EGLTDEQIADNIIGVIFAARD  278 (463)
T ss_pred             CC--CccchHHHHHHHHHHHHHHHHHHHHhhcCC---C---cccHHHHHHhc---C---CCCCHHHHHHHHHHHHHhhhH
Confidence            11  012345567778888899988888765421   1   57899998852   1   268999999999999999999


Q ss_pred             chHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC--CCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccceeec
Q 013651          241 TSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGN--KGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVID  318 (439)
Q Consensus       241 tt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~--~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~  318 (439)
                      ||+++++|++++|++||++|+|+++|++.+.+..  .+.++.++++++|||+|||+|++|++|+++.. .|.+.+|++++
T Consensus       279 Tta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~  357 (463)
T PLN02196        279 TTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYE  357 (463)
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccC
Confidence            9999999999999999999999999999988632  34578899999999999999999999999995 59999999999


Q ss_pred             ceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHHHHHHHHhhc
Q 013651          319 GYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKF  398 (439)
Q Consensus       319 g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~  398 (439)
                      ||.|||||.|+++.+++||||++|+||++|+||||++..     .+..++|||.|+|.|+|++||++|++++++.|+++|
T Consensus       358 g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f  432 (463)
T PLN02196        358 GYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKY  432 (463)
T ss_pred             CEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999632     345799999999999999999999999999999999


Q ss_pred             eeecCCCCCCCcCccccccCceecccCceeEeeeec
Q 013651          399 DWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLS  434 (439)
Q Consensus       399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r  434 (439)
                      +|+++++.    ..+  .+..+..|+.++.|+++.+
T Consensus       433 ~~~~~~~~----~~~--~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        433 RWSIVGTS----NGI--QYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             EEEEcCCC----Cce--EEcccccCCCCceEEEecC
Confidence            99987642    112  2333456888999988754


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=3.4e-63  Score=479.46  Aligned_cols=400  Identities=20%  Similarity=0.286  Sum_probs=310.6

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcC-ChhHHhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLF-NSNRAKKFR   79 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~f-s~~~~~~~~   79 (439)
                      |++++|+.++|+++||+++++|+.++ +.|.++....... .  .|.+.++..+|+.|+++||. +.+.| +++.++.+.
T Consensus        85 ~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~~~~~~-~--~g~~~~~~~~g~~w~~~R~~-~~~~f~~~~~l~~~~  159 (490)
T PLN02302         85 YKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWPESTVE-L--IGRKSFVGITGEEHKRLRRL-TAAPVNGPEALSTYI  159 (490)
T ss_pred             eeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCchhHHH-H--hccccccccCcHHHHHHHHH-HHhccCCHHHHHHHH
Confidence            46778999999999999999999865 5565443222212 1  24444445569999999999 46777 577899999


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhccc-ccccccchh
Q 013651           80 PIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSF-FVPDYFPLI  158 (439)
Q Consensus        80 ~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l  158 (439)
                      +.+.++++++++.|..    ++.+|+.+++..++++++++++||.+.+.     ....+.+.+....... .....+|..
T Consensus       160 ~~i~~~v~~~~~~~~~----~~~v~~~~~~~~~~~~vi~~~~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~~  230 (490)
T PLN02302        160 PYIEENVKSCLEKWSK----MGEIEFLTELRKLTFKIIMYIFLSSESEL-----VMEALEREYTTLNYGVRAMAINLPGF  230 (490)
T ss_pred             HHHHHHHHHHHHHhcC----CCCEehHHHHHHHHHHHHHHHHcCCCChH-----HHHHHHHHHHHHHHHhhhCCcCCCch
Confidence            9999999999998853    34699999999999999999999987653     2223322222221110 111112221


Q ss_pred             hhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHHcc
Q 013651          159 GWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAG  238 (439)
Q Consensus       159 ~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG  238 (439)
                              ...+..++.+.+.+++.+.++++++....+. ..+..|+++.|++...+++  ..+++++++.++..+++||
T Consensus       231 --------~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~--~~~~~~~i~~~~~~~~~Ag  299 (490)
T PLN02302        231 --------AYHRALKARKKLVALFQSIVDERRNSRKQNI-SPRKKDMLDLLLDAEDENG--RKLDDEEIIDLLLMYLNAG  299 (490)
T ss_pred             --------hhHHHHHHHHHHHHHHHHHHHHHHHhhhccC-CCCcCCHHHHHHhhhccCC--CCCCHHHHHHHHHHHHHhh
Confidence                    1123345567788888888888765432211 1125799999998754432  3589999999999999999


Q ss_pred             ccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCC---CCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccce
Q 013651          239 ADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGN---KGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKC  315 (439)
Q Consensus       239 ~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~---~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~  315 (439)
                      +|||+++++|++++|++||++|+|+++|++++++..   ...++++++++||||+|||+|++|++|+++. .+|.+.+|+
T Consensus       300 ~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~  378 (490)
T PLN02302        300 HESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFREAKTDV  378 (490)
T ss_pred             HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chhcccCCE
Confidence            999999999999999999999999999999998641   1236889999999999999999999999998 579999999


Q ss_pred             eecceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHHHHHHHH
Q 013651          316 VIDGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLL  395 (439)
Q Consensus       316 ~~~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll  395 (439)
                      +++|+.|||||.|.++.+++||||++|+||++|+|+||++..    ..+..++|||.|+|.|+|++||.+|++++++.|+
T Consensus       379 ~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll  454 (490)
T PLN02302        379 EVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFL  454 (490)
T ss_pred             eECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999653    2345799999999999999999999999999999


Q ss_pred             hhceeecCCCCCCCcCccccccCceecccCceeEeeeeccc
Q 013651          396 YKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSIM  436 (439)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~~  436 (439)
                      ++|+|++.++.  ..  +.  +.....|+.++.+++++|.+
T Consensus       455 ~~f~~~~~~~~--~~--~~--~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        455 LGYRLERLNPG--CK--VM--YLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             hcCeeEEcCCC--Cc--ce--eCCCCCCCCCceEEEEeccC
Confidence            99999987542  11  22  22336777899999988753


No 29 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.3e-62  Score=467.62  Aligned_cols=396  Identities=17%  Similarity=0.239  Sum_probs=304.0

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCcccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPASVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRP   80 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~   80 (439)
                      |++++|++++|+|+||+++++++.++...|.+++..... .+. ++.++++. +|+.|+++||++ .++++.+.+..+..
T Consensus        71 ~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~-~~l-g~~~l~~~-~g~~wr~~R~~~-~~f~~~~~~~~~~~  146 (472)
T PLN02987         71 FMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGSIS-NLL-GKHSLLLM-KGNLHKKMHSLT-MSFANSSIIKDHLL  146 (472)
T ss_pred             hhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHHHH-HHh-Cccccccc-CcHHHHHHHHHH-HHhcChHHHHHHHH
Confidence            568899999999999999999999887777655322222 222 23455555 699999999994 56555555544331


Q ss_pred             -hHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhcccccccccchhh
Q 013651           81 -IREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIG  159 (439)
Q Consensus        81 -~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~  159 (439)
                       .+.+.++..++.|.      +++++.+.+..++++++++++||.+.+.     ..+.+.+.+....... ....+|++.
T Consensus       147 ~~~~~~~~~~~~~~~------~~v~~~~~~~~~t~~vi~~~~fg~~~~~-----~~~~~~~~~~~~~~~~-~~~~~p~l~  214 (472)
T PLN02987        147 LDIDRLIRFNLDSWS------SRVLLMEEAKKITFELTVKQLMSFDPGE-----WTESLRKEYVLVIEGF-FSVPLPLFS  214 (472)
T ss_pred             HHHHHHHHHHHHhhc------cceehHHHHHHHHHHHHHHHHcCCCChH-----HHHHHHHHHHHHHhhh-hcCCCcCCC
Confidence             12233333344331      3699999999999999999999976543     1222333232221111 112244431


Q ss_pred             hhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHHccc
Q 013651          160 WIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGA  239 (439)
Q Consensus       160 ~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~  239 (439)
                            +..++..++...+.+++.+.|+++++....+..  ...|+++.|++..      ..+++++++.++..+++||+
T Consensus       215 ------~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~--~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~  280 (472)
T PLN02987        215 ------TTYRRAIQARTKVAEALTLVVMKRRKEEEEGAE--KKKDMLAALLASD------DGFSDEEIVDFLVALLVAGY  280 (472)
T ss_pred             ------chHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc--ccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhcc
Confidence                  234566778888999999999988765332211  1579999999752      15899999999999999999


Q ss_pred             cchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcC--CCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccceee
Q 013651          240 DTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGG--NKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVI  317 (439)
Q Consensus       240 dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~--~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~  317 (439)
                      |||+.+++|++++|++||++|+++++|++.+.+.  ..+.++.+++.+|||++||++|++|+||+++. ++|.+.+|+++
T Consensus       281 ~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~  359 (472)
T PLN02987        281 ETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEV  359 (472)
T ss_pred             chHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeE
Confidence            9999999999999999999999999999998752  13457889999999999999999999999986 67999999999


Q ss_pred             cceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHHHHHHHHhh
Q 013651          318 DGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYK  397 (439)
Q Consensus       318 ~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~  397 (439)
                      +||.|||||.|.++.+.+||||++|+||++|+||||++.... ......++|||.|+|.|||++||++|++++++.|+++
T Consensus       360 ~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~  438 (472)
T PLN02987        360 KGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTR  438 (472)
T ss_pred             CCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999975422 1234579999999999999999999999999999999


Q ss_pred             ceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          398 FDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      |+|+++++.   .+    .+..++.|.+++.+++++|.
T Consensus       439 f~~~~~~~~---~~----~~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        439 FSWVPAEQD---KL----VFFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             eEEEECCCC---ce----eecccccCCCCceEEEEecc
Confidence            999987653   11    22447778888999999884


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.4e-57  Score=395.73  Aligned_cols=407  Identities=20%  Similarity=0.317  Sum_probs=318.0

Q ss_pred             CeeecCCcceEEEcCHHHHHHHHHHcCccccCCCc-ccchhhhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhh
Q 013651            1 MSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA-SVAQQKLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFR   79 (439)
Q Consensus         1 f~~~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~   79 (439)
                      |++.+||+.+-++.||+....++.......+-... .......  .|+++++...+.....+.+++ ...+...+++++.
T Consensus        68 FTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v--Fg~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~  144 (486)
T KOG0684|consen   68 FTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV--FGKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLV  144 (486)
T ss_pred             EEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh--cCCCccccCCCchHHHHHHHH-HHHhchhhHHHHH
Confidence            78999999999999999999999754222221111 1111222  378888776677788887874 6777888999999


Q ss_pred             hhHHHHHHHHHHH-HHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhc-ccccccccch
Q 013651           80 PIREDEVSRMMEK-ISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLV-SFFVPDYFPL  157 (439)
Q Consensus        80 ~~i~~~~~~l~~~-l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~  157 (439)
                      +.|.+++.+.++. |.+   +|....+......+.+.+.-.++||+.-...     .+.....+.++-. .......||.
T Consensus       145 e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~ll~~e~r~~~-----d~~~a~l~~dLd~~F~~~d~~FP~  216 (486)
T KOG0684|consen  145 ELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRLLLGGEVRDQL-----DADVAKLYHDLDQGFQPFDFLFPY  216 (486)
T ss_pred             HHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHHhhhhhhhhhh-----cchHHHHHHHHhccccchHhhccc
Confidence            9999999999888 443   4545556666666666666666666644431     2233333333322 1223334553


Q ss_pred             hhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHHc
Q 013651          158 IGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVA  237 (439)
Q Consensus       158 l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~A  237 (439)
                        +++  .+..++..++.+.+.+.+...|.++++..+.     ...|+++.+++...++   ...+++|+....+.+++|
T Consensus       217 --~LP--~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~-----~~~dmlq~l~~~y~dg---~~~te~e~a~~li~~LwA  284 (486)
T KOG0684|consen  217 --NLP--IPLLRRRDRARKKISKIFSKIILDRRASISK-----WDNDMLQSLMEKYKDG---RPTTEEEIAGLLIGLLWA  284 (486)
T ss_pred             --CCC--cchhhhHHHHHHHHHHHHHHHHHHHHhcccc-----ccHHHHHHHHHHhhcC---CcCcHHHHHHHHHHHHHh
Confidence              121  1445666788999999999999999987643     1569999999844444   379999999999999999


Q ss_pred             cccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccceee
Q 013651          238 GADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVI  317 (439)
Q Consensus       238 G~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~  317 (439)
                      |+.||+.|.+|++++|++|||+++.+++|+++++|+....++.+.+++||.|++||+|||||+||.+.. .|.+.+|.++
T Consensus       285 ~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~-~R~v~~D~tv  363 (486)
T KOG0684|consen  285 GQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSL-MRKVHEDLTV  363 (486)
T ss_pred             ccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhH-HHhhccceee
Confidence            999999999999999999999999999999999998666799999999999999999999999999985 5999999988


Q ss_pred             cc----eeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCCC--C--cceeeecCCCCCCCcChhHHHHHHHH
Q 013651          318 DG----YAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKG--Q--HFELIPFGAGRRICPGLNMGIATVDL  389 (439)
Q Consensus       318 ~g----~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~--~--~~~~~~Fg~G~r~C~G~~lA~~e~~~  389 (439)
                      .+    |.||+|..|.++++.+|+||++|+||+.|+|+||++++++.+.  .  .+.+||||+|.|.|||+.||.+|++.
T Consensus       364 ~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~  443 (486)
T KOG0684|consen  364 PGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQ  443 (486)
T ss_pred             ccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHH
Confidence            65    9999999999999999999999999999999999987654321  1  34569999999999999999999999


Q ss_pred             HHHHHHhhceeecCCCCCCCcCccccccCceecccCceeEeeeecc
Q 013651          390 ALANLLYKFDWEMPLGIKSHDLDFDVLLGIAMHKKNALSLLPKLSI  435 (439)
Q Consensus       390 ~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~r~  435 (439)
                      ++..+|++||+++.++. ..+++..   .++..|.++++|+.+.|+
T Consensus       444 ~~~l~L~~fdleLid~~-~P~~d~s---~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  444 FISLLLRHFDLELIDGP-FPEVDYS---RMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             HHHHHHHHcceeecCCC-CCCCCHH---HhhcCCCCCceEEEeecC
Confidence            99999999999999862 2233332   237789999999999885


No 31 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=9.3e-56  Score=412.87  Aligned_cols=360  Identities=26%  Similarity=0.399  Sum_probs=288.6

Q ss_pred             ceEEEcCHHHHHHHHHHcCccccCCCcccchh--hhccCCCccccCCCChhHHHHHHhHhhhcCChhHHhhhhhhHHHHH
Q 013651            9 PSLVVSSVKMAKEILKTHGLQFCSRPASVAQQ--KLSYNGLDLAFSPYYEYWREIRKICVIHLFNSNRAKKFRPIREDEV   86 (439)
Q Consensus         9 ~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~w~~~Rr~~~~~~fs~~~~~~~~~~i~~~~   86 (439)
                      ..+++++++.+++++.+.. .+++........  .....|.+.+...+|+.|.++||+ +++.|+++.++.+.+.|.+.+
T Consensus        49 ~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~Rkl-~~~~F~~~~~~~~~~~i~~~~  126 (411)
T COG2124          49 GFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKL-LAPAFTPRALRGYRPLIREIA  126 (411)
T ss_pred             eEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHHHH-hccccCHHHHHHHHHHHHHHH
Confidence            3799999999999998653 222221111111  112225554555679999999999 689999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhcccccccccchhhhhhhHhh
Q 013651           87 SRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIGWIDKLTG  166 (439)
Q Consensus        87 ~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~  166 (439)
                      +++++.+ .   .+..+++.+.+..+++++++ .+||.+.+      +...+............     |....    ..
T Consensus       127 ~~~~~~~-~---~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~------~~~~~~~~~~~~~~~~~-----~~~~~----~~  186 (411)
T COG2124         127 DRLLDDL-W---QGGADLVLDFAAELTLRVIA-ELLGVPLE------DRPQLLRWSDALLLRLD-----PDLGP----EE  186 (411)
T ss_pred             HHHHHhc-c---cCCchhHHHHhhhhhHHHHH-HHhCCCHH------HHHHHHHHHHHHHhccC-----cccCC----cc
Confidence            9999999 3   22678899999999999999 88998887      34444444444322210     22111    12


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccCCHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHHccccchHHHH
Q 013651          167 MMQRLQNSFQELDRFYQELMDEHLDPNRTKSELAQQEDIIDVLLQIRKNCGFKVDLTLDHIKAVLMNVFVAGADTSAATV  246 (439)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dtt~~~l  246 (439)
                      ...+..++...+.+++..+|++++...        ..|+++.|+.+..+++  ..+|++|++++++.+++||+|||+++|
T Consensus       187 ~~~~~~~a~~~~~~~~~~li~~rR~~~--------~~dlls~l~~a~~~~~--~~lsd~Ei~~~~~~ll~AGheTTa~~l  256 (411)
T COG2124         187 PWRRARAARRELDAYLRALIAERRAAP--------RDDLLSLLLSAEDDGG--GRLSDDEIRDELITLLVAGHETTANAL  256 (411)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhccCC--------cccHHHHHHHHhhCCC--CcCCHHHHHHHHHHHHHhhhHHHHHHH
Confidence            345667888999999999999998332        6799999999877764  259999999999999999999999999


Q ss_pred             HHHHHHHhhChHHHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhccCCCCCCCcccccccceeecceeeCCCC
Q 013651          247 VWAMTYLMKNPRAMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKT  326 (439)
Q Consensus       247 ~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~gt  326 (439)
                      +|++|.|++||++++++++|.+.                 ||++++++|+||+|||++. ++|.+.+|++++|+.||||+
T Consensus       257 ~~a~~~L~~~P~~~~~l~~e~~~-----------------~~~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~  318 (411)
T COG2124         257 AWALYALLRHPDQLAKLRAEPDR-----------------PLLEAVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGT  318 (411)
T ss_pred             HHHHHHHHHCchHHHHHHhCcch-----------------HHHHHHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCC
Confidence            99999999999999999988532                 8999999999999999999 88999999999999999999


Q ss_pred             EEEeehhhhccCCCCCCCCCCCCCCcccccccCCCCCcceeeecCCCCCCCcChhHHHHHHHHHHHHHHhhceeecCCCC
Q 013651          327 RVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLNMGIATVDLALANLLYKFDWEMPLGI  406 (439)
Q Consensus       327 ~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~  406 (439)
                      .|.++++++||||++|+||++|||+||.          ..++|||+|.|.|+|++||++|++++++.|+++|++....+ 
T Consensus       319 ~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-  387 (411)
T COG2124         319 VVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-  387 (411)
T ss_pred             EEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-
Confidence            9999999999999999999999999997          36999999999999999999999999999999999877654 


Q ss_pred             CCCcCccccccCceecccCceeEeeeec
Q 013651          407 KSHDLDFDVLLGIAMHKKNALSLLPKLS  434 (439)
Q Consensus       407 ~~~~~~~~~~~~~~~~~~~~l~~~~~~r  434 (439)
                      . .    ......+..++...++.++.+
T Consensus       388 ~-~----~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         388 P-P----PLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             C-C----CccccccccCCCcceeeeecC
Confidence            1 1    112244445555566665544


No 32 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.3e-54  Score=408.01  Aligned_cols=369  Identities=16%  Similarity=0.270  Sum_probs=263.7

Q ss_pred             CeeecCCcce-------EEEcCHHHHHHHHHH----cCccccCCCcccchhhhccCCCc---cccCCCChhHHHHHHhHh
Q 013651            1 MSLRLGFSPS-------LVVSSVKMAKEILKT----HGLQFCSRPASVAQQKLSYNGLD---LAFSPYYEYWREIRKICV   66 (439)
Q Consensus         1 f~~~~g~~~~-------v~v~dp~~i~~i~~~----~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~g~~w~~~Rr~~~   66 (439)
                      |+.+++|.|+       |+++||++++.+|..    ++..|..... .... +  .|.+   .++..+|+.|+++||+ +
T Consensus        59 fk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~~~~~~~~~-~~~~-l--~G~~~~~s~~~~~g~~H~r~Rrl-l  133 (480)
T PLN02648         59 FRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKRDVFTGTYM-PSTA-F--TGGYRVLSYLDPSEPKHAKLKSF-L  133 (480)
T ss_pred             EEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccccccceeeec-cCcc-c--cCCceeeeecCCCCchHHHHHHH-H
Confidence            5677877666       999999999999974    3333443211 1112 2  2544   5556679999999999 5


Q ss_pred             hhcCChhHHhhhhhhHHHHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhh
Q 013651           67 IHLFNSNRAKKFRPIREDEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETL  146 (439)
Q Consensus        67 ~~~fs~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  146 (439)
                      .+.|+ ..++.+.+.|.+.++++++.|......+.++|+.+.++.+++|++++++||.+.+..   .-.+.+...+..+.
T Consensus       134 ~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vdv~~~~~~lt~~vi~~~lfG~~~~~~---~l~~~~~~~~~~~~  209 (480)
T PLN02648        134 FELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKAEFNDPLDQMAFNFLCKALTGKDPSET---ALGSDGPALIQKWL  209 (480)
T ss_pred             HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccccchHHHHHHHHHHHHHcCCCcchh---hhccchhHHHHHHH
Confidence            78898 467889999999999999999654334567999999999999999999999866531   01112222222221


Q ss_pred             cccccccccchhhhhhhHhhhHHHHHHHHHHHHHHHHHHHHhhcCCC----ccccc--ccccCCHHHHHHHHHhhCCCcc
Q 013651          147 VSFFVPDYFPLIGWIDKLTGMMQRLQNSFQELDRFYQELMDEHLDPN----RTKSE--LAQQEDIIDVLLQIRKNCGFKV  220 (439)
Q Consensus       147 ~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~--~~~~~dll~~ll~~~~~~~~~~  220 (439)
                      ..    ..+|...                ..+...++..+.++....    .....  .+.-.+.++.+++...+.    
T Consensus       210 ~~----~~~p~~~----------------~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~----  265 (480)
T PLN02648        210 AL----QLAPLAS----------------TGLPHVLEELLLHTFPLPFFLVKSDYDKLYDFFRASATEALDLAEKF----  265 (480)
T ss_pred             HH----HhhHHHH----------------cCchHHHHHHhhcccCCchhhhhccHHHHHHHHHHHHHHHHHHHHhc----
Confidence            10    0011110                001111111111110000    00000  000012223455443332    


Q ss_pred             cCCHHHHHHHHHH-HHHccccchHHHHHHHHHHHhhChH-HHHHHHHHHHHhhcCCCCCCCccccCCChhHHHHHHHhhc
Q 013651          221 DLTLDHIKAVLMN-VFVAGADTSAATVVWAMTYLMKNPR-AMKKVQLEIRSLIGGNKGFVNEDDVQELHYLKAVVKETMR  298 (439)
Q Consensus       221 ~l~~~~i~~~~~~-~~~AG~dtt~~~l~~~l~~L~~~p~-~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lR  298 (439)
                      ++++++++++++. +.++|++||+++++|++|+|++||+ +|++|++|++.+++..++.++.+++.+||||++||+|+||
T Consensus       266 ~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLR  345 (480)
T PLN02648        266 GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALR  345 (480)
T ss_pred             CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHh
Confidence            4999999999875 3456788888899999999999995 9999999999998642456899999999999999999999


Q ss_pred             cCCCCCCCcccccccceeec----ceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCCCCcceeeec----
Q 013651          299 LQPTVPLLIPRETIQKCVID----GYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKGQHFELIPF----  370 (439)
Q Consensus       299 l~~~~~~~~~r~~~~~~~~~----g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~~~~~~~~F----  370 (439)
                      +||+++.. .|.+.+|++++    ||.||||+.|.++.+.+||||++|+||++|||+||++....   ....+++|    
T Consensus       346 l~p~v~~~-~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~  421 (480)
T PLN02648        346 IEPPVPFQ-YGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGR  421 (480)
T ss_pred             hcCCcccc-cceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCc
Confidence            99999985 48899999996    79999999999999999999999999999999999865321   11234444    


Q ss_pred             -----CCCCCCCcChhHHHHHHHHHHHHHHhhce-eecCCCC
Q 013651          371 -----GAGRRICPGLNMGIATVDLALANLLYKFD-WEMPLGI  406 (439)
Q Consensus       371 -----g~G~r~C~G~~lA~~e~~~~l~~ll~~~~-~~~~~~~  406 (439)
                           |.|+|.|+|++||++|++++++.|+++|+ |++.++.
T Consensus       422 ~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        422 ETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             ccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence                 66789999999999999999999999998 9988765


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=77.28  E-value=9  Score=23.41  Aligned_cols=43  Identities=16%  Similarity=0.205  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 013651          225 DHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEI  267 (439)
Q Consensus       225 ~~i~~~~~~~~~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei  267 (439)
                      -++..++..++-.|.|-.+-.++..+....-||+....+-.|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            4667778888888999999999888899999999998887775


No 34 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=65.00  E-value=1.9  Score=35.86  Aligned_cols=44  Identities=23%  Similarity=0.268  Sum_probs=32.7

Q ss_pred             CChhHHHHHHHhhccCCCCCCCcccccccceeecceeeCCCCEEEe
Q 013651          285 ELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFV  330 (439)
Q Consensus       285 ~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~gt~v~~  330 (439)
                      .-..+.|||.|+.-...-.-+.  =+..+|+.++|..|||||.+..
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~vr--lRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRVR--LRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEEE--EEEcCceEECCEEeCCCCEEEE
Confidence            3456678889988775544432  2557889999999999998775


No 35 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=62.68  E-value=2.6  Score=30.31  Aligned_cols=18  Identities=33%  Similarity=0.427  Sum_probs=14.7

Q ss_pred             CcceeeecCCCCCCCcCh
Q 013651          363 QHFELIPFGAGRRICPGL  380 (439)
Q Consensus       363 ~~~~~~~Fg~G~r~C~G~  380 (439)
                      .....+|||.|.-.|+|.
T Consensus       103 ~gss~~p~GaGaAaC~aA  120 (131)
T PF14459_consen  103 CGSSNNPFGAGAAACFAA  120 (131)
T ss_pred             cCcccCCcCccHHHHHHH
Confidence            345789999999999874


No 36 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=59.89  E-value=4.7  Score=25.60  Aligned_cols=23  Identities=35%  Similarity=0.608  Sum_probs=18.0

Q ss_pred             HHHHHhhChHHHHHHHHHHHHhh
Q 013651          249 AMTYLMKNPRAMKKVQLEIRSLI  271 (439)
Q Consensus       249 ~l~~L~~~p~~q~~l~~Ei~~~~  271 (439)
                      ++.+|.+||++.+++.+.=.+.+
T Consensus         5 iV~YLv~nPevl~kl~~g~asLI   27 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASLI   27 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeEe
Confidence            57899999999999986544443


No 37 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=55.53  E-value=9.9  Score=29.01  Aligned_cols=23  Identities=13%  Similarity=0.316  Sum_probs=17.3

Q ss_pred             CCCcChhHHHHHHHHHHHHHHhh
Q 013651          375 RICPGLNMGIATVDLALANLLYK  397 (439)
Q Consensus       375 r~C~G~~lA~~e~~~~l~~ll~~  397 (439)
                      -+|.|++||..++-.++..|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            47999999999999999999976


No 38 
>PRK06789 flagellar motor switch protein; Validated
Probab=54.93  E-value=14  Score=24.99  Aligned_cols=40  Identities=8%  Similarity=0.107  Sum_probs=33.1

Q ss_pred             HHHHhhccCCCCCCCcccccccc--eeecceeeCCCCEEEee
Q 013651          292 VVKETMRLQPTVPLLIPRETIQK--CVIDGYAIPAKTRVFVN  331 (439)
Q Consensus       292 ~i~E~lRl~~~~~~~~~r~~~~~--~~~~g~~ip~gt~v~~~  331 (439)
                      -++|.+.+.+-.-..+-|.+.+.  ..++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            47899999988887787888765  55699999999999875


No 39 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=53.54  E-value=5.1  Score=31.94  Aligned_cols=36  Identities=22%  Similarity=0.522  Sum_probs=26.7

Q ss_pred             CCCCCCcccccccCCCCCcceeeecCCCCCCCcChh
Q 013651          346 EEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGLN  381 (439)
Q Consensus       346 ~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~  381 (439)
                      -+|||++|-.--.+...+..+.+-|.+|+-.|-|..
T Consensus        35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence            378999986433333345668999999999999964


No 40 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=39.79  E-value=50  Score=29.63  Aligned_cols=69  Identities=17%  Similarity=0.293  Sum_probs=45.4

Q ss_pred             HHHHHHhhccCCCC---CCCcccccccceee----cceeeCCCCEEEeehhhhccCCCCCCCCCCCCCCcccccccCCCC
Q 013651          290 KAVVKETMRLQPTV---PLLIPRETIQKCVI----DGYAIPAKTRVFVNAWAIGRDPEAWENPEEFYPERFIDSCIDFKG  362 (439)
Q Consensus       290 ~a~i~E~lRl~~~~---~~~~~r~~~~~~~~----~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~f~P~Rfl~~~~~~~~  362 (439)
                      +.+++.+..+.||.   |+.+.-..+.|..+    =.-+|..||.|.++                              +
T Consensus       276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~------------------------------G  325 (361)
T COG1759         276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG------------------------------G  325 (361)
T ss_pred             HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC------------------------------C
Confidence            34788888888875   55565566666443    13578889877764                              2


Q ss_pred             CcceeeecCCCCCCCcChhHHHHHHHHHH
Q 013651          363 QHFELIPFGAGRRICPGLNMGIATVDLAL  391 (439)
Q Consensus       363 ~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l  391 (439)
                      .+++++-||.  =+-.|+.+|. |+|.++
T Consensus       326 spYs~l~~~~--pms~GrRIA~-EIk~A~  351 (361)
T COG1759         326 SPYSNLYWGE--PMSTGRRIAR-EIKEAI  351 (361)
T ss_pred             CcchhhhcCC--CcchhhHHHH-HHHHHH
Confidence            3445555544  3667999998 777665


No 41 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=39.31  E-value=6.5  Score=36.63  Aligned_cols=46  Identities=17%  Similarity=0.202  Sum_probs=33.7

Q ss_pred             CCChhHHHHHHHhhccCCCCCCCcccccccceeecceeeCCCCEEEee
Q 013651          284 QELHYLKAVVKETMRLQPTVPLLIPRETIQKCVIDGYAIPAKTRVFVN  331 (439)
Q Consensus       284 ~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~gt~v~~~  331 (439)
                      ..-..+.|||.|+.-+.-..-+.  =+..+|+.++|..|||||.|...
T Consensus       253 ~~~n~I~A~V~~~qtv~~G~~vr--lRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       253 SERNTIRACVHETQTVVDGSAVK--LRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             cCCCceEEEEcCceEEecCCEEE--EEEcCceeeCCEEecCCCEEEEE
Confidence            34667788899888776544432  24578899999999999987653


No 42 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=38.55  E-value=14  Score=22.98  Aligned_cols=10  Identities=50%  Similarity=1.089  Sum_probs=8.8

Q ss_pred             ecCCCCCCCc
Q 013651          369 PFGAGRRICP  378 (439)
Q Consensus       369 ~Fg~G~r~C~  378 (439)
                      +||-|.|.|-
T Consensus        13 kfg~GsrsC~   22 (56)
T KOG3506|consen   13 KFGQGSRSCR   22 (56)
T ss_pred             ccCCCCccee
Confidence            6999999994


No 43 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=37.92  E-value=35  Score=26.79  Aligned_cols=42  Identities=17%  Similarity=0.325  Sum_probs=28.2

Q ss_pred             ccccceeecceeeCCCCEEEeehh-------hhccCCCCCCCCCCCCCCc
Q 013651          310 ETIQKCVIDGYAIPAKTRVFVNAW-------AIGRDPEAWENPEEFYPER  352 (439)
Q Consensus       310 ~~~~~~~~~g~~ip~gt~v~~~~~-------~~~~d~~~~~dp~~f~P~R  352 (439)
                      ...+|+.++|..||+|++-++.+.       -+|.+...|.. ..+||+.
T Consensus        51 ~f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~~   99 (145)
T PF11138_consen   51 TFSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPSK   99 (145)
T ss_pred             EECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCchh
Confidence            346789999999999998776542       23555556654 4455544


No 44 
>KOG3302 consensus TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=33.69  E-value=18  Score=29.56  Aligned_cols=56  Identities=18%  Similarity=0.405  Sum_probs=35.2

Q ss_pred             CCCCCCcccccccCCCCCcceeeecCCCCCCCcC-----------hhHHHHHHHHHHHHHHhhceee
Q 013651          346 EEFYPERFIDSCIDFKGQHFELIPFGAGRRICPG-----------LNMGIATVDLALANLLYKFDWE  401 (439)
Q Consensus       346 ~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G-----------~~lA~~e~~~~l~~ll~~~~~~  401 (439)
                      -+|+|.||-----........-.-|++|+=.|-|           +++|+..-++-...-+++|++.
T Consensus        50 ~ey~Pk~~~aVimrir~P~~ta~I~ssGKi~ctgA~se~~ar~aark~aRilqkLgf~~~f~~fki~  116 (200)
T KOG3302|consen   50 AEYNPKRFAAVIMRIRSPRTTALIFSSGKIVCTGAKSEDSARLAARKYARILQKLGFPVKFRDFKIN  116 (200)
T ss_pred             cccCcccccEEEEEEcCCceEEEEecCCcEEEeccCCHHHHHHHHHHHHHHHHHcCCCceehheeeE
Confidence            5799999864322222344567789999999998           4455555555555555566544


No 45 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=33.25  E-value=1.7e+02  Score=20.49  Aligned_cols=51  Identities=14%  Similarity=0.130  Sum_probs=43.2

Q ss_pred             CCHHHHHHHHHHHHHccccchHHHHHHHHHHHhhChHHHHHHHHHHHHhhc
Q 013651          222 LTLDHIKAVLMNVFVAGADTSAATVVWAMTYLMKNPRAMKKVQLEIRSLIG  272 (439)
Q Consensus       222 l~~~~i~~~~~~~~~AG~dtt~~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~  272 (439)
                      -..+.........++--+.+++....-.+.+-++||+..+++.+.+..-+.
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            455666777778888999999999999999999999999999998877654


No 46 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=31.19  E-value=31  Score=24.08  Aligned_cols=20  Identities=20%  Similarity=0.494  Sum_probs=17.3

Q ss_pred             HHHHHHHHHHHhhceeecCC
Q 013651          385 ATVDLALANLLYKFDWEMPL  404 (439)
Q Consensus       385 ~e~~~~l~~ll~~~~~~~~~  404 (439)
                      .-|+-++..+|+-|||.|.+
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            34788899999999999986


No 47 
>cd08318 Death_NMPP84 Death domain of Nuclear Matrix Protein P84. Death domain (DD) found in the Nuclear Matrix Protein P84 (also known as HPR1 or THOC1). HPR1/p84 resides in the nuclear matrix and is part of the THO complex, also called TREX (transcription/export) complex, which functions in mRNP biogenesis at the interface between transcription and export of mRNA from the nucleus. Mice lacking THOC1 have abnormal testis development and are sterile. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=30.68  E-value=1.8e+02  Score=20.34  Aligned_cols=42  Identities=5%  Similarity=0.082  Sum_probs=30.3

Q ss_pred             CCChhHHHHHHhHhhhcCChhHHhhhh---hhHHHHHHHHHHHHHHhh
Q 013651           53 PYYEYWREIRKICVIHLFNSNRAKKFR---PIREDEVSRMMEKISKSV   97 (439)
Q Consensus        53 ~~g~~w~~~Rr~~~~~~fs~~~~~~~~---~~i~~~~~~l~~~l~~~~   97 (439)
                      .-|..|+..=+.+   .|+...+..+.   +-..+.+..++..|....
T Consensus        16 ~iG~~Wk~Lar~L---Gls~~dI~~i~~~~~~~~eq~~~mL~~W~~r~   60 (86)
T cd08318          16 KLGEDWKTLAPHL---EMKDKEIRAIESDSEDIKMQAKQLLVAWQDRE   60 (86)
T ss_pred             HHhhhHHHHHHHc---CCCHHHHHHHHhcCCCHHHHHHHHHHHHHHhc
Confidence            3488999876653   57877666543   335789999999999864


No 48 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=30.11  E-value=33  Score=25.96  Aligned_cols=21  Identities=29%  Similarity=0.232  Sum_probs=17.3

Q ss_pred             ccccceeecceeeCCCCEEEe
Q 013651          310 ETIQKCVIDGYAIPAKTRVFV  330 (439)
Q Consensus       310 ~~~~~~~~~g~~ip~gt~v~~  330 (439)
                      +++.|.+++|-.||+||.|..
T Consensus        72 I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   72 IAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             ecCCCcccCCeeecceEEEEE
Confidence            345688899999999999954


No 49 
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=29.94  E-value=19  Score=29.37  Aligned_cols=35  Identities=20%  Similarity=0.563  Sum_probs=26.2

Q ss_pred             CCCCCCcccccccCCCCCcceeeecCCCCCCCcCh
Q 013651          346 EEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGL  380 (439)
Q Consensus       346 ~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~  380 (439)
                      -+|+|+||-.--.+...+....+-|+.|+=.|.|.
T Consensus        29 ~eY~P~~fpgli~Rl~~Pk~t~lIF~SGKiv~tGa   63 (174)
T cd04518          29 AEYNPDQFPGLVYRLEDPKIAALIFRSGKMVCTGA   63 (174)
T ss_pred             cEECCCcCcEEEEEccCCcEEEEEECCCeEEEEcc
Confidence            48999998644333334556899999999999986


No 50 
>cd04516 TBP_eukaryotes eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=28.94  E-value=44  Score=27.24  Aligned_cols=34  Identities=24%  Similarity=0.630  Sum_probs=25.0

Q ss_pred             CCCCCCcccccccCCCCCcceeeecCCCCCCCcC
Q 013651          346 EEFYPERFIDSCIDFKGQHFELIPFGAGRRICPG  379 (439)
Q Consensus       346 ~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G  379 (439)
                      -+|+|++|-.--..........+-|+.|+=.|-|
T Consensus        29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTG   62 (174)
T cd04516          29 AEYNPKRFAAVIMRIREPKTTALIFSSGKMVCTG   62 (174)
T ss_pred             CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEe
Confidence            5899999864332333345578999999999998


No 51 
>PHA03162 hypothetical protein; Provisional
Probab=28.87  E-value=49  Score=25.10  Aligned_cols=26  Identities=19%  Similarity=0.427  Sum_probs=21.4

Q ss_pred             CCCCCCCcChhHHHHHHHHHHHHHHh
Q 013651          371 GAGRRICPGLNMGIATVDLALANLLY  396 (439)
Q Consensus       371 g~G~r~C~G~~lA~~e~~~~l~~ll~  396 (439)
                      ++|.+.|||+...+-|+-.=|+.|=.
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kLqm   27 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKLQL   27 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHHHH
Confidence            46999999999999988877777643


No 52 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=27.68  E-value=29  Score=22.87  Aligned_cols=15  Identities=20%  Similarity=0.589  Sum_probs=12.5

Q ss_pred             CChhHHHHHHHhhcc
Q 013651          285 ELHYLKAVVKETMRL  299 (439)
Q Consensus       285 ~lp~l~a~i~E~lRl  299 (439)
                      +..+++.+|+|++|+
T Consensus        39 r~~fv~~~IkEA~RF   53 (65)
T PF15300_consen   39 RKQFVEMIIKEAARF   53 (65)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            356788999999996


No 53 
>PRK05933 type III secretion system protein; Validated
Probab=26.64  E-value=61  Score=29.08  Aligned_cols=43  Identities=14%  Similarity=0.144  Sum_probs=34.2

Q ss_pred             HHHHHHHhhccCCCCCCCccccc---ccceeecceeeCCCCEEEee
Q 013651          289 LKAVVKETMRLQPTVPLLIPRET---IQKCVIDGYAIPAKTRVFVN  331 (439)
Q Consensus       289 l~a~i~E~lRl~~~~~~~~~r~~---~~~~~~~g~~ip~gt~v~~~  331 (439)
                      ..--|+|.++|.+..-+.+-|.+   +-|+.++|..|.+|..|.++
T Consensus       317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            44579999999988877775554   34577799999999999875


No 54 
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=24.59  E-value=65  Score=26.30  Aligned_cols=34  Identities=21%  Similarity=0.503  Sum_probs=25.2

Q ss_pred             CCCCCCcccccccCCCCCcceeeecCCCCCCCcC
Q 013651          346 EEFYPERFIDSCIDFKGQHFELIPFGAGRRICPG  379 (439)
Q Consensus       346 ~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G  379 (439)
                      -+|+|+||-.--.+...+....+-|+.|+=.|-|
T Consensus        29 ~~YePe~fpgli~R~~~P~~t~lIf~sGKivitG   62 (174)
T cd00652          29 AEYNPKRFPGVIMRLREPKTTALIFSSGKMVITG   62 (174)
T ss_pred             cEECCCccceEEEEcCCCcEEEEEECCCEEEEEe
Confidence            4889999864332333455688999999999998


No 55 
>cd08777 Death_RIP1 Death Domain of Receptor-Interacting Protein 1. Death domain (DD) found in Receptor-Interacting Protein 1 (RIP1) and related proteins. RIP kinases serve as essential sensors of cellular stress. Vertebrates contain several types containing a homologous N-terminal kinase domain and varying C-terminal domains. RIP1 harbors a C-terminal DD, which binds death receptors (DRs) including TNF receptor 1, Fas, TNF-related apoptosis-inducing ligand receptor 1 (TRAILR1), and TRAILR2. It also interacts with other DD-containing adaptor proteins such as TRADD and FADD. RIP1 plays a crucial role in determining a cell's fate, between survival or death, following exposure to stress signals. It is important in the signaling of NF-kappaB and MAPKs, and it links DR-associated signaling to reactive oxygen species (ROS) production. Abnormal RIP1 function may result in ROS accumulation affecting inflammatory responses, innate immunity, stress responses, and cell survival. In general, DDs ar
Probab=24.35  E-value=2.6e+02  Score=19.65  Aligned_cols=42  Identities=12%  Similarity=0.195  Sum_probs=31.7

Q ss_pred             CCChhHHHHHHhHhhhcCChhHHhhhhhh-----HHHHHHHHHHHHHHhh
Q 013651           53 PYYEYWREIRKICVIHLFNSNRAKKFRPI-----REDEVSRMMEKISKSV   97 (439)
Q Consensus        53 ~~g~~w~~~Rr~~~~~~fs~~~~~~~~~~-----i~~~~~~l~~~l~~~~   97 (439)
                      .-|..|+..=|.+   .|+...++.++.-     +.+.+..++..|....
T Consensus        11 ~lG~~Wk~lar~L---G~s~~eI~~ie~~~~r~~~~eq~~~mL~~W~~r~   57 (86)
T cd08777          11 NLGKKWKRCARKL---GFTESEIEEIDHDYERDGLKEKVHQMLHKWKMKE   57 (86)
T ss_pred             HHHHHHHHHHHHc---CCCHHHHHHHHHhcccCCHHHHHHHHHHHHHHcc
Confidence            3488999887763   5888888776532     5688999999999864


No 56 
>COG1886 FliN Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=24.10  E-value=78  Score=24.60  Aligned_cols=41  Identities=15%  Similarity=0.117  Sum_probs=33.4

Q ss_pred             HHHHHhhccCCCCCCCccccccccee--ecceeeCCCCEEEee
Q 013651          291 AVVKETMRLQPTVPLLIPRETIQKCV--IDGYAIPAKTRVFVN  331 (439)
Q Consensus       291 a~i~E~lRl~~~~~~~~~r~~~~~~~--~~g~~ip~gt~v~~~  331 (439)
                      --+.|.+++.+-.-+.+.+.+...+.  ++|+.|-+|..|.+.
T Consensus        84 ~~l~ell~l~~Gsvi~Ld~~~~~~VdI~vNg~~Ig~GEvVvvd  126 (136)
T COG1886          84 MPLGELLALGKGSVIELDKLAGEPVDILVNGRLIGRGEVVVVD  126 (136)
T ss_pred             eeHHHHHhcCCCCEEEcCCcCCCceEEEECCEEEEEEeEEEEC
Confidence            45889999998877778788876654  599999999999874


No 57 
>smart00549 TAFH TAF homology. Domain in Drosophila nervy, CBFA2T1, human TAF105, human TAF130, and Drosophila TAF110. Also known as nervy homology region 1 (NHR1).
Probab=23.22  E-value=2.8e+02  Score=19.73  Aligned_cols=64  Identities=19%  Similarity=0.285  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHhhcCCCceehHHHHHHHHHHHHHHHhcccccccCcCCcchhhHHHHHHhhhcccccccccchhh
Q 013651           84 DEVSRMMEKISKSVAASNPVNVSEVMMSLTSTIICRIGFGKRYDEDKATSGRSRFHTLLNETLVSFFVPDYFPLIG  159 (439)
Q Consensus        84 ~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~  159 (439)
                      +.+.+++..+...+.++...++..-++.++.+++.    |    ..    +.++|...+.+.+....-++.+|+++
T Consensus         3 ~K~k~FL~tLi~ls~~~~qpe~~~~Vr~LV~~L~~----~----~i----~~EeF~~~Lq~~lns~~qP~lvPFLK   66 (92)
T smart00549        3 SKCKRFLTTLIQLSNDISQPEVAERVRTLVLGLVN----G----TI----TAEEFTSRLQEALNSPLQPYLIPFLK   66 (92)
T ss_pred             HHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHh----C----CC----CHHHHHHHHHHHHcCCCCchhHHHHH
Confidence            45677777777765554446677777766665552    2    11    56788888888877666777777765


No 58 
>PRK00394 transcription factor; Reviewed
Probab=22.17  E-value=33  Score=28.10  Aligned_cols=34  Identities=24%  Similarity=0.597  Sum_probs=25.5

Q ss_pred             CCCCCCcccccccCCCCCcceeeecCCCCCCCcC
Q 013651          346 EEFYPERFIDSCIDFKGQHFELIPFGAGRRICPG  379 (439)
Q Consensus       346 ~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G  379 (439)
                      -+|+|+||-.--.+...+....+-|+.|+=.|.|
T Consensus        28 ~eYePe~fpgli~Rl~~Pk~t~lIf~sGKiv~tG   61 (179)
T PRK00394         28 AEYNPEQFPGLVYRLEDPKIAALIFRSGKVVCTG   61 (179)
T ss_pred             ceeCcccCceEEEEecCCceEEEEEcCCcEEEEc
Confidence            4899999864333333455689999999999998


No 59 
>KOG4189 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.59  E-value=4.7e+02  Score=21.70  Aligned_cols=49  Identities=18%  Similarity=0.172  Sum_probs=39.3

Q ss_pred             CCHHHHHHHHHHHHHccccchH--HHHHHHHHHHhhChHHHHHHHHHHHHh
Q 013651          222 LTLDHIKAVLMNVFVAGADTSA--ATVVWAMTYLMKNPRAMKKVQLEIRSL  270 (439)
Q Consensus       222 l~~~~i~~~~~~~~~AG~dtt~--~~l~~~l~~L~~~p~~q~~l~~Ei~~~  270 (439)
                      -+..++...+.+=.+|-|++-+  .+..-++|.|...|+.+.+|.++++..
T Consensus       128 ~s~~diakesYd~~lakhHsW~IRtAV~~amYtLPTR~~lL~~Lk~d~~~~  178 (209)
T KOG4189|consen  128 ESLKDIAKESYDKTLAKHHSWAIRTAVAAAMYTLPTRPELLCRLKEDMDAA  178 (209)
T ss_pred             chhhHHHHHHHHHhhhccccHHHHHHHHHHHHhCCCcHHHHHHHHhHHHHH
Confidence            4556777777777888888765  456678999999999999999998665


No 60 
>PLN00062 TATA-box-binding protein; Provisional
Probab=21.19  E-value=32  Score=28.18  Aligned_cols=55  Identities=18%  Similarity=0.430  Sum_probs=33.4

Q ss_pred             CCCCCCcccccccCCCCCcceeeecCCCCCCCcCh-hHHHHH-HHHHHHHHHhhcee
Q 013651          346 EEFYPERFIDSCIDFKGQHFELIPFGAGRRICPGL-NMGIAT-VDLALANLLYKFDW  400 (439)
Q Consensus       346 ~~f~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~-~lA~~e-~~~~l~~ll~~~~~  400 (439)
                      -+|+|+||-.--.+........+-|+.|+=.|-|. .-.... ..--++.+|++..+
T Consensus        29 ~eYePe~fpgli~Rl~~Pk~t~lIF~SGKiviTGaks~e~a~~a~~~~~~~L~~lg~   85 (179)
T PLN00062         29 AEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEHDSKLAARKYARIIQKLGF   85 (179)
T ss_pred             CEECCccCcEEEEEeCCCcEEEEEECCCeEEEEecCCHHHHHHHHHHHHHHHHHcCC
Confidence            58999998643333334456799999999999984 332221 22233345555443


No 61 
>PF04798 Baculo_19:  Baculovirus 19 kDa protein conserved region;  InterPro: IPR006883 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf96; it is a family of uncharacterised viral proteins.
Probab=21.07  E-value=38  Score=26.35  Aligned_cols=24  Identities=13%  Similarity=0.422  Sum_probs=18.1

Q ss_pred             CcceeeecCCCCCCCcChhHHHHHH
Q 013651          363 QHFELIPFGAGRRICPGLNMGIATV  387 (439)
Q Consensus       363 ~~~~~~~Fg~G~r~C~G~~lA~~e~  387 (439)
                      .-+.|+- |++.|.||+..+|..-+
T Consensus        56 ~lYyYle-gss~~~CP~nE~avVrf   79 (146)
T PF04798_consen   56 TLYYYLE-GSSSVFCPPNEFAVVRF   79 (146)
T ss_pred             eEEEEEe-ccccccCCCCceEEEEE
Confidence            3466778 89999999888775443


No 62 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=20.40  E-value=55  Score=27.46  Aligned_cols=20  Identities=30%  Similarity=0.802  Sum_probs=17.3

Q ss_pred             hhhccCCCCCCCCCCCCCCc
Q 013651          333 WAIGRDPEAWENPEEFYPER  352 (439)
Q Consensus       333 ~~~~~d~~~~~dp~~f~P~R  352 (439)
                      +..|.|+.+|.|...|+|-|
T Consensus       192 ~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccccCccccCCCC
Confidence            34488999999999999988


No 63 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=20.07  E-value=1.9e+02  Score=16.64  Aligned_cols=12  Identities=8%  Similarity=0.371  Sum_probs=9.5

Q ss_pred             hhChHHHHHHHH
Q 013651          254 MKNPRAMKKVQL  265 (439)
Q Consensus       254 ~~~p~~q~~l~~  265 (439)
                      -+||++++.++.
T Consensus        24 ~~HPei~~~i~~   35 (38)
T PF14483_consen   24 ERHPEIQQEIRS   35 (38)
T ss_dssp             HHSTHHHHHHHT
T ss_pred             HhChhHHHHHHh
Confidence            379999988864


Done!