Query 013652
Match_columns 439
No_of_seqs 364 out of 2459
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 06:02:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013652.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013652hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07418 MPP_PP7 PP7, metalloph 100.0 1E-81 2.2E-86 636.6 36.8 377 50-430 1-377 (377)
2 KOG0372 Serine/threonine speci 100.0 2.7E-78 5.9E-83 564.2 19.3 284 82-431 14-301 (303)
3 cd07420 MPP_RdgC Drosophila me 100.0 3.1E-72 6.8E-77 559.4 31.5 300 56-417 2-321 (321)
4 cd07417 MPP_PP5_C PP5, C-termi 100.0 7.3E-71 1.6E-75 550.3 29.0 311 45-429 3-313 (316)
5 KOG0373 Serine/threonine speci 100.0 5.5E-70 1.2E-74 501.3 19.6 281 82-427 17-297 (306)
6 cd07416 MPP_PP2B PP2B, metallo 100.0 3.2E-67 7E-72 522.6 29.1 292 61-427 3-304 (305)
7 PTZ00239 serine/threonine prot 100.0 1E-66 2.2E-71 517.3 29.4 273 83-420 15-287 (303)
8 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 8.2E-67 1.8E-71 514.9 28.4 271 83-419 14-284 (285)
9 PTZ00480 serine/threonine-prot 100.0 4.2E-66 9E-71 514.8 29.0 271 82-419 30-301 (320)
10 KOG0374 Serine/threonine speci 100.0 1.4E-66 3E-71 520.0 25.4 270 83-421 31-302 (331)
11 PTZ00244 serine/threonine-prot 100.0 2.5E-65 5.4E-70 505.8 27.8 270 82-418 23-293 (294)
12 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 8.1E-65 1.8E-69 502.5 27.2 269 82-417 21-290 (293)
13 smart00156 PP2Ac Protein phosp 100.0 2E-64 4.4E-69 495.5 27.1 268 84-418 1-269 (271)
14 KOG0377 Protein serine/threoni 100.0 1.5E-65 3.1E-70 509.4 13.8 313 44-422 108-435 (631)
15 KOG0375 Serine-threonine phosp 100.0 4.1E-65 8.9E-70 496.2 16.5 283 83-427 60-349 (517)
16 cd07419 MPP_Bsu1_C Arabidopsis 100.0 2.7E-62 5.8E-67 489.1 28.2 278 78-416 15-309 (311)
17 KOG0371 Serine/threonine prote 100.0 1.5E-62 3.2E-67 461.4 14.7 272 82-419 31-302 (319)
18 KOG0376 Serine-threonine phosp 100.0 8.2E-62 1.8E-66 493.0 14.7 363 1-435 102-472 (476)
19 cd00144 MPP_PPP_family phospho 100.0 3.5E-32 7.6E-37 258.6 20.2 217 119-402 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 99.9 3.3E-26 7.2E-31 222.1 16.5 125 116-242 1-145 (245)
21 cd07413 MPP_PA3087 Pseudomonas 99.9 6.2E-25 1.3E-29 210.2 15.5 118 119-240 2-143 (222)
22 cd07423 MPP_PrpE Bacillus subt 99.9 5.3E-25 1.1E-29 212.1 14.7 123 116-241 1-141 (234)
23 PRK11439 pphA serine/threonine 99.9 5.7E-24 1.2E-28 202.9 14.6 128 106-240 8-146 (218)
24 PRK00166 apaH diadenosine tetr 99.9 1.7E-24 3.7E-29 213.0 10.2 122 116-243 1-127 (275)
25 cd07421 MPP_Rhilphs Rhilph pho 99.9 3.1E-23 6.6E-28 203.4 14.8 75 117-191 3-83 (304)
26 cd07422 MPP_ApaH Escherichia c 99.9 1.1E-23 2.4E-28 205.3 10.0 120 118-243 1-125 (257)
27 cd07424 MPP_PrpA_PrpB PrpA and 99.9 8.4E-23 1.8E-27 193.2 15.2 120 116-241 1-131 (207)
28 cd07425 MPP_Shelphs Shewanella 99.9 4.4E-23 9.4E-28 195.6 12.8 122 119-241 1-139 (208)
29 TIGR00668 apaH bis(5'-nucleosy 99.9 2.9E-22 6.2E-27 196.2 11.7 122 116-244 1-128 (279)
30 PRK09968 serine/threonine-spec 99.9 8.5E-22 1.8E-26 188.0 13.3 128 106-240 6-144 (218)
31 PHA02239 putative protein phos 99.9 1.3E-21 2.9E-26 188.6 11.9 125 116-242 1-168 (235)
32 KOG0376 Serine-threonine phosp 99.6 2.7E-16 6E-21 161.1 -2.2 332 78-429 9-343 (476)
33 PF00149 Metallophos: Calcineu 99.3 2.4E-11 5.2E-16 105.8 9.5 77 116-192 1-82 (200)
34 PRK09453 phosphodiesterase; Pr 99.0 6.7E-10 1.4E-14 102.9 9.0 69 116-189 1-77 (182)
35 cd00841 MPP_YfcE Escherichia c 98.9 8.3E-09 1.8E-13 92.5 8.3 59 117-188 1-59 (155)
36 PF12850 Metallophos_2: Calcin 98.8 5.2E-08 1.1E-12 86.5 12.9 61 116-189 1-61 (156)
37 TIGR00040 yfcE phosphoesterase 98.8 2.2E-08 4.7E-13 90.5 7.7 64 116-188 1-64 (158)
38 cd07379 MPP_239FB Homo sapiens 98.6 5.4E-07 1.2E-11 79.2 12.6 61 117-188 1-63 (135)
39 cd07397 MPP_DevT Myxococcus xa 98.6 1.7E-07 3.7E-12 90.6 9.5 111 117-240 2-158 (238)
40 cd07388 MPP_Tt1561 Thermus the 98.6 3.1E-07 6.8E-12 88.2 10.3 71 116-188 5-75 (224)
41 COG0639 ApaH Diadenosine tetra 98.5 2.3E-07 5E-12 80.6 7.1 146 190-385 3-154 (155)
42 cd07392 MPP_PAE1087 Pyrobaculu 98.5 4.7E-06 1E-10 76.3 14.7 64 118-188 1-65 (188)
43 PF08321 PPP5: PPP5 TPR repeat 98.5 4.5E-08 9.8E-13 81.5 0.8 86 14-109 5-95 (95)
44 cd00838 MPP_superfamily metall 98.4 2E-06 4.4E-11 72.6 10.0 67 119-186 1-69 (131)
45 cd07394 MPP_Vps29 Homo sapiens 98.2 4.4E-06 9.5E-11 77.5 7.2 59 117-188 1-65 (178)
46 PRK05340 UDP-2,3-diacylglucosa 98.1 9.2E-06 2E-10 78.6 8.1 70 116-188 1-83 (241)
47 COG0622 Predicted phosphoester 98.1 0.00012 2.6E-09 67.6 15.0 65 116-189 2-66 (172)
48 cd07403 MPP_TTHA0053 Thermus t 98.0 3.3E-05 7.1E-10 67.8 9.9 55 120-186 2-56 (129)
49 PRK11340 phosphodiesterase Yae 98.0 1.7E-05 3.6E-10 78.3 8.6 72 114-188 48-125 (271)
50 cd07385 MPP_YkuE_C Bacillus su 98.0 1.1E-05 2.3E-10 76.4 6.1 70 116-188 2-76 (223)
51 cd07404 MPP_MS158 Microscilla 97.9 7.1E-06 1.5E-10 74.4 3.9 67 118-188 1-68 (166)
52 cd07399 MPP_YvnB Bacillus subt 97.9 0.00079 1.7E-08 64.1 17.6 69 117-187 2-81 (214)
53 cd07400 MPP_YydB Bacillus subt 97.9 0.00011 2.3E-09 64.8 10.3 68 118-187 1-80 (144)
54 cd07391 MPP_PF1019 Pyrococcus 97.7 6.3E-05 1.4E-09 69.0 6.7 55 132-188 31-88 (172)
55 TIGR03729 acc_ester putative p 97.7 8E-05 1.7E-09 71.9 6.5 68 117-188 1-74 (239)
56 TIGR01854 lipid_A_lpxH UDP-2,3 97.6 0.00014 3.1E-09 69.9 7.7 68 118-188 1-81 (231)
57 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.6 0.00012 2.6E-09 72.1 6.8 69 118-188 1-86 (262)
58 cd07396 MPP_Nbla03831 Homo sap 97.6 0.0002 4.4E-09 70.3 7.6 73 117-190 2-88 (267)
59 PHA02546 47 endonuclease subun 97.5 0.00019 4.2E-09 73.2 6.9 72 116-188 1-89 (340)
60 cd07390 MPP_AQ1575 Aquifex aeo 97.5 0.00028 6.2E-09 64.5 7.0 41 145-190 44-84 (168)
61 COG2129 Predicted phosphoester 97.5 0.016 3.5E-07 55.3 18.7 179 115-346 3-184 (226)
62 TIGR00619 sbcd exonuclease Sbc 97.4 0.00036 7.9E-09 68.2 6.7 72 116-188 1-88 (253)
63 PRK11148 cyclic 3',5'-adenosin 97.4 0.00055 1.2E-08 67.5 7.9 73 114-188 13-98 (275)
64 cd07398 MPP_YbbF-LpxH Escheric 97.3 0.0004 8.7E-09 65.4 6.2 23 325-347 177-199 (217)
65 cd07402 MPP_GpdQ Enterobacter 97.3 0.00066 1.4E-08 64.9 7.5 70 117-188 1-83 (240)
66 PRK10966 exonuclease subunit S 97.2 0.00063 1.4E-08 71.1 7.2 71 116-188 1-87 (407)
67 PRK04036 DNA polymerase II sma 97.2 0.0014 3.1E-08 70.3 9.5 115 115-239 243-388 (504)
68 cd00840 MPP_Mre11_N Mre11 nucl 97.2 0.00072 1.6E-08 63.5 6.3 73 117-190 1-91 (223)
69 cd08163 MPP_Cdc1 Saccharomyces 97.2 0.032 7E-07 54.8 17.9 23 324-346 203-225 (257)
70 TIGR00583 mre11 DNA repair pro 97.1 0.0016 3.4E-08 68.0 8.0 75 114-189 2-124 (405)
71 cd07383 MPP_Dcr2 Saccharomyces 97.1 0.0018 3.9E-08 60.6 7.6 70 116-186 3-87 (199)
72 TIGR00024 SbcD_rel_arch putati 97.0 0.0018 4E-08 62.3 7.2 68 117-189 16-103 (225)
73 cd08165 MPP_MPPE1 human MPPE1 97.0 0.00096 2.1E-08 60.5 4.7 45 145-189 40-90 (156)
74 cd07393 MPP_DR1119 Deinococcus 96.8 0.0023 5E-08 61.6 6.3 69 118-188 1-84 (232)
75 COG1409 Icc Predicted phosphoh 96.7 0.0047 1E-07 60.1 7.8 72 116-190 1-80 (301)
76 cd07401 MPP_TMEM62_N Homo sapi 96.6 0.0069 1.5E-07 59.3 7.8 70 118-188 2-89 (256)
77 cd07395 MPP_CSTP1 Homo sapiens 96.5 0.0079 1.7E-07 58.6 7.5 73 116-188 5-99 (262)
78 cd00845 MPP_UshA_N_like Escher 96.5 0.0045 9.8E-08 59.8 5.6 67 117-188 2-82 (252)
79 COG0420 SbcD DNA repair exonuc 96.5 0.0059 1.3E-07 63.3 6.7 74 116-190 1-90 (390)
80 cd07380 MPP_CWF19_N Schizosacc 96.3 0.0078 1.7E-07 54.4 6.0 67 119-186 1-68 (150)
81 cd00839 MPP_PAPs purple acid p 96.3 0.0082 1.8E-07 59.3 6.7 71 115-190 4-83 (294)
82 COG1408 Predicted phosphohydro 96.2 0.011 2.3E-07 59.0 6.9 73 114-189 43-119 (284)
83 COG2908 Uncharacterized protei 96.2 0.015 3.3E-07 56.1 7.5 100 120-241 2-117 (237)
84 cd07386 MPP_DNA_pol_II_small_a 96.1 0.017 3.7E-07 55.9 7.4 69 119-189 2-95 (243)
85 KOG3662 Cell division control 96.0 0.02 4.2E-07 59.5 7.7 84 114-204 47-153 (410)
86 cd08166 MPP_Cdc1_like_1 unchar 96.0 0.011 2.4E-07 55.7 5.2 43 146-188 45-93 (195)
87 cd07384 MPP_Cdc1_like Saccharo 96.0 0.013 2.8E-07 53.9 5.6 45 145-189 47-101 (171)
88 COG4186 Predicted phosphoester 95.9 0.041 8.9E-07 49.8 8.0 70 117-190 5-88 (186)
89 cd08164 MPP_Ted1 Saccharomyces 95.7 0.021 4.5E-07 53.8 5.7 66 123-188 24-111 (193)
90 COG1407 Predicted ICC-like pho 95.6 0.02 4.3E-07 55.3 5.6 77 116-195 20-117 (235)
91 cd07410 MPP_CpdB_N Escherichia 94.9 0.033 7.1E-07 54.9 4.8 66 117-187 2-94 (277)
92 PF14582 Metallophos_3: Metall 94.7 0.038 8.2E-07 53.1 4.2 73 116-189 6-103 (255)
93 PLN02533 probable purple acid 94.1 0.066 1.4E-06 56.4 5.0 70 116-189 140-212 (427)
94 cd07412 MPP_YhcR_N Bacillus su 94.0 0.068 1.5E-06 53.2 4.7 67 117-188 2-88 (288)
95 cd07411 MPP_SoxB_N Thermus the 93.4 0.15 3.2E-06 50.0 5.7 66 117-188 2-95 (264)
96 cd07408 MPP_SA0022_N Staphyloc 93.3 0.15 3.2E-06 49.8 5.5 65 117-187 2-81 (257)
97 COG1311 HYS2 Archaeal DNA poly 93.1 2.8 6.1E-05 44.5 14.9 75 116-190 226-323 (481)
98 cd07378 MPP_ACP5 Homo sapiens 92.8 0.22 4.8E-06 48.7 6.0 70 117-188 2-83 (277)
99 KOG2863 RNA lariat debranching 92.3 0.25 5.4E-06 50.3 5.6 72 116-188 1-88 (456)
100 TIGR00282 metallophosphoestera 91.7 0.31 6.7E-06 48.2 5.6 68 116-188 1-71 (266)
101 PF06874 FBPase_2: Firmicute f 90.2 0.32 7E-06 52.9 4.3 42 146-192 187-228 (640)
102 cd07409 MPP_CD73_N CD73 ecto-5 90.1 0.58 1.3E-05 46.4 5.9 67 117-188 2-94 (281)
103 cd07406 MPP_CG11883_N Drosophi 89.0 0.71 1.5E-05 45.1 5.5 66 117-187 2-82 (257)
104 PRK09419 bifunctional 2',3'-cy 88.4 0.6 1.3E-05 55.4 5.2 67 116-187 661-735 (1163)
105 COG1768 Predicted phosphohydro 88.0 0.91 2E-05 42.3 5.0 43 143-189 43-87 (230)
106 cd00842 MPP_ASMase acid sphing 87.2 1.1 2.4E-05 44.4 5.6 63 129-191 53-125 (296)
107 KOG0918 Selenium-binding prote 87.1 0.027 5.9E-07 57.8 -5.9 93 145-243 49-142 (476)
108 KOG1432 Predicted DNA repair e 87.0 2.2 4.7E-05 43.5 7.5 44 145-189 102-148 (379)
109 cd07407 MPP_YHR202W_N Saccharo 85.0 1.1 2.3E-05 44.7 4.2 67 117-188 7-97 (282)
110 cd07382 MPP_DR1281 Deinococcus 83.3 2.5 5.4E-05 41.6 5.8 67 117-188 1-70 (255)
111 KOG2476 Uncharacterized conser 83.2 2.4 5.2E-05 44.7 5.9 69 116-185 6-75 (528)
112 KOG3325 Membrane coat complex 82.4 2.3 5E-05 38.4 4.7 63 117-188 2-66 (183)
113 cd08162 MPP_PhoA_N Synechococc 82.2 2.1 4.5E-05 43.3 5.0 66 117-187 2-90 (313)
114 PRK09420 cpdB bifunctional 2', 81.2 2.2 4.7E-05 47.6 5.1 67 117-188 27-122 (649)
115 cd07405 MPP_UshA_N Escherichia 79.9 2 4.4E-05 42.7 4.0 67 117-188 2-87 (285)
116 TIGR01390 CycNucDiestase 2',3' 79.6 2.5 5.4E-05 46.9 4.9 67 117-188 4-99 (626)
117 COG0737 UshA 5'-nucleotidase/2 78.3 2.7 5.9E-05 45.3 4.7 67 117-188 28-115 (517)
118 cd07387 MPP_PolD2_C PolD2 (DNA 75.5 87 0.0019 30.9 18.1 47 146-192 45-111 (257)
119 COG3855 Fbp Uncharacterized pr 75.5 4.1 8.8E-05 43.1 4.7 42 146-192 193-234 (648)
120 PRK09419 bifunctional 2',3'-cy 75.3 3.5 7.5E-05 49.1 4.8 66 117-187 43-138 (1163)
121 PRK11907 bifunctional 2',3'-cy 74.8 4.1 8.9E-05 46.5 5.0 66 117-187 117-212 (814)
122 PF04042 DNA_pol_E_B: DNA poly 74.7 4.6 0.0001 37.7 4.6 72 118-190 1-93 (209)
123 TIGR01530 nadN NAD pyrophospha 74.5 5.5 0.00012 43.4 5.7 67 117-188 2-94 (550)
124 PRK09418 bifunctional 2',3'-cy 64.2 9.5 0.00021 43.4 5.0 66 117-187 41-141 (780)
125 PTZ00422 glideosome-associated 61.4 14 0.0003 38.7 5.2 73 116-188 27-109 (394)
126 PRK09558 ushA bifunctional UDP 59.0 10 0.00022 41.3 3.9 67 117-188 36-121 (551)
127 KOG3947 Phosphoesterases [Gene 58.6 14 0.00031 36.6 4.5 69 113-190 59-128 (305)
128 PTZ00235 DNA polymerase epsilo 57.7 33 0.00071 34.4 6.9 76 113-188 25-122 (291)
129 KOG1378 Purple acid phosphatas 57.4 15 0.00032 39.0 4.6 72 115-192 147-225 (452)
130 KOG3339 Predicted glycosyltran 50.9 43 0.00094 31.5 6.0 85 145-237 40-140 (211)
131 KOG2310 DNA repair exonuclease 50.2 46 0.001 36.2 6.8 55 115-170 13-79 (646)
132 PF13258 DUF4049: Domain of un 45.6 1.4E+02 0.003 29.3 8.7 121 87-241 58-186 (318)
133 PF02875 Mur_ligase_C: Mur lig 33.7 67 0.0014 25.7 4.1 69 117-185 13-82 (91)
134 PF15007 CEP44: Centrosomal sp 29.0 42 0.0009 29.7 2.2 85 123-226 1-88 (131)
135 KOG2679 Purple (tartrate-resis 28.8 68 0.0015 32.1 3.8 73 115-188 43-126 (336)
136 PF06874 FBPase_2: Firmicute f 26.1 48 0.001 36.6 2.5 43 325-379 507-553 (640)
137 PF03494 Beta-APP: Beta-amyloi 24.7 58 0.0013 22.2 1.8 28 361-403 4-31 (39)
138 COG3792 Uncharacterized protei 24.0 21 0.00046 31.0 -0.5 29 121-157 26-60 (122)
139 COG1692 Calcineurin-like phosp 22.1 2.1E+02 0.0046 28.2 5.8 67 116-187 1-70 (266)
140 PF14164 YqzH: YqzH-like prote 21.7 3.8E+02 0.0083 20.8 6.0 45 57-105 2-47 (64)
No 1
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=1e-81 Score=636.62 Aligned_cols=377 Identities=72% Similarity=1.250 Sum_probs=331.9
Q ss_pred CCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHH
Q 013652 50 YPEDGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLH 129 (439)
Q Consensus 50 ~p~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~ 129 (439)
||..+.||.+|+++|++.|++..+++.+.++...++.+++.+||.+|+++|++||++++|+. +...+++||||||||+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~-~~~~~i~VvGDIHG~~~ 79 (377)
T cd07418 1 WPDGGALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDV-EDVCEVVVVGDVHGQLH 79 (377)
T ss_pred CCCCCccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecC-CCCCCEEEEEecCCCHH
Confidence 78888899999999999999999999999999999999999999999999999999999985 33459999999999999
Q ss_pred HHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcch
Q 013652 130 DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGK 209 (439)
Q Consensus 130 dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~ 209 (439)
+|+++|+..++++.+..|||||||||||++|+||+.+|++||+.+|.+|++||||||.+.++..|||..|+..+|+..+.
T Consensus 80 dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~ 159 (377)
T cd07418 80 DVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGK 159 (377)
T ss_pred HHHHHHHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHH
Confidence 99999999999887777999999999999999999999999999999999999999999999999999999999987667
Q ss_pred HHHHHHhhhhcCCCceeeecCcEEeeccCCCCcccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCC
Q 013652 210 HAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWN 289 (439)
Q Consensus 210 ~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~ 289 (439)
.+|+.++++|++||+++++++++|||||||++...+.......+++..............+.++++|++++|+..+++..
T Consensus 160 ~l~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~ 239 (377)
T cd07418 160 HVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGE 239 (377)
T ss_pred HHHHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCC
Confidence 89999999999999999999999999999987553322111111111001111112234678999999999987666544
Q ss_pred CCCCCCCCCCccccCCCCccCCCCCcCCCCCceeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeecc
Q 013652 290 PQLSSNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHD 369 (439)
Q Consensus 290 ~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~ 369 (439)
+.+.+++|+|||||....|+.+|++||.|+.||++++++||++|++++||||||+++++++|.++..+.+||++.|+
T Consensus 240 ---~~~~i~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~ 316 (377)
T cd07418 240 ---GSNLIPGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHD 316 (377)
T ss_pred ---CccccceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEecc
Confidence 44456899999999998999999889999999999999999999999999999999999999999999999999886
Q ss_pred CCCCeEEEEEcCCCCCCcccccccCCCcEEEEEEcCCCCCCCcEEEEEecCCCCCCccccc
Q 013652 370 VESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVRCLLV 430 (439)
Q Consensus 370 ~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~l~i~~~~~~~~~~~~f~~~~~~~~~~p~~~ 430 (439)
.++|+|+|||||||||+++++++.++|+||+++|+.+++.+|+|+||+|++|||+..||++
T Consensus 317 ~~~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (377)
T cd07418 317 VESGKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPRPKANPYYD 377 (377)
T ss_pred CCCCcEEEEecCCccccccccccccCcceEEEEEecCCCCCccceEeeccCCCCCCCcCCC
Confidence 5679999999999999888887889999999999988888999999999999999999953
No 2
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-78 Score=564.23 Aligned_cols=284 Identities=39% Similarity=0.611 Sum_probs=262.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChH
Q 013652 82 SVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL 161 (439)
Q Consensus 82 ~~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~ 161 (439)
..+++.++..||.+++++|.+|+|++++++ |++|||||||||+||+.+|+..|.++.++ |+|||||||||.+|+
T Consensus 14 ~li~E~eV~~LC~~~~eiL~~E~NV~~i~t-----PvtvcGDIHGQf~Dllelf~igG~~~~t~-YLFLGDyVDRG~~Sv 87 (303)
T KOG0372|consen 14 ELIAESEVKALCAKVREILVEESNVQRIDT-----PVTVCGDIHGQFYDLLELFRIGGDVPETN-YLFLGDYVDRGYYSV 87 (303)
T ss_pred CCCcHHHHHHHHHHHHHHHhcCCCceecCC-----CcEEeecccchHHHHHHHHHhCCCCCCCc-eEeecchhccccchH
Confidence 468899999999999999999999999998 99999999999999999999999888877 999999999999999
Q ss_pred HHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCCC
Q 013652 162 ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFR 241 (439)
Q Consensus 162 evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~ 241 (439)
|++.+|++||++||++|++||||||++.+++.|||++||.+|||. .++|+.+.+.|+.||++|+|+++|||||||+||
T Consensus 88 Et~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~--~~vWr~c~eiFdyL~l~aiid~kifCVHGGlSP 165 (303)
T KOG0372|consen 88 ETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS--ANVWRYCTEIFDYLSLAAIIDGKIFCVHGGLSP 165 (303)
T ss_pred HHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCC--hHHHHHHHHHHHhhhHhheecCcEEEEcCCCCc
Confidence 999999999999999999999999999999999999999999995 599999999999999999999999999999999
Q ss_pred cccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCccCCCCCcCCCCCc
Q 013652 242 SVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGIG 321 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g 321 (439)
++ .++|+|+.++|...- | ....++|+|||||.+.+||..+ +||+|
T Consensus 166 ~i---------------------------~~lDqIr~lDR~~Ei-p------h~g~m~DllWSDPee~~g~~~S-PRGaG 210 (303)
T KOG0372|consen 166 SI---------------------------QTLDQIRVLDRKQEV-P------HDGAMCDLLWSDPEEGPGWGLS-PRGAG 210 (303)
T ss_pred ch---------------------------hhHHHHHHhhccccC-C------CCCcchheeccCcccCCCcccC-CCCcc
Confidence 65 789999999997633 2 2336999999999999999986 89999
Q ss_pred eeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEEE
Q 013652 322 LLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYI 401 (439)
Q Consensus 322 ~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~l 401 (439)
++||.++++.||+.||+.+|+|+||- +.+||++.+ +++|+||||||||| ++.+|.||+|
T Consensus 211 ylFG~dvv~~F~~~N~~~~I~RaHQL------------v~eGyk~~F---~~~v~TVWSAPNYC------YrCGN~AsIl 269 (303)
T KOG0372|consen 211 YLFGEDVVESFLEANGLSLICRAHQL------------VMEGYKWHF---DEKVVTVWSAPNYC------YRCGNVAAIL 269 (303)
T ss_pred ccccHHHHHHHHHhCChHHHHHHHHH------------HHhhHHHhc---CCceEEEecCCchh------hhcCChHHhe
Confidence 99999999999999999999999994 789999976 49999999999999 7999999999
Q ss_pred EEcCCCCCCCcEEEEEecC----CCCCCcccccc
Q 013652 402 VLKPPKFDIPDFNVFEAVT----PRPDVRCLLVY 431 (439)
Q Consensus 402 ~i~~~~~~~~~~~~f~~~~----~~~~~~p~~~~ 431 (439)
.|++. ....|..|+|.+ ..|.-+|.++|
T Consensus 270 ~lde~--~~~~F~vFeaa~~~~~~~~~kk~~~~y 301 (303)
T KOG0372|consen 270 ELDED--LDKDFRVFEAAPQESRGIPAKKPIADY 301 (303)
T ss_pred eeccc--cCcceEeeecchhhhcCCcccCcchhh
Confidence 99976 588899999986 34556776655
No 3
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=3.1e-72 Score=559.45 Aligned_cols=300 Identities=37% Similarity=0.602 Sum_probs=265.0
Q ss_pred CCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHH
Q 013652 56 LTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLL 135 (439)
Q Consensus 56 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il 135 (439)
||.+.++.+++.+... ..|+++++.+||++|+++|++||++++|+. +...+++||||||||+++|+++|
T Consensus 2 ~~~~~~~~~i~~~~~~----------~~l~~~~i~~L~~~a~~il~~ep~vl~i~~-~~~~~~~vvGDiHG~~~dL~~il 70 (321)
T cd07420 2 LTKDHIDALIEAFKEK----------QLLHAKYVLLILREARKVLKQLPNISRVST-SISKQVTICGDLHGKLDDLFLIF 70 (321)
T ss_pred CCHHHHHHHHHHHHcc----------CCCCHHHHHHHHHHHHHHHHhCCCEEEecC-CCCCCeEEEEeCCCCHHHHHHHH
Confidence 8999999999988643 358899999999999999999999999986 55679999999999999999999
Q ss_pred HhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHH
Q 013652 136 RDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKC 215 (439)
Q Consensus 136 ~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~ 215 (439)
+..|+++.+++|||||||||||++|+||+.+|++||+.+|+++++||||||.+.++..|||++||..+|+..+..+|+.+
T Consensus 71 ~~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~ 150 (321)
T cd07420 71 YKNGLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLL 150 (321)
T ss_pred HHcCCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHH
Confidence 99999877667999999999999999999999999999999999999999999999999999999999987667899999
Q ss_pred hhhhcCCCceeeecCcEEeeccCCCCcccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccC----CCCCCCC
Q 013652 216 LGCFEGLPLASLIGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVL----DPPWNPQ 291 (439)
Q Consensus 216 ~~~f~~LPlaa~i~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~----~~~~~~~ 291 (439)
.++|++||+||+|++++|||||||++. .++++|.++.|+.. .++....
T Consensus 151 ~~~F~~LPlaaii~~~i~cvHGGi~~~----------------------------~~l~~i~~i~r~~~~~~~~~p~~~~ 202 (321)
T cd07420 151 EDVFSWLPLATIIDNKILVVHGGISDS----------------------------TDLDLLDKIDRHKYVSVLRPPLRKG 202 (321)
T ss_pred HHHHHhCCceEEEcCCEEEEeCCCCCc----------------------------cCHHHHHhhhccccccccCCCcccc
Confidence 999999999999999999999999852 36888888887421 1111000
Q ss_pred ----------------CCCCCCCCccccCCCCccCCCCCcCCCCCceeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCC
Q 013652 292 ----------------LSSNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRP 355 (439)
Q Consensus 292 ----------------~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~ 355 (439)
.....++.|+|||||....++..+++||.|+.||++++++||++|++++||||||+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~-------- 274 (321)
T cd07420 203 MEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHEC-------- 274 (321)
T ss_pred ccccccccccccccccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChh--------
Confidence 00113578999999998888777878999999999999999999999999999997
Q ss_pred CCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEEEEEcCCCCCCCcEEEEE
Q 013652 356 DLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFE 417 (439)
Q Consensus 356 ~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~l~i~~~~~~~~~~~~f~ 417 (439)
+++||++.| +|+|+||||||||| +.++|+||+|+|++. .+++|++|+
T Consensus 275 ----v~~G~~~~~---~~~~iTvFSa~nY~------~~~~N~gavl~i~~~--~~~~f~~~~ 321 (321)
T cd07420 275 ----KPEGYEFCH---NNKVITIFSASNYY------EEGSNRGAYIKLGPD--LTPHFVQYQ 321 (321)
T ss_pred ----hhcceEEec---CCeEEEEecCCccC------CCCCccEEEEEECCC--CceeEEEeC
Confidence 689999977 49999999999999 567899999999874 588999885
No 4
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=7.3e-71 Score=550.25 Aligned_cols=311 Identities=37% Similarity=0.648 Sum_probs=280.2
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccC
Q 013652 45 QIPISYPEDGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDV 124 (439)
Q Consensus 45 ~~~~~~p~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDI 124 (439)
.|.+++| +||.++++++++.++.. ..|+.+++.+||++|.++|++||++++++. +...+++|||||
T Consensus 3 ~~~~~~~---~i~~~~~~~~~~~~~~~----------~~l~~~~~~~l~~~~~~il~~ep~l~~i~~-p~~~~~~VvGDI 68 (316)
T cd07417 3 GPRLEDE---KVTLEFVKEMIEWFKDQ----------KKLHKKYAYQILLQVKELLKKLPSLVEITI-PEGEKITVCGDT 68 (316)
T ss_pred CcccCCC---CCCHHHHHHHHHHHHcc----------CCCCHHHHHHHHHHHHHHHHhCCcceeccC-CCCceeEEeecc
Confidence 3668777 79999999999998754 258899999999999999999999999986 555679999999
Q ss_pred CCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHh
Q 013652 125 HGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKY 204 (439)
Q Consensus 125 HG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~ 204 (439)
|||+.+|.++|+..++++.++.|||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..|||..|+..+|
T Consensus 69 HG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~ 148 (316)
T cd07417 69 HGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKY 148 (316)
T ss_pred cCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcc
Confidence 99999999999999998777679999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCCCcccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccC
Q 013652 205 GDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVL 284 (439)
Q Consensus 205 g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~ 284 (439)
+ ..+|+.+.++|++||+++++++++|||||||++. ...++++|.++.|+..
T Consensus 149 ~---~~l~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~--------------------------~~~~l~~i~~i~r~~~ 199 (316)
T cd07417 149 N---EQMFDLFSEVFNWLPLAHLINGKVLVVHGGLFSD--------------------------DGVTLDDIRKIDRFRQ 199 (316)
T ss_pred c---HHHHHHHHHHHHhchHhheeCCeEEEEccccccC--------------------------CCccHHHhhcccCCCC
Confidence 6 4799999999999999999999999999999642 2368999999998743
Q ss_pred CCCCCCCCCCCCCCCccccCCCCccCCCCCcCCCCCceeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCc
Q 013652 285 DPPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGY 364 (439)
Q Consensus 285 ~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy 364 (439)
. +.+.+++|+|||||....++.++ +||.|+.||++++++||++|++++||||||+ +++||
T Consensus 200 ~-------~~~~~~~dllWsDP~~~~~~~~s-~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~ 259 (316)
T cd07417 200 P-------PDSGLMCELLWSDPQPQPGRSPS-KRGVGCQFGPDVTKRFLEENNLEYIIRSHEV------------KDEGY 259 (316)
T ss_pred C-------CccccceeeeecCCCCCCCCCcc-CCCCceEeCHHHHHHHHHHcCCcEEEECCcc------------cceeE
Confidence 2 23447899999999988888765 7999999999999999999999999999997 68999
Q ss_pred eeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEEEEEcCCCCCCCcEEEEEecCCCCCCcccc
Q 013652 365 TIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVRCLL 429 (439)
Q Consensus 365 ~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~l~i~~~~~~~~~~~~f~~~~~~~~~~p~~ 429 (439)
++.| +|+|+||||||||| +.++|+||+|.|++.+ .+++|++|+++ +||.+.||+
T Consensus 260 ~~~~---~~~~~TvfSa~~Y~------~~~~N~ga~~~i~~~~-~~~~~~~~~~~-~~~~~~~~~ 313 (316)
T cd07417 260 EVEH---DGKCITVFSAPNYC------DQMGNKGAFIRITGSD-LKPKFTQFEAV-PHPNVKPMA 313 (316)
T ss_pred EEec---CCeEEEEeCCcccc------CCCCcceEEEEEeCCC-ceeeeEeccCC-CCCCCCccC
Confidence 9977 59999999999999 5789999999998743 48899999998 999999994
No 5
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-70 Score=501.26 Aligned_cols=281 Identities=34% Similarity=0.550 Sum_probs=257.6
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChH
Q 013652 82 SVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL 161 (439)
Q Consensus 82 ~~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~ 161 (439)
+.+|++++..||+.++++|..|.|++.++. |++|+|||||||+||+++|+..|-.+..+ |||+|||||||.+|+
T Consensus 17 kyLpE~elk~LCe~v~d~L~eEsNvqPV~t-----PVTvCGDIHGQFyDL~eLFrtgG~vP~tn-YiFmGDfVDRGyySL 90 (306)
T KOG0373|consen 17 KYLPENELKRLCEMVKDILMEESNVQPVST-----PVTVCGDIHGQFYDLLELFRTGGQVPDTN-YIFMGDFVDRGYYSL 90 (306)
T ss_pred CCCCHHHHHHHHHHHHHHHhhhcCccccCC-----CeeEeeccchhHHHHHHHHHhcCCCCCcc-eEEeccccccccccH
Confidence 689999999999999999999999999988 99999999999999999999999777665 999999999999999
Q ss_pred HHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCCC
Q 013652 162 ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFR 241 (439)
Q Consensus 162 evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~ 241 (439)
|++.+|+.||.+||.+|.+||||||++.+++.|||++||..|||.. +.|+.+.++|+.|+++|+|+++++|||||+||
T Consensus 91 EtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGna--n~wkycckVFD~LtlaAiID~~vLCVHGGLSP 168 (306)
T KOG0373|consen 91 ETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNA--NVWKYCCKVFDFLTLAAIIDEKVLCVHGGLSP 168 (306)
T ss_pred HHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCc--hHHHHHHHHHhhhhHHHHhcCcEEEEcCCCCc
Confidence 9999999999999999999999999999999999999999999975 89999999999999999999999999999998
Q ss_pred cccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCccCCCCCcCCCCCc
Q 013652 242 SVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGIG 321 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g 321 (439)
. +.++|+|+-+.|... .|.+ | -++|++||||.+-..|.-+ +||+|
T Consensus 169 d---------------------------irtlDqir~i~R~qE-iPh~---G---~fcDlmWSDPedve~W~vS-pRGAG 213 (306)
T KOG0373|consen 169 D---------------------------IRTLDQIRLIERNQE-IPHE---G---PFCDLMWSDPEDVETWAVS-PRGAG 213 (306)
T ss_pred c---------------------------ceeHHHHHhHHhhcc-CCCC---C---CccceeccChhhhhhheeC-CCCcc
Confidence 4 478999999999864 4444 4 4899999999998888876 89999
Q ss_pred eeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEEE
Q 013652 322 LLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYI 401 (439)
Q Consensus 322 ~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~l 401 (439)
++||.+++.+|+..|+|++|.|+||- +++||++.++ +..|+||||||||| ++.+|.||+|
T Consensus 214 wlFGskVt~eF~~iN~L~LicRaHQL------------V~EG~KymF~--eK~lvTVWSAPNYC------YRCGNvAsi~ 273 (306)
T KOG0373|consen 214 WLFGSKVTTEFNHINNLNLICRAHQL------------VQEGFKYMFD--EKGLVTVWSAPNYC------YRCGNVASIM 273 (306)
T ss_pred eeechhhhHHHHhccchHHHHhHHHH------------HHhhHHhccC--CCCEEEEecCCchh------hhccCeeeEE
Confidence 99999999999999999999999994 7899999754 44499999999999 7999999999
Q ss_pred EEcCCCCCCCcEEEEEecCCCCCCcc
Q 013652 402 VLKPPKFDIPDFNVFEAVTPRPDVRC 427 (439)
Q Consensus 402 ~i~~~~~~~~~~~~f~~~~~~~~~~p 427 (439)
.+++. .++++.-|.|++....+.|
T Consensus 274 ~~d~~--~~r~~k~F~avpd~~~~~p 297 (306)
T KOG0373|consen 274 SFDDN--LERETKIFSAVPDNSRVIP 297 (306)
T ss_pred Eeccc--CCccceeeeecCCccccCC
Confidence 99875 6899999999854444443
No 6
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.2e-67 Score=522.64 Aligned_cols=292 Identities=34% Similarity=0.566 Sum_probs=257.1
Q ss_pred HHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCC
Q 013652 61 IQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGF 140 (439)
Q Consensus 61 i~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~ 140 (439)
++-|++.|... ..++++++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..+.
T Consensus 3 ~~~~~~~~~~~----------~~l~~~~i~~l~~~~~~il~~e~~l~~i~~-----~i~ViGDIHG~~~dL~~l~~~~g~ 67 (305)
T cd07416 3 IDVLKAHFMRE----------GRLSEEDALRIITEGAEILRQEPNLLRIEA-----PVTVCGDIHGQFYDLLKLFEVGGS 67 (305)
T ss_pred HHHHHHHHHcC----------CCCCHHHHHHHHHHHHHHHHhCCCeEccCC-----CEEEEEeCCCCHHHHHHHHHhcCC
Confidence 34556666533 358899999999999999999999999987 999999999999999999999998
Q ss_pred CCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhc
Q 013652 141 PSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFE 220 (439)
Q Consensus 141 ~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~ 220 (439)
++.+. |||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+ ..+|..+.++|+
T Consensus 68 ~~~~~-ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~---~~l~~~~~~~f~ 143 (305)
T cd07416 68 PANTR-YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS---ERVYDACMEAFD 143 (305)
T ss_pred CCCce-EEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhcc---HHHHHHHHHHHh
Confidence 87655 99999999999999999999999999999999999999999999999999999999985 589999999999
Q ss_pred CCCceeeecCcEEeeccCCCCcccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCc
Q 013652 221 GLPLASLIGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGD 300 (439)
Q Consensus 221 ~LPlaa~i~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~d 300 (439)
+||+++++++++|||||||++. +.++++|.++.|+... +.+.+++|
T Consensus 144 ~LPlaaii~~~i~~vHGGi~p~---------------------------~~~l~~i~~i~r~~~~-------~~~~~~~d 189 (305)
T cd07416 144 CLPLAALMNQQFLCVHGGLSPE---------------------------LKTLDDIRKLDRFREP-------PAFGPMCD 189 (305)
T ss_pred hccceeEEcCCEEEEcCCCCcc---------------------------cccHHHhcccCCCCCC-------CCCCccee
Confidence 9999999999999999999874 3689999999997533 22346899
Q ss_pred cccCCCCccC-------CCCCcCCCCCceeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccC-C-
Q 013652 301 LLWSDPSMKL-------GLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDV-E- 371 (439)
Q Consensus 301 lLWsDP~~~~-------g~~~n~~Rg~g~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~-~- 371 (439)
+|||||.... +|.+|+.||.|+.||++++++||++|++++||||||+ +++||++.|+. .
T Consensus 190 llWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~~~~~ 257 (305)
T cd07416 190 LLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEA------------QDAGYRMYRKSQTT 257 (305)
T ss_pred eeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEeccc------------cccceEEecCCCcC
Confidence 9999998643 4777889999999999999999999999999999997 67999987641 0
Q ss_pred -CCeEEEEEcCCCCCCcccccccCCCcEEEEEEcCCCCCCCcEEEEEecCCCCCCcc
Q 013652 372 -SGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVRC 427 (439)
Q Consensus 372 -~g~liTvFSa~nY~~~~~~~~~~~N~gA~l~i~~~~~~~~~~~~f~~~~~~~~~~p 427 (439)
.++|+||||||||| +.++|+||+|.|+++ ...|++|+++ |||-+-|
T Consensus 258 ~~~~~iTvFSa~~Y~------~~~~N~~a~l~i~~~---~~~~~~~~~~-~~~~~~~ 304 (305)
T cd07416 258 GFPSLITIFSAPNYL------DVYNNKAAVLKYENN---VMNIRQFNCS-PHPYWLP 304 (305)
T ss_pred CCCcEEEEeCCcccc------CCCCceEEEEEEcCC---cceEEEecCC-CCCCCCC
Confidence 13999999999999 578999999999875 4589999998 9997644
No 7
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=1e-66 Score=517.30 Aligned_cols=273 Identities=34% Similarity=0.560 Sum_probs=248.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHH
Q 013652 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE 162 (439)
Q Consensus 83 ~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~e 162 (439)
.++++++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..+.++.+. |||||||||||++|+|
T Consensus 15 ~l~~~~i~~l~~~~~~il~~e~~~~~i~~-----~i~vvGDIHG~~~~L~~l~~~~~~~~~~~-~lfLGDyVDRG~~s~e 88 (303)
T PTZ00239 15 CLPERDLKLICERAKEIFLEESNVQPVRA-----PVNVCGDIHGQFYDLQALFKEGGDIPNAN-YIFIGDFVDRGYNSVE 88 (303)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCeEecCC-----CEEEEEeCCCCHHHHHHHHHhcCCCCCce-EEEeeeEcCCCCCHHH
Confidence 58899999999999999999999999987 89999999999999999999999876655 9999999999999999
Q ss_pred HHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCCCc
Q 013652 163 TFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRS 242 (439)
Q Consensus 163 vl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~~ 242 (439)
++.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+.. .+|+.+.++|++||++|++++++|||||||++.
T Consensus 89 vl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~--~~~~~~~~~f~~LPlaaii~~~i~cvHgGi~p~ 166 (303)
T PTZ00239 89 TMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNS--NPWRLFMDVFDCLPLAALIEGQILCVHGGLSPD 166 (303)
T ss_pred HHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcCh--hHHHHHHHHHHhCchheEEcCeEEEEcCccCcc
Confidence 999999999999999999999999999999999999999999853 789999999999999999999999999999974
Q ss_pred ccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCccCCCCCcCCCCCce
Q 013652 243 VSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGIGL 322 (439)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~ 322 (439)
+.++++|.++.|+...+ .+.+++|+|||||....+|.++ .||.|+
T Consensus 167 ---------------------------~~~l~~i~~i~r~~~~~-------~~~~~~dllWsDP~~~~~~~~~-~Rg~g~ 211 (303)
T PTZ00239 167 ---------------------------MRTIDQIRTIDRKIEIP-------HEGPFCDLMWSDPEEVEYWAVN-SRGAGY 211 (303)
T ss_pred ---------------------------cccHhhhccccCCCCCC-------CCCCceeeEecCccccCCCccC-CCCCcc
Confidence 36899999999986432 2336899999999987888876 699999
Q ss_pred eeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEEEE
Q 013652 323 LWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIV 402 (439)
Q Consensus 323 ~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~l~ 402 (439)
+||++++++||++|++++||||||+ +++||++.+. +++|+||||||||| +.++|+||+|.
T Consensus 212 ~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~~--~~~~iTvfSa~~Y~------~~~~N~~ail~ 271 (303)
T PTZ00239 212 LFGAKVTKEFCRLNDLTLICRAHQL------------VMEGYKYWFP--DQNLVTVWSAPNYC------YRCGNIASILC 271 (303)
T ss_pred ccCHHHHHHHHHHCCCcEEEEcChh------------hccceEEEeC--CCeEEEEECCCccc------CCCCceEEEEE
Confidence 9999999999999999999999997 6899998653 56799999999999 67899999999
Q ss_pred EcCCCCCCCcEEEEEecC
Q 013652 403 LKPPKFDIPDFNVFEAVT 420 (439)
Q Consensus 403 i~~~~~~~~~~~~f~~~~ 420 (439)
++++ .+.+|++|++++
T Consensus 272 i~~~--~~~~~~~~~~~~ 287 (303)
T PTZ00239 272 LDEN--LQQTWKTFKEVP 287 (303)
T ss_pred ECCC--CcEeeEEeeCCC
Confidence 9875 578899999873
No 8
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=8.2e-67 Score=514.91 Aligned_cols=271 Identities=41% Similarity=0.637 Sum_probs=248.5
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHH
Q 013652 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE 162 (439)
Q Consensus 83 ~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~e 162 (439)
.++.+++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..++++.+. |||||||||||++|+|
T Consensus 14 ~l~~~~~~~l~~~~~~il~~e~~~~~i~~-----~i~vvGDIHG~~~dL~~ll~~~~~~~~~~-~lfLGDyVDRG~~s~e 87 (285)
T cd07415 14 LLPESEVKSLCEKAKEILVKESNVQRVRS-----PVTVCGDIHGQFYDLLELFRVGGDPPDTN-YLFLGDYVDRGYYSVE 87 (285)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEecCC-----CEEEEEeCCCCHHHHHHHHHHcCCCCCCe-EEEEeEECCCCcCHHH
Confidence 58899999999999999999999999987 99999999999999999999999877655 9999999999999999
Q ss_pred HHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCCCc
Q 013652 163 TFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRS 242 (439)
Q Consensus 163 vl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~~ 242 (439)
|+.+|++||+.+|.++++||||||.+.++..|||..|+..+|+. ..+|+.+.++|++||++|++++++|||||||++.
T Consensus 88 vl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~--~~l~~~~~~~f~~lPlaaii~~~i~cvHgGi~p~ 165 (285)
T cd07415 88 TFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGN--ANVWKYCTDLFDYLPLAALIDNQIFCVHGGLSPS 165 (285)
T ss_pred HHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCc--hHHHHHHHHHHHHhHHHhEeCCeEEEEcCCCCCC
Confidence 99999999999999999999999999999999999999999975 4799999999999999999999999999999974
Q ss_pred ccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCccCCCCCcCCCCCce
Q 013652 243 VSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGIGL 322 (439)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~ 322 (439)
. .++++|.++.|+... +.+.++.|+|||||....+|.++ .||.|+
T Consensus 166 ~---------------------------~~~~~i~~i~r~~~~-------~~~~~~~dllWsDP~~~~~~~~~-~Rg~g~ 210 (285)
T cd07415 166 I---------------------------DTLDQIRAIDRFQEV-------PHEGPMCDLLWSDPDDIEGWGIS-PRGAGY 210 (285)
T ss_pred c---------------------------ccHHHhhcccCCCCC-------CCCCCccceEecCCCccCCCCcC-CCCCcc
Confidence 3 688999999987533 22346899999999988888876 799999
Q ss_pred eeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEEEE
Q 013652 323 LWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIV 402 (439)
Q Consensus 323 ~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~l~ 402 (439)
.||++++++||++|++++||||||+ +++||++.| +|+|+||||||||| +.++|+||+|.
T Consensus 211 ~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~---~~~~~TvfSa~~y~------~~~~n~~a~l~ 269 (285)
T cd07415 211 LFGQDVVEEFNHNNGLTLICRAHQL------------VMEGYQWMF---DDKLVTVWSAPNYC------YRCGNVASIME 269 (285)
T ss_pred ccCHHHHHHHHHHCCCeEEEEcCcc------------ccceEEEec---CCcEEEEecCCccc------CCCCceEEEEE
Confidence 9999999999999999999999997 689999977 49999999999999 57899999999
Q ss_pred EcCCCCCCCcEEEEEec
Q 013652 403 LKPPKFDIPDFNVFEAV 419 (439)
Q Consensus 403 i~~~~~~~~~~~~f~~~ 419 (439)
|++. .+.+|++|++.
T Consensus 270 i~~~--~~~~~~~~~~~ 284 (285)
T cd07415 270 LDEH--LKRSFKVFEAA 284 (285)
T ss_pred ECCC--CcEeEEEeccC
Confidence 9875 57889999854
No 9
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=4.2e-66 Score=514.82 Aligned_cols=271 Identities=34% Similarity=0.627 Sum_probs=247.3
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChH
Q 013652 82 SVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL 161 (439)
Q Consensus 82 ~~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~ 161 (439)
..++++++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..++++.+. |||||||||||++|+
T Consensus 30 ~~l~~~~i~~l~~~~~~il~~ep~ll~i~~-----~i~vvGDIHG~~~dL~~l~~~~g~~~~~~-ylfLGDyVDRG~~s~ 103 (320)
T PTZ00480 30 VNLTEAEVRGLCIKARDIFISQPILLELEA-----PLKICGDVHGQYFDLLRLFEYGGYPPESN-YLFLGDYVDRGKQSL 103 (320)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCceEecCC-----CeEEEeecccCHHHHHHHHHhcCCCCcce-EEEeceecCCCCCcH
Confidence 368899999999999999999999999987 99999999999999999999999988766 999999999999999
Q ss_pred HHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCCC
Q 013652 162 ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFR 241 (439)
Q Consensus 162 evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~ 241 (439)
||+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+ ..+|..++++|.+||+||+|++++|||||||++
T Consensus 104 evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~---~~l~~~~~~~F~~LPlaAiI~~~i~cvHGGI~p 180 (320)
T PTZ00480 104 ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT---IKLWKTFTDCFNCLPVAALIDEKILCMHGGLSP 180 (320)
T ss_pred HHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC---HHHHHHHHHHHHhccHhheecCcEEEEcCCcCc
Confidence 99999999999999999999999999999999999999999995 479999999999999999999999999999997
Q ss_pred cccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCcc-CCCCCcCCCCC
Q 013652 242 SVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMK-LGLSENTERGI 320 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~-~g~~~n~~Rg~ 320 (439)
. +.++++|+++.|+... +++.++.|+|||||... .+|.++ +||.
T Consensus 181 ~---------------------------~~~l~~i~~i~rp~~~-------~~~~~~~dllWSDP~~~~~~~~~s-~RG~ 225 (320)
T PTZ00480 181 E---------------------------LSNLEQIRRIMRPTDV-------PDTGLLCDLLWSDPDKDVQGWADN-ERGV 225 (320)
T ss_pred c---------------------------cCCHHHHhcccCCCCC-------CccchhhheeecCcccccCCCccC-CCCC
Confidence 4 3689999999988633 33457899999999875 577776 7999
Q ss_pred ceeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEE
Q 013652 321 GLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAY 400 (439)
Q Consensus 321 g~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~ 400 (439)
|++||++++++||++|++++||||||+ +++||++.| +++|+||||||||| +.++|+||+
T Consensus 226 g~~FG~~~~~~Fl~~n~l~~IiR~Hq~------------v~~G~~~~~---~~~~iTvFSa~~Y~------~~~~N~ga~ 284 (320)
T PTZ00480 226 SYVFSQEIVQVFLKKHELDLICRAHQV------------VEDGYEFFS---KRQLVTLFSAPNYC------GEFDNAGSM 284 (320)
T ss_pred ccccCHHHHHHHHHhCCCcEEEEcCcc------------ccCceEEeC---CCcEEEEeCCcccC------CCCCccEEE
Confidence 999999999999999999999999997 689999976 59999999999999 578999999
Q ss_pred EEEcCCCCCCCcEEEEEec
Q 013652 401 IVLKPPKFDIPDFNVFEAV 419 (439)
Q Consensus 401 l~i~~~~~~~~~~~~f~~~ 419 (439)
+.|+++ ...+|++|++.
T Consensus 285 l~i~~~--~~~~~~~~~p~ 301 (320)
T PTZ00480 285 MTIDES--LMCSFQILKPA 301 (320)
T ss_pred EEECCC--CcEeEEEecCC
Confidence 999875 46678888754
No 10
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.4e-66 Score=519.95 Aligned_cols=270 Identities=37% Similarity=0.642 Sum_probs=247.2
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcC-CCCCCCceeeeccccCCCCChH
Q 013652 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAG-FPSKNCFFVFNGDYVDRGAWGL 161 (439)
Q Consensus 83 ~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g-~~~~~~~~vfLGDyVDRG~~s~ 161 (439)
.++++++.+||..+.++|..+|+++++++ ||.|||||||||.||+++|...| +|+..+ |||||||||||++|+
T Consensus 31 ~l~~~ei~~l~~~~~~if~~~~~l~e~~a-----PV~i~GDiHGq~~DLlrlf~~~g~~pp~~~-ylFLGDYVDRG~~sl 104 (331)
T KOG0374|consen 31 PLSKSEIIKLCDKAREIFLSQPTLLELSA-----PVKIVGDIHGQFGDLLRLFDLLGSFPPDQN-YVFLGDYVDRGKQSL 104 (331)
T ss_pred eccHHHHHHHHHHHHHHhcCCCceeecCC-----CEEEEccCcCCHHHHHHHHHhcCCCCCccc-EEEecccccCCccce
Confidence 48899999999999999999999999998 99999999999999999999999 886665 999999999999999
Q ss_pred HHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCCC
Q 013652 162 ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFR 241 (439)
Q Consensus 162 evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~ 241 (439)
|++.+|+++|++||++|++||||||.+.+|..|||++||.++|+. ..+|..|++.|++||++|+|+++|+|+||||+|
T Consensus 105 E~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~--~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp 182 (331)
T KOG0374|consen 105 ETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGE--IKLWKAFNDAFNCLPLAALIDGKILCMHGGLSP 182 (331)
T ss_pred EEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcch--HHHHHHHHHHHhhCchhheecceEEEecCCCCh
Confidence 999999999999999999999999999999999999999999974 489999999999999999999999999999998
Q ss_pred cccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCcc-CCCCCcCCCCC
Q 013652 242 SVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMK-LGLSENTERGI 320 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~-~g~~~n~~Rg~ 320 (439)
. +.++++|+.+.|+. +. ++..+++|+|||||... .||.+|. ||.
T Consensus 183 ~---------------------------l~~~~~i~~i~rp~-~~------~~~gll~DLlWsdp~~~~~g~~~n~-Rg~ 227 (331)
T KOG0374|consen 183 H---------------------------LKSLDQIRAIPRPT-DS------PDKGLLCDLLWSDPDDDVPGWEEND-RGV 227 (331)
T ss_pred h---------------------------hcChHHHhhccCCc-CC------CccceeeeeeecCCCCCCCCcccCC-Cce
Confidence 4 47899999999993 43 33448999999999986 7999985 999
Q ss_pred ceeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEE
Q 013652 321 GLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAY 400 (439)
Q Consensus 321 g~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~ 400 (439)
++.||++++++||+++++++||||||+ +.+||++ |++++|+||||||+|| +.++|.||+
T Consensus 228 s~~fg~~~v~~f~~~~~ldlivRaHqv------------v~dGyef---fa~r~lvTIFSAP~Yc------g~~~n~gav 286 (331)
T KOG0374|consen 228 SFTFGPAVVEDFCKKLDLDLIVRAHQV------------VEDGYEF---FAGRKLVTIFSAPNYC------GEFDNAGAV 286 (331)
T ss_pred eeEecHHHHHHHHHHhCcceEEEcCcc------------ccccceE---ecCceEEEEecCchhc------cccCCceEE
Confidence 999999999999999999999999997 7899998 4579999999999999 689999999
Q ss_pred EEEcCCCCCCCcEEEEEecCC
Q 013652 401 IVLKPPKFDIPDFNVFEAVTP 421 (439)
Q Consensus 401 l~i~~~~~~~~~~~~f~~~~~ 421 (439)
|.++.. .. .+|+..+|
T Consensus 287 m~Vd~~--l~---~sf~~l~p 302 (331)
T KOG0374|consen 287 MRVDKN--LK---CSFVILRP 302 (331)
T ss_pred EEECCC--Ce---EEEEEecc
Confidence 999976 34 45555434
No 11
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=2.5e-65 Score=505.83 Aligned_cols=270 Identities=31% Similarity=0.575 Sum_probs=245.3
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChH
Q 013652 82 SVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL 161 (439)
Q Consensus 82 ~~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~ 161 (439)
..++.+++.+||++|+++|++||+++++++ +++||||||||+.+|.++|+..++++.+. |||||||||||++|+
T Consensus 23 ~~i~~~~i~~l~~~~~~il~~e~~ll~i~~-----p~~ViGDIHG~~~~L~~l~~~~~~~~~~~-~lfLGDyVDRG~~s~ 96 (294)
T PTZ00244 23 ILIREEDIRAVLTEVREIFMSQPMLLEIRP-----PVRVCGDTHGQYYDLLRIFEKCGFPPYSN-YLFLGDYVDRGKHSV 96 (294)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEeccC-----CceeeccCCCCHHHHHHHHHHcCCCCccc-EEEeeeEecCCCCHH
Confidence 468899999999999999999999999987 89999999999999999999999987766 999999999999999
Q ss_pred HHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCCC
Q 013652 162 ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFR 241 (439)
Q Consensus 162 evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~ 241 (439)
||+.+|+++|+.+|.++++||||||.+.++..|||.+|+..+|+ ..+|+.+.++|++||++|++++++||||||++|
T Consensus 97 evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~---~~l~~~~~~~f~~lPlaaii~~~il~vHgGi~p 173 (294)
T PTZ00244 97 ETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN---IKLFKAFTDVFNTMPVCCVISEKIICMHGGLSP 173 (294)
T ss_pred HHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh---HHHHHHHHHHHHhCchheEecCeeEEEcCCCCc
Confidence 99999999999999999999999999999999999999999996 479999999999999999999999999999998
Q ss_pred cccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCcc-CCCCCcCCCCC
Q 013652 242 SVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMK-LGLSENTERGI 320 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~-~g~~~n~~Rg~ 320 (439)
.. .++++|..+.|+... +++.++.|+|||||... .+|.++ .||.
T Consensus 174 ~~---------------------------~~l~~i~~i~rp~~~-------~~~~~~~dllWsDP~~~~~~~~~~-~Rg~ 218 (294)
T PTZ00244 174 DL---------------------------TSLASVNEIERPCDV-------PDRGILCDLLWADPEDEVRGFLES-DRGV 218 (294)
T ss_pred hh---------------------------hHHHHhhhhccccCC-------CccchhheeeecCcccccCCCCcC-CCCC
Confidence 43 578999999998633 23447899999999875 577765 7999
Q ss_pred ceeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEE
Q 013652 321 GLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAY 400 (439)
Q Consensus 321 g~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~ 400 (439)
|++||++++++||++|++++||||||+ +++||++.| +|+|+||||||||| +.++|+||+
T Consensus 219 g~~fg~~~~~~Fl~~n~l~~iiR~Hq~------------~~~G~~~~~---~~~~iTvfSa~~Y~------~~~~N~~a~ 277 (294)
T PTZ00244 219 SYLFGEDIVNDFLDMVDMDLIVRAHQV------------MERGYGFFA---SRQLVTVFSAPNYC------GEFDNDAAV 277 (294)
T ss_pred ccccCHHHHHHHHHHcCCcEEEEcCcc------------ccCceEEcC---CCeEEEEeCCcccc------CCCCceEEE
Confidence 999999999999999999999999997 689999866 59999999999999 568999999
Q ss_pred EEEcCCCCCCCcEEEEEe
Q 013652 401 IVLKPPKFDIPDFNVFEA 418 (439)
Q Consensus 401 l~i~~~~~~~~~~~~f~~ 418 (439)
|.|+++ .+.+|+.|.|
T Consensus 278 l~i~~~--~~~~f~~~~~ 293 (294)
T PTZ00244 278 MNIDDK--LQCSFLIIPA 293 (294)
T ss_pred EEECCC--CcEeEEEeec
Confidence 999875 4667777764
No 12
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=8.1e-65 Score=502.55 Aligned_cols=269 Identities=35% Similarity=0.646 Sum_probs=244.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChH
Q 013652 82 SVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL 161 (439)
Q Consensus 82 ~~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~ 161 (439)
..++++++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..++++.+. |||||||||||++|+
T Consensus 21 ~~~~~~~i~~l~~~~~~il~~ep~~l~i~~-----~i~viGDIHG~~~~L~~l~~~~~~~~~~~-~lfLGDyVDRG~~s~ 94 (293)
T cd07414 21 VQLTEAEIRGLCLKSREIFLSQPILLELEA-----PLKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQSL 94 (293)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCeEecCC-----ceEEEEecCCCHHHHHHHHHhcCCCCcce-EEEEeeEecCCCCcH
Confidence 468899999999999999999999999987 99999999999999999999999987665 999999999999999
Q ss_pred HHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCCC
Q 013652 162 ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFR 241 (439)
Q Consensus 162 evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~ 241 (439)
|++.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+ ..+|..+.++|++||++|++++++||||||+++
T Consensus 95 e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~---~~l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~p 171 (293)
T cd07414 95 ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN---IKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSP 171 (293)
T ss_pred HHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh---HHHHHHHHHHHHHhHHHHhhCCcEEEEccCCCc
Confidence 99999999999999999999999999999999999999999996 479999999999999999999999999999997
Q ss_pred cccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCcc-CCCCCcCCCCC
Q 013652 242 SVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMK-LGLSENTERGI 320 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~-~g~~~n~~Rg~ 320 (439)
. +.++++|+++.|+... +.+.++.|+|||||... .+|.+| .||.
T Consensus 172 ~---------------------------~~~l~~i~~i~r~~~~-------~~~~~~~dllWsDP~~~~~~~~~~-~Rg~ 216 (293)
T cd07414 172 D---------------------------LQSMEQIRRIMRPTDV-------PDQGLLCDLLWSDPDKDVQGWGEN-DRGV 216 (293)
T ss_pred c---------------------------cCcHHHHhcccCCCCC-------CchhhHhhhhccCcccccCCCccC-CCCc
Confidence 4 3689999999997533 23347899999999865 566665 7999
Q ss_pred ceeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEE
Q 013652 321 GLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAY 400 (439)
Q Consensus 321 g~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~ 400 (439)
|+.||++++++||++||+++||||||+ +++||++.+ +++|+||||||||| +.++|+||+
T Consensus 217 g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~---~~~~iTvfSa~~Y~------~~~~N~~a~ 275 (293)
T cd07414 217 SFTFGKDVVAKFLNKHDLDLICRAHQV------------VEDGYEFFA---KRQLVTLFSAPNYC------GEFDNAGAM 275 (293)
T ss_pred ceecCHHHHHHHHHHcCCeEEEECCcc------------ccCeEEEeC---CCcEEEEecCCccc------CCCCceEEE
Confidence 999999999999999999999999997 689999866 59999999999999 568999999
Q ss_pred EEEcCCCCCCCcEEEEE
Q 013652 401 IVLKPPKFDIPDFNVFE 417 (439)
Q Consensus 401 l~i~~~~~~~~~~~~f~ 417 (439)
|.|+++ ...+|+.|+
T Consensus 276 l~i~~~--~~~~~~~~~ 290 (293)
T cd07414 276 MSVDET--LMCSFQILK 290 (293)
T ss_pred EEECCC--CcEEEEEec
Confidence 999875 356677775
No 13
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=2e-64 Score=495.54 Aligned_cols=268 Identities=41% Similarity=0.685 Sum_probs=244.0
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHH
Q 013652 84 FPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLET 163 (439)
Q Consensus 84 l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~ev 163 (439)
++++++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..+.++.+. |||||||||||++|+||
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~-----~i~vvGDiHG~~~~l~~ll~~~~~~~~~~-~vfLGD~VDrG~~s~e~ 74 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSA-----PVTVCGDIHGQFDDLLRLFDLNGPPPDTN-YVFLGDYVDRGPFSIEV 74 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCC-----CEEEEEeCcCCHHHHHHHHHHcCCCCCce-EEEeCCccCCCCChHHH
Confidence 3578999999999999999999999987 99999999999999999999999876655 99999999999999999
Q ss_pred HHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCCCcc
Q 013652 164 FLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRSV 243 (439)
Q Consensus 164 l~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~~~ 243 (439)
+.+|+++|+.+|.++++||||||.+.++..|||.+|+..+|+ ..+|+.+.++|++||+++++++++||||||+++.
T Consensus 75 l~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~---~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~- 150 (271)
T smart00156 75 ILLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG---EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPD- 150 (271)
T ss_pred HHHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC---HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCc-
Confidence 999999999999999999999999999999999999999996 4899999999999999999999999999999874
Q ss_pred cCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCc-cCCCCCcCCCCCce
Q 013652 244 SHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSM-KLGLSENTERGIGL 322 (439)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~-~~g~~~n~~Rg~g~ 322 (439)
+.++++|.++.|+... ..+.++.|+|||||.. ..+|.+| .||.|+
T Consensus 151 --------------------------~~~l~~i~~i~r~~~~-------~~~~~~~dllWsDP~~~~~~~~~~-~Rg~g~ 196 (271)
T smart00156 151 --------------------------LTTLDDIRKLKRPQEP-------PDEGLLIDLLWSDPDQPVDGFQPS-IRGASY 196 (271)
T ss_pred --------------------------cCCHHHHhcccCCCCC-------CchhhhhheeecCCCcccCCCccC-CCCCcc
Confidence 3689999999998533 2344789999999964 5688877 599999
Q ss_pred eeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEEEE
Q 013652 323 LWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIV 402 (439)
Q Consensus 323 ~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~l~ 402 (439)
.||++++++||++|++++||||||+ +++||++.| +|+|+||||||||| +.++|+||++.
T Consensus 197 ~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~---~~~~~TvfSa~~y~------~~~~n~~a~~~ 255 (271)
T smart00156 197 YFGPDAVDEFLKKNNLKLIIRAHQV------------VDDGYEFFH---DRKLVTIFSAPNYC------GRFGNKAAVLK 255 (271)
T ss_pred ccCHHHHHHHHHHCCCeEEEecCcc------------cCCcEEEec---CCcEEEEECCcccc------cCCCceEEEEE
Confidence 9999999999999999999999997 679999977 59999999999999 56899999999
Q ss_pred EcCCCCCCCcEEEEEe
Q 013652 403 LKPPKFDIPDFNVFEA 418 (439)
Q Consensus 403 i~~~~~~~~~~~~f~~ 418 (439)
|+++ .+.+|++|++
T Consensus 256 i~~~--~~~~~~~~~~ 269 (271)
T smart00156 256 VDKD--LKLSFEQFKP 269 (271)
T ss_pred ECCC--CcEEEEEecC
Confidence 9875 5778888874
No 14
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-65 Score=509.43 Aligned_cols=313 Identities=35% Similarity=0.550 Sum_probs=276.4
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEcc
Q 013652 44 VQIPISYPEDGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGD 123 (439)
Q Consensus 44 ~~~~~~~p~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGD 123 (439)
..|.+++| |+...|..|+++|+.+ ++|+..+|..++.+|+++|++.||+-+|+. .....++||||
T Consensus 108 ~Gp~ls~P----l~~~~i~~lieaFk~k----------q~LH~kYVl~iL~EakK~lkqmPnis~isT-s~S~qVTiCGD 172 (631)
T KOG0377|consen 108 NGPKLSLP----LRKNHIDLLIEAFKKK----------QRLHPKYVLLILREAKKSLKQMPNISRIST-SVSQQVTICGD 172 (631)
T ss_pred CCcccccC----cCchHHHHHHHHHHHh----------hhccHHHHHHHHHHHHHHHHhCCCCCcccc-ccccceEEecc
Confidence 56789999 9999999999999876 479999999999999999999999999987 56678999999
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHH
Q 013652 124 VHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAK 203 (439)
Q Consensus 124 IHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~ 203 (439)
+||.++||.-+|.+.|+|+.++.|||+||+||||.+|+|||..|+++-+.||..+|+.|||||..+||..|||.+|+..|
T Consensus 173 LHGklDDL~~I~yKNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~K 252 (631)
T KOG0377|consen 173 LHGKLDDLLVILYKNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESK 252 (631)
T ss_pred ccccccceEEEEecCCCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCCCcccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhcc
Q 013652 204 YGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSV 283 (439)
Q Consensus 204 ~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~ 283 (439)
|...+..+.+-+.++|+|||++.+|+.+||+||||+|...+++.. .++.|..
T Consensus 253 Yk~~~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd~Tdl~ll----------------------------~kIeR~k 304 (631)
T KOG0377|consen 253 YKRHGKRILRFLEEVYRWLPIGTIIDSRILVVHGGISDSTDLDLL----------------------------DKIERGK 304 (631)
T ss_pred hhhcccHHHHHHHHHHHhcchhhhcccceEEEecCcccchhHHHH----------------------------hhhhccc
Confidence 999999999999999999999999999999999999987644332 2222211
Q ss_pred ----CCCCCCCC---------CC--CCCCCCccccCCCCccCCCCCcCCCCCceeeChhhHHHHHHHcCCeEEEEeccCC
Q 013652 284 ----LDPPWNPQ---------LS--SNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGP 348 (439)
Q Consensus 284 ----~~~~~~~~---------~~--~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~~fG~~~~~~FL~~~~l~~IIRgHe~~ 348 (439)
+.||.+.. ++ +=..+.|++||||....|+.+|.-||.|++||||++..||++++++++||+|||+
T Consensus 305 ~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECK 384 (631)
T KOG0377|consen 305 YVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECK 384 (631)
T ss_pred eeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeecccC
Confidence 11111000 00 0013679999999999999999999999999999999999999999999999985
Q ss_pred CCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEEEEEcCCCCCCCcEEEEEecCCC
Q 013652 349 DARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPR 422 (439)
Q Consensus 349 ~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~l~i~~~~~~~~~~~~f~~~~~~ 422 (439)
.+||+|+|+ ++|+|||||+||++ ...|+|||+.+.+. .+|+|+||+|.+.+
T Consensus 385 ------------peGyEf~Hd---~kvlTiFSASNYYe------~GSNrGAYikl~~~--~~PhfvQY~a~k~t 435 (631)
T KOG0377|consen 385 ------------PEGYEFCHD---NKVLTIFSASNYYE------IGSNRGAYIKLGNQ--LTPHFVQYQAAKQT 435 (631)
T ss_pred ------------CCcceeeeC---CeEEEEEeccchhe------ecCCCceEEEeCCC--CCchHHHHHhhhhh
Confidence 699999996 99999999999995 45799999999876 69999999987543
No 15
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=4.1e-65 Score=496.17 Aligned_cols=283 Identities=31% Similarity=0.571 Sum_probs=253.8
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHH
Q 013652 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE 162 (439)
Q Consensus 83 ~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~e 162 (439)
.++++....|+.++..+|++|++++++++ ||+|||||||||.||+++|+..|-|...+ |+|||||||||.+|+|
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~A-----PiTVCGDIHGQf~DLmKLFEVGG~PA~t~-YLFLGDYVDRGyFSiE 133 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEA-----PITVCGDIHGQFFDLMKLFEVGGSPANTR-YLFLGDYVDRGYFSIE 133 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccC-----CeeEecccchHHHHHHHHHHccCCcccce-eEeeccccccceeeee
Confidence 68899999999999999999999999998 99999999999999999999998877665 9999999999999999
Q ss_pred HHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCCCc
Q 013652 163 TFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRS 242 (439)
Q Consensus 163 vl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~~ 242 (439)
|+.+|.+||+.||..+++||||||++.++..+.|..||..||. .++|+++++.|++|||||+.+++++|||||+||
T Consensus 134 CvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYs---e~vYdaCmesFd~LPLAAlmNqQflCVHGGlSP- 209 (517)
T KOG0375|consen 134 CVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS---ERVYDACMESFDCLPLAALMNQQFLCVHGGLSP- 209 (517)
T ss_pred hHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhcc---HHHHHHHHHHhccchHHHHhcCceEEecCCCCc-
Confidence 9999999999999999999999999999999999999999996 589999999999999999999999999999998
Q ss_pred ccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCccC-------CCCCc
Q 013652 243 VSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKL-------GLSEN 315 (439)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~-------g~~~n 315 (439)
.+.+++||++++|+..+|.+ | .+||+|||||.++- -+..|
T Consensus 210 --------------------------Ei~tl~DIr~l~RF~EpPa~----G---pmCDLLWsDPlEdfgnek~~e~f~hN 256 (517)
T KOG0375|consen 210 --------------------------EIHTLDDIRKLDRFKEPPAF----G---PMCDLLWSDPLEDFGNEKTSEHFTHN 256 (517)
T ss_pred --------------------------ccccHHHHHhhhhccCCCcc----C---cchhhhccChhhhccccccccccccC
Confidence 45899999999999755433 3 69999999999753 47789
Q ss_pred CCCCCceeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCC
Q 013652 316 TERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFR 395 (439)
Q Consensus 316 ~~Rg~g~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~ 395 (439)
+.||+++.|...++.+||+.|||--|||+||++|++. |..+..-.+|| ..||||||||||. +.++
T Consensus 257 svRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGY-RMYrksqttGF--------PSLiTiFSAPNYL------DvYn 321 (517)
T KOG0375|consen 257 SVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGY-RMYRKSQTTGF--------PSLITIFSAPNYL------DVYN 321 (517)
T ss_pred ccccccceechHHHHHHHHhCCchhhhhhhhhhhhhh-hhhhcccccCC--------chheeeecCCchh------hhhc
Confidence 9999999999999999999999999999999876543 23333445564 5799999999999 6899
Q ss_pred CcEEEEEEcCCCCCCCcEEEEEecCCCCCCcc
Q 013652 396 NKGAYIVLKPPKFDIPDFNVFEAVTPRPDVRC 427 (439)
Q Consensus 396 N~gA~l~i~~~~~~~~~~~~f~~~~~~~~~~p 427 (439)
|+||||+..++ ...+.||..+ |||---|
T Consensus 322 NKAAvLKYEnN---VMNIRQFncS-PHPYWLP 349 (517)
T KOG0375|consen 322 NKAAVLKYENN---VMNIRQFNCS-PHPYWLP 349 (517)
T ss_pred cHHHHhhhhcc---cceeeccCCC-CCCcccc
Confidence 99999999875 4457899988 8986444
No 16
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=2.7e-62 Score=489.06 Aligned_cols=278 Identities=35% Similarity=0.582 Sum_probs=243.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCC-------CCceeee
Q 013652 78 SEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSK-------NCFFVFN 150 (439)
Q Consensus 78 ~~~~~~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~-------~~~~vfL 150 (439)
.+.+..++.+++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..+++.. +..||||
T Consensus 15 ~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~-----~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfL 89 (311)
T cd07419 15 TDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRA-----PIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFL 89 (311)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCC-----CEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEE
Confidence 4445678999999999999999999999999987 899999999999999999999998754 2459999
Q ss_pred ccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCc---chHHHHHHhhhhcCCCceee
Q 013652 151 GDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDK---GKHAYRKCLGCFEGLPLASL 227 (439)
Q Consensus 151 GDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~---~~~~~~~~~~~f~~LPlaa~ 227 (439)
|||||||++|+||+.+|++||+.+|.++++||||||.+.++..|||..++..+|+.. ...+|..+.++|++||++++
T Consensus 90 GDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~av 169 (311)
T cd07419 90 GDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAI 169 (311)
T ss_pred CCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhhe
Confidence 999999999999999999999999999999999999999999999999999999862 45799999999999999999
Q ss_pred ecCcEEeeccCCCCcccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCC
Q 013652 228 IGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPS 307 (439)
Q Consensus 228 i~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~ 307 (439)
++++++||||||++. +.++++|..+.|+...+ ..+.++.|+|||||.
T Consensus 170 i~~~~l~vHgGi~p~---------------------------~~~l~~i~~i~r~~~~~------~~~~~~~dllWsDP~ 216 (311)
T cd07419 170 IEDKILCMHGGIGRS---------------------------INHVSEIEDLKRPLTME------FGEQVVMDLLWSDPT 216 (311)
T ss_pred ecccEEEEccCCCCC---------------------------CCcHHHHhhcCCCCCCC------CCCcceeeeeccCcc
Confidence 999999999999984 36899999999986332 233478999999999
Q ss_pred cc---CCCCCcC--CCCCc--eeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEc
Q 013652 308 MK---LGLSENT--ERGIG--LLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFS 380 (439)
Q Consensus 308 ~~---~g~~~n~--~Rg~g--~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFS 380 (439)
.. .++.++. .||.| +.||++++++||++||+++||||||+ +.+||++.+ +|+|+||||
T Consensus 217 ~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~iiRgHe~------------~~~G~~~~~---~~~~iTvfS 281 (311)
T cd07419 217 ENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMIIRAHEC------------VMDGFERFA---QGKLITLFS 281 (311)
T ss_pred ccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEEEechh------------hhCCeEEeC---CCeEEEEec
Confidence 74 3565543 38888 69999999999999999999999996 679999876 599999999
Q ss_pred CCCCCCcccccccCCCcEEEEEEcCCCCCCCcEEEE
Q 013652 381 APDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVF 416 (439)
Q Consensus 381 a~nY~~~~~~~~~~~N~gA~l~i~~~~~~~~~~~~f 416 (439)
||||| +.++|+||+++|+.+ .+..|.++
T Consensus 282 a~~y~------~~~~n~~ai~~i~~~--~~~~~~~~ 309 (311)
T cd07419 282 ATNYC------GTAGNAGAILVLGRD--LTIIPKLI 309 (311)
T ss_pred CCccc------CCCCceEEEEEECCC--CcEeEEEe
Confidence 99999 578899999999875 35444444
No 17
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-62 Score=461.40 Aligned_cols=272 Identities=38% Similarity=0.603 Sum_probs=250.3
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChH
Q 013652 82 SVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL 161 (439)
Q Consensus 82 ~~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~ 161 (439)
+.+++.++..+|+.|+++|.+|.++..+.. +++||||+||||++|+++|+..|..+..+ |+|+|||||||++|+
T Consensus 31 k~lse~~v~~lc~~a~~~L~~e~nV~~v~~-----pvtvcGDvHGqf~dl~ELfkiGG~~pdtn-ylfmGDyvdrGy~Sv 104 (319)
T KOG0371|consen 31 KPLSEVDVSSLCLLAKEILDKEENVQPVNC-----PVTVCGDVHGQFHDLIELFKIGGLAPDTN-YLFMGDYVDRGYYSV 104 (319)
T ss_pred CCCccccchhHHHHHHHHHhcccccccccc-----ceEEecCcchhHHHHHHHHHccCCCCCcc-eeeeeeecccccchH
Confidence 467788899999999999999999999987 99999999999999999998877766655 999999999999999
Q ss_pred HHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCCC
Q 013652 162 ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFR 241 (439)
Q Consensus 162 evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~ 241 (439)
|++.+|.++|++||++|.+||||||++.+++.|||++||.+|||.. .+|..|.+.|+.+|+.|.|+++|||.|||++|
T Consensus 105 etVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~a--nvw~~Ftdlfdy~P~tali~~~ifc~HGgLsp 182 (319)
T KOG0371|consen 105 ETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNA--NVWKYFTDLFDYLPLTALIESKIFCLHGGLSP 182 (319)
T ss_pred HHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccc--cchHHhhhhhhccchHhhhccceeeccCCcCc
Confidence 9999999999999999999999999999999999999999999975 89999999999999999999999999999998
Q ss_pred cccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCccCCCCCcCCCCCc
Q 013652 242 SVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGIG 321 (439)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g 321 (439)
+. .+++.++.+.|. .+.|.+ ++ ++|+|||||....||..+ +||+|
T Consensus 183 si---------------------------~tld~~r~~dr~-~evphe---gp---mcDlLwsdpddr~gwg~s-prgag 227 (319)
T KOG0371|consen 183 SI---------------------------DTLDLIRLLDRI-QEVPHE---GP---MCDLLWSDPDDRCGWGIS-PRGAG 227 (319)
T ss_pred cc---------------------------chHHHHHHHHHh-hcccCC---CC---hhheeccCcccCCCCCCC-CCCCC
Confidence 54 789999999884 455555 43 889999999999999986 79999
Q ss_pred eeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEEE
Q 013652 322 LLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYI 401 (439)
Q Consensus 322 ~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~l 401 (439)
+.||.++.++|-.+||+++|-|+||- +.+||.|.|. ..++|+||||||| ++.+|.+|++
T Consensus 228 ~tfg~di~~~fn~~n~lslisRahql------------vm~g~nW~~~---~~~vtiFSapnyc------Yrcgn~a~i~ 286 (319)
T KOG0371|consen 228 YTFGQDISEQFNHKNGLSLISRAHQL------------VMEGYNWYHL---WNVVTIFSAPNYC------YRCGNQAAIM 286 (319)
T ss_pred cccchhhHHHhhccCCchHhHHHHHH------------Hhcccceeee---cceeEEccCCchh------hccccHHHHh
Confidence 99999999999999999999999994 6899999996 6777999999999 7899999999
Q ss_pred EEcCCCCCCCcEEEEEec
Q 013652 402 VLKPPKFDIPDFNVFEAV 419 (439)
Q Consensus 402 ~i~~~~~~~~~~~~f~~~ 419 (439)
.++.. ..-.|.||+.+
T Consensus 287 e~d~~--~~~~f~q~~ps 302 (319)
T KOG0371|consen 287 ERDDT--KNYDFLQFDPS 302 (319)
T ss_pred hhhhc--cCcceEEecCC
Confidence 99864 56789999985
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=8.2e-62 Score=493.03 Aligned_cols=363 Identities=38% Similarity=0.628 Sum_probs=318.4
Q ss_pred CCCCcccccccccCCCCCCCccccccccccc-ccCC---C-CCCCCCC-CCCCCCCC--CCCCCCHHHHHHHHHHhhhcC
Q 013652 1 MPNKKESDTTVSSLPSDESNPTISSTIASTE-HSKG---N-KPLSSAP-VQIPISYP--EDGMLTVEWIQDLTLTFDWSS 72 (439)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~-~~~~~~~-~~~~~~~p--~~~~~~~~~i~~l~~~~~~~~ 72 (439)
+||++++-+.+-+|-+-.+.-.|+.+|...+ +.++ + .....++ .+..+.-| +..++|.+||.++++.++.++
T Consensus 102 ~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~~~~i~~~y~g~~le~~kvt~e~vk~~~~~~~~~~ 181 (476)
T KOG0376|consen 102 APNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEEDMDLIESDYSGPVLEDHKVTLEFVKTLMEVFKNQK 181 (476)
T ss_pred CcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCccccccccccccccccccccCCcccccchhhHHHHHHHHHhhhccc
Confidence 6999999999999999999999999999555 3332 1 1222222 23333333 445899999999998876553
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeecc
Q 013652 73 RNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGD 152 (439)
Q Consensus 73 ~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGD 152 (439)
.++...+..|+..+..++.++|++++++. +.+.++.|+||+|||+++++++++..|.|+....|+|.||
T Consensus 182 ----------~L~~k~a~~i~~~~~~~~~~l~~~ve~~~-~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngd 250 (476)
T KOG0376|consen 182 ----------KLPKKYAYSILDLAKTILRKLPSLVEISV-PGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGD 250 (476)
T ss_pred ----------ccccccceeeHHHHhhHHhcCCcceEeec-CCCceEEecCCccccccchhhhHhhcCCCCCcccccccCc
Confidence 56777888999999999999999999996 8899999999999999999999999999999999999999
Q ss_pred ccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcE
Q 013652 153 YVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHV 232 (439)
Q Consensus 153 yVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i 232 (439)
+||||.+|.|++..+++.|+.+|+++|++|||||+..|+..|||.+++..+|.. +.+..+.+.|.+||++..|++++
T Consensus 251 fv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte---~~~~~f~~~f~~LPl~~~i~~~~ 327 (476)
T KOG0376|consen 251 FVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTE---EMFNLFSEVFIWLPLAHLINNKV 327 (476)
T ss_pred eeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHH---HHHHhhhhhhccccchhhhcCce
Confidence 999999999999999999999999999999999999999999999999999964 67777789999999999999999
Q ss_pred EeeccCCCCcccCCCCCCcCCCCCCccccCCCCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCccCCC
Q 013652 233 FTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGL 312 (439)
Q Consensus 233 ~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~ 312 (439)
+.+|||+++..+ .+++|+++|.|+..+ +++.+++++|||||...+|.
T Consensus 328 ~~~hgglf~~~~--------------------------v~l~d~r~i~r~~~~-------~~~~~~~~~lws~pq~~~g~ 374 (476)
T KOG0376|consen 328 LVMHGGLFSPDG--------------------------VTLEDFRNIDRFEQP-------PEEGLMCELLWSDPQPANGR 374 (476)
T ss_pred EEEecCcCCCCC--------------------------ccHHHHHhhhhccCC-------cccccccccccCCCccccCC
Confidence 999999987542 479999999998543 44558999999999999999
Q ss_pred CCcCCCCCceeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccc
Q 013652 313 SENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEE 392 (439)
Q Consensus 313 ~~n~~Rg~g~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~ 392 (439)
.++ .||.|+.||+|++++||+.|+++.||||||++ +.||++.| +|+|+||||||||| .
T Consensus 375 s~S-~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~------------d~gy~~eh---~g~l~tvfsapnyc------d 432 (476)
T KOG0376|consen 375 SPS-KRGVGLQFGPDVTERFLQDNNLDKIIRSHEVK------------DEGYEVEH---SGKLITVFSAPNYC------D 432 (476)
T ss_pred Ccc-ccCceeeeCCCchhhHHhhcchHHHhhccccC------------CCceeeec---CCcEEEEecCcchh------h
Confidence 987 69999999999999999999999999999974 68999999 59999999999999 6
Q ss_pred cCCCcEEEEEEcCCCCCCCcEEEEEecCCCCCCccccccccCC
Q 013652 393 RFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVRCLLVYTFGK 435 (439)
Q Consensus 393 ~~~N~gA~l~i~~~~~~~~~~~~f~~~~~~~~~~p~~~~~~~~ 435 (439)
+++|.||++.+++.+ .+|++++|+++ |||+++|| +|.=+.
T Consensus 433 ~~~n~ga~i~~~~~~-~~p~~~~~e~v-p~~~~~~m-a~~ns~ 472 (476)
T KOG0376|consen 433 QMGNKGAFIHLEPDD-LTPNFYTFEAV-PHPDVKPM-AYANSL 472 (476)
T ss_pred hcCCcceEEEecCCC-CccceeecccC-CCCCCCCc-cccccc
Confidence 789999999999755 69999999999 99999999 554443
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=3.5e-32 Score=258.64 Aligned_cols=217 Identities=41% Similarity=0.618 Sum_probs=166.4
Q ss_pred EEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccccccccchH
Q 013652 119 VVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEK 198 (439)
Q Consensus 119 ~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~ 198 (439)
+|||||||++++|.++++..+....+. +||||||||||+.+.+++.+++.++.. |.++++|+||||.+.++..+++..
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~-li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~ 78 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDK-LIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYD 78 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCE-EEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcc
Confidence 589999999999999999998865554 999999999999999999999998876 889999999999999887766654
Q ss_pred HHH------HHhcCcchHHHHHHhhhhcCCCceeeecC-cEEeeccCCCCcccCCCCCCcCCCCCCccccCCCCCCCCCC
Q 013652 199 EVM------AKYGDKGKHAYRKCLGCFEGLPLASLIGK-HVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLG 271 (439)
Q Consensus 199 e~~------~~~g~~~~~~~~~~~~~f~~LPlaa~i~~-~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (439)
+.. .........++..+.++|..||+++.++. +++|||||+++.. .
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~---------------------------~ 131 (225)
T cd00144 79 EDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGL---------------------------P 131 (225)
T ss_pred hhhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCcc---------------------------c
Confidence 321 11111245778889999999999999987 8999999998743 1
Q ss_pred CHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCccCCCCCcCCCCCceeeChhhHHHHHHHcCCeEEEEeccCCCCc
Q 013652 272 SFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDAR 351 (439)
Q Consensus 272 sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~ 351 (439)
....+. . . ..+....+++|++|...........++. |+++.+.|+..++.++|||||++
T Consensus 132 ~~~~~~-----~-~-------~~~~~~~~~lw~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~---- 190 (225)
T cd00144 132 LEEQIK-----E-E-------PEDQLPEDLLWSDPLELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTP---- 190 (225)
T ss_pred hHHhhh-----c-C-------cccccceeeeecCCCCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCcc----
Confidence 111111 0 0 1223578999999987655444333444 99999999999999999999997
Q ss_pred CCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEEEE
Q 013652 352 QKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIV 402 (439)
Q Consensus 352 ~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~l~ 402 (439)
+..|+.+. ..++++||+|++.|+ +..+|..+.+.
T Consensus 191 --------~~~~~~~~---~~~~~i~IDtg~~~~------~~~~~~l~~~~ 224 (225)
T cd00144 191 --------VEEGYEFG---HDGNLITIDSGCNYC------GGGGNKLAALV 224 (225)
T ss_pred --------ccCccEEc---CCCCEEEEecCCccc------CCCCccEEEEe
Confidence 35565432 248899999999997 34566666553
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.94 E-value=3.3e-26 Score=222.06 Aligned_cols=125 Identities=22% Similarity=0.381 Sum_probs=98.4
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCC--------CCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCcc
Q 013652 116 SRVVVVGDVHGQLHDVLFLLRDAGFP--------SKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHES 187 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~il~~~g~~--------~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~ 187 (439)
|+++||||||||++.|.++|+++++. +.++++||||||||||++|.|||.+|+.+. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 58999999999999999999998874 344569999999999999999999998874 45689999999999
Q ss_pred cccccccc-------chHHHHHHhcCc----chHHHHHHhhhhcCCCceeeec-CcEEeeccCCCCc
Q 013652 188 KYCTSVYG-------FEKEVMAKYGDK----GKHAYRKCLGCFEGLPLASLIG-KHVFTAHGGLFRS 242 (439)
Q Consensus 188 ~~~~~~yg-------f~~e~~~~~g~~----~~~~~~~~~~~f~~LPlaa~i~-~~i~~vHGGi~~~ 242 (439)
++++...+ ...+....|... ...+++.+.++|++||++.+++ +++++||||+.+.
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 87654321 112223334321 2357788999999999998774 6799999999764
No 21
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.92 E-value=6.2e-25 Score=210.20 Aligned_cols=118 Identities=23% Similarity=0.315 Sum_probs=90.9
Q ss_pred EEEccCCCCHHHHHHHHHhcCCCC-------CCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCcccccc
Q 013652 119 VVVGDVHGQLHDVLFLLRDAGFPS-------KNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCT 191 (439)
Q Consensus 119 ~VvGDIHG~~~dL~~il~~~g~~~-------~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~ 191 (439)
+||||||||++.|.++|+++++.. ..+++|||||||||||+|.|||.+|+.+.. +.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 799999999999999999988752 244699999999999999999999998753 45899999999998874
Q ss_pred ccccc-----------------hHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCC
Q 013652 192 SVYGF-----------------EKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLF 240 (439)
Q Consensus 192 ~~ygf-----------------~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~ 240 (439)
...+. ..+..+.++. ..+.++...+||++||++...+ ++++||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~l~~lP~~~~~~-~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFRE-HSEEHKDWLEWFKTLPLFLDLG-GVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhc-cchhHHHHHHHHhcCCcEEEEC-CEEEEECCcC
Confidence 32211 0112222322 1345678899999999998775 5777999985
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.92 E-value=5.3e-25 Score=212.11 Aligned_cols=123 Identities=27% Similarity=0.435 Sum_probs=99.0
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCC---------CCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCc
Q 013652 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSK---------NCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHE 186 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~il~~~g~~~~---------~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE 186 (439)
|||.||||||||+.+|.++|+++++... .+++||||||||||++|.||+.+|++++. +.++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 5899999999999999999999987632 35699999999999999999999998854 357999999999
Q ss_pred ccccccc--------ccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeec-CcEEeeccCCCC
Q 013652 187 SKYCTSV--------YGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIG-KHVFTAHGGLFR 241 (439)
Q Consensus 187 ~~~~~~~--------ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~-~~i~~vHGGi~~ 241 (439)
.++++.. .|+. +....+......+.+.+.+||+.||+...++ ++++|||||+++
T Consensus 79 ~~l~~~~~~~~~~~~~~~~-~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~ 141 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLE-ETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKE 141 (234)
T ss_pred HHHHHHhcCCCccccCccc-chHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCCh
Confidence 9876542 2332 2233444334567788999999999988775 579999999875
No 23
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.91 E-value=5.7e-24 Score=202.93 Aligned_cols=128 Identities=25% Similarity=0.331 Sum_probs=96.2
Q ss_pred eEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCC
Q 013652 106 CVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNH 185 (439)
Q Consensus 106 ~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNH 185 (439)
+..+.. +..++++||||||||+..|.++|+.+++.+..+.++||||||||||+|.|||.+|.. .++++|+|||
T Consensus 8 ~~~~~~-~~~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNH 80 (218)
T PRK11439 8 YQRIAG-HQWRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNH 80 (218)
T ss_pred eecccC-CCCCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCch
Confidence 345554 567799999999999999999999998875555699999999999999999999865 3688999999
Q ss_pred ccccccccccchHHHHHHhc--------CcchHHHHHHhhhhcCCCceeee---cCcEEeeccCCC
Q 013652 186 ESKYCTSVYGFEKEVMAKYG--------DKGKHAYRKCLGCFEGLPLASLI---GKHVFTAHGGLF 240 (439)
Q Consensus 186 E~~~~~~~ygf~~e~~~~~g--------~~~~~~~~~~~~~f~~LPlaa~i---~~~i~~vHGGi~ 240 (439)
|.++++...+-....+...| ......+....++++.||+...+ ++++++||||++
T Consensus 81 E~~~l~~~~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 81 EQMALDALASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred HHHHHHHHHCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 99887643221111122222 11223456677999999998765 356888999984
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.91 E-value=1.7e-24 Score=213.01 Aligned_cols=122 Identities=18% Similarity=0.255 Sum_probs=97.3
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCcccccccccc
Q 013652 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYG 195 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~yg 195 (439)
|+++||||||||+..|.++++++++.+..+.++|||||||||++|.||+.+|..+ +.++++|+||||.+++...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 6899999999999999999999987655566999999999999999999999876 357999999999988776666
Q ss_pred chHH----HHHHhcCcchHHHHHHhhhhcCCCceeee-cCcEEeeccCCCCcc
Q 013652 196 FEKE----VMAKYGDKGKHAYRKCLGCFEGLPLASLI-GKHVFTAHGGLFRSV 243 (439)
Q Consensus 196 f~~e----~~~~~g~~~~~~~~~~~~~f~~LPlaa~i-~~~i~~vHGGi~~~~ 243 (439)
+... ....+- .....+.+.+|++.+|+...+ ++++++||||++|..
T Consensus 77 ~~~~~~~~~l~~~l--~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~ 127 (275)
T PRK00166 77 IKRNKKKDTLDPIL--EAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQW 127 (275)
T ss_pred CccccchhHHHHHH--ccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCC
Confidence 4311 111111 113345678999999998886 567899999998754
No 25
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.90 E-value=3.1e-23 Score=203.42 Aligned_cols=75 Identities=28% Similarity=0.451 Sum_probs=64.2
Q ss_pred cEEEEccCCCCHHHHHHHHHhcCCC-----CCCCceeeeccccCCCCChHHHHHHHHHhhhhCCC-cEEEeccCCccccc
Q 013652 117 RVVVVGDVHGQLHDVLFLLRDAGFP-----SKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPH-RVYLLRGNHESKYC 190 (439)
Q Consensus 117 ~i~VvGDIHG~~~dL~~il~~~g~~-----~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~-~v~lLrGNHE~~~~ 190 (439)
++++||||||+++.|.++|+.+... .....+||||||||||++|.+|+.+|++++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 7999999999999999999865421 22345999999999999999999999999888876 68999999998765
Q ss_pred c
Q 013652 191 T 191 (439)
Q Consensus 191 ~ 191 (439)
.
T Consensus 83 ~ 83 (304)
T cd07421 83 A 83 (304)
T ss_pred h
Confidence 3
No 26
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.90 E-value=1.1e-23 Score=205.28 Aligned_cols=120 Identities=20% Similarity=0.277 Sum_probs=96.6
Q ss_pred EEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccccccccch
Q 013652 118 VVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFE 197 (439)
Q Consensus 118 i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~ 197 (439)
++||||||||+..|.++|+++++.+..+.++|+|||||||++|+||+.+|++++ .++++|+||||.+.++..+|+.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999987656669999999999999999999999875 5899999999999887666543
Q ss_pred HH----HHHHhcCcchHHHHHHhhhhcCCCceeeecC-cEEeeccCCCCcc
Q 013652 198 KE----VMAKYGDKGKHAYRKCLGCFEGLPLASLIGK-HVFTAHGGLFRSV 243 (439)
Q Consensus 198 ~e----~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~-~i~~vHGGi~~~~ 243 (439)
.. ....+- .....+.+.+|++++|++..+++ ++++|||||+|..
T Consensus 77 ~~~~~~t~~~~l--~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w 125 (257)
T cd07422 77 KPKKKDTLDDIL--NAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQW 125 (257)
T ss_pred ccccHhHHHHHH--hccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCC
Confidence 11 111110 11234568899999999998875 7899999999854
No 27
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.89 E-value=8.4e-23 Score=193.15 Aligned_cols=120 Identities=28% Similarity=0.315 Sum_probs=96.0
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCcccccccccc
Q 013652 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYG 195 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~yg 195 (439)
++|+|||||||++.+|.++++..++....+.++|+|||||||+++.|++.+|.. .++++++||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 389999999999999999999988765455699999999999999999998865 36899999999998876544
Q ss_pred --chHHHHHHhcCc------chHHHHHHhhhhcCCCceeeec---CcEEeeccCCCC
Q 013652 196 --FEKEVMAKYGDK------GKHAYRKCLGCFEGLPLASLIG---KHVFTAHGGLFR 241 (439)
Q Consensus 196 --f~~e~~~~~g~~------~~~~~~~~~~~f~~LPlaa~i~---~~i~~vHGGi~~ 241 (439)
...+.+.+++.. ...+++...+||++||+...++ .++++||||+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~ 131 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPS 131 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCc
Confidence 333444444432 1225666888999999999874 478999999864
No 28
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.89 E-value=4.4e-23 Score=195.58 Aligned_cols=122 Identities=25% Similarity=0.325 Sum_probs=90.5
Q ss_pred EEEccCCCCHHHHHHHHHhcCCC-------CCCCceeeeccccCCCCChHHHHHHHHHhhhh---CCCcEEEeccCCccc
Q 013652 119 VVVGDVHGQLHDVLFLLRDAGFP-------SKNCFFVFNGDYVDRGAWGLETFLLLLAWKVF---LPHRVYLLRGNHESK 188 (439)
Q Consensus 119 ~VvGDIHG~~~dL~~il~~~g~~-------~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~---~p~~v~lLrGNHE~~ 188 (439)
+|||||||+++.|.++|+.+++. ...+.+||+||+||||+++.||+.+|+.|+.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 58999999999999999998752 34456999999999999999999999998754 356899999999999
Q ss_pred cccccccch--HHHHHHhcC--cchHHH---HHHhhhhcCCCceeeecCcEEeeccCCCC
Q 013652 189 YCTSVYGFE--KEVMAKYGD--KGKHAY---RKCLGCFEGLPLASLIGKHVFTAHGGLFR 241 (439)
Q Consensus 189 ~~~~~ygf~--~e~~~~~g~--~~~~~~---~~~~~~f~~LPlaa~i~~~i~~vHGGi~~ 241 (439)
.++..+.+. .+....... ....++ ..+.+|++.+|+...+++ +++||||+.+
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~~-~~fvHag~~~ 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVND-TLFVHGGLGP 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEECC-EEEEeCCcHH
Confidence 987543321 111111100 001111 245789999999998876 5569999854
No 29
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.87 E-value=2.9e-22 Score=196.19 Aligned_cols=122 Identities=22% Similarity=0.301 Sum_probs=99.4
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCcccccccccc
Q 013652 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYG 195 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~yg 195 (439)
|.++||||||||++.|.++|+++++.+..+.++|+||+|||||+|+||+.++.++. .++++|+||||.+.+...+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 57999999999999999999999987666669999999999999999999998863 56889999999998887766
Q ss_pred ch-----HHHHHHhcCcchHHHHHHhhhhcCCCceeeec-CcEEeeccCCCCccc
Q 013652 196 FE-----KEVMAKYGDKGKHAYRKCLGCFEGLPLASLIG-KHVFTAHGGLFRSVS 244 (439)
Q Consensus 196 f~-----~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~-~~i~~vHGGi~~~~~ 244 (439)
+. +.....+ .....+.+.+|++++|+..... .++++|||||+|..+
T Consensus 77 ~~~~~~~d~l~~~l---~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 77 ISRNKPKDRLDPLL---EAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CCccCchHHHHHHH---HccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 52 2222212 1244577899999999987654 468889999998653
No 30
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.87 E-value=8.5e-22 Score=188.05 Aligned_cols=128 Identities=23% Similarity=0.259 Sum_probs=93.1
Q ss_pred eEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCC
Q 013652 106 CVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNH 185 (439)
Q Consensus 106 ~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNH 185 (439)
+.++.. +...|++||||||||+..|+++++...+....+.++|+|||||||++|.||+.+|.+ .++++|||||
T Consensus 6 ~~~~~~-~~~~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNH 78 (218)
T PRK09968 6 YQKINA-HHYRHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNH 78 (218)
T ss_pred eeeccC-CCCCeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECch
Confidence 445554 556699999999999999999999988665556699999999999999999998854 3689999999
Q ss_pred ccccccccccchHHHHHHhcCc--------chHHHHHHhhhhcCCCceeeec---CcEEeeccCCC
Q 013652 186 ESKYCTSVYGFEKEVMAKYGDK--------GKHAYRKCLGCFEGLPLASLIG---KHVFTAHGGLF 240 (439)
Q Consensus 186 E~~~~~~~ygf~~e~~~~~g~~--------~~~~~~~~~~~f~~LPlaa~i~---~~i~~vHGGi~ 240 (439)
|.++++....-....+...|.. ..........++++||+...+. .++++||||++
T Consensus 79 E~~~~~~~~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 79 EAMALDAFETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred HHHHHHHHhcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 9988753211001111111111 1123344567999999988763 46888999984
No 31
>PHA02239 putative protein phosphatase
Probab=99.86 E-value=1.3e-21 Score=188.60 Aligned_cols=125 Identities=23% Similarity=0.291 Sum_probs=92.0
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCC-CCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccccccc
Q 013652 116 SRVVVVGDVHGQLHDVLFLLRDAGFPS-KNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVY 194 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~il~~~g~~~-~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~y 194 (439)
|++++||||||++..|.++++.+.... ..+.+||+|||||||+.|.+++.+|+.+. ..+.++++|+||||.+++....
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHHh
Confidence 689999999999999999999875331 23459999999999999999999998875 3456899999999998754321
Q ss_pred c-----c---------hHHHHHHhcCcc----------------------------hHHHHHHhhhhcCCCceeeecCcE
Q 013652 195 G-----F---------EKEVMAKYGDKG----------------------------KHAYRKCLGCFEGLPLASLIGKHV 232 (439)
Q Consensus 195 g-----f---------~~e~~~~~g~~~----------------------------~~~~~~~~~~f~~LPlaa~i~~~i 232 (439)
+ . ..+....||... ...+..+..|++.||+....++ +
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~~-~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKEDK-Y 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEECC-E
Confidence 0 1 122334554220 1133455679999999988765 6
Q ss_pred EeeccCCCCc
Q 013652 233 FTAHGGLFRS 242 (439)
Q Consensus 233 ~~vHGGi~~~ 242 (439)
++||||+.|.
T Consensus 159 ifVHAGi~p~ 168 (235)
T PHA02239 159 IFSHSGGVSW 168 (235)
T ss_pred EEEeCCCCCC
Confidence 6699999763
No 32
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=99.55 E-value=2.7e-16 Score=161.11 Aligned_cols=332 Identities=20% Similarity=0.065 Sum_probs=255.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCC
Q 013652 78 SEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRG 157 (439)
Q Consensus 78 ~~~~~~l~~~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG 157 (439)
.++.+.+..+++..+++.+.+++..+||+..+-. +..--.+.++|.||++.|+.++++.- |.....|++-|++++++
T Consensus 9 ~ean~~l~~~~fd~avdlysKaI~ldpnca~~~a-nRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l 85 (476)
T KOG0376|consen 9 NEANEALKDKVFDVAVDLYSKAIELDPNCAIYFA-NRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMAL 85 (476)
T ss_pred hHHhhhcccchHHHHHHHHHHHHhcCCcceeeec-hhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhH
Confidence 3445678888999999999999999999999877 44456899999999999999999876 55566799999999999
Q ss_pred CChHHHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcEEeecc
Q 013652 158 AWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHG 237 (439)
Q Consensus 158 ~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHG 237 (439)
.+..+.+..|...+...|+...+.|++||+..+...++|..++...++.....++..+...+.. |++..+++.++ -|.
T Consensus 86 ~~~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~~~-~i~~~y~g~~l-e~~ 163 (476)
T KOG0376|consen 86 GEFKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEEDMD-LIESDYSGPVL-EDH 163 (476)
T ss_pred HHHHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccccccc-ccccccCCccc-ccc
Confidence 9999999999999999999999999999999999999999988888876654454434333322 25555555544 222
Q ss_pred CCCCcccCCCCCCcCCCCC-CccccCC-CCCCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCccCCCCCc
Q 013652 238 GLFRSVSHAPSKKPKGKKK-NNVVFNP-ETNPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSEN 315 (439)
Q Consensus 238 Gi~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n 315 (439)
-+.-.. .+. .....++ .+...-..++.+..+..+..+++.++ .. +-.|..|+++....|-..+
T Consensus 164 kvt~e~----------vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve---~~--~~~d~~~sv~gd~hGqfyd 228 (476)
T KOG0376|consen 164 KVTLEF----------VKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVE---IS--VPGDVKISVCGDTHGQFYD 228 (476)
T ss_pred hhhHHH----------HHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceE---ee--cCCCceEEecCCccccccc
Confidence 111000 000 0000010 11111234444444444444455444 22 5689999999999999999
Q ss_pred CCCCCceeeChhhHHHHHHHcCCeEEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCCCcccccccCC
Q 013652 316 TERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFR 395 (439)
Q Consensus 316 ~~Rg~g~~fG~~~~~~FL~~~~l~~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~ 395 (439)
..++.+..|+++.+..||...++.-+++.|.-+.....+-+...++.+|...|+-+++.+.++|+++.++.++-++..++
T Consensus 229 l~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~ 308 (476)
T KOG0376|consen 229 LLNIFELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFN 308 (476)
T ss_pred hhhhHhhcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHH
Confidence 99999999999999999999999999999998888888888888999998888778899999999999998877777888
Q ss_pred Cc-EEEEEEcCCCCCCCcEEEEEecCCCCCCcccc
Q 013652 396 NK-GAYIVLKPPKFDIPDFNVFEAVTPRPDVRCLL 429 (439)
Q Consensus 396 N~-gA~l~i~~~~~~~~~~~~f~~~~~~~~~~p~~ 429 (439)
|. +++..+--.......|..+....++|+-.++.
T Consensus 309 ~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~l~ 343 (476)
T KOG0376|consen 309 LFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVTLE 343 (476)
T ss_pred hhhhhhccccchhhhcCceEEEecCcCCCCCccHH
Confidence 88 88888876677788899999999999887773
No 33
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.26 E-value=2.4e-11 Score=105.83 Aligned_cols=77 Identities=29% Similarity=0.355 Sum_probs=56.8
Q ss_pred CcEEEEccCCCCHHHH---HHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHH--HHhhhhCCCcEEEeccCCccccc
Q 013652 116 SRVVVVGDVHGQLHDV---LFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLL--LAWKVFLPHRVYLLRGNHESKYC 190 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL---~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL--~~lk~~~p~~v~lLrGNHE~~~~ 190 (439)
+||+++||+|+..... ...+.........+.+|++||++|+|..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4899999999999987 333333222233345999999999999988877765 44555677899999999999865
Q ss_pred cc
Q 013652 191 TS 192 (439)
Q Consensus 191 ~~ 192 (439)
..
T Consensus 81 ~~ 82 (200)
T PF00149_consen 81 NS 82 (200)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.04 E-value=6.7e-10 Score=102.87 Aligned_cols=69 Identities=23% Similarity=0.302 Sum_probs=54.1
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCC--------hHHHHHHHHHhhhhCCCcEEEeccCCcc
Q 013652 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAW--------GLETFLLLLAWKVFLPHRVYLLRGNHES 187 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~--------s~evl~lL~~lk~~~p~~v~lLrGNHE~ 187 (439)
|+|.|+||+||++..+.++++.+.....+. ++++||++|+|+. ..+++..|..+ ...+++++||||.
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~-ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~ 75 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADW-LVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDS 75 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCE-EEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcc
Confidence 689999999999999999888764434444 9999999999874 45666666443 2479999999997
Q ss_pred cc
Q 013652 188 KY 189 (439)
Q Consensus 188 ~~ 189 (439)
..
T Consensus 76 ~~ 77 (182)
T PRK09453 76 EV 77 (182)
T ss_pred hh
Confidence 53
No 35
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.85 E-value=8.3e-09 Score=92.50 Aligned_cols=59 Identities=25% Similarity=0.334 Sum_probs=48.1
Q ss_pred cEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccc
Q 013652 117 RVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 117 ~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~ 188 (439)
+|.++||+||+...+.++++.+.. .+ .++++||+++++.... + .....+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d-~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VD-LIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CC-EEEECCccccccccch--------h--hcCCcEEEEeCCCCCc
Confidence 588999999999999999998754 33 4999999999998765 1 1234699999999985
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.84 E-value=5.2e-08 Score=86.55 Aligned_cols=61 Identities=31% Similarity=0.495 Sum_probs=45.5
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCcccc
Q 013652 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~ 189 (439)
|||.++||+|++...+.++++.+. . .+.++++||++|+ .+++..+..+ .+++++||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~~--~-~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYIN--E-PDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHHT--T-ESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHHHhc--C-CCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCccccc
Confidence 689999999999999999999882 2 3449999999993 7777777543 6999999999653
No 37
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.76 E-value=2.2e-08 Score=90.52 Aligned_cols=64 Identities=19% Similarity=0.303 Sum_probs=48.7
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccc
Q 013652 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~ 188 (439)
|++.|++|+||++.++..+++........+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 689999999999988777766655442334499999999 467777765542 3599999999984
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.63 E-value=5.4e-07 Score=79.21 Aligned_cols=61 Identities=21% Similarity=0.366 Sum_probs=40.4
Q ss_pred cEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChH--HHHHHHHHhhhhCCCcEEEeccCCccc
Q 013652 117 RVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL--ETFLLLLAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 117 ~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~--evl~lL~~lk~~~p~~v~lLrGNHE~~ 188 (439)
+|.++||+||++. . ...... +.+|++||++++|.... +.+.++..++ . ..++++.||||..
T Consensus 1 ~i~~isD~H~~~~----~---~~~~~~-D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~ 63 (135)
T cd07379 1 RFVCISDTHSRHR----T---ISIPDG-DVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLT 63 (135)
T ss_pred CEEEEeCCCCCCC----c---CcCCCC-CEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCc
Confidence 4889999999986 1 122233 44999999999986532 2444443332 1 2367899999964
No 39
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.61 E-value=1.7e-07 Score=90.58 Aligned_cols=111 Identities=24% Similarity=0.301 Sum_probs=75.3
Q ss_pred cEEEEccCCCCHHHHH-HHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCcccccccc--
Q 013652 117 RVVVVGDVHGQLHDVL-FLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSV-- 193 (439)
Q Consensus 117 ~i~VvGDIHG~~~dL~-~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~-- 193 (439)
+|+++|||||++.... +.++..+ . +.+|++||+++. +.+++..|..+ +..+++++||||.......
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~~---p-D~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~ 70 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLLQ---P-DLVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYDATFRK 70 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhccC---C-CEEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCcccccccccc
Confidence 7999999999987642 3344332 2 359999999864 57777766554 3459999999998653200
Q ss_pred ------------------cc------------------------c-hHHHHHHhcCcchHHHHHHhhhhcCCCceeeecC
Q 013652 194 ------------------YG------------------------F-EKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGK 230 (439)
Q Consensus 194 ------------------yg------------------------f-~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~ 230 (439)
++ + ..++...|+. ...++.+...++.++.+.....
T Consensus 71 k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi--~s~~eA~~~ive~~~~~~~~~~ 148 (238)
T cd07397 71 KGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGV--ISLEESAQRIIAAAKKAPPDLP 148 (238)
T ss_pred hHHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCC--CCHHHHHHHHHHHhhhcCCCCC
Confidence 00 1 1256677763 3667777788888864444455
Q ss_pred cEEeeccCCC
Q 013652 231 HVFTAHGGLF 240 (439)
Q Consensus 231 ~i~~vHGGi~ 240 (439)
.||+.|+++.
T Consensus 149 ~VliaH~~~~ 158 (238)
T cd07397 149 LILLAHNGPS 158 (238)
T ss_pred eEEEeCcCCc
Confidence 8999999985
No 40
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.58 E-value=3.1e-07 Score=88.19 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=56.7
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccc
Q 013652 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~ 188 (439)
++|.+++||||++..|.++++.+.....+. +|++||++++|+..-++..++..+.. .+..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~-vv~~GDl~~~g~~~~~~~~~l~~l~~-l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADA-IVLIGNLLPKAAKSEDYAAFFRILGE-AHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCE-EEECCCCCCCCCCHHHHHHHHHHHHh-cCCceEEEcCCCChH
Confidence 689999999999999999998764334444 99999999999777777766665542 234699999999974
No 41
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.52 E-value=2.3e-07 Score=80.61 Aligned_cols=146 Identities=30% Similarity=0.370 Sum_probs=103.5
Q ss_pred ccccccchHHHHHHhcCcchHHHHH---HhhhhcCCCceeeecC-cEEeeccCCCCcccCCCCCCcCCCCCCccccCCCC
Q 013652 190 CTSVYGFEKEVMAKYGDKGKHAYRK---CLGCFEGLPLASLIGK-HVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPET 265 (439)
Q Consensus 190 ~~~~ygf~~e~~~~~g~~~~~~~~~---~~~~f~~LPlaa~i~~-~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (439)
++..+++..++..+++.. ..|.. ..++|+.||+.++++. .++|.||++++..
T Consensus 3 l~~~~~~~~~~~~~~~~~--~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~---------------------- 58 (155)
T COG0639 3 LTALYGFYDEKLRKYGEE--LEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGL---------------------- 58 (155)
T ss_pred hhhhhchhHHhhhhcCCc--eeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcch----------------------
Confidence 455678888877777642 24555 9999999999999998 9999999998742
Q ss_pred CCCCCCCHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCc--cCCCCCcCCCCCceeeChhhHHHHHHHcCCeEEEE
Q 013652 266 NPLSLGSFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSM--KLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIR 343 (439)
Q Consensus 266 ~~~~~~sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~--~~g~~~n~~Rg~g~~fG~~~~~~FL~~~~l~~IIR 343 (439)
...++.+..+.|..... . .....+.+.+|+++.. ...|.+. .+|.+..+ .+.+..|+..+..+.+.|
T Consensus 59 ----~~~~~~~~~~~r~~~~~--~---~~~g~~~~~~~~~~~~~~~~~w~~~-~~g~~~~~-~~~~~~f~~~~~~~~~~~ 127 (155)
T COG0639 59 ----DRLLDIIEVLDRLRACE--V---PHAGHTHDLLWSDPDGGDRRIWNPG-PRGVPRDG-GDVTAVFGIVHTPKLIER 127 (155)
T ss_pred ----hhhHHHHHHHhhhhccc--C---CCccccccccCCCCCCCcccccccC-CCCCCccc-cchhhHHhhhcccceEEE
Confidence 13556666665543110 0 1112355669999886 4566665 58887777 788999998888888999
Q ss_pred eccCCCCcCCCCCCccccCCceeeccCCCCeEEEEEcCCCCC
Q 013652 344 SHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYP 385 (439)
Q Consensus 344 gHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa~nY~ 385 (439)
+|+. ++.++...+ ++..+|+|++++|+
T Consensus 128 ~~~~------------~~~d~~~~~---~~~~lt~~~~~~~~ 154 (155)
T COG0639 128 AHVL------------YDIDTGAVF---GGGLLTAFSAPNYC 154 (155)
T ss_pred EeEE------------EecCceEEe---CCCeeeEEeccccc
Confidence 9996 344444433 22788999999997
No 42
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.47 E-value=4.7e-06 Score=76.27 Aligned_cols=64 Identities=20% Similarity=0.267 Sum_probs=44.5
Q ss_pred EEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCCh-HHHHHHHHHhhhhCCCcEEEeccCCccc
Q 013652 118 VVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-LETFLLLLAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 118 i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s-~evl~lL~~lk~~~p~~v~lLrGNHE~~ 188 (439)
|.++|||||++..+.. ........ +.+|+.||++++|... .+.+..|.. .+..++.+.||||..
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~-D~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~ 65 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEA-DAVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTP 65 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCC-CEEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCH
Confidence 5789999999988876 22222223 3499999999999763 333333322 345699999999975
No 43
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=98.45 E-value=4.5e-08 Score=81.46 Aligned_cols=86 Identities=23% Similarity=0.247 Sum_probs=56.6
Q ss_pred CCCCCCCcccccccccccccCC---CCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHH
Q 013652 14 LPSDESNPTISSTIASTEHSKG---NKPLSSAPVQIPISYP--EDGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDV 88 (439)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p--~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~l~~~~ 88 (439)
|.+-.++-.|++||+.++...+ ....++..+++.+..| +++.+|.+||.+|++.|+.+ +.||..+
T Consensus 5 c~k~ir~~~FekAI~~d~~~~s~~e~~d~~~i~Ve~sY~GP~l~~~~it~efv~~mie~FK~~----------K~Lhkky 74 (95)
T PF08321_consen 5 CEKLIRRIAFEKAIAVDEEKKSVSESIDLESIDVEDSYDGPRLEDEPITLEFVKAMIEWFKNQ----------KKLHKKY 74 (95)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHSTTTS-TTSTT---SS--SS--BTTB--HHHHHHHHHHHHCT--------------HHH
T ss_pred HHHHHHHHHHHHHhccCCcccCHHHhcCccceecCCCCCCCCCCCCCCCHHHHHHHHHHHHhC----------CCccHHH
Confidence 3344456678999997432222 2356666666666666 34679999999999999965 3689999
Q ss_pred HHHHHHHHHHHHhhCCCeEEe
Q 013652 89 FDTLVLTASKILHKEPNCVVI 109 (439)
Q Consensus 89 ~~~l~~~a~~il~~ep~~~~i 109 (439)
+..|+.+|.++|+++|++++|
T Consensus 75 v~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 75 VYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHHHHHHhCcCccCC
Confidence 999999999999999999986
No 44
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.41 E-value=2e-06 Score=72.55 Aligned_cols=67 Identities=31% Similarity=0.427 Sum_probs=49.0
Q ss_pred EEEccCCCCHHHHHHHH--HhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCc
Q 013652 119 VVVGDVHGQLHDVLFLL--RDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHE 186 (439)
Q Consensus 119 ~VvGDIHG~~~dL~~il--~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE 186 (439)
+++||+|+......... ....... .+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~-~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEK-PDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccC-CCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 37899999998887764 2222223 3449999999999998877766533333345678999999999
No 45
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.17 E-value=4.4e-06 Score=77.47 Aligned_cols=59 Identities=24% Similarity=0.343 Sum_probs=41.6
Q ss_pred cEEEEccCC-CCHH-----HHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccc
Q 013652 117 RVVVVGDVH-GQLH-----DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 117 ~i~VvGDIH-G~~~-----dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~ 188 (439)
+|.||||+| |+-. .+.++++. ...+ .++.+||+++ .+++.+|..++ ..++.++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d-~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQ-HVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCC-EEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 478999999 6533 34555543 2233 4999999987 77777775542 2699999999973
No 46
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.10 E-value=9.2e-06 Score=78.63 Aligned_cols=70 Identities=20% Similarity=0.236 Sum_probs=47.0
Q ss_pred CcEEEEccCCCCH------HHHHHHHHhcCCCCCCCceeeeccccCC--C-----CChHHHHHHHHHhhhhCCCcEEEec
Q 013652 116 SRVVVVGDVHGQL------HDVLFLLRDAGFPSKNCFFVFNGDYVDR--G-----AWGLETFLLLLAWKVFLPHRVYLLR 182 (439)
Q Consensus 116 ~~i~VvGDIHG~~------~dL~~il~~~g~~~~~~~~vfLGDyVDR--G-----~~s~evl~lL~~lk~~~p~~v~lLr 182 (439)
|++++++|+|... ..+.+.++... ... +.++++||++|. | +...+++.+|..++. .+..+++++
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~-~~~-d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~ 77 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEA-RQA-DALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMH 77 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhh-ccC-CEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEe
Confidence 6899999999542 24555554322 122 349999999985 2 334567777766653 334799999
Q ss_pred cCCccc
Q 013652 183 GNHESK 188 (439)
Q Consensus 183 GNHE~~ 188 (439)
||||..
T Consensus 78 GNHD~~ 83 (241)
T PRK05340 78 GNRDFL 83 (241)
T ss_pred CCCchh
Confidence 999974
No 47
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.09 E-value=0.00012 Score=67.56 Aligned_cols=65 Identities=20% Similarity=0.292 Sum_probs=45.5
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCcccc
Q 013652 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~ 189 (439)
|+|.|++|+||...+..+..+.......+. +|.+||++..... ..+.. ....+++.++||.|...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~-vih~GD~~~~~~~-----~~l~~---~~~~~i~~V~GN~D~~~ 66 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDA-VIHAGDSTSPFTL-----DALEG---GLAAKLIAVRGNCDGEV 66 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCE-EEECCCcCCccch-----HHhhc---ccccceEEEEccCCCcc
Confidence 689999999999976555555554444555 9999999975432 11111 02368999999999863
No 48
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.05 E-value=3.3e-05 Score=67.78 Aligned_cols=55 Identities=20% Similarity=0.237 Sum_probs=38.8
Q ss_pred EEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCc
Q 013652 120 VVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHE 186 (439)
Q Consensus 120 VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE 186 (439)
|+||+||..+.+.++.... ...+ .++++||+. .+++..+..++ ...++.++||||
T Consensus 2 viSDtH~~~~~~~~~~~~~--~~~d-~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D 56 (129)
T cd07403 2 VISDTESPALYSPEIKVRL--EGVD-LILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD 56 (129)
T ss_pred eeccccCccccchHHHhhC--CCCC-EEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc
Confidence 8999999987777766642 2334 499999974 34555555441 235899999999
No 49
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.03 E-value=1.7e-05 Score=78.32 Aligned_cols=72 Identities=15% Similarity=0.092 Sum_probs=50.7
Q ss_pred CCCcEEEEccCCCC----HHHHHHHHHhcCCCCCCCceeeeccccCCC--CChHHHHHHHHHhhhhCCCcEEEeccCCcc
Q 013652 114 QDSRVVVVGDVHGQ----LHDVLFLLRDAGFPSKNCFFVFNGDYVDRG--AWGLETFLLLLAWKVFLPHRVYLLRGNHES 187 (439)
Q Consensus 114 ~~~~i~VvGDIHG~----~~dL~~il~~~g~~~~~~~~vfLGDyVDRG--~~s~evl~lL~~lk~~~p~~v~lLrGNHE~ 187 (439)
+.++|++++|+|.. ...+.++++...-...+ .++++||++|++ ....++...|..|+.. ..++.+.||||.
T Consensus 48 ~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pD-lVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~ 124 (271)
T PRK11340 48 APFKILFLADLHYSRFVPLSLISDAIALGIEQKPD-LILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDR 124 (271)
T ss_pred CCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCC-EEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCc
Confidence 45799999999976 45567777665433344 499999999954 2334455666666543 359999999997
Q ss_pred c
Q 013652 188 K 188 (439)
Q Consensus 188 ~ 188 (439)
.
T Consensus 125 ~ 125 (271)
T PRK11340 125 P 125 (271)
T ss_pred c
Confidence 4
No 50
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=97.99 E-value=1.1e-05 Score=76.40 Aligned_cols=70 Identities=27% Similarity=0.303 Sum_probs=50.4
Q ss_pred CcEEEEccCCCCHH----HHHHHHHhcCCCCCCCceeeeccccCCCCChH-HHHHHHHHhhhhCCCcEEEeccCCccc
Q 013652 116 SRVVVVGDVHGQLH----DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL-ETFLLLLAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 116 ~~i~VvGDIHG~~~----dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~-evl~lL~~lk~~~p~~v~lLrGNHE~~ 188 (439)
+++.+++|+|+... .+.++++.+.....+ .+++.||++|.+.... ++..++..++ .+..++++.||||..
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d-~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~ 76 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPD-LVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYY 76 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCC-EEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCcccc
Confidence 68999999998743 566666655433334 4899999999988775 4445444432 345699999999985
No 51
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=97.94 E-value=7.1e-06 Score=74.42 Aligned_cols=67 Identities=27% Similarity=0.140 Sum_probs=46.2
Q ss_pred EEEEccCCCCHHHHHHHHH-hcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccc
Q 013652 118 VVVVGDVHGQLHDVLFLLR-DAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 118 i~VvGDIHG~~~dL~~il~-~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~ 188 (439)
+.+++|||+....+...+. ....... +.++++||+++++.....+. ++.. ...+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~-d~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDA-DILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCC-CEEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 4689999999877666542 2222333 44999999999987765544 2222 23456799999999986
No 52
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=97.92 E-value=0.00079 Score=64.08 Aligned_cols=69 Identities=20% Similarity=0.175 Sum_probs=40.6
Q ss_pred cEEEEccCCCCH----HHH----HHHHHhcCCCCCCCceeeeccccCCCCChH--HHHH-HHHHhhhhCCCcEEEeccCC
Q 013652 117 RVVVVGDVHGQL----HDV----LFLLRDAGFPSKNCFFVFNGDYVDRGAWGL--ETFL-LLLAWKVFLPHRVYLLRGNH 185 (439)
Q Consensus 117 ~i~VvGDIHG~~----~dL----~~il~~~g~~~~~~~~vfLGDyVDRG~~s~--evl~-lL~~lk~~~p~~v~lLrGNH 185 (439)
+++++||+|-.. ..+ ..+++.......+ .+|++||++|.|.... +.+. .+..|. ..+-.++.++|||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d-~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GNH 79 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIA-FVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGNH 79 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCC-EEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCCC
Confidence 689999999522 223 2233333222233 4899999999998433 2222 222222 1234589999999
Q ss_pred cc
Q 013652 186 ES 187 (439)
Q Consensus 186 E~ 187 (439)
|.
T Consensus 80 D~ 81 (214)
T cd07399 80 DL 81 (214)
T ss_pred cc
Confidence 94
No 53
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=97.88 E-value=0.00011 Score=64.85 Aligned_cols=68 Identities=25% Similarity=0.262 Sum_probs=39.7
Q ss_pred EEEEccCCCCHH----------HHHHHHHhcCCCCCCCceeeeccccCCCCCh-H-HHHHHHHHhhhhCCCcEEEeccCC
Q 013652 118 VVVVGDVHGQLH----------DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-L-ETFLLLLAWKVFLPHRVYLLRGNH 185 (439)
Q Consensus 118 i~VvGDIHG~~~----------dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s-~-evl~lL~~lk~~~p~~v~lLrGNH 185 (439)
|+.++|+|=... .|.++++.......+. ++++||+++.|... . +...++..+.... ..+++++|||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~-vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNH 78 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDL-VVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNH 78 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCE-EEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCC
Confidence 467899992111 1122344443333444 99999999998752 2 2233333332211 3799999999
Q ss_pred cc
Q 013652 186 ES 187 (439)
Q Consensus 186 E~ 187 (439)
|.
T Consensus 79 D~ 80 (144)
T cd07400 79 DV 80 (144)
T ss_pred eE
Confidence 97
No 54
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.75 E-value=6.3e-05 Score=69.02 Aligned_cols=55 Identities=22% Similarity=0.057 Sum_probs=31.6
Q ss_pred HHHHHhcCCCCCCCceeeeccccCCCCChH--HHHHH-HHHhhhhCCCcEEEeccCCccc
Q 013652 132 LFLLRDAGFPSKNCFFVFNGDYVDRGAWGL--ETFLL-LLAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 132 ~~il~~~g~~~~~~~~vfLGDyVDRG~~s~--evl~l-L~~lk~~~p~~v~lLrGNHE~~ 188 (439)
.++.+.+.....+. +|++||+++...... +.... +.. .....-.+++++||||..
T Consensus 31 ~~l~~~~~~~~~d~-lii~GDl~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 31 ERLDRLIEEYGPER-LIILGDLKHSFGGLSRQEFEEVAFLR-LLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHHhcCCCE-EEEeCcccccccccCHHHHHHHHHHH-hccCCCeEEEEcccCccc
Confidence 34444333223344 999999998655332 22221 111 123445899999999985
No 55
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.67 E-value=8e-05 Score=71.88 Aligned_cols=68 Identities=18% Similarity=0.126 Sum_probs=47.4
Q ss_pred cEEEEccCCCCH------HHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccc
Q 013652 117 RVVVVGDVHGQL------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 117 ~i~VvGDIHG~~------~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~ 188 (439)
+|.+++|+|+.+ ..|.++++.+.-...+ .+|+.||++++...+.+++..+..+ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d-~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKID-HLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCC-EEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 588999999653 2245566655433344 4999999999876666666555442 345699999999974
No 56
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.64 E-value=0.00014 Score=69.91 Aligned_cols=68 Identities=15% Similarity=0.101 Sum_probs=42.3
Q ss_pred EEEEccCCCCH------HHHHHHHHhcCCCCCCCceeeeccccCCC--C---C--hHHHHHHHHHhhhhCCCcEEEeccC
Q 013652 118 VVVVGDVHGQL------HDVLFLLRDAGFPSKNCFFVFNGDYVDRG--A---W--GLETFLLLLAWKVFLPHRVYLLRGN 184 (439)
Q Consensus 118 i~VvGDIHG~~------~dL~~il~~~g~~~~~~~~vfLGDyVDRG--~---~--s~evl~lL~~lk~~~p~~v~lLrGN 184 (439)
+++++|+|... ..+.+.+..... .. +.++++||++|.. . . ..++...|..|+. .+..++++.||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~-d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GN 77 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KA-DALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGN 77 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cC-CEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCC
Confidence 36899999542 234444443321 23 3499999999952 1 1 1345555655543 24579999999
Q ss_pred Cccc
Q 013652 185 HESK 188 (439)
Q Consensus 185 HE~~ 188 (439)
||..
T Consensus 78 HD~~ 81 (231)
T TIGR01854 78 RDFL 81 (231)
T ss_pred Cchh
Confidence 9974
No 57
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.62 E-value=0.00012 Score=72.11 Aligned_cols=69 Identities=20% Similarity=0.271 Sum_probs=43.7
Q ss_pred EEEEccCCCCHHHHHHHHHhcC---CCCCCCceeeeccccCCCCCh-HHHH-------------HHHHHhhhhCCCcEEE
Q 013652 118 VVVVGDVHGQLHDVLFLLRDAG---FPSKNCFFVFNGDYVDRGAWG-LETF-------------LLLLAWKVFLPHRVYL 180 (439)
Q Consensus 118 i~VvGDIHG~~~dL~~il~~~g---~~~~~~~~vfLGDyVDRG~~s-~evl-------------~lL~~lk~~~p~~v~l 180 (439)
|+|+||+||+++.+...++... .... +.+|++||+-..+..+ .+.+ .++-. ....|--+++
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~-D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g-~~~~p~~t~f 78 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKV-DLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSG-EKKAPILTIF 78 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCC-cEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcC-CccCCeeEEE
Confidence 6899999999988876544322 2233 4499999996544332 3222 11111 2235666899
Q ss_pred eccCCccc
Q 013652 181 LRGNHESK 188 (439)
Q Consensus 181 LrGNHE~~ 188 (439)
+-||||..
T Consensus 79 i~GNHE~~ 86 (262)
T cd00844 79 IGGNHEAS 86 (262)
T ss_pred ECCCCCCH
Confidence 99999974
No 58
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.55 E-value=0.0002 Score=70.29 Aligned_cols=73 Identities=22% Similarity=0.165 Sum_probs=47.6
Q ss_pred cEEEEccCC-CC------------HHHHHHHHHhcCCCCCCCceeeeccccCCCCC-hHHHHHHHHHhhhhCCCcEEEec
Q 013652 117 RVVVVGDVH-GQ------------LHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAW-GLETFLLLLAWKVFLPHRVYLLR 182 (439)
Q Consensus 117 ~i~VvGDIH-G~------------~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~-s~evl~lL~~lk~~~p~~v~lLr 182 (439)
++.+++|+| +. ...|.++++.+.....+. +|++||+++.|.. +.+-+..+.++-...+-.++.+.
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~-vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~ 80 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDF-VVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVL 80 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCE-EEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEec
Confidence 789999999 22 355666776664333444 9999999998873 22333333332222335799999
Q ss_pred cCCccccc
Q 013652 183 GNHESKYC 190 (439)
Q Consensus 183 GNHE~~~~ 190 (439)
||||....
T Consensus 81 GNHD~~~~ 88 (267)
T cd07396 81 GNHDLYNP 88 (267)
T ss_pred Cccccccc
Confidence 99998643
No 59
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.50 E-value=0.00019 Score=73.16 Aligned_cols=72 Identities=21% Similarity=0.264 Sum_probs=47.1
Q ss_pred CcEEEEccCC-C-----------CHHHHHHHHHhcCCCCCCCceeeeccccCCC-CChHHHHHHHHH--hhh--hCCCcE
Q 013652 116 SRVVVVGDVH-G-----------QLHDVLFLLRDAGFPSKNCFFVFNGDYVDRG-AWGLETFLLLLA--WKV--FLPHRV 178 (439)
Q Consensus 116 ~~i~VvGDIH-G-----------~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG-~~s~evl~lL~~--lk~--~~p~~v 178 (439)
|+++.++|+| | +...|.++++.+.-...+ .+|+.||++|+. +.+.+++.++.. ++. ..+-.+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD-~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v 79 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGIT-TWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITL 79 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCC-EEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeE
Confidence 6899999999 4 234455555555433334 499999999985 445555444432 111 234579
Q ss_pred EEeccCCccc
Q 013652 179 YLLRGNHESK 188 (439)
Q Consensus 179 ~lLrGNHE~~ 188 (439)
+++.||||..
T Consensus 80 ~~I~GNHD~~ 89 (340)
T PHA02546 80 HVLVGNHDMY 89 (340)
T ss_pred EEEccCCCcc
Confidence 9999999984
No 60
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.48 E-value=0.00028 Score=64.47 Aligned_cols=41 Identities=32% Similarity=0.344 Sum_probs=30.1
Q ss_pred CceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccc
Q 013652 145 CFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYC 190 (439)
Q Consensus 145 ~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~ 190 (439)
+.+|++||++++|..+.. +.++..+ +..+++++||||....
T Consensus 44 d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 44 DTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLIKGNHDSSLE 84 (168)
T ss_pred CEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEEeCCCCchhh
Confidence 459999999999986644 4444332 3569999999997643
No 61
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.46 E-value=0.016 Score=55.35 Aligned_cols=179 Identities=21% Similarity=0.211 Sum_probs=100.8
Q ss_pred CCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeecccc--CCCCChHHHHH-HHHHhhhhCCCcEEEeccCCcccccc
Q 013652 115 DSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYV--DRGAWGLETFL-LLLAWKVFLPHRVYLLRGNHESKYCT 191 (439)
Q Consensus 115 ~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyV--DRG~~s~evl~-lL~~lk~~~p~~v~lLrGNHE~~~~~ 191 (439)
.|++..+.|+||.++.+.+++..+.-...+. +|+.||+. +.|+.-.-.-. .+..++ ..--.++.+.||.|...+-
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~-lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~ 80 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADL-LVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVI 80 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCE-EEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHH
Confidence 5799999999999999999998877554555 89999999 87764322221 133333 2346899999998886431
Q ss_pred ccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeecCcEEeeccCCCCcccCCCCCCcCCCCCCccccCCCCCCCCCC
Q 013652 192 SVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIGKHVFTAHGGLFRSVSHAPSKKPKGKKKNNVVFNPETNPLSLG 271 (439)
Q Consensus 192 ~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~~~i~~vHGGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (439)
.....++. .+. +-...+++.-||--||..+..--++ .--
T Consensus 81 -------~~l~~~~~---~v~----------~~v~~i~~~~~~G~Ggsn~tp~nt~---------------------~e~ 119 (226)
T COG2129 81 -------DVLKNAGV---NVH----------GRVVEIGGYGFVGFGGSNPTPFNTP---------------------REF 119 (226)
T ss_pred -------HHHHhccc---ccc----------cceEEecCcEEEEecccCCCCCCCc---------------------ccc
Confidence 11111211 111 1123345556766677765431111 112
Q ss_pred CHHHHHHhhhccCCCCCCCCCCCCCCCCccccCCCCccCCCCCcCCCCCceeeChhhHHHHHHHcCCeEEEEecc
Q 013652 272 SFHELAKARRSVLDPPWNPQLSSNLIPGDLLWSDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHE 346 (439)
Q Consensus 272 sl~~i~~i~R~~~~~~~~~~~~~~~l~~dlLWsDP~~~~g~~~n~~Rg~g~~fG~~~~~~FL~~~~l~~IIRgHe 346 (439)
+-++|....+........ . .. ++-.+.-+....-.. .-| ...-|..++.++.+..+-.+.|+||-
T Consensus 120 ~E~~I~s~l~~~v~~~~~---~----~~-Il~~HaPP~gt~~d~-~~g-~~hvGS~~vr~~ieefqP~l~i~GHI 184 (226)
T COG2129 120 SEDEIYSKLKSLVKKADN---P----VN-ILLTHAPPYGTLLDT-PSG-YVHVGSKAVRKLIEEFQPLLGLHGHI 184 (226)
T ss_pred CHHHHHHHHHHHHhcccC---c----ce-EEEecCCCCCccccC-CCC-ccccchHHHHHHHHHhCCceEEEeee
Confidence 345565544443321111 0 00 222221111111101 122 13458899999999999999999985
No 62
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.37 E-value=0.00036 Score=68.22 Aligned_cols=72 Identities=22% Similarity=0.222 Sum_probs=47.2
Q ss_pred CcEEEEccCC-CC-----------HHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHH----HHHHHhhhhCCCcEE
Q 013652 116 SRVVVVGDVH-GQ-----------LHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETF----LLLLAWKVFLPHRVY 179 (439)
Q Consensus 116 ~~i~VvGDIH-G~-----------~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl----~lL~~lk~~~p~~v~ 179 (439)
|+++.++|+| |. ...|.++++.+.-...+. +|+.||++|+...+.+.. .++..|+...|-.++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~-lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~ 79 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDA-LLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIV 79 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCE-EEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEE
Confidence 6899999999 32 234455555443333344 999999999987665443 333344333335799
Q ss_pred EeccCCccc
Q 013652 180 LLRGNHESK 188 (439)
Q Consensus 180 lLrGNHE~~ 188 (439)
++.||||..
T Consensus 80 ~i~GNHD~~ 88 (253)
T TIGR00619 80 VISGNHDSA 88 (253)
T ss_pred EEccCCCCh
Confidence 999999985
No 63
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.36 E-value=0.00055 Score=67.52 Aligned_cols=73 Identities=18% Similarity=0.176 Sum_probs=47.6
Q ss_pred CCCcEEEEccCC-C-----------CHHHHHHHHHhcC-CCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEE
Q 013652 114 QDSRVVVVGDVH-G-----------QLHDVLFLLRDAG-FPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYL 180 (439)
Q Consensus 114 ~~~~i~VvGDIH-G-----------~~~dL~~il~~~g-~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~l 180 (439)
..++++.++|+| . ....|.++++.+. ....-+.+|+.||+++.|. .+-+..+...-...+..+++
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~ 90 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVW 90 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEE
Confidence 457899999999 1 1456777776653 2222244999999999874 23333333222233557999
Q ss_pred eccCCccc
Q 013652 181 LRGNHESK 188 (439)
Q Consensus 181 LrGNHE~~ 188 (439)
+.||||..
T Consensus 91 v~GNHD~~ 98 (275)
T PRK11148 91 LPGNHDFQ 98 (275)
T ss_pred eCCCCCCh
Confidence 99999973
No 64
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.32 E-value=0.0004 Score=65.35 Aligned_cols=23 Identities=9% Similarity=0.140 Sum_probs=18.5
Q ss_pred ChhhHHHHHHHcCCeEEEEeccC
Q 013652 325 GPDSTEEFLKKFSLKLIIRSHEG 347 (439)
Q Consensus 325 G~~~~~~FL~~~~l~~IIRgHe~ 347 (439)
.+..+.+.++..+.+.+|.||.-
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H 199 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTH 199 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCC
Confidence 34456777888999999999984
No 65
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.30 E-value=0.00066 Score=64.87 Aligned_cols=70 Identities=24% Similarity=0.362 Sum_probs=44.2
Q ss_pred cEEEEccCCCC------------HHHHHHHHHhcCCC-CCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEecc
Q 013652 117 RVVVVGDVHGQ------------LHDVLFLLRDAGFP-SKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRG 183 (439)
Q Consensus 117 ~i~VvGDIHG~------------~~dL~~il~~~g~~-~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrG 183 (439)
|+.+++|+|=. ...|.++++.+.-. +.-+.+|++||+++.|... ....+.......+-.++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPE--SYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHH--HHHHHHHHHhhcCCCEEEeCC
Confidence 58899999933 34567777655432 2223499999999987532 222222221122456999999
Q ss_pred CCccc
Q 013652 184 NHESK 188 (439)
Q Consensus 184 NHE~~ 188 (439)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 66
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.25 E-value=0.00063 Score=71.12 Aligned_cols=71 Identities=23% Similarity=0.339 Sum_probs=45.0
Q ss_pred CcEEEEccCC-CC-H------HH----HHHHHHhcCCCCCCCceeeeccccCCCCChHHHH----HHHHHhhhhCCCcEE
Q 013652 116 SRVVVVGDVH-GQ-L------HD----VLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETF----LLLLAWKVFLPHRVY 179 (439)
Q Consensus 116 ~~i~VvGDIH-G~-~------~d----L~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl----~lL~~lk~~~p~~v~ 179 (439)
|+++.++|+| |. + .+ |.++++.+.-...+. +|+.||++|++..+.+.. .++..|+. .+-.++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~-viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~ 78 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDA-IIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLV 78 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCE-EEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEE
Confidence 5899999999 42 1 11 233444433333444 999999999987654432 23333432 234699
Q ss_pred EeccCCccc
Q 013652 180 LLRGNHESK 188 (439)
Q Consensus 180 lLrGNHE~~ 188 (439)
++.||||..
T Consensus 79 ~I~GNHD~~ 87 (407)
T PRK10966 79 VLAGNHDSV 87 (407)
T ss_pred EEcCCCCCh
Confidence 999999985
No 67
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.20 E-value=0.0014 Score=70.29 Aligned_cols=115 Identities=18% Similarity=0.235 Sum_probs=60.2
Q ss_pred CCcEEEEccCC-CCH----HHHHHHHHhcC-CC-------CCCCceeeeccccCC-CCCh---------------HHHHH
Q 013652 115 DSRVVVVGDVH-GQL----HDVLFLLRDAG-FP-------SKNCFFVFNGDYVDR-GAWG---------------LETFL 165 (439)
Q Consensus 115 ~~~i~VvGDIH-G~~----~dL~~il~~~g-~~-------~~~~~~vfLGDyVDR-G~~s---------------~evl~ 165 (439)
..++++++|+| |.. ..+..+++... .. ..-..+|++||++|. |.++ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 46799999999 653 22344444322 21 112359999999994 3221 13444
Q ss_pred HHHHhhhhCCCcEEEeccCCcccccccc-ccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeec-CcEEeeccCC
Q 013652 166 LLLAWKVFLPHRVYLLRGNHESKYCTSV-YGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIG-KHVFTAHGGL 239 (439)
Q Consensus 166 lL~~lk~~~p~~v~lLrGNHE~~~~~~~-ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~-~~i~~vHGGi 239 (439)
+|..+. ..-.|++++||||....... ..+...+...+.. .-..++.. |....++ .+++++||-.
T Consensus 323 ~L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~-------~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPE-------HNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHhhh--cCCeEEEecCCCcchhhccCCCCccHHHHHhcCc-------CCeEEecC-CeEEEECCEEEEEECCCC
Confidence 444442 23469999999997543221 1222222111110 01233333 5444444 4788889875
No 68
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.19 E-value=0.00072 Score=63.54 Aligned_cols=73 Identities=23% Similarity=0.293 Sum_probs=47.2
Q ss_pred cEEEEccCC-CCH--------------HHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHh-hhh--CCCcE
Q 013652 117 RVVVVGDVH-GQL--------------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAW-KVF--LPHRV 178 (439)
Q Consensus 117 ~i~VvGDIH-G~~--------------~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~l-k~~--~p~~v 178 (439)
+|+.++|+| |.. ..|.++++.+.....+ .+|+.||++|....+.+.+..+... +.. ..-.+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVD-FVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCC-EEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCE
Confidence 578999999 322 2355666555433344 4999999999887655544433322 211 14579
Q ss_pred EEeccCCccccc
Q 013652 179 YLLRGNHESKYC 190 (439)
Q Consensus 179 ~lLrGNHE~~~~ 190 (439)
+++.||||....
T Consensus 80 ~~~~GNHD~~~~ 91 (223)
T cd00840 80 FIIAGNHDSPSR 91 (223)
T ss_pred EEecCCCCCccc
Confidence 999999998654
No 69
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.17 E-value=0.032 Score=54.76 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=21.2
Q ss_pred eChhhHHHHHHHcCCeEEEEecc
Q 013652 324 WGPDSTEEFLKKFSLKLIIRSHE 346 (439)
Q Consensus 324 fG~~~~~~FL~~~~l~~IIRgHe 346 (439)
-.+++++..|+..+-.+|.-||.
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhd 225 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDD 225 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCC
Confidence 47888999999999999999998
No 70
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.07 E-value=0.0016 Score=68.03 Aligned_cols=75 Identities=17% Similarity=0.216 Sum_probs=56.3
Q ss_pred CCCcEEEEccCCCC------------HHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhh--------
Q 013652 114 QDSRVVVVGDVHGQ------------LHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVF-------- 173 (439)
Q Consensus 114 ~~~~i~VvGDIHG~------------~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~-------- 173 (439)
..++|++++|+|-- +..|.++++.+.-...+- +|+.||+.|+..-|.+++..++.+-.+
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~-VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~ 80 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDM-ILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPC 80 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCE-EEECCccCCCCCCCHHHHHHHHHHHHHhhccCCcc
Confidence 45799999999932 557778887775444454 999999999999998888665543222
Q ss_pred ----------------------------CCCcEEEeccCCcccc
Q 013652 174 ----------------------------LPHRVYLLRGNHESKY 189 (439)
Q Consensus 174 ----------------------------~p~~v~lLrGNHE~~~ 189 (439)
..-.|+++-||||...
T Consensus 81 ~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 81 ELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred chhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1236999999999964
No 71
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.07 E-value=0.0018 Score=60.61 Aligned_cols=70 Identities=11% Similarity=0.075 Sum_probs=43.4
Q ss_pred CcEEEEccCCCCHH-----------HHHHHHH-hcCCCCCCCceeeeccccCCCCCh---HHHHHHHHHhhhhCCCcEEE
Q 013652 116 SRVVVVGDVHGQLH-----------DVLFLLR-DAGFPSKNCFFVFNGDYVDRGAWG---LETFLLLLAWKVFLPHRVYL 180 (439)
Q Consensus 116 ~~i~VvGDIHG~~~-----------dL~~il~-~~g~~~~~~~~vfLGDyVDRG~~s---~evl~lL~~lk~~~p~~v~l 180 (439)
.++.+++|+|-... ...+.++ .+.....+ .+|++||+++.+... .+.+..++.......-.+++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~ 81 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPD-LVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAA 81 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCC-EEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEE
Confidence 48999999995221 1122222 22222233 499999999977763 55555554433333456899
Q ss_pred eccCCc
Q 013652 181 LRGNHE 186 (439)
Q Consensus 181 LrGNHE 186 (439)
+.||||
T Consensus 82 ~~GNHD 87 (199)
T cd07383 82 TFGNHD 87 (199)
T ss_pred ECccCC
Confidence 999999
No 72
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.00 E-value=0.0018 Score=62.30 Aligned_cols=68 Identities=22% Similarity=0.193 Sum_probs=40.9
Q ss_pred cEEEEccCC-CCHHH----------------HHHHHHhcCCCCCCCceeeeccccCCCCCh---HHHHHHHHHhhhhCCC
Q 013652 117 RVVVVGDVH-GQLHD----------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAWG---LETFLLLLAWKVFLPH 176 (439)
Q Consensus 117 ~i~VvGDIH-G~~~d----------------L~~il~~~g~~~~~~~~vfLGDyVDRG~~s---~evl~lL~~lk~~~p~ 176 (439)
++.||+|+| |.-.. |.++.+.......+ .+|++||+.+....+ .++..++..+ ..
T Consensus 16 ~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d-~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 16 DKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIE-ALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred CeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCC-EEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 788999999 54332 22222222222233 499999999765543 2233333332 24
Q ss_pred cEEEeccCCcccc
Q 013652 177 RVYLLRGNHESKY 189 (439)
Q Consensus 177 ~v~lLrGNHE~~~ 189 (439)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999863
No 73
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=96.97 E-value=0.00096 Score=60.46 Aligned_cols=45 Identities=22% Similarity=0.409 Sum_probs=28.1
Q ss_pred CceeeeccccCCCCChH-HHH-HHHHHhhhh---C-CCcEEEeccCCcccc
Q 013652 145 CFFVFNGDYVDRGAWGL-ETF-LLLLAWKVF---L-PHRVYLLRGNHESKY 189 (439)
Q Consensus 145 ~~~vfLGDyVDRG~~s~-evl-~lL~~lk~~---~-p~~v~lLrGNHE~~~ 189 (439)
+.+|++||++|.+.... +.. ..+..++.. . ...++++.||||...
T Consensus 40 d~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 40 DVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 34999999999876532 222 222222222 1 346999999999853
No 74
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=96.83 E-value=0.0023 Score=61.62 Aligned_cols=69 Identities=20% Similarity=0.202 Sum_probs=39.6
Q ss_pred EEEEccCCCC---------H-----HHHHHHHHhcC-CCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEec
Q 013652 118 VVVVGDVHGQ---------L-----HDVLFLLRDAG-FPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLR 182 (439)
Q Consensus 118 i~VvGDIHG~---------~-----~dL~~il~~~g-~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLr 182 (439)
|++++|+|-. + +.+.++.+.+. .-+.-+.+|+.||+++++... +....+..++. .+..++++.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~-l~~~v~~V~ 78 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE-EAKLDLAWIDA-LPGTKVLLK 78 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH-HHHHHHHHHHh-CCCCeEEEe
Confidence 5789999955 1 22233333321 111234489999999887643 32222222332 234589999
Q ss_pred cCCccc
Q 013652 183 GNHESK 188 (439)
Q Consensus 183 GNHE~~ 188 (439)
||||..
T Consensus 79 GNHD~~ 84 (232)
T cd07393 79 GNHDYW 84 (232)
T ss_pred CCcccc
Confidence 999973
No 75
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=96.73 E-value=0.0047 Score=60.09 Aligned_cols=72 Identities=24% Similarity=0.316 Sum_probs=50.0
Q ss_pred CcEEEEccCCCC------HHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhh--hhCCCcEEEeccCCcc
Q 013652 116 SRVVVVGDVHGQ------LHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWK--VFLPHRVYLLRGNHES 187 (439)
Q Consensus 116 ~~i~VvGDIHG~------~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk--~~~p~~v~lLrGNHE~ 187 (439)
++|..|+|+|-- ...+.++++.......|- +|+.||+.++|. .+-...+..+- ...+..+++++||||.
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~-~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~ 77 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDL-LVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDA 77 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCE-EEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcC
Confidence 478999999966 345566667776555544 999999999963 23333332222 2567789999999999
Q ss_pred ccc
Q 013652 188 KYC 190 (439)
Q Consensus 188 ~~~ 190 (439)
+..
T Consensus 78 ~~~ 80 (301)
T COG1409 78 RVV 80 (301)
T ss_pred Cch
Confidence 754
No 76
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.59 E-value=0.0069 Score=59.27 Aligned_cols=70 Identities=19% Similarity=0.208 Sum_probs=40.2
Q ss_pred EEEEccCCCCHH------HH-HHHHHhcCCCCCCCceeeeccccCCCCCh--------H---HHHHHHHHhhhhCCCcEE
Q 013652 118 VVVVGDVHGQLH------DV-LFLLRDAGFPSKNCFFVFNGDYVDRGAWG--------L---ETFLLLLAWKVFLPHRVY 179 (439)
Q Consensus 118 i~VvGDIHG~~~------dL-~~il~~~g~~~~~~~~vfLGDyVDRG~~s--------~---evl~lL~~lk~~~p~~v~ 179 (439)
++.++|+|-... .. ..+++.+.....+ .+|++||++|++... . +.+..+..+....+..++
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd-~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPA-LVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWF 80 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCC-EEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEE
Confidence 567899994221 12 2234433322333 499999999986531 1 222222222222356799
Q ss_pred EeccCCccc
Q 013652 180 LLRGNHESK 188 (439)
Q Consensus 180 lLrGNHE~~ 188 (439)
.++||||..
T Consensus 81 ~v~GNHD~~ 89 (256)
T cd07401 81 DIRGNHDLF 89 (256)
T ss_pred EeCCCCCcC
Confidence 999999995
No 77
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=96.49 E-value=0.0079 Score=58.60 Aligned_cols=73 Identities=16% Similarity=0.045 Sum_probs=44.0
Q ss_pred CcEEEEccCCCCH----------------HHHHHHHHhcCC-CCCCCceeeeccccCCCCChH---HHHHHHHH-hhhh-
Q 013652 116 SRVVVVGDVHGQL----------------HDVLFLLRDAGF-PSKNCFFVFNGDYVDRGAWGL---ETFLLLLA-WKVF- 173 (439)
Q Consensus 116 ~~i~VvGDIHG~~----------------~dL~~il~~~g~-~~~~~~~vfLGDyVDRG~~s~---evl~lL~~-lk~~- 173 (439)
-++++++|+|-.. ..|.++++.+.. .+.-+.+|++||+++.|...- +....+.. ++..
T Consensus 5 ~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (262)
T cd07395 5 FYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLD 84 (262)
T ss_pred EEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhcc
Confidence 3788999999553 134555555432 223345999999999987642 11222211 2211
Q ss_pred CCCcEEEeccCCccc
Q 013652 174 LPHRVYLLRGNHESK 188 (439)
Q Consensus 174 ~p~~v~lLrGNHE~~ 188 (439)
.+-.++.+.||||..
T Consensus 85 ~~vp~~~i~GNHD~~ 99 (262)
T cd07395 85 PDIPLVCVCGNHDVG 99 (262)
T ss_pred CCCcEEEeCCCCCCC
Confidence 234699999999984
No 78
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.47 E-value=0.0045 Score=59.82 Aligned_cols=67 Identities=21% Similarity=0.299 Sum_probs=45.1
Q ss_pred cEEEEccCCCCH---------HHHHHHHHhcCCCCCCCceeeeccccCCCCChH-----HHHHHHHHhhhhCCCcEEEec
Q 013652 117 RVVVVGDVHGQL---------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL-----ETFLLLLAWKVFLPHRVYLLR 182 (439)
Q Consensus 117 ~i~VvGDIHG~~---------~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~-----evl~lL~~lk~~~p~~v~lLr 182 (439)
+|+.++|+||.+ ..+..+++...-...+..+|..||+++....+. .++..|.++ ... ++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d-~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYD-AVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCC-EEee
Confidence 689999999887 456666766554444555788999999888653 455544433 123 3456
Q ss_pred cCCccc
Q 013652 183 GNHESK 188 (439)
Q Consensus 183 GNHE~~ 188 (439)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 79
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.46 E-value=0.0059 Score=63.26 Aligned_cols=74 Identities=26% Similarity=0.256 Sum_probs=51.6
Q ss_pred CcEEEEccCC-C------------CHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCC---CcEE
Q 013652 116 SRVVVVGDVH-G------------QLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLP---HRVY 179 (439)
Q Consensus 116 ~~i~VvGDIH-G------------~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p---~~v~ 179 (439)
||+.-++|+| | ++.+|..+++.+.-...| .+|.-||+.|++.-|.+++..+...-...- -.|+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD-~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~ 79 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVD-FVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVV 79 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCC-EEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEE
Confidence 5889999999 4 123444555554433334 499999999999999888877655322221 3699
Q ss_pred EeccCCccccc
Q 013652 180 LLRGNHESKYC 190 (439)
Q Consensus 180 lLrGNHE~~~~ 190 (439)
+|.||||...-
T Consensus 80 ~I~GNHD~~~~ 90 (390)
T COG0420 80 VIAGNHDSPSR 90 (390)
T ss_pred EecCCCCchhc
Confidence 99999999753
No 80
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.35 E-value=0.0078 Score=54.41 Aligned_cols=67 Identities=21% Similarity=0.229 Sum_probs=47.5
Q ss_pred EEEccCCCCHHHHHHHHHhcC-CCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCc
Q 013652 119 VVVGDVHGQLHDVLFLLRDAG-FPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHE 186 (439)
Q Consensus 119 ~VvGDIHG~~~dL~~il~~~g-~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE 186 (439)
.|+||+||+++.+..-++... ....=+.+|++||+..-....-+.-.++ .=....|--.|++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~-~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYK-DGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHh-cCCccCCCCEEEECCCCC
Confidence 489999999999987776532 2222245899999997665553444443 335567788999999998
No 81
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.33 E-value=0.0082 Score=59.25 Aligned_cols=71 Identities=15% Similarity=0.145 Sum_probs=41.0
Q ss_pred CCcEEEEccCCC----CHHHHHHHHHhcCCCCCCCceeeeccccCCC-CCh---HH-HHHHHHHhhhhCCCcEEEeccCC
Q 013652 115 DSRVVVVGDVHG----QLHDVLFLLRDAGFPSKNCFFVFNGDYVDRG-AWG---LE-TFLLLLAWKVFLPHRVYLLRGNH 185 (439)
Q Consensus 115 ~~~i~VvGDIHG----~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG-~~s---~e-vl~lL~~lk~~~p~~v~lLrGNH 185 (439)
.-+++|+||.|. ....+.++.+. .... +.+|++||+++-+ ..+ -+ .+..+..+.. .-.++.++|||
T Consensus 4 ~~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~-d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNH 78 (294)
T cd00839 4 PFKFAVFGDMGQNTNNSTNTLDHLEKE--LGNY-DAILHVGDLAYADGYNNGSRWDTFMRQIEPLAS--YVPYMVTPGNH 78 (294)
T ss_pred cEEEEEEEECCCCCCCcHHHHHHHHhc--cCCc-cEEEEcCchhhhcCCccchhHHHHHHHHHHHHh--cCCcEEcCccc
Confidence 348999999995 33333334333 1222 3489999999544 321 12 2222222222 23589999999
Q ss_pred ccccc
Q 013652 186 ESKYC 190 (439)
Q Consensus 186 E~~~~ 190 (439)
|....
T Consensus 79 D~~~~ 83 (294)
T cd00839 79 EADYN 83 (294)
T ss_pred ccccC
Confidence 98643
No 82
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.25 E-value=0.011 Score=59.01 Aligned_cols=73 Identities=29% Similarity=0.389 Sum_probs=48.0
Q ss_pred CCCcEEEEccCCCCHHH--HHHHHHhcCCCCCCCceeeeccccCC-CCChHHHH-HHHHHhhhhCCCcEEEeccCCcccc
Q 013652 114 QDSRVVVVGDVHGQLHD--VLFLLRDAGFPSKNCFFVFNGDYVDR-GAWGLETF-LLLLAWKVFLPHRVYLLRGNHESKY 189 (439)
Q Consensus 114 ~~~~i~VvGDIHG~~~d--L~~il~~~g~~~~~~~~vfLGDyVDR-G~~s~evl-~lL~~lk~~~p~~v~lLrGNHE~~~ 189 (439)
.+.+|+-++|+|-.... ..+.+........ +.+++.|||+|+ .+.+.+.+ ..|..| ..|-.+|++-||||...
T Consensus 43 ~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~-DlivltGD~~~~~~~~~~~~~~~~L~~L--~~~~gv~av~GNHd~~~ 119 (284)
T COG1408 43 QGLKIVQLSDLHSLPFREEKLALLIAIANELP-DLIVLTGDYVDGDRPPGVAALALFLAKL--KAPLGVFAVLGNHDYGV 119 (284)
T ss_pred CCeEEEEeehhhhchhhHHHHHHHHHHHhcCC-CEEEEEeeeecCCCCCCHHHHHHHHHhh--hccCCEEEEeccccccc
Confidence 35579999999977655 2222222222222 559999999996 55555544 445544 45668999999998764
No 83
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.23 E-value=0.015 Score=56.06 Aligned_cols=100 Identities=26% Similarity=0.340 Sum_probs=57.5
Q ss_pred EEccCCCC------HHHHHHHHHhcCCCCCCCceeeeccccCC--CCC-----hHHHHHHHHHhhhhCCCcEEEeccCCc
Q 013652 120 VVGDVHGQ------LHDVLFLLRDAGFPSKNCFFVFNGDYVDR--GAW-----GLETFLLLLAWKVFLPHRVYLLRGNHE 186 (439)
Q Consensus 120 VvGDIHG~------~~dL~~il~~~g~~~~~~~~vfLGDyVDR--G~~-----s~evl~lL~~lk~~~p~~v~lLrGNHE 186 (439)
.|+|+|=. .+.|++.|+.... ..+.++++||++|- |.. --+|...|..+. ....++|.+.||||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~--~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i~GN~D 78 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAA--QADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYIHGNHD 78 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccc--cCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEecCchH
Confidence 68999933 3344555554432 33348999999962 332 245555555432 45678999999999
Q ss_pred cccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeee---cCcEEeeccCCCC
Q 013652 187 SKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI---GKHVFTAHGGLFR 241 (439)
Q Consensus 187 ~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i---~~~i~~vHGGi~~ 241 (439)
.. +. .+++.. .--+.-+|-..++ +.+++++||....
T Consensus 79 fl-l~----------~~f~~~--------~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~ 117 (237)
T COG2908 79 FL-LG----------KRFAQE--------AGGMTLLPDPIVLDLYGKRILLAHGDTFC 117 (237)
T ss_pred HH-HH----------HHHHhh--------cCceEEcCcceeeeecCcEEEEEeCCccc
Confidence 53 21 111110 1112234444333 6789999998764
No 84
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.09 E-value=0.017 Score=55.86 Aligned_cols=69 Identities=22% Similarity=0.267 Sum_probs=38.5
Q ss_pred EEEccCC--CCH---HHHHHHHHhc-CCCC---CCCceeeeccccCCCCC------------h---H-HHHHHHHHhhhh
Q 013652 119 VVVGDVH--GQL---HDVLFLLRDA-GFPS---KNCFFVFNGDYVDRGAW------------G---L-ETFLLLLAWKVF 173 (439)
Q Consensus 119 ~VvGDIH--G~~---~dL~~il~~~-g~~~---~~~~~vfLGDyVDRG~~------------s---~-evl~lL~~lk~~ 173 (439)
++++|+| +.. ..+..+++.. +... .-+.+|++||++|+... . . ++..+|..|.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 5899999 332 2223333332 2211 22459999999997320 0 1 1222333332
Q ss_pred CCCcEEEeccCCcccc
Q 013652 174 LPHRVYLLRGNHESKY 189 (439)
Q Consensus 174 ~p~~v~lLrGNHE~~~ 189 (439)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2357999999999853
No 85
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=96.02 E-value=0.02 Score=59.47 Aligned_cols=84 Identities=23% Similarity=0.403 Sum_probs=56.4
Q ss_pred CCCcEEEEccCC--C---------------CHHHHHHHHHhcCCCCCCCceeeeccccCCCCCh--HHHHHHHHHhhhhC
Q 013652 114 QDSRVVVVGDVH--G---------------QLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG--LETFLLLLAWKVFL 174 (439)
Q Consensus 114 ~~~~i~VvGDIH--G---------------~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s--~evl~lL~~lk~~~ 174 (439)
...++..|+|-| | +=.-|.+.++...+.-..+..+||||++|-|.+. -|--.....+|..+
T Consensus 47 n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf 126 (410)
T KOG3662|consen 47 NSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIF 126 (410)
T ss_pred CceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhh
Confidence 345888999976 3 1123455666665555555589999999999875 34445555666666
Q ss_pred CC----cEEEeccCCccccccccccchHHHHHHh
Q 013652 175 PH----RVYLLRGNHESKYCTSVYGFEKEVMAKY 204 (439)
Q Consensus 175 p~----~v~lLrGNHE~~~~~~~ygf~~e~~~~~ 204 (439)
+. .+..+.||||- ||..|.....
T Consensus 127 ~~k~~~~~~~i~GNhDI-------Gf~~~~~~~~ 153 (410)
T KOG3662|consen 127 GRKGNIKVIYIAGNHDI-------GFGNELIPEW 153 (410)
T ss_pred CCCCCCeeEEeCCcccc-------ccccccchhH
Confidence 54 68999999998 6665554433
No 86
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=95.99 E-value=0.011 Score=55.73 Aligned_cols=43 Identities=19% Similarity=0.407 Sum_probs=31.7
Q ss_pred ceeeeccccCCCCCh--HHHHHHHHHhhhhCC----CcEEEeccCCccc
Q 013652 146 FFVFNGDYVDRGAWG--LETFLLLLAWKVFLP----HRVYLLRGNHESK 188 (439)
Q Consensus 146 ~~vfLGDyVDRG~~s--~evl~lL~~lk~~~p----~~v~lLrGNHE~~ 188 (439)
.+||+||++|.|+.+ .|....+..++..+. -.++.+.||||.-
T Consensus 45 ~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 45 IVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred EEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 399999999999964 346666655544332 4689999999974
No 87
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=95.95 E-value=0.013 Score=53.88 Aligned_cols=45 Identities=27% Similarity=0.317 Sum_probs=28.7
Q ss_pred CceeeeccccCCCCChH--H---HHHHHHHhhhhC-----CCcEEEeccCCcccc
Q 013652 145 CFFVFNGDYVDRGAWGL--E---TFLLLLAWKVFL-----PHRVYLLRGNHESKY 189 (439)
Q Consensus 145 ~~~vfLGDyVDRG~~s~--e---vl~lL~~lk~~~-----p~~v~lLrGNHE~~~ 189 (439)
+.+||+||++|.|.... + .+..+..+.... ...++++.||||...
T Consensus 47 d~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 47 DVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred CEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 34999999999887532 2 232222221111 346999999999964
No 88
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=95.86 E-value=0.041 Score=49.79 Aligned_cols=70 Identities=19% Similarity=0.107 Sum_probs=41.1
Q ss_pred cEEEEccCCC------------CHHHHHHH-HHhc-CCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEec
Q 013652 117 RVVVVGDVHG------------QLHDVLFL-LRDA-GFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLR 182 (439)
Q Consensus 117 ~i~VvGDIHG------------~~~dL~~i-l~~~-g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLr 182 (439)
.++.+||+|= +.+..... +... .....++.+.+|||+.-.-..--+...++-+ -++++++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~Iler----LnGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILER----LNGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHH----cCCcEEEee
Confidence 5889999982 22222222 2111 1122344599999998644433333333333 368999999
Q ss_pred cCCccccc
Q 013652 183 GNHESKYC 190 (439)
Q Consensus 183 GNHE~~~~ 190 (439)
||||..--
T Consensus 81 GNhDk~~~ 88 (186)
T COG4186 81 GNHDKCHP 88 (186)
T ss_pred CCCCCCcc
Confidence 99998643
No 89
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.66 E-value=0.021 Score=53.78 Aligned_cols=66 Identities=17% Similarity=0.047 Sum_probs=43.0
Q ss_pred cCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHH-HHHHHHhhhhC---------------------CCcEEE
Q 013652 123 DVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLET-FLLLLAWKVFL---------------------PHRVYL 180 (439)
Q Consensus 123 DIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~ev-l~lL~~lk~~~---------------------p~~v~l 180 (439)
|++|+=.=|.++++.+...-.-+.++||||++|.|--+-+- -.....++..+ .-.+++
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 55677666788887765544445599999999997544332 23343433322 135799
Q ss_pred eccCCccc
Q 013652 181 LRGNHESK 188 (439)
Q Consensus 181 LrGNHE~~ 188 (439)
|.||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999994
No 90
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.64 E-value=0.02 Score=55.32 Aligned_cols=77 Identities=22% Similarity=0.150 Sum_probs=44.7
Q ss_pred CcEEEEccCCCCHH----------------HHHHHHHhcCCCCCCCceeeeccccCCCCC-----hHHHHHHHHHhhhhC
Q 013652 116 SRVVVVGDVHGQLH----------------DVLFLLRDAGFPSKNCFFVFNGDYVDRGAW-----GLETFLLLLAWKVFL 174 (439)
Q Consensus 116 ~~i~VvGDIHG~~~----------------dL~~il~~~g~~~~~~~~vfLGDyVDRG~~-----s~evl~lL~~lk~~~ 174 (439)
.++.|+.|+|=-+. .+.+.+...=-....+.+|.|||+-.-.+. ..|+-.++-.++..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~- 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER- 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhccC-
Confidence 48999999994333 222233211111122349999999854333 24555555444322
Q ss_pred CCcEEEeccCCcccccccccc
Q 013652 175 PHRVYLLRGNHESKYCTSVYG 195 (439)
Q Consensus 175 p~~v~lLrGNHE~~~~~~~yg 195 (439)
.+++++||||...-.-.++
T Consensus 99 --evi~i~GNHD~~i~~~~~~ 117 (235)
T COG1407 99 --EVIIIRGNHDNGIEEILPG 117 (235)
T ss_pred --cEEEEeccCCCcccccccc
Confidence 5999999999975433333
No 91
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=94.94 E-value=0.033 Score=54.90 Aligned_cols=66 Identities=26% Similarity=0.312 Sum_probs=39.3
Q ss_pred cEEEEccCCCCH----------------HHHHHHHHhcCCCCCCCceeeeccccCCCCCh-----------HHHHHHHHH
Q 013652 117 RVVVVGDVHGQL----------------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----------LETFLLLLA 169 (439)
Q Consensus 117 ~i~VvGDIHG~~----------------~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s-----------~evl~lL~~ 169 (439)
+|+.++|+||++ ..|..+++...-...+..+|..||+++..+.+ ..++..+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 688999999996 33555666554333343233379999876522 224444444
Q ss_pred hhhhCCCcEEEeccCCcc
Q 013652 170 WKVFLPHRVYLLRGNHES 187 (439)
Q Consensus 170 lk~~~p~~v~lLrGNHE~ 187 (439)
+. . -++..||||.
T Consensus 82 ~g---~--d~~~lGNHe~ 94 (277)
T cd07410 82 LG---Y--DAGTLGNHEF 94 (277)
T ss_pred cC---C--CEEeecccCc
Confidence 32 1 2555699996
No 92
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=94.65 E-value=0.038 Score=53.06 Aligned_cols=73 Identities=16% Similarity=0.169 Sum_probs=43.3
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHH-------------------------HHHHHh
Q 013652 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETF-------------------------LLLLAW 170 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl-------------------------~lL~~l 170 (439)
.+|.+++|.||+++.|.++.+.+.-...|. +||+||++-....+-|-. .-++..
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~-~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDA-VVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SE-EEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCE-EEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 479999999999999999887664444455 999999996555544433 222222
Q ss_pred hhhCCCcEEEeccCCcccc
Q 013652 171 KVFLPHRVYLLRGNHESKY 189 (439)
Q Consensus 171 k~~~p~~v~lLrGNHE~~~ 189 (439)
.-..+-.+++++||||...
T Consensus 85 L~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 85 LGELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHCC-SEEEEE--TTS-SH
T ss_pred HHhcCCcEEEecCCCCchH
Confidence 2234567999999999963
No 93
>PLN02533 probable purple acid phosphatase
Probab=94.11 E-value=0.066 Score=56.44 Aligned_cols=70 Identities=19% Similarity=0.135 Sum_probs=39.0
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChH--HH-HHHHHHhhhhCCCcEEEeccCCcccc
Q 013652 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL--ET-FLLLLAWKVFLPHRVYLLRGNHESKY 189 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~--ev-l~lL~~lk~~~p~~v~lLrGNHE~~~ 189 (439)
-+++|+||+|-. ......++.+.....+ .+|++||+++-+...- +. ..++..+.... -++.+.||||...
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~~i~~~~pD-~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~--P~m~~~GNHE~~~ 212 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLEHVSKWDYD-VFILPGDLSYANFYQPLWDTFGRLVQPLASQR--PWMVTHGNHELEK 212 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHHHHHhcCCC-EEEEcCccccccchHHHHHHHHHHhhhHhhcC--ceEEeCccccccc
Confidence 479999999632 1122233333222333 4899999997554321 11 22222222222 4889999999864
No 94
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=94.00 E-value=0.068 Score=53.23 Aligned_cols=67 Identities=28% Similarity=0.395 Sum_probs=43.9
Q ss_pred cEEEEccCCCCHHH--------------HHHHHHhcCCCCCCCceeeeccccCCCCC-h-----HHHHHHHHHhhhhCCC
Q 013652 117 RVVVVGDVHGQLHD--------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAW-G-----LETFLLLLAWKVFLPH 176 (439)
Q Consensus 117 ~i~VvGDIHG~~~d--------------L~~il~~~g~~~~~~~~vfLGDyVDRG~~-s-----~evl~lL~~lk~~~p~ 176 (439)
+|+.+.|+||++.. |..+++.......+..+|..||++...+. + ..++..+.++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 68889999998543 55666665544445568889999987654 2 245555555431
Q ss_pred cEEEeccCCccc
Q 013652 177 RVYLLRGNHESK 188 (439)
Q Consensus 177 ~v~lLrGNHE~~ 188 (439)
. ++..||||.-
T Consensus 78 D-a~t~GNHefd 88 (288)
T cd07412 78 D-ASAVGNHEFD 88 (288)
T ss_pred e-eeeecccccc
Confidence 3 4555999963
No 95
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=93.36 E-value=0.15 Score=50.04 Aligned_cols=66 Identities=21% Similarity=0.234 Sum_probs=38.6
Q ss_pred cEEEEccCCCCHHH----------------------HHHHHHhcCCC-CCCCceeeeccccCCCCChH-----HHHHHHH
Q 013652 117 RVVVVGDVHGQLHD----------------------VLFLLRDAGFP-SKNCFFVFNGDYVDRGAWGL-----ETFLLLL 168 (439)
Q Consensus 117 ~i~VvGDIHG~~~d----------------------L~~il~~~g~~-~~~~~~vfLGDyVDRG~~s~-----evl~lL~ 168 (439)
.|+.+.|+||++.. +..+++..... ..+..++..||+++..+.+. .++..+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 46788899997533 34455554333 34443466999998876442 3444444
Q ss_pred HhhhhCCCcEEEeccCCccc
Q 013652 169 AWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 169 ~lk~~~p~~v~lLrGNHE~~ 188 (439)
.+ + --++. ||||..
T Consensus 82 ~~----g-~da~~-GNHefd 95 (264)
T cd07411 82 AL----G-VDAMV-GHWEFT 95 (264)
T ss_pred hh----C-CeEEe-cccccc
Confidence 33 2 23444 999963
No 96
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=93.25 E-value=0.15 Score=49.80 Aligned_cols=65 Identities=18% Similarity=0.228 Sum_probs=40.7
Q ss_pred cEEEEccCCCCH----------HHHHHHHHhcCCCCCCCceeeeccccCCCCCh-----HHHHHHHHHhhhhCCCcEEEe
Q 013652 117 RVVVVGDVHGQL----------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHRVYLL 181 (439)
Q Consensus 117 ~i~VvGDIHG~~----------~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~p~~v~lL 181 (439)
+|+-++|+||++ ..+..+++...-. .+..++..||+++..+.+ ..++..+-.+ .-.+ +.
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~-~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~ 75 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL-DNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VT 75 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhc-CCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Ec
Confidence 678899999985 3455566655433 345688899999876543 2333333332 1234 45
Q ss_pred ccCCcc
Q 013652 182 RGNHES 187 (439)
Q Consensus 182 rGNHE~ 187 (439)
.||||.
T Consensus 76 ~GNHef 81 (257)
T cd07408 76 PGNHEF 81 (257)
T ss_pred cccccc
Confidence 699996
No 97
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=93.14 E-value=2.8 Score=44.47 Aligned_cols=75 Identities=23% Similarity=0.411 Sum_probs=42.6
Q ss_pred CcEEEEccCC-CCHHHHHH----HHHhcCCCC----CCCceeeeccccCC-CCCh-----------HHHHHHHHHhhhhC
Q 013652 116 SRVVVVGDVH-GQLHDVLF----LLRDAGFPS----KNCFFVFNGDYVDR-GAWG-----------LETFLLLLAWKVFL 174 (439)
Q Consensus 116 ~~i~VvGDIH-G~~~dL~~----il~~~g~~~----~~~~~vfLGDyVDR-G~~s-----------~evl~lL~~lk~~~ 174 (439)
-.+.+++|+| |...-+.. +++.++.+. .-.-++..||.||. |-++ .|-...+..+.-+-
T Consensus 226 v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~v 305 (481)
T COG1311 226 VYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQV 305 (481)
T ss_pred eEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhC
Confidence 4689999999 45444433 334443332 11225668899994 3222 22233333333334
Q ss_pred CC--cEEEeccCCccccc
Q 013652 175 PH--RVYLLRGNHESKYC 190 (439)
Q Consensus 175 p~--~v~lLrGNHE~~~~ 190 (439)
|. .|++.+||||..-.
T Consensus 306 p~~I~v~i~PGnhDa~r~ 323 (481)
T COG1311 306 PEHIKVFIMPGNHDAVRQ 323 (481)
T ss_pred CCCceEEEecCCCCcccc
Confidence 54 57999999998654
No 98
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=92.79 E-value=0.22 Score=48.67 Aligned_cols=70 Identities=27% Similarity=0.280 Sum_probs=39.2
Q ss_pred cEEEEccCCCC--H--HHHHHHHH-hcCCCCCCCceeeecccc-CCCCChH------HHHHHHHHhhhhCCCcEEEeccC
Q 013652 117 RVVVVGDVHGQ--L--HDVLFLLR-DAGFPSKNCFFVFNGDYV-DRGAWGL------ETFLLLLAWKVFLPHRVYLLRGN 184 (439)
Q Consensus 117 ~i~VvGDIHG~--~--~dL~~il~-~~g~~~~~~~~vfLGDyV-DRG~~s~------evl~lL~~lk~~~p~~v~lLrGN 184 (439)
+++++||.=.. . ..+...+. .+..... +.+|++||+| +-|..+. +.+..++.. ....-.++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~-dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGP-DFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCC-CEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCC
Confidence 67899998653 1 23433333 3322223 4489999987 5554221 223323221 1123469999999
Q ss_pred Cccc
Q 013652 185 HESK 188 (439)
Q Consensus 185 HE~~ 188 (439)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9986
No 99
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=92.31 E-value=0.25 Score=50.31 Aligned_cols=72 Identities=22% Similarity=0.392 Sum_probs=44.5
Q ss_pred CcEEEEccCCCCHHHHHHH---HHhcCCCCCCCceeeeccccC-CCC---Ch---------HHHHHHHHHhhhhCCCcEE
Q 013652 116 SRVVVVGDVHGQLHDVLFL---LRDAGFPSKNCFFVFNGDYVD-RGA---WG---------LETFLLLLAWKVFLPHRVY 179 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~i---l~~~g~~~~~~~~vfLGDyVD-RG~---~s---------~evl~lL~~lk~~~p~~v~ 179 (439)
|||.|-|=.||+++.+-+- .++.|-..- +.+++.||+=- |-. ++ +..+.--+.-....|--.+
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkV-DLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTI 79 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKV-DLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTI 79 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCc-cEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEE
Confidence 6899999999999988744 444443343 45999999852 211 11 1111111222233455668
Q ss_pred EeccCCccc
Q 013652 180 LLRGNHESK 188 (439)
Q Consensus 180 lLrGNHE~~ 188 (439)
++-||||.+
T Consensus 80 FIGGNHEAs 88 (456)
T KOG2863|consen 80 FIGGNHEAS 88 (456)
T ss_pred EecCchHHH
Confidence 899999996
No 100
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=91.75 E-value=0.31 Score=48.18 Aligned_cols=68 Identities=21% Similarity=0.223 Sum_probs=50.0
Q ss_pred CcEEEEccCCCC--HHHHHHHHHhcCCCCCCCceeeeccccCCC-CChHHHHHHHHHhhhhCCCcEEEeccCCccc
Q 013652 116 SRVVVVGDVHGQ--LHDVLFLLRDAGFPSKNCFFVFNGDYVDRG-AWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 116 ~~i~VvGDIHG~--~~dL~~il~~~g~~~~~~~~vfLGDyVDRG-~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~ 188 (439)
|+|.++|||=|. ...|...|..+......+.+|.+||....| --+.++...|..+- -.++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~G----vDviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSG----VNYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcC----CCEEEc-cchhcc
Confidence 689999999999 566777776665444445577799999766 45688888887653 355555 999985
No 101
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=90.15 E-value=0.32 Score=52.87 Aligned_cols=42 Identities=26% Similarity=0.385 Sum_probs=36.9
Q ss_pred ceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccccc
Q 013652 146 FFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTS 192 (439)
Q Consensus 146 ~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~ 192 (439)
++-.+||+.||||.+--++..|+.. .+|-+--||||--.|..
T Consensus 187 hLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWMGA 228 (640)
T PF06874_consen 187 HLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWMGA 228 (640)
T ss_pred heeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHHHH
Confidence 4788999999999999999999865 58999999999988743
No 102
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=90.15 E-value=0.58 Score=46.37 Aligned_cols=67 Identities=19% Similarity=0.258 Sum_probs=39.6
Q ss_pred cEEEEccCCCCH---------------------HHHHHHHHhcCCCCCCCceeeeccccCCCCCh-----HHHHHHHHHh
Q 013652 117 RVVVVGDVHGQL---------------------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAW 170 (439)
Q Consensus 117 ~i~VvGDIHG~~---------------------~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~l 170 (439)
+|+-++|+||++ ..+..+++...-...+..++..||+++..+.+ ..++..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 578889999875 34445555554333444466689999876543 3333433333
Q ss_pred hhhCCCcEEEeccCCccc
Q 013652 171 KVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 171 k~~~p~~v~lLrGNHE~~ 188 (439)
. -.+. ..||||.-
T Consensus 82 g----~D~~-~lGNHefd 94 (281)
T cd07409 82 G----YDAM-TLGNHEFD 94 (281)
T ss_pred C----CCEE-Eecccccc
Confidence 2 2344 45999973
No 103
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=89.04 E-value=0.71 Score=45.09 Aligned_cols=66 Identities=21% Similarity=0.209 Sum_probs=42.6
Q ss_pred cEEEEccCC----------CCHHHHHHHHHhcCCCCCCCceeeeccccCCCCCh-----HHHHHHHHHhhhhCCCcEEEe
Q 013652 117 RVVVVGDVH----------GQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHRVYLL 181 (439)
Q Consensus 117 ~i~VvGDIH----------G~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~p~~v~lL 181 (439)
+|+-+.|+| |.+..+..++++..-...+..++..||+++..+.+ ..++..+..+. --+..
T Consensus 2 ~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~ 76 (257)
T cd07406 2 TILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLAC 76 (257)
T ss_pred eEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEe
Confidence 345556666 44667777777665444455688899999877532 45555555442 23567
Q ss_pred ccCCcc
Q 013652 182 RGNHES 187 (439)
Q Consensus 182 rGNHE~ 187 (439)
.||||.
T Consensus 77 ~GNHef 82 (257)
T cd07406 77 FGNHEF 82 (257)
T ss_pred eccccc
Confidence 899996
No 104
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=88.39 E-value=0.6 Score=55.36 Aligned_cols=67 Identities=19% Similarity=0.239 Sum_probs=42.1
Q ss_pred CcEEEEccCCCCH---HHHHHHHHhcCCCCCCCceeeeccccCCCCCh-----HHHHHHHHHhhhhCCCcEEEeccCCcc
Q 013652 116 SRVVVVGDVHGQL---HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHRVYLLRGNHES 187 (439)
Q Consensus 116 ~~i~VvGDIHG~~---~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~p~~v~lLrGNHE~ 187 (439)
.+|+.++|+||++ ..+..+++...-...+..++..||++++.+.+ ..++..+.++ +--++..||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~l-----g~d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEM-----GYDASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCc-----CCCEEEeccccc
Confidence 4789999999985 44444555443323344334489999987654 2445544443 233668999997
No 105
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=88.02 E-value=0.91 Score=42.27 Aligned_cols=43 Identities=23% Similarity=0.329 Sum_probs=31.0
Q ss_pred CCCceeeeccccC--CCCChHHHHHHHHHhhhhCCCcEEEeccCCcccc
Q 013652 143 KNCFFVFNGDYVD--RGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (439)
Q Consensus 143 ~~~~~vfLGDyVD--RG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~ 189 (439)
.++.++.-||+-- |=++..+=+.+|-+| |+.=+++|||||...
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw 87 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWW 87 (230)
T ss_pred hhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCcccc
Confidence 3444777899863 445566666766654 789999999999863
No 106
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=87.20 E-value=1.1 Score=44.40 Aligned_cols=63 Identities=27% Similarity=0.202 Sum_probs=36.6
Q ss_pred HHHHHHHHhcCCC-CCCCceeeeccccCCCCChH--H------HHHHHHHhhhhCC-CcEEEeccCCcccccc
Q 013652 129 HDVLFLLRDAGFP-SKNCFFVFNGDYVDRGAWGL--E------TFLLLLAWKVFLP-HRVYLLRGNHESKYCT 191 (439)
Q Consensus 129 ~dL~~il~~~g~~-~~~~~~vfLGDyVDRG~~s~--e------vl~lL~~lk~~~p-~~v~lLrGNHE~~~~~ 191 (439)
..+..+++.+... ..-+.+|+.||+++.+.... + .-.+...++..+| -.|+.+.||||..-.+
T Consensus 53 ~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~ 125 (296)
T cd00842 53 RLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVN 125 (296)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCccc
Confidence 3445555443222 22344999999999887531 1 1122223443444 3699999999987543
No 107
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=87.14 E-value=0.027 Score=57.76 Aligned_cols=93 Identities=3% Similarity=-0.248 Sum_probs=70.7
Q ss_pred CceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccccccccchHHHHHHhcCc-chHHHHHHhhhhcCCC
Q 013652 145 CFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDK-GKHAYRKCLGCFEGLP 223 (439)
Q Consensus 145 ~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~-~~~~~~~~~~~f~~LP 223 (439)
...|+++++++++.+.++.+.+-+..+..+-.+....++||+. .+++..++...-... ...+++..++-+...+
T Consensus 49 latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~-----~~~~R~~LVlp~l~S~riyvid~~~ep~~~~l 123 (476)
T KOG0918|consen 49 LATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGD-----SSFKRRYLVLPSLNSGRIYVIDVKTEPRKPSL 123 (476)
T ss_pred eeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccC-----cchhhhheeecccccCceEEEEeccCcCccce
Confidence 3489999999999999999999998888888888999999944 345554443333222 2345566777777778
Q ss_pred ceeeecCcEEeeccCCCCcc
Q 013652 224 LASLIGKHVFTAHGGLFRSV 243 (439)
Q Consensus 224 laa~i~~~i~~vHGGi~~~~ 243 (439)
...+.. .+++.||+.+|..
T Consensus 124 ~k~i~~-~il~~~~l~~Pht 142 (476)
T KOG0918|consen 124 EKTIDP-DILEKTGLACPHT 142 (476)
T ss_pred eeeech-hhHhhcCCcCCcc
Confidence 777766 9999999999865
No 108
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=87.02 E-value=2.2 Score=43.48 Aligned_cols=44 Identities=18% Similarity=0.134 Sum_probs=27.8
Q ss_pred CceeeeccccCCCCChH---HHHHHHHHhhhhCCCcEEEeccCCcccc
Q 013652 145 CFFVFNGDYVDRGAWGL---ETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (439)
Q Consensus 145 ~~~vfLGDyVDRG~~s~---evl~lL~~lk~~~p~~v~lLrGNHE~~~ 189 (439)
+.+||+||.|+. .... .++....+-.+.+.=-...+.||||...
T Consensus 102 DlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 102 DLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred CEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 459999999986 4333 3333333333334335688999999863
No 109
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=85.01 E-value=1.1 Score=44.74 Aligned_cols=67 Identities=22% Similarity=0.207 Sum_probs=39.0
Q ss_pred cEEEEccCCCCHH----------------HHHHHHHh-cCCCCCCCceeeeccccCCCCCh-------HHHHHHHHHhhh
Q 013652 117 RVVVVGDVHGQLH----------------DVLFLLRD-AGFPSKNCFFVFNGDYVDRGAWG-------LETFLLLLAWKV 172 (439)
Q Consensus 117 ~i~VvGDIHG~~~----------------dL~~il~~-~g~~~~~~~~vfLGDyVDRG~~s-------~evl~lL~~lk~ 172 (439)
+|+-+.|+||++. .+.+.++. ..-...+..++..||++..-+.+ .-++.++-.+
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~m-- 84 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMM-- 84 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhc--
Confidence 6888999999863 22222222 22222334466799999764433 2234444443
Q ss_pred hCCCcEEEeccCCccc
Q 013652 173 FLPHRVYLLRGNHESK 188 (439)
Q Consensus 173 ~~p~~v~lLrGNHE~~ 188 (439)
+--.+..||||..
T Consensus 85 ---gyDa~tlGNHEFd 97 (282)
T cd07407 85 ---PYDLLTIGNHELY 97 (282)
T ss_pred ---CCcEEeecccccC
Confidence 3457788999994
No 110
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=83.25 E-value=2.5 Score=41.57 Aligned_cols=67 Identities=25% Similarity=0.273 Sum_probs=45.0
Q ss_pred cEEEEccCCCCHH--HHHHHHHhcCCCCCCCceeeeccccCCC-CChHHHHHHHHHhhhhCCCcEEEeccCCccc
Q 013652 117 RVVVVGDVHGQLH--DVLFLLRDAGFPSKNCFFVFNGDYVDRG-AWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 117 ~i~VvGDIHG~~~--dL~~il~~~g~~~~~~~~vfLGDyVDRG-~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~ 188 (439)
+|.++|||=|..- .+...|.........+.+|-+||..-.| .-+.++...|..+.. .+..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccC
Confidence 5889999999863 4455555543333334467789998766 367788888877643 44444 999874
No 111
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.16 E-value=2.4 Score=44.68 Aligned_cols=69 Identities=17% Similarity=0.284 Sum_probs=53.5
Q ss_pred CcEEEEccCCCCHHHHHHHHHhcCCCCC-CCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCC
Q 013652 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSK-NCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNH 185 (439)
Q Consensus 116 ~~i~VvGDIHG~~~dL~~il~~~g~~~~-~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNH 185 (439)
.+|.||||+-|++..|.+-++....... =+.++++|++.+.-..+.|++.+.... ...|--+|++-+|-
T Consensus 6 ~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 6 AKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred ceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 4999999999999999887765543222 234899999999878889999887664 35677788888776
No 112
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=82.36 E-value=2.3 Score=38.38 Aligned_cols=63 Identities=22% Similarity=0.380 Sum_probs=50.4
Q ss_pred cEEEEccCC--CCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccc
Q 013652 117 RVVVVGDVH--GQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 117 ~i~VvGDIH--G~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~ 188 (439)
-+.|+||+| -...+|-.-|++.-.|..-.+++++|++. |.|++.+|..+. ..++++||--|..
T Consensus 2 LvL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~ 66 (183)
T KOG3325|consen 2 LVLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN 66 (183)
T ss_pred EEEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc
Confidence 468999999 45567777777777788777899999965 789999987764 6899999987764
No 113
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=82.24 E-value=2.1 Score=43.30 Aligned_cols=66 Identities=23% Similarity=0.231 Sum_probs=40.6
Q ss_pred cEEEEccCCCCHH------HHHHHHHhcCCC----CCCCceeeeccccCCCCC-------------hHHHHHHHHHhhhh
Q 013652 117 RVVVVGDVHGQLH------DVLFLLRDAGFP----SKNCFFVFNGDYVDRGAW-------------GLETFLLLLAWKVF 173 (439)
Q Consensus 117 ~i~VvGDIHG~~~------dL~~il~~~g~~----~~~~~~vfLGDyVDRG~~-------------s~evl~lL~~lk~~ 173 (439)
.|+-+.|+||++. .+..+++...-. ..+..++..||.+.-++. ..-++.++-++.
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g-- 79 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG-- 79 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC--
Confidence 4677899999963 333344433211 234557889999875543 334455555553
Q ss_pred CCCcEEEeccCCcc
Q 013652 174 LPHRVYLLRGNHES 187 (439)
Q Consensus 174 ~p~~v~lLrGNHE~ 187 (439)
-=.+..||||.
T Consensus 80 ---~Da~tlGNHEF 90 (313)
T cd08162 80 ---VQAIALGNHEF 90 (313)
T ss_pred ---CcEEecccccc
Confidence 34677899996
No 114
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=81.20 E-value=2.2 Score=47.58 Aligned_cols=67 Identities=25% Similarity=0.319 Sum_probs=43.5
Q ss_pred cEEEEccCCCCHHH----------------HHHHHHhcCCCCCCCceeeeccccCCCCChH-------------HHHHHH
Q 013652 117 RVVVVGDVHGQLHD----------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL-------------ETFLLL 167 (439)
Q Consensus 117 ~i~VvGDIHG~~~d----------------L~~il~~~g~~~~~~~~vfLGDyVDRG~~s~-------------evl~lL 167 (439)
+|+-..|+||++.. +..+++...-...+..+|-.||++...+.+- -++..+
T Consensus 27 ~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~am 106 (649)
T PRK09420 27 RIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYKAM 106 (649)
T ss_pred EEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHHHH
Confidence 88999999999742 3334554433334456788999998665431 245555
Q ss_pred HHhhhhCCCcEEEeccCCccc
Q 013652 168 LAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 168 ~~lk~~~p~~v~lLrGNHE~~ 188 (439)
-.| +--....||||.-
T Consensus 107 N~l-----gyDa~tlGNHEFd 122 (649)
T PRK09420 107 NTL-----DYDVGNLGNHEFN 122 (649)
T ss_pred Hhc-----CCcEEeccchhhh
Confidence 554 3457788999963
No 115
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=79.94 E-value=2 Score=42.65 Aligned_cols=67 Identities=16% Similarity=0.108 Sum_probs=36.9
Q ss_pred cEEEEccCCCCHHH----------HHHHHHhcCC----CCCCCceeeeccccCCCCCh-----HHHHHHHHHhhhhCCCc
Q 013652 117 RVVVVGDVHGQLHD----------VLFLLRDAGF----PSKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHR 177 (439)
Q Consensus 117 ~i~VvGDIHG~~~d----------L~~il~~~g~----~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~p~~ 177 (439)
.|+.+.|+||++.. +..+++.... ...+..++-.||++...+.+ .-++..+-++. -.
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g----~D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG----YD 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC----Cc
Confidence 57889999998633 3344443321 12344567799998432322 23334444432 23
Q ss_pred EEEeccCCccc
Q 013652 178 VYLLRGNHESK 188 (439)
Q Consensus 178 v~lLrGNHE~~ 188 (439)
+. ..||||.-
T Consensus 78 a~-~~GNHEfD 87 (285)
T cd07405 78 AM-AVGNHEFD 87 (285)
T ss_pred EE-eecccccc
Confidence 44 44999964
No 116
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=79.64 E-value=2.5 Score=46.87 Aligned_cols=67 Identities=28% Similarity=0.317 Sum_probs=42.2
Q ss_pred cEEEEccCCCCHHH----------------HHHHHHhcCCCCCCCceeeeccccCCCCChH-------------HHHHHH
Q 013652 117 RVVVVGDVHGQLHD----------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL-------------ETFLLL 167 (439)
Q Consensus 117 ~i~VvGDIHG~~~d----------------L~~il~~~g~~~~~~~~vfLGDyVDRG~~s~-------------evl~lL 167 (439)
+|+-..|+||++.. +..+++...-...+..+|-.||.+...+.+- -++..+
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~m 83 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAM 83 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHH
Confidence 78889999999743 3344554433333455778999998655431 244444
Q ss_pred HHhhhhCCCcEEEeccCCccc
Q 013652 168 LAWKVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 168 ~~lk~~~p~~v~lLrGNHE~~ 188 (439)
-.| +--....||||.-
T Consensus 84 N~l-----gyDa~tlGNHEFd 99 (626)
T TIGR01390 84 NLL-----KYDVGNLGNHEFN 99 (626)
T ss_pred hhc-----CccEEeccccccc
Confidence 444 2346788999963
No 117
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=78.34 E-value=2.7 Score=45.30 Aligned_cols=67 Identities=27% Similarity=0.357 Sum_probs=43.8
Q ss_pred cEEEEccCCCCHH------------HH---HHHHHhcCCCCCCCceeeeccccCCCCC------hHHHHHHHHHhhhhCC
Q 013652 117 RVVVVGDVHGQLH------------DV---LFLLRDAGFPSKNCFFVFNGDYVDRGAW------GLETFLLLLAWKVFLP 175 (439)
Q Consensus 117 ~i~VvGDIHG~~~------------dL---~~il~~~g~~~~~~~~vfLGDyVDRG~~------s~evl~lL~~lk~~~p 175 (439)
+|+-..|+||++. .+ ..++++..-...+..+|=.||++++.+- ....+.+|-.++
T Consensus 28 ~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~---- 103 (517)
T COG0737 28 TILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG---- 103 (517)
T ss_pred EEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC----
Confidence 7889999999998 33 3334433333334556669999998433 344566665553
Q ss_pred CcEEEeccCCccc
Q 013652 176 HRVYLLRGNHESK 188 (439)
Q Consensus 176 ~~v~lLrGNHE~~ 188 (439)
-=++..||||.-
T Consensus 104 -yDa~tiGNHEFd 115 (517)
T COG0737 104 -YDAMTLGNHEFD 115 (517)
T ss_pred -CcEEeecccccc
Confidence 346788999985
No 118
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=75.51 E-value=87 Score=30.86 Aligned_cols=47 Identities=15% Similarity=0.191 Sum_probs=27.8
Q ss_pred ceeeeccccCCCCC------------------hHHHHHHHHHhhhhCC--CcEEEeccCCccccccc
Q 013652 146 FFVFNGDYVDRGAW------------------GLETFLLLLAWKVFLP--HRVYLLRGNHESKYCTS 192 (439)
Q Consensus 146 ~~vfLGDyVDRG~~------------------s~evl~lL~~lk~~~p--~~v~lLrGNHE~~~~~~ 192 (439)
++|..||.|+.-.. ..+-+..+-.+-..-+ -.|.++.||||-.....
T Consensus 45 rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~l 111 (257)
T cd07387 45 RLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHSL 111 (257)
T ss_pred EEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccccC
Confidence 58999999986432 1222322222211112 36899999999876543
No 119
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=75.50 E-value=4.1 Score=43.05 Aligned_cols=42 Identities=26% Similarity=0.437 Sum_probs=35.9
Q ss_pred ceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccccc
Q 013652 146 FFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTS 192 (439)
Q Consensus 146 ~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~ 192 (439)
++=.+||+-||||++-.++..|..+ ..+-+--||||-..|..
T Consensus 193 hLHiVGDIyDRGP~pd~Imd~L~~y-----hsvDiQWGNHDilWmgA 234 (648)
T COG3855 193 HLHIVGDIYDRGPYPDKIMDTLINY-----HSVDIQWGNHDILWMGA 234 (648)
T ss_pred heeeecccccCCCCchHHHHHHhhc-----ccccccccCcceEEeec
Confidence 4777999999999999999998765 47888899999988754
No 120
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=75.26 E-value=3.5 Score=49.07 Aligned_cols=66 Identities=24% Similarity=0.301 Sum_probs=40.0
Q ss_pred cEEEEccCCCCHH----------------HHHHHHHhcCCCCCCCceeeeccccCCCCCh--------------HHHHHH
Q 013652 117 RVVVVGDVHGQLH----------------DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG--------------LETFLL 166 (439)
Q Consensus 117 ~i~VvGDIHG~~~----------------dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s--------------~evl~l 166 (439)
+|+-..|+||++. .+..+++...-...+..+|-.||++...+.+ .-++..
T Consensus 43 ~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~~ 122 (1163)
T PRK09419 43 QILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIKA 122 (1163)
T ss_pred EEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHHH
Confidence 7899999999863 2334455443333344345599999866521 233444
Q ss_pred HHHhhhhCCCcEEEeccCCcc
Q 013652 167 LLAWKVFLPHRVYLLRGNHES 187 (439)
Q Consensus 167 L~~lk~~~p~~v~lLrGNHE~ 187 (439)
+-.+ +--....||||.
T Consensus 123 mN~l-----gyDa~~lGNHEF 138 (1163)
T PRK09419 123 MNAL-----GYDAGTLGNHEF 138 (1163)
T ss_pred Hhhc-----CccEEeeccccc
Confidence 4333 234667999997
No 121
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=74.84 E-value=4.1 Score=46.49 Aligned_cols=66 Identities=27% Similarity=0.300 Sum_probs=42.0
Q ss_pred cEEEEccCCCCHHH----------------HHHHHHhcCCCCCCCceeeeccccCCCCCh--------------HHHHHH
Q 013652 117 RVVVVGDVHGQLHD----------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAWG--------------LETFLL 166 (439)
Q Consensus 117 ~i~VvGDIHG~~~d----------------L~~il~~~g~~~~~~~~vfLGDyVDRG~~s--------------~evl~l 166 (439)
+|+-..|+||++.. +..+++...-...+..+|..||++..-+.+ .-++..
T Consensus 117 tIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~a 196 (814)
T PRK11907 117 RILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYAA 196 (814)
T ss_pred EEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHHH
Confidence 78999999999642 233444443233445678899999765432 124555
Q ss_pred HHHhhhhCCCcEEEeccCCcc
Q 013652 167 LLAWKVFLPHRVYLLRGNHES 187 (439)
Q Consensus 167 L~~lk~~~p~~v~lLrGNHE~ 187 (439)
+-.|. --....||||.
T Consensus 197 mN~LG-----yDA~tLGNHEF 212 (814)
T PRK11907 197 LEALG-----FDAGTLGNHEF 212 (814)
T ss_pred HhccC-----CCEEEechhhc
Confidence 55542 34778899996
No 122
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=74.66 E-value=4.6 Score=37.75 Aligned_cols=72 Identities=15% Similarity=0.204 Sum_probs=37.4
Q ss_pred EEEEccCCCC-----HHHHHHHHHhcC-CCCCCCceeeeccccCCCCChH------------H-HHHHHHHhh--hhCCC
Q 013652 118 VVVVGDVHGQ-----LHDVLFLLRDAG-FPSKNCFFVFNGDYVDRGAWGL------------E-TFLLLLAWK--VFLPH 176 (439)
Q Consensus 118 i~VvGDIHG~-----~~dL~~il~~~g-~~~~~~~~vfLGDyVDRG~~s~------------e-vl~lL~~lk--~~~p~ 176 (439)
|++++|+|=. ++.|.++|+.+. -...+ .+|++|+++|.-.... + .+..+..+. +..--
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~-~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 79 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPD-VLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPST 79 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTEC-EEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCS
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCc-EEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhccccc
Confidence 5677777744 566677777665 33333 4999999999632221 1 111111111 11224
Q ss_pred cEEEeccCCccccc
Q 013652 177 RVYLLRGNHESKYC 190 (439)
Q Consensus 177 ~v~lLrGNHE~~~~ 190 (439)
+|+++.|+||-...
T Consensus 80 ~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 80 QVVLVPGPNDPTSS 93 (209)
T ss_dssp EEEEE--TTCTT-S
T ss_pred EEEEeCCCcccccc
Confidence 89999999998654
No 123
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=74.48 E-value=5.5 Score=43.44 Aligned_cols=67 Identities=21% Similarity=0.209 Sum_probs=40.2
Q ss_pred cEEEEccCCCCHHH---------------------HHHHHHhcCCCCCCCceeeeccccCCCCCh-----HHHHHHHHHh
Q 013652 117 RVVVVGDVHGQLHD---------------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAW 170 (439)
Q Consensus 117 ~i~VvGDIHG~~~d---------------------L~~il~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~l 170 (439)
.|+-+.|+||++.. |..+++...-...+..++..||.+...+.+ ...+.++-++
T Consensus 2 tILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~ 81 (550)
T TIGR01530 2 SIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA 81 (550)
T ss_pred EEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc
Confidence 46677888887533 334444443333455678899998765433 2334444444
Q ss_pred hhhCCCcEEEeccCCccc
Q 013652 171 KVFLPHRVYLLRGNHESK 188 (439)
Q Consensus 171 k~~~p~~v~lLrGNHE~~ 188 (439)
+--.+..||||.-
T Consensus 82 -----g~Da~~lGNHEFd 94 (550)
T TIGR01530 82 -----GFDFFTLGNHEFD 94 (550)
T ss_pred -----CCCEEEecccccc
Confidence 3357788999963
No 124
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=64.17 E-value=9.5 Score=43.44 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=40.7
Q ss_pred cEEEEccCCCCHHH----------------HHHHHHhcCCCCCCCceeeeccccCCCCCh-------------------H
Q 013652 117 RVVVVGDVHGQLHD----------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-------------------L 161 (439)
Q Consensus 117 ~i~VvGDIHG~~~d----------------L~~il~~~g~~~~~~~~vfLGDyVDRG~~s-------------------~ 161 (439)
+|+-..|+||++.. +..++++..-...+..+|..||++-.-+.+ .
T Consensus 41 ~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~~~ 120 (780)
T PRK09418 41 RILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSYTH 120 (780)
T ss_pred EEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccccch
Confidence 89999999999632 333444443233445678899988543332 2
Q ss_pred HHHHHHHHhhhhCCCcEEEeccCCcc
Q 013652 162 ETFLLLLAWKVFLPHRVYLLRGNHES 187 (439)
Q Consensus 162 evl~lL~~lk~~~p~~v~lLrGNHE~ 187 (439)
-++.++-.|. -=....||||.
T Consensus 121 p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 121 PLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred HHHHHHhccC-----CCEEecccccc
Confidence 3445554442 34678899995
No 125
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=61.39 E-value=14 Score=38.74 Aligned_cols=73 Identities=16% Similarity=0.190 Sum_probs=40.8
Q ss_pred CcEEEEccCC-CCHHHH--HHHHHhcCCCCCCCceeeeccccCCCCChH------HHHHHHHHhhh-hCCCcEEEeccCC
Q 013652 116 SRVVVVGDVH-GQLHDV--LFLLRDAGFPSKNCFFVFNGDYVDRGAWGL------ETFLLLLAWKV-FLPHRVYLLRGNH 185 (439)
Q Consensus 116 ~~i~VvGDIH-G~~~dL--~~il~~~g~~~~~~~~vfLGDyVDRG~~s~------evl~lL~~lk~-~~p~~v~lLrGNH 185 (439)
-+++++||-= |.+... .+.+....-...-+.+|-+||-.+.|..++ +.++-++.-+. ...-..+++.|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 3899999953 322211 122222211122234888999888888764 34444442211 0113689999999
Q ss_pred ccc
Q 013652 186 ESK 188 (439)
Q Consensus 186 E~~ 188 (439)
|.+
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 974
No 126
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=58.95 E-value=10 Score=41.34 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=37.5
Q ss_pred cEEEEccCCCCHH----------HHHHHHHhcC----CCCCCCceeeeccccCCCCCh-----HHHHHHHHHhhhhCCCc
Q 013652 117 RVVVVGDVHGQLH----------DVLFLLRDAG----FPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHR 177 (439)
Q Consensus 117 ~i~VvGDIHG~~~----------dL~~il~~~g----~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~p~~ 177 (439)
.|+-+.|+||++. .+..+++... ....+..+|..||++...+.+ .-++.++-++. -.
T Consensus 36 til~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g----~D 111 (551)
T PRK09558 36 TILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG----YD 111 (551)
T ss_pred EEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----CC
Confidence 7889999999874 1223343322 113345577899998643322 22334443332 23
Q ss_pred EEEeccCCccc
Q 013652 178 VYLLRGNHESK 188 (439)
Q Consensus 178 v~lLrGNHE~~ 188 (439)
+.. .||||.-
T Consensus 112 a~t-lGNHEFD 121 (551)
T PRK09558 112 AMA-VGNHEFD 121 (551)
T ss_pred EEc-ccccccC
Confidence 444 4999974
No 127
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=58.63 E-value=14 Score=36.63 Aligned_cols=69 Identities=23% Similarity=0.351 Sum_probs=44.2
Q ss_pred CCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHhhhhCC-CcEEEeccCCccccc
Q 013652 113 DQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLP-HRVYLLRGNHESKYC 190 (439)
Q Consensus 113 ~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p-~~v~lLrGNHE~~~~ 190 (439)
+...+.+.++|.|+...+.. ..|+.|- ++-+||+-.-|. +-||..+=-.+ -..| ..=+.|+||||..+-
T Consensus 59 ~~~~r~VcisdtH~~~~~i~------~~p~gDv-lihagdfT~~g~-~~ev~~fn~~~-gslph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 59 PGYARFVCISDTHELTFDIN------DIPDGDV-LIHAGDFTNLGL-PEEVIKFNEWL-GSLPHEYKIVIAGNHELTFD 128 (305)
T ss_pred CCceEEEEecCcccccCccc------cCCCCce-EEeccCCccccC-HHHHHhhhHHh-ccCcceeeEEEeeccceeec
Confidence 35678999999998865533 3455554 788999887553 44555442221 1223 244789999999654
No 128
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=57.73 E-value=33 Score=34.42 Aligned_cols=76 Identities=16% Similarity=0.181 Sum_probs=49.0
Q ss_pred CCCCcEEEEccCC----CCHHHHHHHHHhcC--CCCC--CCceeeeccccCCC----CCh----HHHHHHHHHh-hhhCC
Q 013652 113 DQDSRVVVVGDVH----GQLHDVLFLLRDAG--FPSK--NCFFVFNGDYVDRG----AWG----LETFLLLLAW-KVFLP 175 (439)
Q Consensus 113 ~~~~~i~VvGDIH----G~~~dL~~il~~~g--~~~~--~~~~vfLGDyVDRG----~~s----~evl~lL~~l-k~~~p 175 (439)
+...+++|+||+| -.++.|.++|.... .+.. ...+||.|+++-+. ..+ .|-+.-|..+ ...||
T Consensus 25 ~~~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp 104 (291)
T PTZ00235 25 DKRHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFK 104 (291)
T ss_pred CCceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhCh
Confidence 3456899999999 55677777787662 1211 23589999998652 222 2344444432 23455
Q ss_pred -----CcEEEeccCCccc
Q 013652 176 -----HRVYLLRGNHESK 188 (439)
Q Consensus 176 -----~~v~lLrGNHE~~ 188 (439)
.+++++.|-.|-.
T Consensus 105 ~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 105 LILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHHhcCeEEEECCCCCCC
Confidence 5899999999963
No 129
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=57.37 E-value=15 Score=39.03 Aligned_cols=72 Identities=17% Similarity=0.057 Sum_probs=39.4
Q ss_pred CCcEEEEccCCCCHHH---HHHHHHhcCCCCCCCceeeecccc--CCCCC--hHHHHHHHHHhhhhCCCcEEEeccCCcc
Q 013652 115 DSRVVVVGDVHGQLHD---VLFLLRDAGFPSKNCFFVFNGDYV--DRGAW--GLETFLLLLAWKVFLPHRVYLLRGNHES 187 (439)
Q Consensus 115 ~~~i~VvGDIHG~~~d---L~~il~~~g~~~~~~~~vfLGDyV--DRG~~--s~evl~lL~~lk~~~p~~v~lLrGNHE~ 187 (439)
..++.|+||+= +... .+...+... .-+.++++||+. |.... --+-..++..+...- -..+.-||||.
T Consensus 147 ~~~~~i~GDlG-~~~~~~s~~~~~~~~~---k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~v--Pymv~~GNHE~ 220 (452)
T KOG1378|consen 147 PTRAAIFGDMG-CTEPYTSTLRNQEENL---KPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYV--PYMVCSGNHEI 220 (452)
T ss_pred ceeEEEEcccc-ccccccchHhHHhccc---CCcEEEEecchhhcCCCCccchHHHHhhhhhhhccC--ceEEecccccc
Confidence 45899999983 3322 223333222 234499999977 33331 122233333332222 35778899999
Q ss_pred ccccc
Q 013652 188 KYCTS 192 (439)
Q Consensus 188 ~~~~~ 192 (439)
...+.
T Consensus 221 d~~~~ 225 (452)
T KOG1378|consen 221 DWPPQ 225 (452)
T ss_pred cCCCc
Confidence 87653
No 130
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=50.90 E-value=43 Score=31.49 Aligned_cols=85 Identities=19% Similarity=0.232 Sum_probs=61.2
Q ss_pred CceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCCccccccccccchH----------------HHHHHhcCcc
Q 013652 145 CFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEK----------------EVMAKYGDKG 208 (439)
Q Consensus 145 ~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNHE~~~~~~~ygf~~----------------e~~~~~g~~~ 208 (439)
..+||||- |-+.-|.+.+|-+|+.+|-.+.++ .|+-|+|..++...|.. |..+.| -
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~---l 111 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW---L 111 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhh---h
Confidence 35899985 999999999999999888777666 89999988765443321 122222 2
Q ss_pred hHHHHHHhhhhcCCCceeeecCcEEeecc
Q 013652 209 KHAYRKCLGCFEGLPLASLIGKHVFTAHG 237 (439)
Q Consensus 209 ~~~~~~~~~~f~~LPlaa~i~~~i~~vHG 237 (439)
..+|..+...+-++++...+-..++.+-|
T Consensus 112 tSv~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 112 TSVFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred hhHHHHHHHHHHHheEEEecCCCEEEECC
Confidence 35666777777778888777777776776
No 131
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=50.15 E-value=46 Score=36.19 Aligned_cols=55 Identities=18% Similarity=0.163 Sum_probs=40.5
Q ss_pred CCcEEEEccCC------------CCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHHHHHh
Q 013652 115 DSRVVVVGDVH------------GQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAW 170 (439)
Q Consensus 115 ~~~i~VvGDIH------------G~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~l 170 (439)
-.+|.|..|+| -.|..|..||..+.-...+- ++.=||+..--.-|-.+|...+.|
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDm-iLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDM-ILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcE-EEecCcccccCCccHHHHHHHHHH
Confidence 45899999999 24568888988876554444 778899998877787766655444
No 132
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=45.58 E-value=1.4e+02 Score=29.26 Aligned_cols=121 Identities=24% Similarity=0.367 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHhhCCCeEEeccCCCCCcEEEEccCCCCHHHHHHHHHhcCCCCCCCceeeeccccCCCCChHHHHHH
Q 013652 87 DVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLL 166 (439)
Q Consensus 87 ~~~~~l~~~a~~il~~ep~~~~i~~~~~~~~i~VvGDIHG~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~s~evl~l 166 (439)
..+..|+.+---||.+...-+-+.. +.-.|+++.||--|+... .| .|| .=+|.+
T Consensus 58 ~~~~~~ln~rdmiln~lh~hvflk~-daitpciflgdhtgdrfs--ti---------------~gd--------~yiltl 111 (318)
T PF13258_consen 58 KTLYSLLNTRDMILNELHQHVFLKD-DAITPCIFLGDHTGDRFS--TI---------------FGD--------QYILTL 111 (318)
T ss_pred HHHHHHhhHhHHHHHhhhheEEecC-CCcccceeecCcccchhh--hh---------------cch--------HHHHHH
Confidence 3455556555556666655565655 455677777776665311 11 011 112333
Q ss_pred HHHhhhh-------CCCcEEEeccCCccccccccccchHHHHHHhcCcchHHHHHHhhhhcCCCceeeec-CcEEeeccC
Q 013652 167 LLAWKVF-------LPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIG-KHVFTAHGG 238 (439)
Q Consensus 167 L~~lk~~-------~p~~v~lLrGNHE~~~~~~~ygf~~e~~~~~g~~~~~~~~~~~~~f~~LPlaa~i~-~~i~~vHGG 238 (439)
|-++.-. -.++|++|-||||.-. |..| ..-........++.| +....+|++.--. .+++..|-|
T Consensus 112 lnsm~nme~nkdsrinknvvvlagnhein~-ngny---~arlanhkls~gDTY----nlIKtldVC~YD~erkvltsHHG 183 (318)
T PF13258_consen 112 LNSMRNMEGNKDSRINKNVVVLAGNHEINF-NGNY---MARLANHKLSAGDTY----NLIKTLDVCNYDPERKVLTSHHG 183 (318)
T ss_pred HHHHHhcccccccccccceEEEecCceecc-CchH---HHHHhhCCCCccchh----hccccccccccCcchhhhhcccC
Confidence 3333211 2368999999999853 2222 111111111123334 3456678775543 468888888
Q ss_pred CCC
Q 013652 239 LFR 241 (439)
Q Consensus 239 i~~ 241 (439)
|-.
T Consensus 184 Iir 186 (318)
T PF13258_consen 184 IIR 186 (318)
T ss_pred cee
Confidence 864
No 133
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=33.75 E-value=67 Score=25.66 Aligned_cols=69 Identities=17% Similarity=0.050 Sum_probs=46.6
Q ss_pred cEEEEccCCCCHHHHHHHHHhcCC-CCCCCceeeeccccCCCCChHHHHHHHHHhhhhCCCcEEEeccCC
Q 013652 117 RVVVVGDVHGQLHDVLFLLRDAGF-PSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNH 185 (439)
Q Consensus 117 ~i~VvGDIHG~~~dL~~il~~~g~-~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v~lLrGNH 185 (439)
.+.|+=|---+.+.+..+++.+.- .+....++.+|+.-|+|....+....+-.+...+...+++...|+
T Consensus 13 ~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 13 GPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 567888877788888888876632 234556889999999888888866666665555566666655554
No 134
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=29.00 E-value=42 Score=29.72 Aligned_cols=85 Identities=21% Similarity=0.282 Sum_probs=47.2
Q ss_pred cCCCCHHHHHHHHHhcCCCCC-CCceeeeccccCCCCChHHHHHHHHHhhhhCCCcE--EEeccCCccccccccccchHH
Q 013652 123 DVHGQLHDVLFLLRDAGFPSK-NCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRV--YLLRGNHESKYCTSVYGFEKE 199 (439)
Q Consensus 123 DIHG~~~dL~~il~~~g~~~~-~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~p~~v--~lLrGNHE~~~~~~~ygf~~e 199 (439)
|+.|++..|.+.|+.+++|.. +..-+-.||= ..-+.++.+++ +.|+..| +++.=++|. ||-.
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~p----~afLpil~~~L---~~yS~~va~~l~~~g~eL------~~k~-- 65 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGDP----SAFLPILHYAL---LSYSTHVARLLVDRGYEL------YGKN-- 65 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCCH----HHHHHHHHHHH---HcCCHHHHHHHHHcCchh------hcCC--
Confidence 899999999999999999843 2222334441 11233343333 2444333 222222222 1110
Q ss_pred HHHHhcCcchHHHHHHhhhhcCCCcee
Q 013652 200 VMAKYGDKGKHAYRKCLGCFEGLPLAS 226 (439)
Q Consensus 200 ~~~~~g~~~~~~~~~~~~~f~~LPlaa 226 (439)
-.+| .+.+|+.+.+.|.+-|...
T Consensus 66 -D~RF---~E~vyk~LRdef~YkP~lT 88 (131)
T PF15007_consen 66 -DLRF---VESVYKLLRDEFNYKPSLT 88 (131)
T ss_pred -hHHH---HHHHHHHHHHHhCCCCCCC
Confidence 1112 3578899999999988643
No 135
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=28.80 E-value=68 Score=32.12 Aligned_cols=73 Identities=23% Similarity=0.312 Sum_probs=42.2
Q ss_pred CCcEEEEccC--CCCHHHHHHHHHh--cCCCCCCCceeeecccc-CCCCChH------HHHHHHHHhhhhCCCcEEEecc
Q 013652 115 DSRVVVVGDV--HGQLHDVLFLLRD--AGFPSKNCFFVFNGDYV-DRGAWGL------ETFLLLLAWKVFLPHRVYLLRG 183 (439)
Q Consensus 115 ~~~i~VvGDI--HG~~~dL~~il~~--~g~~~~~~~~vfLGDyV-DRG~~s~------evl~lL~~lk~~~p~~v~lLrG 183 (439)
.-+++||||- +|.+..-+..+.. +|-.-.-+.+|-+||=+ |-|..+. +.+.-++.-..+ ....|.+.|
T Consensus 43 slsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSL-QkpWy~vlG 121 (336)
T KOG2679|consen 43 SLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSL-QKPWYSVLG 121 (336)
T ss_pred ceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccc-ccchhhhcc
Confidence 4589999994 7877665554432 22111223478899954 6666652 333333321111 135789999
Q ss_pred CCccc
Q 013652 184 NHESK 188 (439)
Q Consensus 184 NHE~~ 188 (439)
|||.+
T Consensus 122 NHDyr 126 (336)
T KOG2679|consen 122 NHDYR 126 (336)
T ss_pred Ccccc
Confidence 99986
No 136
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=26.07 E-value=48 Score=36.63 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=30.8
Q ss_pred ChhhHHHHHHHcCCe----EEEEeccCCCCcCCCCCCccccCCceeeccCCCCeEEEEE
Q 013652 325 GPDSTEEFLKKFSLK----LIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLF 379 (439)
Q Consensus 325 G~~~~~~FL~~~~l~----~IIRgHe~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvF 379 (439)
.++..+..|+..|++ .||-||.++. +..|=... -++||++.|-
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk----------~k~GEsPI--Ka~Gkl~VID 553 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVK----------VKKGESPI--KANGKLIVID 553 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccc----------cCCCCCCc--cCCCEEEEEc
Confidence 455677788889997 9999999863 34554332 3579998883
No 137
>PF03494 Beta-APP: Beta-amyloid peptide (beta-APP); InterPro: IPR013803 Amyloid-beta precursor protein (APP, or A4) is associated with Alzheimer's disease (AD), because one of its breakdown products, amyloid-beta (A-beta), aggregates to form amyloid or senile plaques [, ]. Mutations in APP or in proteins that process APP have been linked with early-onset, familial AD. Individuals with Down's syndrome carry an extra copy of chromosome 21, which contains the APP gene, and almost invariably develop amyloid plaques and Alzheimer's symptoms. APP is important for the neurogenesis and neuronal regeneration, either through the intact protein, or through its many breakdown products []. APP consists of a large N-terminal extracellular region containing heparin-binding and copper-binding sites, a short hydrophobic transmembrane domain, and a short C-terminal intracellular domain. The N-terminal region is similar in structure to cysteine-rich growth factors and appears to function as a cell surface receptor, contributing to neurite growth, neuronal adhesion, axonogenesis and cell mobility []. APP acts as a kinesin I membrane receptor to mediate the axonal transport of beta-secretase and presenilin 1. The N-terminal domain can regulate neurite outgrowth through its binding to heparin and collagen I and IV, which are components of the extracellular matrix. APP is also coupled to apoptosis-inducing pathways, and is involved in copper homeostasis/oxidative stress through copper ion reduction, where copper-metallated APP induces neuronal death []. The C-terminal intracellular domain appears to be involved in transcription regulation through protein-protein interactions. APP can promote transcription activation through binding to APBB1/Tip60, and may bind to the adaptor protein FE65 to transactivate a wide variety of different promoters. APP can be processed by different sets of enzymes: In the non-amyloidogenic (non-plaque-forming) pathway, APP is cleaved by alpha-secretase to yield a soluble N-terminal sAPP-alpha (neuroprotective) and a membrane-bound CTF-alpha. CTF-alpha is broken-down by presenilin-containing gamma-secretase to yield soluble p3 and membrane-bound AICD (nuclear signalling). In the amyloidogenic pathway (plaque-forming), APP is broken down by beta-secretase to yield soluble sAPP-beta and membrane-bound CTF-beta. CTF-beta is broken down by gamma-secretase to yield soluble amyloid-beta and membrane-bound AICD. Amyloid-beta is required for neuronal function, but can aggregate to form amyloid plaques that seem to disrupt brain cells by clogging points of cell-cell contact. This entry represents the amyloid-beta peptide (A-beta), which originates as a breakdown product from the cleavage of amyloid-beta precursor protein (APP, or A4), an integral, glycosylated membrane brain protein. More information about these protein can be found at Protein of the Month: Amyloid-beta Precursor Protein [].; GO: 0005488 binding, 0016021 integral to membrane; PDB: 2LMQ_F 3JTI_B 2LMO_B 3MOQ_D 2LNQ_E 2LMP_G 2BEG_B 1AMC_A 3OW9_B 3U0T_F ....
Probab=24.71 E-value=58 Score=22.18 Aligned_cols=28 Identities=39% Similarity=0.506 Sum_probs=18.6
Q ss_pred cCCceeeccCCCCeEEEEEcCCCCCCcccccccCCCcEEEEEE
Q 013652 361 DNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVL 403 (439)
Q Consensus 361 ~~Gy~~~~~~~~g~liTvFSa~nY~~~~~~~~~~~N~gA~l~i 403 (439)
..||+..| .|+ +|-|- +..+|+||++-+
T Consensus 4 ~a~yeV~~----~kl--vf~aE---------DvgSNKGAIIGL 31 (39)
T PF03494_consen 4 NAGYEVYH----KKL--VFLAE---------DVGSNKGAIIGL 31 (39)
T ss_dssp CCCCCCCC----CCC--CCCCC---------CCSSSSSEEEEE
T ss_pred ccCcEEEe----eEE--EEEhh---------HcCCCCceEEEE
Confidence 46888766 455 45553 456899999754
No 138
>COG3792 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.95 E-value=21 Score=31.04 Aligned_cols=29 Identities=31% Similarity=0.473 Sum_probs=19.9
Q ss_pred EccCCC------CHHHHHHHHHhcCCCCCCCceeeeccccCCC
Q 013652 121 VGDVHG------QLHDVLFLLRDAGFPSKNCFFVFNGDYVDRG 157 (439)
Q Consensus 121 vGDIHG------~~~dL~~il~~~g~~~~~~~~vfLGDyVDRG 157 (439)
+||.|| ..+++....+.. ++++|||.|+|
T Consensus 26 i~~~~g~~~~~~d~dsfeE~kndf--------~~ll~~lld~G 60 (122)
T COG3792 26 IGDAYGLSSGQRDPDSFEERKNDF--------FFLLGDLLDEG 60 (122)
T ss_pred HHHHhCCccccCChhhHHHHHHHH--------HHHHHHHhcCC
Confidence 466666 566666665533 67789998887
No 139
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=22.09 E-value=2.1e+02 Score=28.20 Aligned_cols=67 Identities=25% Similarity=0.240 Sum_probs=31.5
Q ss_pred CcEEEEccCCCCH--HHHHHHHHhcCCCCCCCceeeeccccCCCCC-hHHHHHHHHHhhhhCCCcEEEeccCCcc
Q 013652 116 SRVVVVGDVHGQL--HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAW-GLETFLLLLAWKVFLPHRVYLLRGNHES 187 (439)
Q Consensus 116 ~~i~VvGDIHG~~--~dL~~il~~~g~~~~~~~~vfLGDyVDRG~~-s~evl~lL~~lk~~~p~~v~lLrGNHE~ 187 (439)
||+.++|||-|.- ..+...|..+.....-+.+|.+|.-.-.|.- ..+....|+.. .-=++-.|||=+
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~-----G~dviT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEA-----GADVITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHh-----CCCEEecccccc
Confidence 4677777777764 2222223222221112335556665554442 34444444433 233556677755
No 140
>PF14164 YqzH: YqzH-like protein
Probab=21.74 E-value=3.8e+02 Score=20.75 Aligned_cols=45 Identities=9% Similarity=0.145 Sum_probs=32.1
Q ss_pred CHHHHHHHHH-HhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhCCC
Q 013652 57 TVEWIQDLTL-TFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPN 105 (439)
Q Consensus 57 ~~~~i~~l~~-~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ 105 (439)
...||++|+. .|+.-..+. -...|+..+...|++...+.-.++|+
T Consensus 2 ~ek~I~Kmi~~~l~QYg~d~----~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 2 NEKLIEKMIINCLRQYGYDV----ECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred cHHHHHHHHHHHHHHhCCcc----cCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 3568888864 455543321 13478899999999999999888875
Done!