Query 013654
Match_columns 439
No_of_seqs 382 out of 2603
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 14:37:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013654.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013654hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zo4_A Metallo-beta-lactamase 100.0 2E-30 6.8E-35 256.0 22.4 210 185-412 2-258 (317)
2 4ad9_A Lactb2, beta-lactamase- 100.0 5.2E-29 1.8E-33 243.2 23.7 213 181-412 6-225 (289)
3 3l6n_A Metallo-beta-lactamase; 100.0 4.9E-29 1.7E-33 233.0 20.7 197 180-392 3-205 (219)
4 1m2x_A Class B carbapenemase B 100.0 5.9E-29 2E-33 233.7 20.4 206 183-406 3-213 (223)
5 3hnn_A Putative diflavin flavo 100.0 9.4E-29 3.2E-33 238.6 18.7 219 176-402 3-247 (262)
6 1a7t_A Metallo-beta-lactamase; 100.0 1.7E-28 5.7E-33 232.2 18.7 196 180-392 9-211 (232)
7 4eyb_A Beta-lactamase NDM-1; m 100.0 7.9E-29 2.7E-33 240.4 16.5 194 181-392 48-255 (270)
8 1mqo_A Beta-lactamase II; alph 100.0 3.6E-28 1.2E-32 228.9 18.5 198 180-393 14-216 (227)
9 2fhx_A SPM-1; metallo-beta-lac 100.0 1.2E-27 4.1E-32 227.5 20.6 203 179-406 7-238 (246)
10 3iog_A Beta-lactamase; hydrola 100.0 1.4E-27 4.9E-32 223.8 20.0 197 182-406 3-222 (227)
11 4hl2_A Beta-lactamase NDM-1; s 100.0 5.9E-28 2E-32 229.8 16.1 205 180-403 20-237 (243)
12 2vw8_A PA1000, PQSE; quinolone 100.0 1.8E-27 6E-32 234.0 19.0 198 183-404 8-238 (303)
13 2y8b_A Metallo-B-lactamase; hy 100.0 1.8E-27 6.2E-32 230.1 18.6 196 179-392 40-244 (265)
14 3q6v_A Beta-lactamase; metallo 100.0 2E-27 6.9E-32 223.7 17.8 198 181-406 5-229 (233)
15 1jjt_A IMP-1 metallo beta-lact 99.9 3.6E-27 1.2E-31 222.5 17.8 194 180-393 5-203 (228)
16 1k07_A FEZ-1 beta-lactamase; m 99.9 2.5E-26 8.4E-31 221.1 19.8 190 179-392 5-220 (263)
17 1xm8_A Glyoxalase II; structur 99.9 1.8E-26 6.3E-31 222.1 17.0 151 230-392 23-174 (254)
18 3m8t_A 'BLR6230 protein; subcl 99.9 9.3E-26 3.2E-30 219.8 19.2 187 182-393 38-248 (294)
19 2ohh_A Type A flavoprotein FPR 99.9 1.6E-25 5.6E-30 228.1 20.7 210 182-405 3-251 (404)
20 4dik_A Flavoprotein; TM0755, e 99.9 1.2E-25 4.2E-30 230.4 19.5 222 171-403 6-257 (410)
21 2cfu_A SDSA1; SDS-hydrolase, l 99.9 1.2E-25 4E-30 243.4 19.8 208 182-412 105-368 (658)
22 2p97_A Hypothetical protein; p 99.9 3.5E-25 1.2E-29 205.2 18.6 191 184-404 2-199 (201)
23 1ycg_A Nitric oxide reductase; 99.9 5.3E-25 1.8E-29 223.9 21.2 216 184-407 3-248 (398)
24 2qed_A Hydroxyacylglutathione 99.9 2.8E-25 9.6E-30 214.3 18.1 148 230-392 29-177 (258)
25 1qh5_A Glyoxalase II, protein 99.9 2.8E-25 9.5E-30 214.6 17.4 147 230-391 23-177 (260)
26 2q9u_A A-type flavoprotein; fl 99.9 5.4E-25 1.8E-29 225.4 20.1 216 182-406 8-251 (414)
27 2gcu_A Putative hydroxyacylglu 99.9 1E-24 3.5E-29 208.8 19.3 151 230-391 28-187 (245)
28 2xf4_A Hydroxyacylglutathione 99.9 5.5E-25 1.9E-29 204.3 16.0 158 230-392 24-197 (210)
29 4ax1_B Metallo-beta-lactamase 99.9 2.2E-24 7.6E-29 210.6 20.6 186 183-392 42-255 (303)
30 1e5d_A Rubredoxin\:oxygen oxid 99.9 1.7E-24 5.7E-29 220.5 20.1 207 183-405 2-247 (402)
31 4efz_A Metallo-beta-lactamase 99.9 3.1E-24 1.1E-28 210.8 20.5 159 230-390 28-219 (298)
32 2p18_A Glyoxalase II; metallop 99.9 1.3E-24 4.5E-29 215.2 16.7 153 230-392 51-231 (311)
33 2zwr_A Metallo-beta-lactamase 99.9 2.1E-24 7.1E-29 200.5 16.4 154 230-392 22-189 (207)
34 1sml_A Protein (penicillinase) 99.9 3.9E-24 1.3E-28 206.4 17.4 187 182-392 21-230 (269)
35 3r2u_A Metallo-beta-lactamase 99.9 3.8E-24 1.3E-28 223.1 18.3 156 230-389 48-221 (466)
36 2yhe_A SEC-alkyl sulfatase; hy 99.8 1.2E-25 4.2E-30 242.6 0.0 206 181-409 114-376 (668)
37 3tp9_A Beta-lactamase and rhod 99.9 7.7E-24 2.6E-28 221.0 13.5 156 230-389 27-201 (474)
38 3adr_A Putative uncharacterize 99.9 5.2E-23 1.8E-27 196.9 17.6 181 188-392 3-212 (261)
39 3dha_A N-acyl homoserine lacto 99.9 7.3E-23 2.5E-27 195.5 11.8 155 230-390 48-242 (254)
40 3esh_A Protein similar to meta 99.9 9E-22 3.1E-26 191.1 11.3 160 230-392 57-256 (280)
41 3aj3_A MLR6805 protein, 4-pyri 99.9 1.6E-21 5.3E-26 188.3 10.9 154 230-390 44-255 (274)
42 1ztc_A Hypothetical protein TM 99.8 1.5E-21 5E-26 183.4 7.8 148 230-392 44-216 (221)
43 1p9e_A Methyl parathion hydrol 99.8 3.2E-21 1.1E-25 192.3 9.8 160 230-392 106-307 (331)
44 2r2d_A AGR_PTI_140P, Zn-depend 99.8 1.2E-20 4.2E-25 182.0 12.2 155 230-389 52-261 (276)
45 1zkp_A Hypothetical protein BA 99.6 8.5E-16 2.9E-20 147.7 13.4 159 230-392 52-240 (268)
46 3zq4_A Ribonuclease J 1, RNAse 99.6 4.1E-15 1.4E-19 157.9 9.9 130 221-351 20-168 (555)
47 3qsj_A Nudix hydrolase; struct 99.5 6.9E-15 2.3E-19 139.2 6.5 74 77-152 115-193 (232)
48 3iek_A Ribonuclease TTHA0252; 99.5 9.7E-14 3.3E-18 143.1 14.7 163 223-388 14-224 (431)
49 3bk2_A RNAse J, metal dependen 99.5 2.7E-14 9.2E-19 152.0 8.6 128 223-350 30-182 (562)
50 2ycb_A Beta-CAsp RNAse, cleava 99.5 3.6E-13 1.2E-17 145.3 17.3 158 230-388 202-417 (636)
51 2xr1_A Cleavage and polyadenyl 99.5 1.2E-13 4.1E-18 149.0 11.8 118 230-348 206-356 (640)
52 2i7x_A Protein CFT2; polyadeny 99.5 9.1E-13 3.1E-17 143.6 18.1 129 220-349 12-181 (717)
53 3g1p_A Protein PHNP; C-P lyase 99.5 1.4E-13 4.8E-18 131.8 9.9 114 230-350 48-167 (258)
54 3md7_A Beta-lactamase-like; ss 99.5 3.1E-13 1.1E-17 132.0 12.2 156 231-392 78-267 (293)
55 2e7y_A TRNAse Z; tRNA maturati 99.4 1.4E-13 4.7E-18 132.5 8.7 110 222-338 11-146 (280)
56 3kl7_A Putative metal-dependen 99.4 2.4E-12 8.1E-17 121.9 14.0 144 230-390 46-212 (235)
57 3af5_A Putative uncharacterize 99.4 8.7E-13 3E-17 142.7 12.2 119 230-349 211-369 (651)
58 2cbn_A Ribonuclease Z; phospho 99.4 1.9E-12 6.5E-17 126.4 12.1 106 230-338 33-152 (306)
59 2az4_A Hypothetical protein EF 99.4 2.5E-12 8.4E-17 132.1 11.5 92 255-350 83-192 (429)
60 2i7t_A Cleavage and polyadenyl 99.3 7.6E-13 2.6E-17 137.3 7.6 127 223-350 25-182 (459)
61 1y44_A Ribonuclease Z; zinc-de 99.3 2.5E-12 8.4E-17 126.6 10.0 106 230-338 31-150 (320)
62 2wyl_A L-ascorbate-6-phosphate 99.3 1E-11 3.4E-16 124.9 13.0 138 254-391 107-285 (360)
63 3bv6_A Metal-dependent hydrola 99.3 1.8E-11 6.1E-16 124.0 13.2 152 254-405 131-327 (379)
64 2bib_A CBPE, teichoic acid pho 99.2 7.5E-11 2.6E-15 124.9 14.9 120 230-349 27-205 (547)
65 2p4z_A Metal-dependent hydrola 99.2 1.1E-10 3.7E-15 113.5 13.1 168 220-390 30-258 (284)
66 3zwf_A Zinc phosphodiesterase 99.2 7.3E-11 2.5E-15 119.1 10.6 106 230-338 28-190 (368)
67 3jxp_A Coenzyme PQQ synthesis 99.2 1.6E-10 5.4E-15 114.5 12.0 115 232-349 53-203 (321)
68 4b87_A DNA cross-LINK repair 1 99.2 8.5E-11 2.9E-15 118.5 10.2 107 229-351 35-146 (367)
69 3rpc_A Possible metal-dependen 99.1 7.3E-10 2.5E-14 106.3 16.1 127 256-390 64-229 (264)
70 3zdk_A 5' exonuclease apollo; 99.0 9.2E-10 3.1E-14 109.7 8.9 107 228-350 7-124 (336)
71 3h3e_A Uncharacterized protein 98.9 3.1E-08 1.1E-12 95.4 14.8 67 219-293 28-94 (267)
72 1vjn_A Zn-dependent hydrolase 98.8 1.3E-08 4.5E-13 95.2 10.6 127 230-391 29-177 (220)
73 3u53_A BIS(5'-nucleosyl)-tetra 97.3 0.00049 1.7E-08 59.7 7.4 99 15-148 22-126 (155)
74 1sjy_A MUTT/nudix family prote 97.2 0.0016 5.3E-08 56.2 9.1 112 7-151 17-134 (159)
75 3q91_A Uridine diphosphate glu 97.1 0.00015 5E-09 67.5 2.0 125 6-153 39-194 (218)
76 1ktg_A Diadenosine tetraphosph 97.0 0.00093 3.2E-08 56.2 5.9 109 5-148 5-119 (138)
77 3i7u_A AP4A hydrolase; nudix p 97.0 0.0005 1.7E-08 58.5 3.9 96 16-148 14-113 (134)
78 1v8y_A ADP-ribose pyrophosphat 96.9 0.0019 6.5E-08 56.8 7.6 107 7-152 38-149 (170)
79 3gwy_A Putative CTP pyrophosph 96.8 0.002 6.7E-08 54.6 6.7 105 6-146 9-115 (140)
80 1vcd_A NDX1; nudix protein, di 96.6 0.004 1.4E-07 51.3 7.1 100 6-147 5-107 (126)
81 3grn_A MUTT related protein; s 96.5 0.0092 3.2E-07 51.2 8.9 105 6-146 11-118 (153)
82 1q27_A Putative nudix hydrolas 96.5 0.011 3.8E-07 51.6 9.5 112 7-153 38-154 (171)
83 3eds_A MUTT/nudix family prote 96.5 0.0016 5.4E-08 56.3 3.8 101 7-146 25-134 (153)
84 3shd_A Phosphatase NUDJ; nudix 96.5 0.0039 1.3E-07 53.4 6.3 93 16-144 15-112 (153)
85 2pbt_A AP4A hydrolase; nudix p 96.5 0.002 6.7E-08 53.8 4.3 102 6-147 7-112 (134)
86 2w4e_A MUTT/nudix family prote 96.5 0.0036 1.2E-07 53.5 5.8 101 17-152 17-122 (145)
87 1f3y_A Diadenosine 5',5'''-P1, 96.4 0.0023 7.8E-08 55.4 3.9 98 17-150 26-148 (165)
88 1rya_A GDP-mannose mannosyl hy 96.3 0.0099 3.4E-07 51.1 7.9 108 6-146 21-137 (160)
89 3o6z_A GDP-mannose pyrophospha 96.3 0.0041 1.4E-07 56.1 5.2 115 7-152 49-171 (191)
90 3son_A Hypothetical nudix hydr 96.2 0.0086 2.9E-07 51.0 6.9 95 16-148 19-125 (149)
91 4dyw_A MUTT/nudix family prote 96.2 0.0032 1.1E-07 54.6 4.2 103 6-145 32-139 (157)
92 2b0v_A Nudix hydrolase; struct 96.2 0.0051 1.7E-07 52.5 5.4 98 16-147 18-120 (153)
93 3exq_A Nudix family hydrolase; 96.2 0.0096 3.3E-07 51.8 7.1 103 7-144 14-118 (161)
94 1g0s_A Hypothetical 23.7 kDa p 96.2 0.0062 2.1E-07 55.8 5.9 114 8-152 62-184 (209)
95 2o1c_A DATP pyrophosphohydrola 96.1 0.0081 2.8E-07 50.8 6.0 107 6-147 12-132 (150)
96 2azw_A MUTT/nudix family prote 96.1 0.0066 2.3E-07 51.4 5.3 104 8-148 23-131 (148)
97 3q93_A 7,8-dihydro-8-oxoguanin 95.9 0.0063 2.2E-07 54.0 4.4 96 16-145 35-132 (176)
98 2yvp_A NDX2, MUTT/nudix family 95.9 0.0066 2.2E-07 53.9 4.5 102 16-152 52-159 (182)
99 3h95_A Nucleoside diphosphate- 95.9 0.014 4.7E-07 52.8 6.7 104 8-147 31-140 (199)
100 3id9_A MUTT/nudix family prote 95.6 0.011 3.6E-07 51.8 4.7 101 5-146 25-134 (171)
101 2rrk_A ORF135, CTP pyrophospho 95.6 0.019 6.3E-07 48.1 6.1 96 16-146 19-116 (140)
102 2jvb_A Protein PSU1, mRNA-deca 95.6 0.011 3.7E-07 50.2 4.5 105 7-151 8-118 (146)
103 2yyh_A MUTT domain, 8-OXO-DGTP 95.5 0.012 4.2E-07 49.4 4.7 103 6-145 12-119 (139)
104 2dsc_A ADP-sugar pyrophosphata 95.5 0.0086 2.9E-07 54.8 3.9 107 10-151 70-187 (212)
105 3ees_A Probable pyrophosphohyd 95.5 0.016 5.4E-07 49.2 5.3 96 16-146 32-129 (153)
106 3cng_A Nudix hydrolase; struct 95.5 0.0096 3.3E-07 53.4 4.1 99 6-145 43-144 (189)
107 1mk1_A ADPR pyrophosphatase; n 95.5 0.013 4.5E-07 53.4 5.0 103 16-152 54-163 (207)
108 2pqv_A MUTT/nudix family prote 95.4 0.0065 2.2E-07 52.1 2.5 100 6-146 22-128 (154)
109 1hzt_A Isopentenyl diphosphate 95.3 0.026 8.7E-07 50.4 6.2 115 7-152 36-155 (190)
110 1vhz_A ADP compounds hydrolase 95.2 0.0082 2.8E-07 54.5 2.6 100 18-152 61-165 (198)
111 3fk9_A Mutator MUTT protein; s 95.1 0.008 2.8E-07 54.0 2.2 93 16-144 14-111 (188)
112 2fvv_A Diphosphoinositol polyp 95.0 0.029 1E-06 50.6 5.6 97 16-152 53-155 (194)
113 3gg6_A Nudix motif 18, nucleos 94.9 0.02 6.9E-07 49.1 4.3 99 6-145 23-128 (156)
114 3r03_A Nudix hydrolase; struct 94.9 0.033 1.1E-06 46.8 5.4 105 7-146 12-118 (144)
115 1nqz_A COA pyrophosphatase (MU 94.9 0.036 1.2E-06 49.5 5.9 100 12-146 43-150 (194)
116 1mut_A MUTT, nucleoside tripho 94.8 0.015 5E-07 47.9 2.9 95 16-145 15-111 (129)
117 2a6t_A SPAC19A8.12; alpha/beta 94.8 0.011 3.9E-07 56.4 2.5 104 6-149 104-214 (271)
118 3fcm_A Hydrolase, nudix family 94.7 0.023 7.8E-07 51.2 4.1 105 7-149 49-169 (197)
119 3hhj_A Mutator MUTT protein; n 94.7 0.047 1.6E-06 46.8 6.0 104 7-145 33-138 (158)
120 3f6a_A Hydrolase, nudix family 94.3 0.03 1E-06 48.3 3.9 102 7-145 10-131 (159)
121 3fjy_A Probable MUTT1 protein; 94.2 0.033 1.1E-06 55.3 4.5 99 15-148 36-159 (364)
122 3i9x_A MUTT/nudix family prote 94.0 0.055 1.9E-06 48.1 5.1 104 16-146 45-154 (187)
123 2fml_A MUTT/nudix family prote 93.9 0.092 3.1E-06 50.0 6.8 99 16-146 55-156 (273)
124 3oga_A Nucleoside triphosphata 93.9 0.053 1.8E-06 46.9 4.6 100 16-146 38-148 (165)
125 2qjo_A Bifunctional NMN adenyl 93.4 0.12 4E-06 50.3 6.7 100 16-147 213-322 (341)
126 2kdv_A RNA pyrophosphohydrolas 93.4 0.03 1E-06 48.9 2.1 105 8-148 13-136 (164)
127 3q1p_A Phosphohydrolase (MUTT/ 93.3 0.04 1.4E-06 50.0 2.9 95 16-144 78-175 (205)
128 3gz5_A MUTT/nudix family prote 93.1 0.12 4E-06 48.3 5.8 97 16-144 36-136 (240)
129 3o8s_A Nudix hydrolase, ADP-ri 93.1 0.039 1.4E-06 50.1 2.5 93 17-144 81-176 (206)
130 1k2e_A Nudix homolog; nudix/MU 93.0 0.065 2.2E-06 46.0 3.7 96 7-145 5-117 (156)
131 2qjt_B Nicotinamide-nucleotide 92.6 0.15 5.1E-06 49.9 6.2 100 16-147 218-329 (352)
132 2fb1_A Conserved hypothetical 92.1 0.077 2.6E-06 49.0 3.1 95 16-144 27-125 (226)
133 2fkb_A Putative nudix hydrolas 91.9 0.48 1.6E-05 41.3 8.0 107 7-149 41-151 (180)
134 1x51_A A/G-specific adenine DN 91.8 0.38 1.3E-05 40.9 7.1 106 7-146 23-132 (155)
135 1vk6_A NADH pyrophosphatase; 1 91.7 0.1 3.5E-06 49.8 3.4 90 16-144 150-243 (269)
136 2b06_A MUTT/nudix family prote 89.9 0.16 5.5E-06 43.1 2.8 79 44-146 38-118 (155)
137 1q33_A Pyrophosphatase, ADP-ri 87.1 0.25 8.7E-06 47.5 2.3 96 16-145 138-260 (292)
138 3f13_A Putative nudix hydrolas 85.6 1.6 5.5E-05 37.7 6.6 81 16-140 26-108 (163)
139 3e57_A Uncharacterized protein 85.5 0.51 1.7E-05 43.3 3.4 112 16-151 78-192 (211)
140 3fsp_A A/G-specific adenine gl 84.9 0.94 3.2E-05 44.9 5.3 99 6-144 243-342 (369)
141 1u20_A U8 snoRNA-binding prote 80.1 1.4 4.6E-05 40.0 4.0 91 16-144 55-162 (212)
142 2xsq_A U8 snoRNA-decapping enz 78.9 1.5 5.1E-05 40.1 3.9 67 41-128 74-140 (217)
143 2pny_A Isopentenyl-diphosphate 72.3 17 0.00058 33.6 9.3 71 78-151 124-205 (246)
144 2dho_A Isopentenyl-diphosphate 69.7 17 0.00058 33.3 8.7 117 9-151 65-194 (235)
145 3dup_A MUTT/nudix family prote 25.2 63 0.0022 30.8 4.4 104 78-189 166-280 (300)
146 3rh7_A Hypothetical oxidoreduc 23.2 1.3E+02 0.0046 28.7 6.4 55 79-143 217-272 (321)
No 1
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.97 E-value=2e-30 Score=256.04 Aligned_cols=210 Identities=22% Similarity=0.299 Sum_probs=162.5
Q ss_pred cccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcH-HHHHHHHHHcCC----CccE
Q 013654 185 QEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEF-HEELLKVVASLP----RKLI 259 (439)
Q Consensus 185 ~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~-~~~l~~~~~~~~----~i~~ 259 (439)
+||+||||+++.+.+ .+....|+|+|..+ ++.+|||||.+... .+.+.+.+++.+ ++++
T Consensus 2 ~~v~~~v~~i~~~~p--~~~~~~n~~li~~~--------------~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~ 65 (317)
T 2zo4_A 2 KALLPGLYLLPVPIP--YPLKTVNLYLLQGA--------------GEVALVDTALGTRAARGALELHLAELGLCFQDVKT 65 (317)
T ss_dssp -CCBTTEEEEEEECS--STTCEEEEEEEEET--------------TEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCE
T ss_pred eeccCCeEEEEecCC--CCCCcEEEEEEEcC--------------CceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCE
Confidence 688999999987643 24456788888753 45899999998642 234445555443 4679
Q ss_pred EEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhcc------------------CC---------------------C
Q 013654 260 VFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGK------------------DD---------------------W 300 (439)
Q Consensus 260 VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~------------------~~---------------------~ 300 (439)
||+||.|+||+||+..|.+. +++||+++.+.+.+.. .. .
T Consensus 66 Vi~TH~H~DH~gg~~~l~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 143 (317)
T 2zo4_A 66 ILLTHHHPDHYGLSGFFEGL--GARVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHP 143 (317)
T ss_dssp EEESCCSHHHHTTHHHHHHT--TCEEEEEGGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCC
T ss_pred EEEcCCCCcccccHHHHHhC--CCEEEEcHHHHHHHHhhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCC
Confidence 99999999999999999886 8999999876443311 00 0
Q ss_pred CCCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEECCccEEEEccccccCcccccccC---CCCCHHHHHHHHHHHHc
Q 013654 301 SLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDIT---AGGNMTDYFQSTYKFLE 377 (439)
Q Consensus 301 ~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~~~~iLftGD~l~~~~~~~~~~~---~~~~~~~~~~sL~rL~~ 377 (439)
......+.+|+++.+||.+++++++||||+||+++++++.++||+||+++....+.+... ...+..+|++|+++|++
T Consensus 144 ~~~~~~~~~g~~l~~gg~~~~~i~tpGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~ 223 (317)
T 2zo4_A 144 PQNPLPLRDGEALEVAGKRLRVLWTPGHADGHAAFYLEEEGVLLAGDALLEKVSPNVGLWAYTRENPLKDFLRSLDRLAD 223 (317)
T ss_dssp CSSCEEECTTCEEEETTEEEEEEECCSSSTTCEEEEETTTTEEEEETSCCSSSCCCCCCCTTSCSCHHHHHHHHHHHHHT
T ss_pred CCCceEECCCCEEEeCCceEEEEECCCCCcccEEEEeCCCCEEEECCEecCCCCCCCcccCCCCCchHHHHHHHHHHHhc
Confidence 123567899999999999999999999999999999999999999999986654433211 23578999999999999
Q ss_pred CCCCEEEeCCCCCCCChHHHHHHHHHHHHhhhccc
Q 013654 378 LSPHALIPMHGRVNLWPKHMLCGYLKYERQLFLFF 412 (439)
Q Consensus 378 l~~~~IvPgHG~~~~~~~~~i~~~L~~~~~~~~~i 412 (439)
+++++++||||+++.++.+.+.++++++++..+.+
T Consensus 224 l~~~~v~pgHg~~~~~~~~~i~~~~~~~~~~~~~i 258 (317)
T 2zo4_A 224 LGARVAYAGHFGPIADVRQRAEELKAHHQARLEAL 258 (317)
T ss_dssp SCCSEEEESSSSCBSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEECCCCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888888777544433
No 2
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.97 E-value=5.2e-29 Score=243.23 Aligned_cols=213 Identities=23% Similarity=0.309 Sum_probs=165.5
Q ss_pred CCCccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCC--cHHHHHHHHHHcCC-Cc
Q 013654 181 TLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRS--EFHEELLKVVASLP-RK 257 (439)
Q Consensus 181 ~~~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~--~~~~~l~~~~~~~~-~i 257 (439)
.+...+++||+|.+....+...++..+|+|+|..+ ++.+|||||... ...+.+.+.+...+ ++
T Consensus 6 ~~~~~~v~~~v~~v~g~~p~p~~~~~~n~~li~~~--------------~~~ilID~G~~~~~~~~~~l~~~l~~~~~~i 71 (289)
T 4ad9_A 6 LQRVERLSNRVVRVLGCNPGPMTLQGTNTYLVGTG--------------PRRILIDTGEPAIPEYISCLKQALTEFNTAI 71 (289)
T ss_dssp CCSEEECSSSEEEEECSCCBTTTBTCCEEEEECSS--------------SSEEEECCCSTTCHHHHHHHHHHHHHTTCCE
T ss_pred CcchhccCCCeEEEeCCCCCCCcCCceEEEEEecC--------------CceEEEeCCCCCChHHHHHHHHHHHHcCCCc
Confidence 34568899999999765544344556788888653 569999999753 22344555555433 56
Q ss_pred cEEEeCCCchhhhcChHHHHHhC---CCCEEEeCHhHHHHhcc-CCCCCCceecCCCceEEECCeEEEEEeCCCCCCCCE
Q 013654 258 LIVFVTHHHRDHVDGLSIIQKCN---PDAILLAHENTMRRIGK-DDWSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHV 333 (439)
Q Consensus 258 ~~VilTH~H~DHigG~~~l~~~~---p~a~V~~~~~~~~~l~~-~~~~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~ 333 (439)
++||+||.|+||+||+..|.+.+ ++++++++......... ......+..+++|+++.+|+.+++++++||||+|++
T Consensus 72 ~~Ii~TH~H~DH~gg~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gg~~~~~~~~pGHt~~~~ 151 (289)
T 4ad9_A 72 QEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRNPQREEIIGNGEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHM 151 (289)
T ss_dssp EEEECSCSSHHHHTTHHHHHHHSCCSSCCCEEECCCSSCCCCCBTTTTBCEEECCTTCEEEETTEEEEEEECCSSSTTCE
T ss_pred eEEEEcCCCCcccccHHHHHHhhccCCCceEEecCCCcchhhhccCCCCceEEcCCCCEEEeCCeEEEEEECCCCCCCCE
Confidence 79999999999999999999987 57889987643211100 012235678999999999999999999999999999
Q ss_pred EEEECCccEEEEccccccCcccccccCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCCChHHHHHHHHHHHHhhhccc
Q 013654 334 ALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLELSPHALIPMHGRVNLWPKHMLCGYLKYERQLFLFF 412 (439)
Q Consensus 334 ~l~~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~~l~~~~IvPgHG~~~~~~~~~i~~~L~~~~~~~~~i 412 (439)
++++++.++||+||+++..+... ..++.+|++|++++..++++.++||||+++.++.+.+.+|++++++..+.+
T Consensus 152 ~~~~~~~~~lftGD~~~~~~~~~-----~~~~~~~~~sl~~l~~l~~~~v~pgHg~~~~~~~~~i~~~~~~~~~r~~~i 225 (289)
T 4ad9_A 152 ALLLEEENAIFSGDCILGEGTTV-----FEDLYDYMNSLKELLKIKADIIYPGHGPVIHNAEAKIQQYISHRNIREQQI 225 (289)
T ss_dssp EEEETTTTEEEEETSSCSSSCCC-----CSCHHHHHHHHHHHHHHTCSEEEESSSSCBSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCEEEEecccCCCCCcC-----cCCHHHHHHHHHHHHcCCCCEEEeCCCChhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987654332 248999999999999999999999999999988888999998887554433
No 3
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.96 E-value=4.9e-29 Score=233.02 Aligned_cols=197 Identities=16% Similarity=0.179 Sum_probs=156.5
Q ss_pred CCCCccc-cCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHc--CCC
Q 013654 180 PTLSYQE-YPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVAS--LPR 256 (439)
Q Consensus 180 ~~~~~~e-v~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~--~~~ 256 (439)
+.+.+++ +++|+|++.............|+|+|..+ ++.+|||||........+.+.+.. ..+
T Consensus 3 ~~~~~~~~l~~~v~~~~~~~~~~~~~~~~n~~li~~~--------------~~~iLiD~G~~~~~~~~~~~~l~~~~~~~ 68 (219)
T 3l6n_A 3 KDFVIEPPIKNNLHIYKTFGVFGGKEYSANSMYLVTK--------------KGVVLFDVPWEKVQYQSLMDTIKKRHNLP 68 (219)
T ss_dssp CCCEECCCBTTTEEEEEEEEEETTEEEEEEEEEEEET--------------TEEEEESCCSSGGGHHHHHHHHHHHHSCC
T ss_pred CccceEeeecCCEEEEEeccccCCccccceEEEEEeC--------------CEEEEEeCCCChHHHHHHHHHHHHhcCCc
Confidence 4567889 99999999654322122224577777553 568999999876433444444443 246
Q ss_pred ccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCCCceecCCCceEEECCeEEEEEe-CCCCCCCCEEE
Q 013654 257 KLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVVF-SPGHTDGHVAL 335 (439)
Q Consensus 257 i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~~~~~v~~g~~l~lGg~~l~vi~-tpGHt~g~~~l 335 (439)
+++||+||.|.||++|+..|.+ + +++||+++.+.+.+...........+++|+.+.+|+.++++++ +||||+|++++
T Consensus 69 i~~ii~TH~H~DH~gg~~~l~~-~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~ 146 (219)
T 3l6n_A 69 VVAVFATHSHDDRAGDLSFFNN-K-GIKTYATAKTNEFLKKDGKATSTEIIKTGKPYRIGGEEFVVDFLGEGHTADNVVV 146 (219)
T ss_dssp EEEEECSSSSTTTTCCTHHHHH-T-TCEEEECHHHHHHHHHTTCCCCSEECCTTSEEEETTEEEEEECCCCSSSSSCCEE
T ss_pred eeEEEecCCCcccccCHHHHHh-C-CCEEEEcHHHHHHHHhcCCCCCcEecCCCCEEEECCEEEEEEeCCCCCCCCCEEE
Confidence 7799999999999999999987 3 8999999999988876655566778999999999999999998 89999999999
Q ss_pred EECCccEEEEccccccCcccccccCCCCCHHHHHHHHHHHHcC--CCCEEEeCCCCCCC
Q 013654 336 LHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL--SPHALIPMHGRVNL 392 (439)
Q Consensus 336 ~~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~~l--~~~~IvPgHG~~~~ 392 (439)
++++.++||+||+++..+...+...+.++..+|++|++++..+ +.+.++||||++..
T Consensus 147 ~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~ 205 (219)
T 3l6n_A 147 WFPKYNVLDGGCLVKSNSATDLGYIKEANVEQWPKTINKLKAKYSKATLIIPGHDEWKG 205 (219)
T ss_dssp EETTTTEEEEETTSCCTTCSSCCCCTTCCTTTHHHHHHHHHHHCTTCSEEEESBSCCTT
T ss_pred EECCCCEEEECCeeeccccccccccCccCHHHHHHHHHHHHHhCCCCCEEECCCCCCCC
Confidence 9999999999999875554444444678899999999999885 56889999999775
No 4
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.96 E-value=5.9e-29 Score=233.68 Aligned_cols=206 Identities=14% Similarity=0.168 Sum_probs=154.1
Q ss_pred CccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHcC--CCccEE
Q 013654 183 SYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASL--PRKLIV 260 (439)
Q Consensus 183 ~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~--~~i~~V 260 (439)
.++++.+|||++....+........|+|+|..+ ++.+|||||.+......+.+.+++. .++++|
T Consensus 3 ~~~~i~~~v~~i~~~~~~~~~~~~~n~~li~~~--------------~~~iLiD~G~~~~~~~~~~~~l~~~~g~~i~~v 68 (223)
T 1m2x_A 3 KIEKLKDNLYVYTTYNTFNGTKYAANAVYLVTD--------------KGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMN 68 (223)
T ss_dssp EEEEEETTEEEEEEEEEETTEEEEEEEEEEEET--------------TEEEEESCCSSGGGHHHHHHHHHHHHCCCEEEE
T ss_pred eEEEeeCCEEEEEEeccCCCCcccccEEEEEeC--------------CEEEEEeCCCChhHHHHHHHHHHHHhCCCeEEE
Confidence 457899999998654221111123577777642 4589999998754333444444433 366799
Q ss_pred EeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCCCceecCCCceEEECCeEEEEEe-CCCCCCCCEEEEECC
Q 013654 261 FVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVVF-SPGHTDGHVALLHAS 339 (439)
Q Consensus 261 ilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~~~~~v~~g~~l~lGg~~l~vi~-tpGHt~g~~~l~~~~ 339 (439)
|+||.|+||++|+..+.+ ++++||+++.+.+.+...........+.+|+.+.+|+.++++++ +||||+|++++++++
T Consensus 69 i~TH~H~DH~gg~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~~~~~~~~~~ 146 (223)
T 1m2x_A 69 IATHSHDDRAGGLEYFGK--IGAKTYSTKMTDSILAKENKPRAQYTFDNNKSFKVGKSEFQVYYPGKGHTADNVVVWFPK 146 (223)
T ss_dssp ECSSSSTTTTTTHHHHHH--TTCEEEEEHHHHHHHHHTTCCCCSEEESSCEEEEETTEEEEEECCCSSSSSSCCEEEETT
T ss_pred EeccCCccccCchhhHhh--CCCeEEEcHHHHHHHHhcCccCCceecCCCceEEECCEEEEEEecCCCCCCCCEEEEECC
Confidence 999999999999999988 58999999999887765443344567899999999999999996 999999999999998
Q ss_pred ccEEEEccccccCcccccccCCCCCHHHHHHHHHHHHcC--CCCEEEeCCCCCCCChHHHHHHHHHHHH
Q 013654 340 TNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL--SPHALIPMHGRVNLWPKHMLCGYLKYER 406 (439)
Q Consensus 340 ~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~~l--~~~~IvPgHG~~~~~~~~~i~~~L~~~~ 406 (439)
.++||+||+++..+...+...+.++..+|.+|++++.++ +.+.++||||++.. .+.++.+.+..+
T Consensus 147 ~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~i~pgHg~~~~--~~~l~~~~~~l~ 213 (223)
T 1m2x_A 147 EKVLVGGCIIKSADSKDLGYIGEAYVNDWTQSVHNIQQKFSGAQYVVAGHDDWKD--QRSIQHTLDLIN 213 (223)
T ss_dssp TTEEEEETTSCCTTCSSCCCCTTCCHHHHHHHHHHHHHHTTTCSEEEESBSCCCS--TTHHHHHHHHHH
T ss_pred CCEEEEecccccCcccccccCCCCCHHHHHHHHHHHHHhCCCCCEEEeCCCCcCC--HHHHHHHHHHHH
Confidence 899999998765433333334668999999999999987 77899999999873 334444433333
No 5
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.96 E-value=9.4e-29 Score=238.63 Aligned_cols=219 Identities=13% Similarity=0.119 Sum_probs=152.4
Q ss_pred cCCCCCCCccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEe-cCCeEEEcCCCCCcHHHHHHHHHHc-
Q 013654 176 WKVPPTLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVA-QGEALIVDPGCRSEFHEELLKVVAS- 253 (439)
Q Consensus 176 ~~~~~~~~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi-~g~~vLID~G~~~~~~~~l~~~~~~- 253 (439)
|..+..+.+.||+||+|+++........|. +.|-+ ..+..+|+|++ +++.+|||||.... .+.+.+.+++
T Consensus 3 ~~~~~~~~~~~i~~~vy~v~~~~~~~~~f~--~~~~~-----~~g~~~N~yli~~~~~iLID~G~~~~-~~~~~~~l~~~ 74 (262)
T 3hnn_A 3 DSKPRDVQVLPIATNTKVLRARSWSRLRFE--IEYAL-----ERGTTSNSYVIEGDKTAIIDPPVESF-MKIYLEALQQT 74 (262)
T ss_dssp -CCSCEEEEEEEETTEEEEEEEESSCSSSS--GGGTT-----CCCEEEEEEEEESSSEEEECCCCHHH-HHHHHHHHHHH
T ss_pred CCccccceeEeecCCeEEEEEeeCCcccee--eeecc-----CCCcEEEEEEEECCCEEEEECCCcch-HHHHHHHHHHh
Confidence 345566778899999999975543211111 00000 01222233333 34589999998632 2233333332
Q ss_pred --CCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccC--CCCCCceecCCCceEEEC-CeEEEEEeCCC-
Q 013654 254 --LPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD--DWSLGYTSVSGSEDICVG-GQRLTVVFSPG- 327 (439)
Q Consensus 254 --~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~--~~~~~~~~v~~g~~l~lG-g~~l~vi~tpG- 327 (439)
..++++||+||.|+||+||+..+++++|+++||+++.+.+.+... ........+++|+++++| +.+++++++||
T Consensus 75 ~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~g~~l~lg~~~~~~~i~tpg~ 154 (262)
T 3hnn_A 75 VNLKKLDYVILGHFSPNRIPTFKALLELAPQITFVCSLPAAGDLRAAFPDDNLNILPMRGKETLDLGKGHVLKFLPIPSP 154 (262)
T ss_dssp SCGGGEEEEECSSCCGGGHHHHHHHHHHCTTCEEEECHHHHHHHHHHSSSSCCEEEECCSSCEEECSTTCEEEEEECCCS
T ss_pred CChhhCCEEEECCCCcchhchHHHHHHHCCCCEEEECHHHHHHHHHHhCCCCCceEEeCCCCEEEcCCCcEEEEEECCCC
Confidence 245679999999999999999999999999999999988776431 112346778999999998 89999999999
Q ss_pred CCCCCEEEEECCccEEEEccccccCcccc--ccc---------------CCCCCHHHHHHHHHHHHcCCCCEEEeCCCCC
Q 013654 328 HTDGHVALLHASTNSLIVGDHCVGQGSAV--LDI---------------TAGGNMTDYFQSTYKFLELSPHALIPMHGRV 390 (439)
Q Consensus 328 Ht~g~~~l~~~~~~iLftGD~l~~~~~~~--~~~---------------~~~~~~~~~~~sL~rL~~l~~~~IvPgHG~~ 390 (439)
||+|+++++.++.++||+||++....... +.. ....+..++.+++++++++++++|+||||++
T Consensus 155 Ht~g~~~~~~~~~~~lfsGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~L~~~~i~PgHG~~ 234 (262)
T 3hnn_A 155 RWPAGLCTYDVQTQILYTDKIFGAHICGDDVFDDNWESFKEDQRYYFNCLMAPHAIHVEAALEKISDLQVRLYAVGHGPL 234 (262)
T ss_dssp SCTTCEEEEETTTTEEEEETTTCCCCCCSCCEESCGGGTHHHHHHHHHHHTGGGHHHHHHHHHHHTTSCCSEEEESSSSE
T ss_pred CCCCeeEEEeCCCCEEEEeecCccccCchhcccccHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhCCCCCEEECCCCcc
Confidence 99999999999999999999954322211 100 0123457899999999999999999999998
Q ss_pred CC-ChHHHHHHHH
Q 013654 391 NL-WPKHMLCGYL 402 (439)
Q Consensus 391 ~~-~~~~~i~~~L 402 (439)
+. ++.+.++.|+
T Consensus 235 ~~~~~~~~~~~y~ 247 (262)
T 3hnn_A 235 VRTSLIALTQAYA 247 (262)
T ss_dssp ESTTHHHHHHHHH
T ss_pred ccCCHHHHHHHHH
Confidence 87 3344444443
No 6
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.96 E-value=1.7e-28 Score=232.15 Aligned_cols=196 Identities=15% Similarity=0.207 Sum_probs=150.0
Q ss_pred CCCCccccCCceEEEEcCCCCCCC--cccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHc--CC
Q 013654 180 PTLSYQEYPPGVILVPMQSRTAKP--FLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVAS--LP 255 (439)
Q Consensus 180 ~~~~~~ev~~Gv~~i~~~~~~~~p--~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~--~~ 255 (439)
..+..+++.+|+|++....+. .+ ....|+|+|..+ ++.+|||||.+......+.+.+++ ..
T Consensus 9 ~~~~~~~i~~~v~~i~~~~~~-~~~g~~~~n~~li~~~--------------~~~iLiD~G~~~~~~~~~~~~l~~~~~~ 73 (232)
T 1a7t_A 9 DDISITQLSDKVYTYVSLAEI-EGWGMVPSNGMIVINN--------------HQAALLDTPINDAQTEMLVNWVTDSLHA 73 (232)
T ss_dssp SSEEEEECSSSEEEEEEEEEE-TTTEEEEEEEEEEEET--------------TEEEEESCCSSHHHHHHHHHHHHHHHCC
T ss_pred CCeEEEEecCCeEEEEeccCC-CCCccccceEEEEEeC--------------CEEEEEeCCCCHHHHHHHHHHHHHhcCC
Confidence 355678999999999643211 11 112566666542 458999999874333334444443 33
Q ss_pred CccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCCCceecCCCceEEECCeEEEEEe-CCCCCCCCEE
Q 013654 256 RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVVF-SPGHTDGHVA 334 (439)
Q Consensus 256 ~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~~~~~v~~g~~l~lGg~~l~vi~-tpGHt~g~~~ 334 (439)
++++||+||.|+||+||+..+.+ ++++||+++.+.+.+...........+++|+.+.+|+.++++++ +||||+|+++
T Consensus 74 ~i~~ii~TH~H~DH~gg~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~ 151 (232)
T 1a7t_A 74 KVTTFIPNHWHGDCIGGLGYLQR--KGVQSYANQMTIDLAKEKGLPVPEHGFTDSLTVSLDGMPLQCYYLGGGHATDNIV 151 (232)
T ss_dssp EEEEEECSSSSHHHHTTHHHHHH--TTCEEEEEHHHHHHHHHHTCCCCSEEESSEEEEEETTEEEEEECCCCSSSTTCCE
T ss_pred CeEEEEeCCCCccccCCHHHHHh--CCCeEEEcHHHHHHHHhcCCCCCceecCCCCEEEECCeEEEEEeCCCCCCCCCEE
Confidence 56799999999999999999987 38999999998887755433345567889999999999999997 9999999999
Q ss_pred EEECCccEEEEccccccCcccccccCCCCCHHHHHHHHHHHHcC--CCCEEEeCCCCCCC
Q 013654 335 LLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL--SPHALIPMHGRVNL 392 (439)
Q Consensus 335 l~~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~~l--~~~~IvPgHG~~~~ 392 (439)
+++++.++||+||+++......+...+.++..+|++|+++++.+ +.+.++||||++..
T Consensus 152 ~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~ 211 (232)
T 1a7t_A 152 VWLPTENILFGGCMLKDNQTTSIGNISDADVTAWPKTLDKVKAKFPSARYVVPGHGNYGG 211 (232)
T ss_dssp EEETTTTEEEEETTSCCTTCCSCCCCTTCCTTTHHHHHHHHHHHCTTCSEEEESSSCCBC
T ss_pred EEECCCCEEEEcCcccccCCcccccCCCCCHHHHHHHHHHHHhhCCCCCEEECCCCCccc
Confidence 99998899999999875433333333567899999999999987 77899999999875
No 7
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.96 E-value=7.9e-29 Score=240.42 Aligned_cols=194 Identities=15% Similarity=0.184 Sum_probs=145.0
Q ss_pred CCCccccCCceEEEEcCCCCCCCcc--cccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHcC-C-C
Q 013654 181 TLSYQEYPPGVILVPMQSRTAKPFL--TTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASL-P-R 256 (439)
Q Consensus 181 ~~~~~ev~~Gv~~i~~~~~~~~p~~--~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~-~-~ 256 (439)
++.++|++||||.+.... ...+++ .+|+|+|.++ ++++|||||.+....+.+.+.+++. + .
T Consensus 48 ~~~~~~~~~~v~~~~~~~-~~~~~G~~~~N~ylv~~~--------------~~~ilIDtg~~~~~~~~l~~~i~~~~~~~ 112 (270)
T 4eyb_A 48 DLVFRQLAPNVWQHTSYL-DMPGFGAVASNGLIVRDG--------------GRVLVVDTAWTDDQTAQILNWIKQEINLP 112 (270)
T ss_dssp TEEEEEEETTEEEEEEEE-EETTTEEEEEEEEEEEET--------------TEEEEESCCSSHHHHHHHHHHHHHHTCCC
T ss_pred cceEEEecCCeEEEEeec-ccCCCCccceEEEEEEEC--------------CEEEEEeCCCCHHHHHHHHHHHHHhcCCc
Confidence 445788999999863211 112333 2677777653 5699999998876555666655543 2 4
Q ss_pred ccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCC--------CceecCCCceEEECCeEEEEEeCCCC
Q 013654 257 KLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSL--------GYTSVSGSEDICVGGQRLTVVFSPGH 328 (439)
Q Consensus 257 i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~--------~~~~v~~g~~l~lGg~~l~vi~tpGH 328 (439)
+++||+||.|+||+||+..|++. ++++|+++.+.+.+....... ....++++..+..|+. ..++.+|||
T Consensus 113 I~~Ii~TH~H~DH~gg~~~l~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~pgH 189 (270)
T 4eyb_A 113 VALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFGPL-KVFYPGPGH 189 (270)
T ss_dssp EEEEEECSSSHHHHTTHHHHHHT--TCEEEEEHHHHHHGGGGTCCCCSEEECBCTTSBBCGGGSTTCTTE-EEECCCSSS
T ss_pred eEEEEeCCCChhhcCcHHHHHHC--CCeEEECHHHHHHHHhcCccccccccCCCCceeecCceeeecCce-eEEeccccc
Confidence 56999999999999999999886 899999999988876543221 1223455555656653 234577999
Q ss_pred CCCCEEEEECCccEEEEccccccCcccccccCCCCCHHHHHHHHHHHHcC--CCCEEEeCCCCCCC
Q 013654 329 TDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL--SPHALIPMHGRVNL 392 (439)
Q Consensus 329 t~g~~~l~~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~~l--~~~~IvPgHG~~~~ 392 (439)
|+|++++++++.++||+||+++....+.+...++++..+|++||++++++ +.++|+||||++..
T Consensus 190 T~g~~~~~~~~~~vLfsGD~l~~~~~~~~~~~~~~~~~~~~~Sl~~l~~~~~d~~~v~PGHG~p~~ 255 (270)
T 4eyb_A 190 TSDNITVGIDGTDIAFGGCLIKDSKAKSLGNLGDADTEHYAASARAFGAAFPKASMIVMSHSAPDS 255 (270)
T ss_dssp SSSCCEEEETTSSEEECTTTCCCTTCSCCCCCTTCCTTTHHHHHHHHHHHSTTCCEEECSSSCCBC
T ss_pred CCCCEEEEecCCcEEEEeCeecCCCCCCcCCCCCCCHHHHHHHHHHHHhhCCCCcEEEcCCCCCCC
Confidence 99999999999999999999987777776666778999999999999874 55689999999764
No 8
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.96 E-value=3.6e-28 Score=228.92 Aligned_cols=198 Identities=18% Similarity=0.231 Sum_probs=149.2
Q ss_pred CCCCccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHc--CCCc
Q 013654 180 PTLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVAS--LPRK 257 (439)
Q Consensus 180 ~~~~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~--~~~i 257 (439)
..+..+++.+|+|++.............|+|++..+ ++.+|||||........+.+.+++ ..++
T Consensus 14 ~~~~~~~i~~~v~~~~~~~~~~~~~~~~n~~li~~~--------------~~~iliD~G~~~~~~~~~~~~l~~~~~~~i 79 (227)
T 1mqo_A 14 GTISISQLNKNVWVHTELGSFNGEAVPSNGLVLNTS--------------KGLVLVDSSWDDKLTKELIEMVEKKFQKRV 79 (227)
T ss_dssp SSEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEET--------------TEEEEESCCSSHHHHHHHHHHHHHHHTSCE
T ss_pred CcEEEEEecCCeEEEEeeecccCceecceEEEEEeC--------------CeEEEEECCCChHHHHHHHHHHHHhcCCCc
Confidence 455678999999998532110001113566666542 558999999885422333333333 4567
Q ss_pred cEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCCCceecCCCceEEECCeEEEEE-eCCCCCCCCEEEE
Q 013654 258 LIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVV-FSPGHTDGHVALL 336 (439)
Q Consensus 258 ~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~~~~~v~~g~~l~lGg~~l~vi-~tpGHt~g~~~l~ 336 (439)
++|++||.|+||++|+..+.+. +++||+++.+.+.+....+......+.+|+.+.+|+.+++++ ++||||+|+++++
T Consensus 80 ~~ii~TH~H~DH~gg~~~l~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~pgHt~g~~~~~ 157 (227)
T 1mqo_A 80 TDVIITHAHADRIGGIKTLKER--GIKAHSTALTAELAKKNGYEEPLGDLQTVTNLKFGNMKVETFYPGKGHTEDNIVVW 157 (227)
T ss_dssp EEEECCCCSHHHHTTHHHHHHH--TCEEECBHHHHHHHHHTTCCCCCCCBCSEEEEEETTEEEEEECCCCSSSSSCCEEE
T ss_pred eEEEeCCCCchhccchHHHhhC--CcEEEeccchHHHHHhcCCCCCccccCCCCeeeECCEEEEEEecCCCCCCCCEEEE
Confidence 8999999999999999999887 799999998887765443333445678889999999999998 6999999999999
Q ss_pred ECCccEEEEccccccCcccccccCCCCCHHHHHHHHHHHHcC--CCCEEEeCCCCCCCC
Q 013654 337 HASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL--SPHALIPMHGRVNLW 393 (439)
Q Consensus 337 ~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~~l--~~~~IvPgHG~~~~~ 393 (439)
+++.++||+||+++....+.+...+.++..+|.+|+++++++ +.+.|+||||++...
T Consensus 158 ~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~i~pgHg~~~~~ 216 (227)
T 1mqo_A 158 LPQYNILVGGCLVKSTSAKDLGNVADAYVNEWSTSIENVLKRYRNINAVVPGHGEVGDK 216 (227)
T ss_dssp ETTTTEEEEETTSCCTTCCSCCCCTTCCHHHHHHHHHHHHHHCCSCSEEEESSSCCBCT
T ss_pred ECCCCEEEEeeeeeccCccccCcCCCCCHHHHHHHHHHHHHhcCCCCEEEcCCCCcccc
Confidence 998899999999875443334334567899999999999886 778999999998763
No 9
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.96 E-value=1.2e-27 Score=227.51 Aligned_cols=203 Identities=18% Similarity=0.222 Sum_probs=149.0
Q ss_pred CCCCCccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHcC-C-C
Q 013654 179 PPTLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASL-P-R 256 (439)
Q Consensus 179 ~~~~~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~-~-~ 256 (439)
+..+.++++++|+|++.... ++ ..|+|++..++ ++.+|||||......+.+.+.+++. + .
T Consensus 7 ~~~~~~~~i~~~v~~i~~~~----~~-~~n~~li~~~~-------------~~~iLiD~G~~~~~~~~l~~~l~~~~~~~ 68 (246)
T 2fhx_A 7 PYNLTATKIDSDVFVVTDRD----FY-SSNVLVAKMLD-------------GTVVIVSSPFENLGTQTLMDWVAKTMKPK 68 (246)
T ss_dssp STTEEEEEEETTEEEEEETT----TT-TEEEEEEECTT-------------SEEEEESCCSSHHHHHHHHHHHHHHHCCS
T ss_pred CCCceEEEecCCEEEEECcC----CC-CCCEEEEEeCC-------------CeEEEEeCCCCHHHHHHHHHHHHHhcCCC
Confidence 34566789999999997542 22 35777775421 3489999998753333444433322 2 2
Q ss_pred ccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccC-------------------------CCCC-CceecCCC
Q 013654 257 KLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-------------------------DWSL-GYTSVSGS 310 (439)
Q Consensus 257 i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~-------------------------~~~~-~~~~v~~g 310 (439)
..+||+||.|+||+||+..+.+ + +++||+++.+.+.+... .... ....+++|
T Consensus 69 ~~~vi~TH~H~DH~gg~~~l~~-~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 146 (246)
T 2fhx_A 69 KVVAINTHFHLDGTGGNEIYKK-M-GAETWSSDLTKQLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQG 146 (246)
T ss_dssp EEEEECCSSSHHHHTTHHHHHH-T-TCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTC
T ss_pred cEEEEeCCCCccccChHHHHhh-c-CCEEEEcHHHHHHHHhcchhhhHHHHhhhccccchhhhcccccCCCCceeecCCC
Confidence 2279999999999999999987 4 89999998876654210 0111 12357899
Q ss_pred ceEEECCeEEEEEe-CCCCCCCCEEEEECCccEEEEccccccCcccccccCCCCCHHHHHHHHHHHHcCCCCEEEeCCCC
Q 013654 311 EDICVGGQRLTVVF-SPGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLELSPHALIPMHGR 389 (439)
Q Consensus 311 ~~l~lGg~~l~vi~-tpGHt~g~~~l~~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~~l~~~~IvPgHG~ 389 (439)
+++++|+.++++++ +||||+|++++++++.++||+||+++....+ ..+.++..+|++|+++|++++.+.++||||+
T Consensus 147 ~~l~~g~~~i~~~~~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~---~~~~~~~~~~~~sl~~l~~l~~~~i~pgHg~ 223 (246)
T 2fhx_A 147 KVFSFSNELVEVSFPGPAHSPDNVVVYFPKKKLLFGGCMIKPKELG---YLGDANVKAWPDSARRLKKFDAKIVIPGHGE 223 (246)
T ss_dssp EEEEETTEEEEEECCCCSSSTTCCEEEETTTTEEEEETTCCSSCCC---CCTTCCTTTHHHHHHHGGGSCCSEEEESBSC
T ss_pred CEEEECCEEEEEEeCCCCCCCCCEEEEEcCCCEEEECCEeccCCCC---CCCCCCHHHHHHHHHHHHhCCCCEEECCCCC
Confidence 99999999999995 9999999999999989999999998754332 2356689999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHH
Q 013654 390 VNLWPKHMLCGYLKYER 406 (439)
Q Consensus 390 ~~~~~~~~i~~~L~~~~ 406 (439)
+.. .+.+.++++..+
T Consensus 224 ~~~--~~~l~~~~~~l~ 238 (246)
T 2fhx_A 224 WGG--PEMVNKTIKVAE 238 (246)
T ss_dssp CBS--THHHHHHHHHHH
T ss_pred cCC--HHHHHHHHHHHH
Confidence 876 344444444443
No 10
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.95 E-value=1.4e-27 Score=223.84 Aligned_cols=197 Identities=17% Similarity=0.212 Sum_probs=149.0
Q ss_pred CCccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHcCC--CccE
Q 013654 182 LSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLP--RKLI 259 (439)
Q Consensus 182 ~~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~~--~i~~ 259 (439)
+.++++.+|+|+++.. .+...|+|+|..+ ++.+|||||.+....+.+.+.+++++ ++++
T Consensus 3 ~~~~~l~~~v~~~~~~-----~~~~~n~~li~~~--------------~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ 63 (227)
T 3iog_A 3 MSLTQVSGPVYVVEDN-----YYVQENSMVYFGA--------------KGVTVVGATWTPDTARELHKLIKRVSRKPVLE 63 (227)
T ss_dssp EEEEEEETTEEEEEEC-----SSSCEEEEEEECS--------------SCEEEESCCSSHHHHHHHHHHHHTTCCSCEEE
T ss_pred cccEEecCCEEEEECC-----CcccCcEEEEEeC--------------CeEEEEECCCChHHHHHHHHHHHHhcCCCeEE
Confidence 5678899999999632 2345688888653 56899999987655566777776643 5669
Q ss_pred EEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccC-------------C-----CCCCceecCCCceEEECCeEEE
Q 013654 260 VFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-------------D-----WSLGYTSVSGSEDICVGGQRLT 321 (439)
Q Consensus 260 VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~-------------~-----~~~~~~~v~~g~~l~lGg~~l~ 321 (439)
||+||.|+||+||+..|++ ++++||+++.+...+... . .......+ ++ .+.+++.+++
T Consensus 64 ii~TH~H~DH~gg~~~l~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~l~~~~~~ 139 (227)
T 3iog_A 64 VINTNYHTDRAGGNAYWKS--IGAKVVSTRQTRDLMKSDWAEIVAFTRKGLPEYPDLPLVLPNVVH-DG-DFTLQEGKVR 139 (227)
T ss_dssp EECSSSSHHHHTTHHHHHH--TTCEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSCCCCCCCCSEEE-SS-CEEETTTTEE
T ss_pred EEeCCCchhhcChHHHHhh--CCCeEEECHHHHHHHHHhhHHHHHHhhcCCCCCCCccccCCCEee-cC-eEEEcCcEEE
Confidence 9999999999999999986 599999999887655321 0 11112223 34 4788888899
Q ss_pred EEeC-CCCCCCCEEEEECCccEEEEccccccCcccccccCCCCCHHHHHHHHHHHH--cCCCCEEEeCCCCCCCChHHHH
Q 013654 322 VVFS-PGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFL--ELSPHALIPMHGRVNLWPKHML 398 (439)
Q Consensus 322 vi~t-pGHt~g~~~l~~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~--~l~~~~IvPgHG~~~~~~~~~i 398 (439)
++++ ||||+|++++++++.++|| ||.++....+.+ ..++..+|++|+++|+ .+++++|+||||+++..+ +.+
T Consensus 140 ~~~~~pGHt~g~~~~~~~~~~~lf-gd~l~~~~~~~~---~~~~~~~~~~sl~~l~~~~l~~~~i~pgHg~~~~~~-~~i 214 (227)
T 3iog_A 140 AFYAGPAHTPDGIFVYFPDEQVLY-GGCILKEKLGNL---SFADVKAYPQTLERLKAMKLPIKTVIGGHDSPLHGP-ELI 214 (227)
T ss_dssp EECCCCSSSSSCCEEEETTTTEEE-CGGGSCSSCCCC---TTCCTTHHHHHHHHHHHTCCCCSEEECSSSCCEECT-HHH
T ss_pred EEecCCCCCCCcEEEEecCCCEEE-cccccccCCCCc---CcCCHHHHHHHHHHHHhccCCCCEEEeCCCCCcCCH-HHH
Confidence 9997 9999999999999999999 888876554443 4468899999999999 688999999999987754 444
Q ss_pred HHHHHHHH
Q 013654 399 CGYLKYER 406 (439)
Q Consensus 399 ~~~L~~~~ 406 (439)
+.+++..+
T Consensus 215 ~~~~~~~~ 222 (227)
T 3iog_A 215 DHYEALIK 222 (227)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 45444443
No 11
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.95 E-value=5.9e-28 Score=229.77 Aligned_cols=205 Identities=14% Similarity=0.182 Sum_probs=151.4
Q ss_pred CCCCccccCCceEEEEcCCCCCC-CcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHcC--CC
Q 013654 180 PTLSYQEYPPGVILVPMQSRTAK-PFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASL--PR 256 (439)
Q Consensus 180 ~~~~~~ev~~Gv~~i~~~~~~~~-p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~--~~ 256 (439)
..+.++++++|+|++........ .....|+|++..+ ++.+|||||........+.+.+++. .+
T Consensus 20 ~~~~~~~i~~~v~~~~~~~~~~~~g~~~~n~~li~~~--------------~~~iLID~G~~~~~~~~l~~~l~~~~~~~ 85 (243)
T 4hl2_A 20 GDLVFRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDG--------------GRVLVVDTAWTDDQTAQILNWIKQEINLP 85 (243)
T ss_dssp TTEEEEEEETTEEEEEEEEEETTTEEEEEEEEEEEET--------------TEEEEESCCSSHHHHHHHHHHHHHHTCCC
T ss_pred cceEEEEeCCceEEEeeecccCCCCcccceEEEEEEC--------------CcEEEEECCCCCccHHHHHHHHHHhhCCC
Confidence 35678899999999853211111 2234577777553 4589999997654444555555543 25
Q ss_pred ccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCC--------CceecCCCceEEECCeEEEEEeCCCC
Q 013654 257 KLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSL--------GYTSVSGSEDICVGGQRLTVVFSPGH 328 (439)
Q Consensus 257 i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~--------~~~~v~~g~~l~lGg~~l~vi~tpGH 328 (439)
+++||+||.|+||+||+..|.+. +++||+++.+.+.+....... ....+++|+.+.+|+.++ ++++|||
T Consensus 86 i~~vi~TH~H~DH~gg~~~l~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v-~~~~pGH 162 (243)
T 4hl2_A 86 VALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFGPLKV-FYPGPGH 162 (243)
T ss_dssp EEEEEECSSSHHHHTTHHHHHHT--TCEEEEEHHHHHHGGGTTCCCCSEEECBCTTSBBCGGGSTTCTTEEE-ECCCSSS
T ss_pred eeEEEECCCCccccCCHHHHHhC--CCeEEECHHHHHHHhcccccccccccccccceEecCCCeEEECCEEE-EeCCCCC
Confidence 67999999999999999999885 899999999988876543221 123467899999999887 6789999
Q ss_pred CCCCEEEEECCccEEEEccccccCcccccccCCCCCHHHHHHHHHHHHc-C-CCCEEEeCCCCCCCChHHHHHHHHH
Q 013654 329 TDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLE-L-SPHALIPMHGRVNLWPKHMLCGYLK 403 (439)
Q Consensus 329 t~g~~~l~~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~~-l-~~~~IvPgHG~~~~~~~~~i~~~L~ 403 (439)
|+|++++++++.++||+||+++..........+.++..+|++|++++.. + +...|+||||++.. .+.++.+.+
T Consensus 163 t~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~~l~~~~~v~pgHg~~~~--~~~i~~~~~ 237 (243)
T 4hl2_A 163 TSDNITVGIDGTDIAFGGCLIKDSKAKSLGNLGDADTEHYAASARAFGAAFPKASMIVMSHSAPDS--RAAITHTAR 237 (243)
T ss_dssp STTCCEEEETTTTEEECTTTCCCTTCSCCCCCTTCCTTTHHHHHHHHHHHSTTCCEEECSSSCCBC--THHHHHHHH
T ss_pred CcCCEEEEEcCCCEEEEcceeeeccCCCcCCCCCCCHHHHHHHHHHHHhhCCCceEEEeCCCCcCc--HHHHHHHHH
Confidence 9999999999899999999988543333433467889999999999985 5 56789999999876 444444433
No 12
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.95 E-value=1.8e-27 Score=233.95 Aligned_cols=198 Identities=21% Similarity=0.260 Sum_probs=147.2
Q ss_pred CccccCCceEEEEcCCCCCCCcccccEEEE-ccCCCCCCCCceEEEecCCeEEEcCCCCCc---HHHHHHHHHHcCCCcc
Q 013654 183 SYQEYPPGVILVPMQSRTAKPFLTTNLIVF-APDSVSDDCGNHRFVAQGEALIVDPGCRSE---FHEELLKVVASLPRKL 258 (439)
Q Consensus 183 ~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i-~~~~g~~~~~~s~~vi~g~~vLID~G~~~~---~~~~l~~~~~~~~~i~ 258 (439)
..+++.+|+|++. ....|+|++ ..+ ++.+|||||.+.. ..+.+.+.+....+++
T Consensus 8 ~~~~v~~~v~~ig--------~~~~n~~li~~~~--------------~~~iLID~G~~~~~~~~~~~l~~~~~~~~~i~ 65 (303)
T 2vw8_A 8 APGQLDDDLCLLG--------DVQVPVFLLRLGE--------------ASWALVEGGISRDAELVWADLCRWVADPSQVH 65 (303)
T ss_dssp SSEEEETTEEEES--------CTTSCEEEEEEET--------------TEEEEECCCCGGGHHHHHHHHHHHCSCGGGEE
T ss_pred CceeecCCeEEec--------CCCceEEEEEeCC--------------CceEEEECCCCCcHHHHHHHHHHHhcCcccce
Confidence 4578899999982 224677777 242 5589999998642 2233333311223567
Q ss_pred EEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccC---------------CC----------CCCceecCCCceE
Q 013654 259 IVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD---------------DW----------SLGYTSVSGSEDI 313 (439)
Q Consensus 259 ~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~---------------~~----------~~~~~~v~~g~~l 313 (439)
+||+||.|+||+||+..+++.+|+++||+++.+.+.+... .+ ......+.+|+.+
T Consensus 66 ~Ii~TH~H~DH~gg~~~l~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 145 (303)
T 2vw8_A 66 YWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWL 145 (303)
T ss_dssp EEECCCCSTTTTTTHHHHGGGCTTCEEEEEHHHHHHTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEE
T ss_pred EEEeccCCccccCCHHHHHHhCCCCeEEECHHHHHHHhccchhhHHHHHHHHHHHhhcccccccCCCCCCceEcCCCCEE
Confidence 9999999999999999999999999999999887655321 00 1233567899999
Q ss_pred EECC-eEEEEEeCCCCCCCCEEEEECCccEEEEccccccCcc--cccccCCCCCHHHHHHHHHHHHcCCCC-EEEeCCCC
Q 013654 314 CVGG-QRLTVVFSPGHTDGHVALLHASTNSLIVGDHCVGQGS--AVLDITAGGNMTDYFQSTYKFLELSPH-ALIPMHGR 389 (439)
Q Consensus 314 ~lGg-~~l~vi~tpGHt~g~~~l~~~~~~iLftGD~l~~~~~--~~~~~~~~~~~~~~~~sL~rL~~l~~~-~IvPgHG~ 389 (439)
++|+ .+++++++||||+|++++++++.++||+||++..... .........+..+|++|++++.+++++ +++||||+
T Consensus 146 ~lg~g~~l~~i~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~~v~pgHg~ 225 (303)
T 2vw8_A 146 ELGPRHRLQVIEAHGHSDDHVVFYDVRRRRLFCGDALGEFDEAEGVWRPLVFDDMEAYLESLERLQRLPTLLQLIPGHGG 225 (303)
T ss_dssp EEETTEEEEEEECTTSSTTCEEEEETTTTEEEEETTTCEECTTTCSEECCCSSCHHHHHHHHHHHHTSSCCSEEEESSSC
T ss_pred ecCCCeEEEEEECCCCCcccEEEEECCCCEEEEcCccCcccCcccccCCCCCCCHHHHHHHHHHHhcCCCCeEEECCCCC
Confidence 9987 9999999999999999999998999999999742211 111111357999999999999999999 99999999
Q ss_pred CCCChHHHHHHHHHH
Q 013654 390 VNLWPKHMLCGYLKY 404 (439)
Q Consensus 390 ~~~~~~~~i~~~L~~ 404 (439)
+... +.+.+++++
T Consensus 226 ~~~~--~~~~~~l~~ 238 (303)
T 2vw8_A 226 LLRG--RLAADGAES 238 (303)
T ss_dssp EEEH--HHHHTHHHH
T ss_pred ccCc--hHHHHHHHH
Confidence 7753 344455554
No 13
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.95 E-value=1.8e-27 Score=230.08 Aligned_cols=196 Identities=14% Similarity=0.156 Sum_probs=144.0
Q ss_pred CCCCCccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHcC-C-C
Q 013654 179 PPTLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASL-P-R 256 (439)
Q Consensus 179 ~~~~~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~-~-~ 256 (439)
...+.++++.+|+|.++...+........|+|+|..+ ++.+|||||.+......+.+.+++. + +
T Consensus 40 ~g~~~~~~l~dgv~~~~~~~~~~~~~~~~n~~li~~~--------------~~~iLID~G~~~~~~~~l~~~l~~~~g~~ 105 (265)
T 2y8b_A 40 VGEVRLYKIGDGVWSHIATQKLGDTVYSSNGLIVRDA--------------DELLLIDTAWGAKNTVALLAEIEKQIGLP 105 (265)
T ss_dssp TTCCEEEEEETTEEEEEEEEEETTEEEEEEEEEEEET--------------TEEEEESCCSSHHHHHHHHHHHHHHTCSC
T ss_pred cCCceEEEecCCeEEEeccccCCCCcccceEEEEEEC--------------CeEEEEeCCCCHHHHHHHHHHHHHhcCCC
Confidence 3466778899999998542211111223566666542 4589999998744334444444443 3 5
Q ss_pred ccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCCCcee----cCCCceEEECCeEEEE-EeCCCCCCC
Q 013654 257 KLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTS----VSGSEDICVGGQRLTV-VFSPGHTDG 331 (439)
Q Consensus 257 i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~~~~~----v~~g~~l~lGg~~l~v-i~tpGHt~g 331 (439)
+++|++||.|+||+||+..+.+. +++||+++.+.+.+........... .++|+.+.+|+ +++ +++||||+|
T Consensus 106 i~~VilTH~H~DH~gg~~~~~~~--~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~v~~~~pGHt~g 181 (265)
T 2y8b_A 106 VTRSISTHFHDDRVGGVDVLRAA--GVATYTSPLTRQLAEAAGNEVPAHSLKALSSSGDVVRFGP--VEVFYPGAAHSGD 181 (265)
T ss_dssp EEEEECSSSSHHHHTTHHHHHHT--TCEEEECHHHHHHHHHTTCCCCSEECSSCSSTTEEEEETT--EEEEECCSSSSTT
T ss_pred eEEEEeCCCChhhcCCHHHHhhC--CCeEEECHHHHHHHHhcccccccccccccCCCCcEEeecC--EEEEecCCCCCCC
Confidence 67999999999999999998873 8999999999887754321111122 36788888887 666 789999999
Q ss_pred CEEEEECCccEEEEccccccCcccccccCCCCCHHHHHHHHHHHHcC--CCCEEEeCCCCCCC
Q 013654 332 HVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL--SPHALIPMHGRVNL 392 (439)
Q Consensus 332 ~~~l~~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~~l--~~~~IvPgHG~~~~ 392 (439)
|+++++++.++||+||+++....+.+.....++.++|.+|++++.++ +.+.++||||++..
T Consensus 182 ~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~ 244 (265)
T 2y8b_A 182 NLVVYVPAVRVLFGGCAVHEASRESAGNVADANLAEWPATIKRIQQRYPEAEVVIPGHGLPGG 244 (265)
T ss_dssp CCEEEETTTTEEEEETTSCCTTCCSCCCCTTCCTTTHHHHHHHHHHHCTTCSEEEESSSCCBC
T ss_pred CEEEEecCCCEEEEccccccCCCcccCcCCcCCHHHHHHHHHHHHhhCCCCCEEECCCCCCCC
Confidence 99999998899999999876533333333457889999999999987 67889999999875
No 14
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.95 E-value=2e-27 Score=223.73 Aligned_cols=198 Identities=18% Similarity=0.186 Sum_probs=148.6
Q ss_pred CCCccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHc--CCCcc
Q 013654 181 TLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVAS--LPRKL 258 (439)
Q Consensus 181 ~~~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~--~~~i~ 258 (439)
.+.++++++|+|+++.. .+...|+|++..+ ++.+|||||.+....+.+.+.+++ ..+++
T Consensus 5 ~~~~~~l~~~v~~i~~~-----~~~~~n~~li~~~--------------~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~ 65 (233)
T 3q6v_A 5 NLTLTHFKGPLYIVEDK-----EYVQENSMVYIGT--------------DGITIIGATWTPETAETLYKEIRKVSPLPIN 65 (233)
T ss_dssp CEEEEEEETTEEEEEEC-----SSSCEEEEEEECS--------------SCEEEESCCSSHHHHHHHHHHHHHHCCCCEE
T ss_pred cceeEEecCCEEEEeCC-----CcCCCcEEEEEeC--------------CeEEEEECCCCHHHHHHHHHHHHHhcCCCcE
Confidence 45678899999999632 3445678877653 568999999986545555555554 34667
Q ss_pred EEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccC------------------CCCCCceecCCCceEEECCeEE
Q 013654 259 IVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD------------------DWSLGYTSVSGSEDICVGGQRL 320 (439)
Q Consensus 259 ~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~------------------~~~~~~~~v~~g~~l~lGg~~l 320 (439)
+||+||.|+||+||+..|++ ++++||+++.+.+.+... ........+.++..+..+ .+
T Consensus 66 ~ii~TH~H~DH~gg~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 141 (233)
T 3q6v_A 66 EVINTNYHTDRAGGNAYWKT--LGAKIVATQMTYDLQKSQWGSIVNFTRQGNNKYPNLEKSLPDTVFPGDFNLQNG--SI 141 (233)
T ss_dssp EEECSSSSHHHHTTHHHHHH--TTCEEEEEHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCCCCSEEESSCEEETTT--TE
T ss_pred EEEECCCChhhhChHHHHhh--CCCEEEEcHHHHHHHHhhhHHHHHHHhccccccccccccCCCEEeCCCeEEcCc--eE
Confidence 99999999999999999984 599999999887655321 111233456666555433 58
Q ss_pred EEEeC-CCCCCCCEEEEECCccEEEEccccccCcccccccCCCCCHHHHHHHHHHHHcC------CCCEEEeCCCCCCCC
Q 013654 321 TVVFS-PGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL------SPHALIPMHGRVNLW 393 (439)
Q Consensus 321 ~vi~t-pGHt~g~~~l~~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~~l------~~~~IvPgHG~~~~~ 393 (439)
+++++ ||||+|++++++++.++|| ||+++....+. .+.++..+|.+|+++|+++ ++++|+||||+++..
T Consensus 142 ~v~~~~pGHt~g~~~~~~~~~~~lf-gD~~~~~~~~~---~~~~~~~~~~~sl~~l~~l~~~~~~~~~~i~pgHg~~~~~ 217 (233)
T 3q6v_A 142 RAMYLGEAHTKDGIFVYFPAERVLY-GNCILKENLGN---MSFANRTEYPKTLEKLKGLIEQGELKVDSIIAGHDTPIHD 217 (233)
T ss_dssp EEECCCCSSSSSCCEEEETTTTEEE-CTTTSCSSCCC---CTTCCTTHHHHHHHHHHHHHHTTSSCCSEEECSSSSSEEC
T ss_pred EEEECCCCCCcCcEEEEeccCCEEE-CceeccccCCC---CCcCCHHHHHHHHHHHHHhhhcccCCCeEEECCCCCccCC
Confidence 89998 9999999999999999999 99987664443 3567899999999999999 899999999998764
Q ss_pred hHHHHHHHHHHHH
Q 013654 394 PKHMLCGYLKYER 406 (439)
Q Consensus 394 ~~~~i~~~L~~~~ 406 (439)
+. .+..+++..+
T Consensus 218 ~~-~i~~~~~~l~ 229 (233)
T 3q6v_A 218 VG-LIDHYLTLLE 229 (233)
T ss_dssp TH-HHHHHHHHHH
T ss_pred HH-HHHHHHHHHH
Confidence 43 4445544443
No 15
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.95 E-value=3.6e-27 Score=222.54 Aligned_cols=194 Identities=18% Similarity=0.195 Sum_probs=144.9
Q ss_pred CCCCccccCCceEEEEcCCCCCC-CcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHcCC-Cc
Q 013654 180 PTLSYQEYPPGVILVPMQSRTAK-PFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLP-RK 257 (439)
Q Consensus 180 ~~~~~~ev~~Gv~~i~~~~~~~~-p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~~-~i 257 (439)
..+.+.++.+|+|++....+... .....|+|++..+ ++.+|||||......+.+.+.+++.+ ++
T Consensus 5 ~~~~~~~i~~~v~~~~~~~~~~g~~~~~~n~~li~~~--------------~~~iliD~g~~~~~~~~~~~~l~~~g~~i 70 (228)
T 1jjt_A 5 PDLKIEKLDEGVYVHTSFEEVNGWGVVPKHGLVVLVN--------------AEAYLIDTPFTAKDTEKLVTWFVERGYKI 70 (228)
T ss_dssp CCCEEEEEETTEEEEEEEEECTTSCEEEEEEEEEEET--------------TEEEEESCCSSHHHHHHHHHHHHTTTCEE
T ss_pred CCceEEEecCCeEEEEeecccCCCccccceEEEEEEC--------------CcEEEEeCCCChhhHHHHHHHHHHcCCCe
Confidence 34567889999999964311000 1123466666542 45899999987544455566666554 45
Q ss_pred cEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCCCceecCCCceEEECCeEEEEE-eCCCCCCCCEEEE
Q 013654 258 LIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVV-FSPGHTDGHVALL 336 (439)
Q Consensus 258 ~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~~~~~v~~g~~l~lGg~~l~vi-~tpGHt~g~~~l~ 336 (439)
++||+||.|+||+||+..+.+. +++||+++.+.+.+...........+ .|+.+.+++.+++++ ++||||+|+++++
T Consensus 71 ~~ii~TH~H~DH~gg~~~l~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~-~g~~~~l~~~~i~~~~~~pGHt~g~~~~~ 147 (228)
T 1jjt_A 71 KGSISSHFHSDSTGGIEWLNSR--SIPTYASELTNELLKKDGKVQATNSF-SGVNYWLVKNKIEVFYPGPGHTPDNVVVW 147 (228)
T ss_dssp EEEECSSSSHHHHTTHHHHHHT--TCCEEEEHHHHHHHHHTTCCCCSEEE-CSSCCEEETTTEEEECCCCSSSTTCCEEE
T ss_pred eEEEeCCCChhhhccHHHHHhC--CCEEEEChHHHHHHHhcCCcCccccc-cCcceEecCceEEEEecCCCCCCCcEEEE
Confidence 6999999999999999999873 89999999998877543322222233 366778888889998 8999999999999
Q ss_pred ECCccEEEEccccccCcccccccCCCCCHHHHHHHHHHHHcC--CCCEEEeCCCCCCCC
Q 013654 337 HASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLEL--SPHALIPMHGRVNLW 393 (439)
Q Consensus 337 ~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~~l--~~~~IvPgHG~~~~~ 393 (439)
+++.++||+||+++....+.+ +..+..+|++|+++++++ +.+.++||||++...
T Consensus 148 ~~~~~~lf~GD~~~~~~~~~~---~~~d~~~~~~sl~~l~~~~~~~~~i~pgHg~~~~~ 203 (228)
T 1jjt_A 148 LPERKILFGGCFIKPYGLGNL---GDANIEAWPKSAKLLKSKYGKAKLVVPSHSEVGDA 203 (228)
T ss_dssp ETTTTEEEEETTCCTTCCCCC---TTCCTTTHHHHHHHHHHHTTTCSEEEESSSCCBCT
T ss_pred ECCCcEEEEeccccccccCcc---CccCHHHHHHHHHHHHhhcCCCCEEEcCCCCcCCH
Confidence 998899999999875443332 456889999999999987 788999999998763
No 16
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.94 E-value=2.5e-26 Score=221.10 Aligned_cols=190 Identities=17% Similarity=0.227 Sum_probs=143.2
Q ss_pred CCCCCccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHcCC---
Q 013654 179 PPTLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLP--- 255 (439)
Q Consensus 179 ~~~~~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~~--- 255 (439)
...+...++.+|+|.+. ....|+|+|..+ ++.+|||||.... ...+.+.+++.+
T Consensus 5 ~~~~~~~~i~~~v~~i~--------~~~~n~~li~~~--------------~~~iLID~G~~~~-~~~l~~~l~~~g~~~ 61 (263)
T 1k07_A 5 PNPFPPFRIAGNLYYVG--------TDDLASYLIVTP--------------RGNILINSDLEAN-VPMIKASIKKLGFKF 61 (263)
T ss_dssp CCBCCCEEEETTEEECC--------BSSBCCEEEEET--------------TEEEEECCCCGGG-HHHHHHHHHHTTCCG
T ss_pred cCCcCCeEEECCEEEEC--------CCCeEEEEEEeC--------------CceEEEECCCccc-HHHHHHHHHHcCCCH
Confidence 33456688999999983 224577777653 4589999998633 234444444443
Q ss_pred -CccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCC-------------C--CCCceecCCCceEEECCeE
Q 013654 256 -RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDD-------------W--SLGYTSVSGSEDICVGGQR 319 (439)
Q Consensus 256 -~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~-------------~--~~~~~~v~~g~~l~lGg~~ 319 (439)
++++||+||.|+||++|+..+.+.+ +++||+++.+.+.+.... + ......+.+|+.+.+|+.+
T Consensus 62 ~~i~~IilTH~H~DH~gg~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~ 140 (263)
T 1k07_A 62 SDTKILLISHAHFDHAAGSELIKQQT-KAKYMVMDEDVSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELGGTV 140 (263)
T ss_dssp GGEEEEECSSSSHHHHTTHHHHHHHH-CCEEEEEHHHHHHHHTTTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEETTEE
T ss_pred HHCcEEEeCCCCccccccHHHHHHhc-CCEEEEcHHHHHHHhcccccccccCccccccCCCCCcceEeCCCCEEEECCeE
Confidence 4679999999999999999998875 899999999887764321 1 0134568899999999999
Q ss_pred EEEEeCCCCCCCCEEEEECC---c---cEEEEccccccCccccccc-CCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCC
Q 013654 320 LTVVFSPGHTDGHVALLHAS---T---NSLIVGDHCVGQGSAVLDI-TAGGNMTDYFQSTYKFLELSPHALIPMHGRVNL 392 (439)
Q Consensus 320 l~vi~tpGHt~g~~~l~~~~---~---~iLftGD~l~~~~~~~~~~-~~~~~~~~~~~sL~rL~~l~~~~IvPgHG~~~~ 392 (439)
++++++||||+|+++++++. + ++||+||+........... ...++..+|++|+++|.++++++++||||+...
T Consensus 141 i~~i~~pGHt~g~~~~~~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~i~pgHg~~~~ 220 (263)
T 1k07_A 141 LTAHLTPGHTRGCTTWTMKLKDHGKQYQAVIIGSIGVNPGYKLVDNITYPKIAEDYKHSIKVLESMRCDIFLGSHAGMFD 220 (263)
T ss_dssp EEEEECCSSSTTCEEEEEEEEETTEEEEEEEECCCCCCTTCCCSSCSSCTTHHHHHHHHHHHHHTBCCSEEEESBHHHHT
T ss_pred EEEEECCCCCCCcEEEEEecccCCceeEEEEECCcccCCCccccCCCcCcccHHHHHHHHHHHHccCCCEEEcCCCcccc
Confidence 99999999999999999874 2 6999999865222111111 123578999999999999999999999998665
No 17
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.94 E-value=1.8e-26 Score=222.08 Aligned_cols=151 Identities=21% Similarity=0.279 Sum_probs=123.5
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCCCceecCC
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSG 309 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~~~~~v~~ 309 (439)
++.+|||||....+.+.+.+. -.++++|++||.|+||+||+..+++.+ +++||+++.+...+.. ....+++
T Consensus 23 ~~~~lID~g~~~~i~~~l~~~---g~~i~~Il~TH~H~DH~gg~~~l~~~~-~~~v~~~~~~~~~~~~-----~~~~~~~ 93 (254)
T 1xm8_A 23 GTVGVVDPSEAEPIIDSLKRS---GRNLTYILNTHHHYDHTGGNLELKDRY-GAKVIGSAMDKDRIPG-----IDMALKD 93 (254)
T ss_dssp CCEEEECCSSHHHHHHHHHHH---TCCCCEEECSSCCHHHHTTHHHHHHHH-CCEEEEEGGGGGGSTT-----EEEEECT
T ss_pred CEEEEEeCCCHHHHHHHHHHc---CCCccEEEECCCCCcccccHHHHHHHc-CCeEEEchhhhhcCCC-----CceeeCC
Confidence 458999999543333333332 125679999999999999999999887 7999999887665532 3457889
Q ss_pred CceEEECCeEEEEEeCCCCCCCCEEEEECCccEEEEccccccCcccccccCCCCCHHHHHHHHHHHHcCCCC-EEEeCCC
Q 013654 310 SEDICVGGQRLTVVFSPGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLELSPH-ALIPMHG 388 (439)
Q Consensus 310 g~~l~lGg~~l~vi~tpGHt~g~~~l~~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~~l~~~-~IvPgHG 388 (439)
|+.+.+|+.+++++++||||+||+++++++.++||+||+++..+.+. .+.++..+|++|+++|.+++.+ .|+||||
T Consensus 94 g~~~~lg~~~~~vi~tPGHt~g~~~~~~~~~~~lftGD~l~~~~~g~---~~~~~~~~~~~Sl~~l~~l~~~~~v~pgHg 170 (254)
T 1xm8_A 94 GDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIFTGDTMFSLSCGK---LFEGTPKQMLASLQKITSLPDDTSIYCGHE 170 (254)
T ss_dssp TCEEEETTEEEEEEECCSSSSSCEEEEEGGGTEEEEETTEETTEECC---CSSSCHHHHHHHHHHHHTSCTTCEEEESBC
T ss_pred CCEEEECCEEEEEEECCCCCCCcEEEEECCCCEEEEcCccccCCCCC---CCCCCHHHHHHHHHHHHccCCCcEEEeCCc
Confidence 99999999999999999999999999998889999999998654443 2568999999999999999887 6999999
Q ss_pred CCCC
Q 013654 389 RVNL 392 (439)
Q Consensus 389 ~~~~ 392 (439)
++..
T Consensus 171 ~~~~ 174 (254)
T 1xm8_A 171 YTLS 174 (254)
T ss_dssp CHHH
T ss_pred chhc
Confidence 8654
No 18
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.94 E-value=9.3e-26 Score=219.84 Aligned_cols=187 Identities=19% Similarity=0.199 Sum_probs=141.6
Q ss_pred CCccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHcCC----Cc
Q 013654 182 LSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLP----RK 257 (439)
Q Consensus 182 ~~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~~----~i 257 (439)
+...++.+|+|++. ....|+|+|..+ ++.+|||||.... ...+.+.+++.+ ++
T Consensus 38 ~~~~~i~~~v~~~~--------~~~~n~~li~~~--------------~~~iLID~G~~~~-~~~~~~~l~~~g~~~~~i 94 (294)
T 3m8t_A 38 FEPFQLIDNIYYVG--------TDGIAVYVIKTS--------------QGLILMDTAMPQS-TGMIKDNIAKLGFKVADI 94 (294)
T ss_dssp CCCEEEETTEEECC--------CSSSCCEEEEET--------------TEEEEECCCCGGG-HHHHHHHHHHTTCCGGGE
T ss_pred CCCEEEeCCEEEeC--------CCCeEEEEEEEC--------------CceEEEECCCchh-HHHHHHHHHHcCCCHHHC
Confidence 45578889999883 223567777553 4589999998533 234444444443 46
Q ss_pred cEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCC-------------CCCceecCCCceEEECCeEEEEEe
Q 013654 258 LIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDW-------------SLGYTSVSGSEDICVGGQRLTVVF 324 (439)
Q Consensus 258 ~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~-------------~~~~~~v~~g~~l~lGg~~l~vi~ 324 (439)
++||+||.|.||+||+..+.+. ++++||+++.+...+..... ......+.+|+.+.+|+.++++++
T Consensus 95 ~~ii~TH~H~DH~gg~~~l~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~ 173 (294)
T 3m8t_A 95 KLILNTHAHLDHTGGFAEIKKE-TGAQLVAGERDKPLLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAHA 173 (294)
T ss_dssp EEEECSCCCHHHHTTHHHHHHH-HCCEEEEEGGGHHHHHHTCBTTBTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEE
T ss_pred cEEEECCCCccccccHHHHhhc-cCCEEEEChHHHHHHhcccccCccccccCCCCCCCCceEeCCCCEEEeCCEEEEEEe
Confidence 7999999999999999999887 48999999998877654310 112356889999999999999999
Q ss_pred CCCCCCCCEEEEEC--Cc----cEEEEccccccCccccccc-CCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCCC
Q 013654 325 SPGHTDGHVALLHA--ST----NSLIVGDHCVGQGSAVLDI-TAGGNMTDYFQSTYKFLELSPHALIPMHGRVNLW 393 (439)
Q Consensus 325 tpGHt~g~~~l~~~--~~----~iLftGD~l~~~~~~~~~~-~~~~~~~~~~~sL~rL~~l~~~~IvPgHG~~~~~ 393 (439)
+||||+|+++++++ +. ++||+||+++... ..... ...++..+|.++++++..+++++++||||+....
T Consensus 174 ~pgHt~g~~~~~~~~~~~~~~~~~lf~GD~~~~~~-~~~~~~~~~~~~~~~~~sl~~l~~l~~~~v~pgHg~~~~~ 248 (294)
T 3m8t_A 174 TPGHSPGCTSWEMTVKDGKEDREVLFFCSGTVALN-RLVGQPTYAGIVDDYRATFAKAKAMKIDVLLGPHPEVYGM 248 (294)
T ss_dssp CCSSSTTCEEEEEEEEETTEEEEEEECCCCCCTTC-CCSSSCSSTTHHHHHHHHHHHHHHSCCSEEECSSGGGTTH
T ss_pred CCCCCccCEEEEEEccCCCccceEEEEcCccCCCC-cCcCCCCCCchHHHHHHHHHHHHCCCCCEEEcCCCChhch
Confidence 99999999999985 23 6999999985432 22111 1234689999999999999999999999997763
No 19
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.94 E-value=1.6e-25 Score=228.06 Aligned_cols=210 Identities=16% Similarity=0.192 Sum_probs=150.4
Q ss_pred CCccccCCceEEEEcCCCCCCCc------c-cccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCc---HHHHHHHHH
Q 013654 182 LSYQEYPPGVILVPMQSRTAKPF------L-TTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSE---FHEELLKVV 251 (439)
Q Consensus 182 ~~~~ev~~Gv~~i~~~~~~~~p~------~-~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~---~~~~l~~~~ 251 (439)
+.+.+|.+|||+++.+......| + ..|+|++.. .++.+|||||.... +...+.+..
T Consensus 3 ~~~~~i~~~v~~~~~~~~~~~~f~~~~~~g~~~n~~li~~--------------~~~~iLiD~g~~~~~~~~~~~l~~~~ 68 (404)
T 2ohh_A 3 AAAKRISDGVYWTGVLDWDLRNYHGYTLQGTTYNAYLVCG--------------DEGVALIDNSYPGTFDELMARVEDAL 68 (404)
T ss_dssp CCCEEEETTEEECCEEETTCCEETTEECSCEEECCEEEEC--------------SSCEEEECCCCTTCHHHHHHHHHHHH
T ss_pred ceeEEeeCCeEEEEeccCCccccceecCCCCeEEEEEEEe--------------CCcEEEEeCCCCccHHHHHHHHHHHh
Confidence 34678999999996543211112 1 123343332 13489999998743 223333331
Q ss_pred H--cCCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccC-CC--CCCceecCCCceEEECCeEEEEEeCC
Q 013654 252 A--SLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-DW--SLGYTSVSGSEDICVGGQRLTVVFSP 326 (439)
Q Consensus 252 ~--~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~-~~--~~~~~~v~~g~~l~lGg~~l~vi~tp 326 (439)
. ...++++||+||.|+||++|+..+.+.+|+++||+++.+.+.+... .. ......+++|+.+.+|+.+++++++|
T Consensus 69 ~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~p~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~p 148 (404)
T 2ohh_A 69 QQVGMERVDYIIQNHVEKDHSGVLVELHRRFPEAPIYCTEVAVKGLLKHYPSLREAEFMTVKTGDVLDLGGKTLTFLETP 148 (404)
T ss_dssp HHHTCCCCCEEECSCCSHHHHTTHHHHHHHSTTCCEEECHHHHHHHHHHCGGGGGSCEEECCTTCEEECSSCEEEEEECT
T ss_pred ccCCccCCCEEEeCCCCCcccchHHHHHHHCCCCEEEECHHHHHHHHHHhcccccCCceEcCCCCEEEECCEEEEEEeCC
Confidence 0 3457789999999999999999999999999999999887766432 11 13456789999999999999999999
Q ss_pred -CCCCCCEEEEECCccEEEEccccccC--ccccccc-CC----------------CCCHHHHHHHHHHHHcCCC----CE
Q 013654 327 -GHTDGHVALLHASTNSLIVGDHCVGQ--GSAVLDI-TA----------------GGNMTDYFQSTYKFLELSP----HA 382 (439)
Q Consensus 327 -GHt~g~~~l~~~~~~iLftGD~l~~~--~~~~~~~-~~----------------~~~~~~~~~sL~rL~~l~~----~~ 382 (439)
|||+|++++++++.++||+||++... ....+.. .+ ......+.+|+++|+++++ ++
T Consensus 149 ~gH~~~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~~~~~ 228 (404)
T 2ohh_A 149 LLHWPDSMFTLLDEDGILFSNDAFGQHLCCPQRLDREIPEYILMDAARKFYANLITPLSKLVLKKFDEVKELGLLERIQM 228 (404)
T ss_dssp TSSSTTCEEEEEETTTEEECTTTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCGGGCSE
T ss_pred CCCCCCceEEEECCCcEEEecCccccCcCcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccE
Confidence 99999999999988999999997322 2222211 00 0123456899999999999 89
Q ss_pred EEeCCCCCCCChHHHHHHHHHHH
Q 013654 383 LIPMHGRVNLWPKHMLCGYLKYE 405 (439)
Q Consensus 383 IvPgHG~~~~~~~~~i~~~L~~~ 405 (439)
|+||||++...+.+.++.|++..
T Consensus 229 i~pgHg~~~~~~~~~~~~~~~~~ 251 (404)
T 2ohh_A 229 IAPSHGQIWTDPMKIIEAYTGWA 251 (404)
T ss_dssp EECSSSCBBSSHHHHHHHHHHHH
T ss_pred EecCCCccccCHHHHHHHHHHHh
Confidence 99999998877666666776654
No 20
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.93 E-value=1.2e-25 Score=230.36 Aligned_cols=222 Identities=15% Similarity=0.172 Sum_probs=150.9
Q ss_pred ccccccCCCCCCCccccCC--ceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEe-c-CCeEEEcCCCCCcHHHH
Q 013654 171 VQWRKWKVPPTLSYQEYPP--GVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVA-Q-GEALIVDPGCRSEFHEE 246 (439)
Q Consensus 171 ~~~~~~~~~~~~~~~ev~~--Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi-~-g~~vLID~G~~~~~~~~ 246 (439)
-++...+|| ...+++|.+ |+|+++......+-| .+.|-+.. |++. |+|++ + ++.+|||||..... +.
T Consensus 6 ~~~~~~~m~-~~~~~ki~d~p~iy~vg~~d~~~~~F--e~~~~~~~----Gtsy-NsYLI~~~~~~vLIDtg~~~~~-~~ 76 (410)
T 4dik_A 6 IHHHHHHMP-KIWTERIFDDPEIYVLRIDDDRIRYF--EAVWEIPE----GISY-NAYLVKLNGANVLIDGWKGNYA-KE 76 (410)
T ss_dssp ---CCSSCC-CEEEEEEETTTEEEEEEEEECSCCEE--TTTEECTT----CEEE-EEEEEECSSCEEEECCCCGGGH-HH
T ss_pred cccccccCC-cceEEEEecCCCEEEEeeecCCCcce--eeeeeCCC----ceEE-EEEEEEECCeEEEEeCCCcchH-HH
Confidence 344443444 334567654 799998765433323 34444432 2233 34454 3 35899999976443 33
Q ss_pred HHHHHHcC---CCccEEEeCCCchhhhcChHHHHHhC-CCCEEEeCHhHHHHhccCCCCCCceecCCCceEEECCeEEEE
Q 013654 247 LLKVVASL---PRKLIVFVTHHHRDHVDGLSIIQKCN-PDAILLAHENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTV 322 (439)
Q Consensus 247 l~~~~~~~---~~i~~VilTH~H~DHigG~~~l~~~~-p~a~V~~~~~~~~~l~~~~~~~~~~~v~~g~~l~lGg~~l~v 322 (439)
+.+.+++. .++++||+||.|+||+||+..+.+++ |+++|++++.....+....-......+++|+++++|+.++++
T Consensus 77 ~l~~l~~~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~~~~~v~~s~~~~~~l~~~~~~~~~~~v~dGd~l~lG~~~L~~ 156 (410)
T 4dik_A 77 FIDALSKIVDPKEITHIIVNHTEPDASGSLPATLKTIGHDVEIIASNFGKRLLEGFYGIKDVTVVKDGEEREIGGKKFKF 156 (410)
T ss_dssp HHHHHTTTSCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHHHHHHHHHHCCCCEEECCTTCEEEETTEEEEE
T ss_pred HHHHHHHhcCcccCCEEEeCcCCcchhhhHHHHHHHcCCCCEEEeCHHHHHHHHhhcCccceeEecCCCEEeecceEEEE
Confidence 33333332 35679999999999999999998764 789999999988776543223456789999999999999999
Q ss_pred EeCCC-CCCCCEEEEECCccEEEEccccccCccccccc-CCCC-------------------CHHHHHHHHHHHHcCCCC
Q 013654 323 VFSPG-HTDGHVALLHASTNSLIVGDHCVGQGSAVLDI-TAGG-------------------NMTDYFQSTYKFLELSPH 381 (439)
Q Consensus 323 i~tpG-Ht~g~~~l~~~~~~iLftGD~l~~~~~~~~~~-~~~~-------------------~~~~~~~sL~rL~~l~~~ 381 (439)
++||| ||||+++++.+ ++|||||++.......... .... ....+.++|+++.+|+++
T Consensus 157 i~tPg~H~p~~~~~y~~--~iLFsgD~fg~h~~~~~~~d~~~~~~e~~~~~~~~yy~~i~~p~~~~v~~~L~kl~~Ldi~ 234 (410)
T 4dik_A 157 VMTPWLHWPDTMVTYLD--GILFSCDVGGGYLLPEILDDSNESVVERYLPHVTKYIVTVIGHYKNYILEGAEKLSSLKIK 234 (410)
T ss_dssp EECTTSSSTTCEEEEET--TEEEEETTTCCSSCCSSSBTTCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHTSCCS
T ss_pred ecCCCCCCCCCeeEEeC--CceEccccccccccCccccccchhhHHHHHHHHHHHHHhhccchHHHHHHHHHHHhCCCCC
Confidence 99999 99999999974 8999999875443332111 0000 112336789999999999
Q ss_pred EEEeCCCCCCC-ChHHHHHHHHH
Q 013654 382 ALIPMHGRVNL-WPKHMLCGYLK 403 (439)
Q Consensus 382 ~IvPgHG~~~~-~~~~~i~~~L~ 403 (439)
+|+||||++.+ ++...+..|.+
T Consensus 235 ~I~P~HGpi~r~~~~~ii~~Y~~ 257 (410)
T 4dik_A 235 ALLPGHGLIWKKDPQRLLNHYVS 257 (410)
T ss_dssp EEEESSSCBBSSCHHHHHHHHHH
T ss_pred EEecCCcchhhcCHHHHHHHHHH
Confidence 99999999986 56665555543
No 21
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=99.93 E-value=1.2e-25 Score=243.45 Aligned_cols=208 Identities=16% Similarity=0.198 Sum_probs=153.2
Q ss_pred CCccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHc---CCCcc
Q 013654 182 LSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVAS---LPRKL 258 (439)
Q Consensus 182 ~~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~---~~~i~ 258 (439)
..+.+|.+|||+++ .....|+|+|..+ ++.+|||||........+.+.+.+ ..+++
T Consensus 105 ~~l~~V~~gVy~i~-------g~~~~N~ylI~~~--------------~g~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~ 163 (658)
T 2cfu_A 105 YGLFEVAEGIYQVR-------GFDLANITFIRGD--------------SGWIVVDTLTTPATARAAYELVSRELGERPIR 163 (658)
T ss_dssp CEEEEEETTEEEEE-------SSSSSCEEEEECS--------------SSEEEECCCSSHHHHHHHHHHHHHHHCCCCEE
T ss_pred CCcEEEeCCEEEEe-------cCCCeEEEEEEEC--------------CEEEEEECCCCHHHHHHHHHHHHhhCCCCCce
Confidence 45688999999995 2335688888753 558999999986543333333332 35677
Q ss_pred EEEeCCCchhhhcChHHHHHh----CCCCEEEeCHhHHHHhcc-----------------CC------------------
Q 013654 259 IVFVTHHHRDHVDGLSIIQKC----NPDAILLAHENTMRRIGK-----------------DD------------------ 299 (439)
Q Consensus 259 ~VilTH~H~DHigG~~~l~~~----~p~a~V~~~~~~~~~l~~-----------------~~------------------ 299 (439)
+||+||.|+||+||+..|.+. +++++||+++.+.+.+.. ..
T Consensus 164 ~IIlTH~H~DH~GG~~~l~~~~~~~~~~a~V~a~~~~~~~~~~e~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~ 243 (658)
T 2cfu_A 164 TVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGFMEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGL 243 (658)
T ss_dssp EEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEETTHHHHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCC
T ss_pred EEEECCCChhhhCCHHHHHhhhhccCCCCEEEEchhHHHHHhhhhhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccc
Confidence 999999999999999998753 579999999876443210 00
Q ss_pred ------CCCCceec-CCCceEEECCeEEEEEeCCCC-CCCCEEEEECCccEEEEccccccCcccccc---cCCCCCHHHH
Q 013654 300 ------WSLGYTSV-SGSEDICVGGQRLTVVFSPGH-TDGHVALLHASTNSLIVGDHCVGQGSAVLD---ITAGGNMTDY 368 (439)
Q Consensus 300 ------~~~~~~~v-~~g~~l~lGg~~l~vi~tpGH-t~g~~~l~~~~~~iLftGD~l~~~~~~~~~---~~~~~~~~~~ 368 (439)
.......+ ++|+++.+||.+++++++||| |+||+++++++.++||+||+++.. .+.+. .....+..+|
T Consensus 244 ~~g~~~~~~p~~~~~~dG~~l~lgg~~l~vi~tPGHhTpg~i~~~~p~~~vLftGD~v~~~-~~~i~~~~g~~~~d~~~~ 322 (658)
T 2cfu_A 244 ARGPLSLLAPTRLIEGEGEDLVLDGVPFTFQNTPGTESPAEMNIWLPRQKALLMAENVVGT-LHNLYTLRGAEVRDALGW 322 (658)
T ss_dssp CCSCCCCCCCSEEECTTEEEEEETTEEEEEEECTTSSSSSBEEEEETTTTEEECTTTSCSS-CCCSSCTTCCCCCCHHHH
T ss_pred cCCCccCCCCcEEEecCceEEEECCEEEEEEeCCCCCCCCcEEEEECCCCEEEEecccccc-CCccccCCCcccCCHHHH
Confidence 00122345 588999999999999999999 999999999999999999998743 22221 1123588999
Q ss_pred HHHHHHHHcC---CCCEEEeCCCCCCCChHHHHHHHHHHHHhhhccc
Q 013654 369 FQSTYKFLEL---SPHALIPMHGRVNLWPKHMLCGYLKYERQLFLFF 412 (439)
Q Consensus 369 ~~sL~rL~~l---~~~~IvPgHG~~~~~~~~~i~~~L~~~~~~~~~i 412 (439)
.+++++++.+ ++++++||||+++.+ .+.+.++++++++..+.+
T Consensus 323 ~~sL~~l~~l~~l~~~~v~PGHg~p~~g-~~~i~~~l~~~rd~l~~l 368 (658)
T 2cfu_A 323 SKYINQALHRFGRQAEVMFAVHNWPRWG-NAEIVEVLEKQRDLYGYL 368 (658)
T ss_dssp HHHHHHHHHHTGGGCSEEECSSSCCEES-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcEEEeCCCCccCC-HHHHHHHHHHHHHHHHHH
Confidence 9999988776 889999999988765 456777777766555433
No 22
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=99.93 E-value=3.5e-25 Score=205.18 Aligned_cols=191 Identities=17% Similarity=0.114 Sum_probs=144.2
Q ss_pred ccccC-CceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEe
Q 013654 184 YQEYP-PGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLPRKLIVFV 262 (439)
Q Consensus 184 ~~ev~-~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~~~i~~Vil 262 (439)
++++. +|+|.+....+ ......|+|+|..+ ++.+|||||.... .+.+.+++.+++++|++
T Consensus 2 ~~~i~~~~v~~~~~~~~--~~~~~~n~~li~~~--------------~~~iliD~g~~~~---~~~~~l~~~g~i~~ii~ 62 (201)
T 2p97_A 2 MKSLHRPDLYSWSTFNP--ARNIDFNGFAWIRP--------------EGNILIDPVALSN---HDWKHLESLGGVVWIVL 62 (201)
T ss_dssp CEECSSTTEEEEEEEET--TTTEEEEEEEECCT--------------TCCEEESCCCCCH---HHHHHHHHTTCCSEEEC
T ss_pred cccccCCCEEeeecccC--CCCcceeEEEEEeC--------------CeeEEEECCCCcH---HHHHHHHhcCCCCEEEE
Confidence 46788 99999965332 12234677877653 4589999995433 23344445567889999
Q ss_pred CCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCCCceecCCCceEEECCeEEEEEeCC-CCCCCCEEEEECCcc
Q 013654 263 THHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVVFSP-GHTDGHVALLHASTN 341 (439)
Q Consensus 263 TH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~~~~~v~~g~~l~lGg~~l~vi~tp-GHt~g~~~l~~~~~~ 341 (439)
||. ||++|+..+++.+ +++||+++.+.+.+... ....+++|+.+. + .++++++| |||+|++++++++ +
T Consensus 63 TH~--DH~gg~~~~~~~~-~a~v~~~~~~~~~~~~~----~~~~~~~g~~~~--~-~~~~~~~p~gHt~g~~~~~~~~-~ 131 (201)
T 2p97_A 63 TNS--DHVRSAKEIADQT-YTKIAGPVAEKENFPIY----CDRWLSDGDELV--P-GLKVMELQGSKTPGELALLLEE-T 131 (201)
T ss_dssp SSG--GGCTTHHHHHHHS-CCEEEEEGGGTTSCSSC----CSEEECTTCBSS--T-TEEEEEECSSSSTTEEEEEETT-T
T ss_pred CCc--hhhhhHHHHHHhc-CCEEEEcHhHhhhhccc----CceecCCCCEEc--c-eEEEEECCCCCCCCcEEEEEcC-C
Confidence 999 9999999999987 69999999887665432 145677888763 2 59999999 9999999999987 9
Q ss_pred EEEEccccccCcccccccC-C--CCCHHHHHHHHHHHHc-CCCCEEEeCCCCCC-CChHHHHHHHHHH
Q 013654 342 SLIVGDHCVGQGSAVLDIT-A--GGNMTDYFQSTYKFLE-LSPHALIPMHGRVN-LWPKHMLCGYLKY 404 (439)
Q Consensus 342 iLftGD~l~~~~~~~~~~~-~--~~~~~~~~~sL~rL~~-l~~~~IvPgHG~~~-~~~~~~i~~~L~~ 404 (439)
+||+||+++.......... + ..+..+|.+|+++|.+ ++++.++||||.++ .++.+.+++|++.
T Consensus 132 ~lf~GD~~~~~~~g~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~~v~pgHg~~~~~~~~~~l~~~~~~ 199 (201)
T 2p97_A 132 TLITGDLVRAYRAGGLEILPDEKLMNKQKVVASVRRLAALEKVEAVLVGDGWSVFRDGRDRLKELVAT 199 (201)
T ss_dssp EEEECSSEEBSSTTSCEECCGGGCSCHHHHHHHHHHHHTCTTCCEEEESBBCCBCSCHHHHHHHHHHH
T ss_pred EEEECccccccCCCccccCCccccCCHHHHHHHHHHHHhcCCCCEEEeCCCcceecCHHHHHHHHHHh
Confidence 9999999876522222111 1 3689999999999999 68999999999544 6788888877764
No 23
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.93 E-value=5.3e-25 Score=223.85 Aligned_cols=216 Identities=16% Similarity=0.188 Sum_probs=149.5
Q ss_pred ccccCCceEEEEcCCCCCCCcccccE-EEEccCCCCCCCCceEEEe-cCCeEEEcCCCCCcHHHHHHHHHH---cCCCcc
Q 013654 184 YQEYPPGVILVPMQSRTAKPFLTTNL-IVFAPDSVSDDCGNHRFVA-QGEALIVDPGCRSEFHEELLKVVA---SLPRKL 258 (439)
Q Consensus 184 ~~ev~~Gv~~i~~~~~~~~p~~~~N~-y~i~~~~g~~~~~~s~~vi-~g~~vLID~G~~~~~~~~l~~~~~---~~~~i~ 258 (439)
+.+|.+|||+++........|. +. +-+. .+..+++|++ +++.+|||||..... +.+.+.++ ...+++
T Consensus 3 ~~~i~~~v~~v~~~d~~~~~f~--~~~~~~~-----~g~~~n~~li~~~~~iliD~g~~~~~-~~~~~~l~~~~~~~~i~ 74 (398)
T 1ycg_A 3 PVAITDGIYWVGAVDWNIRYFH--GPAFSTH-----RGTTYNAYLIVDDKTALVDTVYEPFK-EELIAKLKQIKDPVKLD 74 (398)
T ss_dssp CEEEETTEEECCEEESSCCEET--TTTEECT-----TCEEECCEEECSSSCEEECCCCGGGH-HHHHHHHHHHCSSCCCS
T ss_pred ceEEeCCEEEEEeecCCccccc--ceeccCC-----CCeeEEEEEEECCCEEEEeCCCcccH-HHHHHHHHHhcCcccCC
Confidence 4689999999964321111110 00 1111 0112233333 345899999987322 22333332 245678
Q ss_pred EEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccC-CC-CCCceecCCCceEEECCeEEEEEeCC-CCCCCCEEE
Q 013654 259 IVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-DW-SLGYTSVSGSEDICVGGQRLTVVFSP-GHTDGHVAL 335 (439)
Q Consensus 259 ~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~-~~-~~~~~~v~~g~~l~lGg~~l~vi~tp-GHt~g~~~l 335 (439)
+||+||.|+||++|+..+.+.+|+++||+++.+.+.+... .. ......+++|+.+++|+.+++++++| |||+|++++
T Consensus 75 ~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~ 154 (398)
T 1ycg_A 75 YLVVNHTESDHAGAFPAIMELCPDAHVLCTQRAFDSLKAHYSHIDFNYTIVKTGTSVSLGKRSLTFIEAPMLHWPDSMFT 154 (398)
T ss_dssp EEEESCCSHHHHTTHHHHHHHCTTCEEEECHHHHHHHHHHTCSCCCEEEECCTTCEEECSSCEEEEEECTTSSSTTCEEE
T ss_pred EEEeCCCCcchhhhHHHHHHHCCCCEEEEcHHHHHHHHHHhCCCCcceEEeCCCCEEeeCCcEEEEEeCCCCCCCCcEEE
Confidence 9999999999999999999999999999999987766431 11 13456789999999999999999999 899999999
Q ss_pred EECCccEEEEccccccCcccc--ccc--CC---------------CCCHHHHHHHHHHHHc--CCCCEEEeCCCCCCC-C
Q 013654 336 LHASTNSLIVGDHCVGQGSAV--LDI--TA---------------GGNMTDYFQSTYKFLE--LSPHALIPMHGRVNL-W 393 (439)
Q Consensus 336 ~~~~~~iLftGD~l~~~~~~~--~~~--~~---------------~~~~~~~~~sL~rL~~--l~~~~IvPgHG~~~~-~ 393 (439)
+.++.++||+||++...+... +.. .+ ......+.+++++|.+ +++++|+||||++.. +
T Consensus 155 ~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~l~~l~~~~l~~~~i~p~Hg~~~~~~ 234 (398)
T 1ycg_A 155 YVPEEALLLPNDAFGQHIATSVRFDDQVDAGLIMDEAAKYYANILMPFSNLITKKLDEIQKINLAIKTIAPSHGIIWRKD 234 (398)
T ss_dssp EETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEESSSCBBCSC
T ss_pred EECCCcEEEeccccccccCccccccccccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhCCCCccEEECCCchhhhCC
Confidence 999899999999964433221 110 00 0112334689999999 999999999999886 6
Q ss_pred hHHHHHHHHHHHHh
Q 013654 394 PKHMLCGYLKYERQ 407 (439)
Q Consensus 394 ~~~~i~~~L~~~~~ 407 (439)
+.+.+..|++..+.
T Consensus 235 ~~~~l~~~~~~~~~ 248 (398)
T 1ycg_A 235 PGRIIEAYARWAEG 248 (398)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcc
Confidence 77777777765543
No 24
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.93 E-value=2.8e-25 Score=214.30 Aligned_cols=148 Identities=28% Similarity=0.394 Sum_probs=120.1
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCCCceecCC
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSG 309 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~~~~~v~~ 309 (439)
++.+|||||....+.+.+.+. .. .+++|++||.|+||+||+..+++.+++++||+++.+. + ......+++
T Consensus 29 ~~~vlID~G~~~~i~~~l~~~--g~-~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~--~-----~~~~~~~~~ 98 (258)
T 2qed_A 29 GRCVIVDPGEAAPVLKAIAEH--KW-MPEAIFLTHHHHDHVGGVKELLQHFPQMTVYGPAETQ--D-----KGATHLVGD 98 (258)
T ss_dssp SEEEEECCSCHHHHHHHHHHH--TC-EEEEEECCSCCHHHHTTHHHHHHHCTTCEEEECGGGG--G-----GTCSEECCT
T ss_pred CcEEEEeCCCcHHHHHHHHHc--CC-CCCEEEeCCCCccccCCHHHHHHHCCCCEEEeccccc--C-----CCCcEEeCC
Confidence 458999999653333333332 12 5669999999999999999999998779999998652 1 124567889
Q ss_pred CceEEECCeEEEEEeCCCCCCCCEEEEECCccEEEEccccccCcccccccCCCCCHHHHHHHHHHHHcCCCC-EEEeCCC
Q 013654 310 SEDICVGGQRLTVVFSPGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFLELSPH-ALIPMHG 388 (439)
Q Consensus 310 g~~l~lGg~~l~vi~tpGHt~g~~~l~~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~~l~~~-~IvPgHG 388 (439)
|+++.+|+.+++++++||||+||++++ +.++||+||+++..+.+.. +.++..+|++|+++|..++.+ .|+||||
T Consensus 99 g~~~~~g~~~~~vi~tPGHt~g~~~~~--~~~~lftGD~l~~~~~g~~---~~~~~~~~~~sl~~l~~l~~~~~v~pgHg 173 (258)
T 2qed_A 99 GDTIRVLGEKFTLFATPGHTLGHVCYF--SRPYLFCGDTLFSGGCGRL---FEGTPSQMYQSLMKINSLPDDTLICCAHE 173 (258)
T ss_dssp TCEEEETTEEEEEEECCSSSTTCEEEE--ETTEEEEETTEETTEECCC---SSSCHHHHHHHHHHHHTSCTTCEEEESBC
T ss_pred CCEEEECCcEEEEEECCCCCCCCeEEE--cCCEEEECCCCCCCCcCCC---CCCCHHHHHHHHHHHHcCCCCeEEECCCc
Confidence 999999999999999999999999999 5689999999986655443 467999999999999999988 5999999
Q ss_pred CCCC
Q 013654 389 RVNL 392 (439)
Q Consensus 389 ~~~~ 392 (439)
+...
T Consensus 174 ~~~~ 177 (258)
T 2qed_A 174 YTLA 177 (258)
T ss_dssp CHHH
T ss_pred chhh
Confidence 8543
No 25
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.93 E-value=2.8e-25 Score=214.60 Aligned_cols=147 Identities=20% Similarity=0.279 Sum_probs=119.1
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCC-CccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCCCceecC
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVS 308 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~-~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~~~~~v~ 308 (439)
++++|||||.... +.+.+++.+ .+++|++||.|+||+||+..+++.+|+++||+++... ......+.
T Consensus 23 ~~~vlID~G~~~~----i~~~l~~~g~~i~~IllTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~--------~~~~~~~~ 90 (260)
T 1qh5_A 23 KEAAIVDPVQPQK----VVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDRI--------GALTHKIT 90 (260)
T ss_dssp TEEEEESCSSHHH----HHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHHHSTTCEEEESCTTS--------TTCSEECC
T ss_pred CEEEEEcCCCHHH----HHHHHHHcCCCccEEEeCCCCccccCCHHHHHHHCCCCEEEECcccC--------CCCCEEeC
Confidence 4589999995433 333333322 3569999999999999999999999899999986421 22346788
Q ss_pred CCceEEECCeEEEEEeCCCCCCCCEEEEE-----CCccEEEEccccccCcccccccCCCCCHHHHHHHH-HHHHcCCCCE
Q 013654 309 GSEDICVGGQRLTVVFSPGHTDGHVALLH-----ASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQST-YKFLELSPHA 382 (439)
Q Consensus 309 ~g~~l~lGg~~l~vi~tpGHt~g~~~l~~-----~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL-~rL~~l~~~~ 382 (439)
+|+.+.+|+.+++++++||||+||++|++ ++.++||+||+++..+.+. .+.++..++++|+ +++..++.++
T Consensus 91 ~g~~~~~g~~~~~vi~tPGHt~g~~~~~~~~~~~~~~~~lftGD~l~~~~~g~---~~~~~~~~~~~Sl~~~l~~l~~~~ 167 (260)
T 1qh5_A 91 HLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFVAGCGK---FYEGTADEMCKALLEVLGRLPPDT 167 (260)
T ss_dssp TTCEEEETTEEEEEEECCSSSTTCEEEEEECSSSSSCCEEEEETTEETTEECC---CTTCCHHHHHHHHHTTTTTSCTTC
T ss_pred CCCEEEECCEEEEEEECCCCCCCCEEEEEeccCCCCCCEEEEcCccccCCcCC---CCCCCHHHHHHHHHHHHHcCCCCe
Confidence 99999999999999999999999999999 6789999999988665444 3678999999999 5789999885
Q ss_pred -EEeCCCCCC
Q 013654 383 -LIPMHGRVN 391 (439)
Q Consensus 383 -IvPgHG~~~ 391 (439)
++||||+..
T Consensus 168 ~v~pgHg~~~ 177 (260)
T 1qh5_A 168 RVYCGHEYTI 177 (260)
T ss_dssp EEEESBCCHH
T ss_pred EEEcCCCchh
Confidence 999999853
No 26
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.93 E-value=5.4e-25 Score=225.39 Aligned_cols=216 Identities=14% Similarity=0.087 Sum_probs=148.4
Q ss_pred CCccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEe-cCCeEEEcCCCCCcHHHHHHHHHHc---CCCc
Q 013654 182 LSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVA-QGEALIVDPGCRSEFHEELLKVVAS---LPRK 257 (439)
Q Consensus 182 ~~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi-~g~~vLID~G~~~~~~~~l~~~~~~---~~~i 257 (439)
+.+.+|.+|||+++........|. . |-+. .+...++|++ +++.+|||||..... +.+.+.+++ ..++
T Consensus 8 ~~~~~i~~~v~~v~~~~~~~~~f~--~-~~~~-----~g~~~n~~li~~~~~iLID~G~~~~~-~~~~~~l~~~~~~~~i 78 (414)
T 2q9u_A 8 VQDQEMIPGVYWVGIVDWMVRIFH--G-YHTD-----EGSSYNSYFIDDECPTVIDSVKYPFA-EEWLSRIAACCPLDKI 78 (414)
T ss_dssp SCCCEEETTEEECCEEESSCCEET--T-EECT-----TCEEECCEEECSSSCEEECCCCGGGH-HHHHHHHHHHSCGGGC
T ss_pred ceeEEeeCCeEEEEEeeCCccccc--c-ccCC-----CCcceeEEEEECCCEEEEeCCCcccH-HHHHHHHHHhcCcccC
Confidence 556789999999864321111111 0 1110 0112223333 345899999985332 223332222 3466
Q ss_pred cEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccC--CCCCCceecCCCceEEECCeEEEEEeCC-CCCCCCEE
Q 013654 258 LIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD--DWSLGYTSVSGSEDICVGGQRLTVVFSP-GHTDGHVA 334 (439)
Q Consensus 258 ~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~--~~~~~~~~v~~g~~l~lGg~~l~vi~tp-GHt~g~~~ 334 (439)
++||+||.|+||+||+..+.+.+|+++||+++.+.+.+... ........+++|+++++|+.+++++++| |||+|+++
T Consensus 79 ~~ii~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg~~~~~~~~~p~gHt~~~~~ 158 (414)
T 2q9u_A 79 KYVVMNHAEGDHASSLKDHYHKFTNATFVCTKKCQEHLKILYGMEKATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTF 158 (414)
T ss_dssp CEEECSCCSGGGTTTHHHHGGGSTTCEEEECHHHHHHHHHHHCCTTCCEEECCTTCCEECSSCEEEEEECTTSSSTTCEE
T ss_pred CEEEeCCCCcchhcCHHHHHHHCCCCEEEECHHHHHHHHHHhCCCCCeeEEeCCCCEEEECCeEEEEEeCCCCCCCCceE
Confidence 79999999999999999999998999999999887766421 1113456788999999999999999999 99999999
Q ss_pred EEECCccEEEEccccccCccc--ccccC-----------------CCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCCC--
Q 013654 335 LLHASTNSLIVGDHCVGQGSA--VLDIT-----------------AGGNMTDYFQSTYKFLELSPHALIPMHGRVNLW-- 393 (439)
Q Consensus 335 l~~~~~~iLftGD~l~~~~~~--~~~~~-----------------~~~~~~~~~~sL~rL~~l~~~~IvPgHG~~~~~-- 393 (439)
++.++.++||+||++...... .+... .......+.++++++..+++++|+||||++...
T Consensus 159 ~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~i~pgHg~~~~~~~ 238 (414)
T 2q9u_A 159 TYCPEDKILFSNDGFGQHYATSRRWADECDVSHVMHLFKEYTANILGLFSAQMRKALEVASTVEIKYILSAHGVSWRGDA 238 (414)
T ss_dssp EEETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCSEEEESSSCBEEHHH
T ss_pred EEECCCeEEEEccccccccCcccccccccchhhHHHHHHHHHHHheehHHHHHHHHHHHHhCCCCCEEECCCcCeecCCC
Confidence 999989999999975432211 11100 012335678999999999999999999998763
Q ss_pred hHHHHHHHHHHHH
Q 013654 394 PKHMLCGYLKYER 406 (439)
Q Consensus 394 ~~~~i~~~L~~~~ 406 (439)
+.+.+..|++..+
T Consensus 239 ~~~~l~~~~~~~~ 251 (414)
T 2q9u_A 239 MGLAIAEYDRWSK 251 (414)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 4455666666554
No 27
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.93 E-value=1e-24 Score=208.77 Aligned_cols=151 Identities=22% Similarity=0.361 Sum_probs=123.4
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCC-CccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCCCceecC
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVS 308 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~-~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~~~~~v~ 308 (439)
++++|||||... .+.+.+.+++.+ .+++||+||.|+||++|+..|++.+++++||+++.+.. .....+.
T Consensus 28 ~~~ilID~g~~~--~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~--------~~~~~~~ 97 (245)
T 2gcu_A 28 KPALLIDPVDKT--VDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKASGS--------KADLFLE 97 (245)
T ss_dssp CEEEEESCBGGG--HHHHHHHHHHHTCEEEEEECSSCCSSSCBSHHHHHHHSTTCEEEEEGGGCC--------CCSEEEC
T ss_pred CcEEEEeCCCch--HHHHHHHHHHCCCeeeEEEeCCCChhhhhhHHHHHHhCCCCeEEecccccc--------cCCEEcC
Confidence 458999999852 133444444333 36799999999999999999998678999999986532 2346789
Q ss_pred CCceEEECCeEEEEEeCCCCCCCCEEEEECCc------cEEEEccccccCcccccccCCCCCHHHHHHHH-HHHHcCCCC
Q 013654 309 GSEDICVGGQRLTVVFSPGHTDGHVALLHAST------NSLIVGDHCVGQGSAVLDITAGGNMTDYFQST-YKFLELSPH 381 (439)
Q Consensus 309 ~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~~~------~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL-~rL~~l~~~ 381 (439)
+|+.+.+|+.+++++++||||+|+++|++++. ++||+||+++..+.+..+. +.++..+|++|+ ++|..++++
T Consensus 98 ~g~~~~~g~~~i~v~~tpGHt~g~~~~~~~~~~~~~~~~~lftGD~~~~~~~~~~d~-~~~~~~~~~~sl~~~l~~l~~~ 176 (245)
T 2gcu_A 98 PGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDF-QEGSSDQLYESVHSQIFTLPKD 176 (245)
T ss_dssp TTCEEEETTEEEEEEECCSSSTTCEEEEECCSTTSCSSCEEEEETTSBTTBCCCCSS-TTCCHHHHHHHHHHHTTTSCTT
T ss_pred CCCEEEECCEEEEEEECCCCCCCCEEEEECCccccccccEEEECCccccCCccCCCC-CCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999875 7999999998766655543 567899999999 899999988
Q ss_pred -EEEeCCCCCC
Q 013654 382 -ALIPMHGRVN 391 (439)
Q Consensus 382 -~IvPgHG~~~ 391 (439)
.|+||||+..
T Consensus 177 ~~v~pgHg~~~ 187 (245)
T 2gcu_A 177 TLIYPAHDYKG 187 (245)
T ss_dssp CEEEESBCSSS
T ss_pred EEEECCCCCCC
Confidence 6999999843
No 28
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.92 E-value=5.5e-25 Score=204.34 Aligned_cols=158 Identities=26% Similarity=0.372 Sum_probs=122.8
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCC-CccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccC--------CC
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD--------DW 300 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~-~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~--------~~ 300 (439)
++.+|||||... +.+.+.+++.+ ++++|++||.|.||++|+..+.+.+ +++||+++.+.+.+... ..
T Consensus 24 ~~~iLiD~G~~~---~~l~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~ 99 (210)
T 2xf4_A 24 RLAALVDPGGDA---EKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQHY-GVPVIGPEKEDEFWLQGLPAQSRMFGL 99 (210)
T ss_dssp CEEEEECCCSCH---HHHHHHHHHHTCEEEEEECSCSCHHHHTTHHHHHHHH-TCCEECCCGGGHHHHHTHHHHHHHTTC
T ss_pred CcEEEEcCCCCH---HHHHHHHHHcCCceeEEEECCCChhhhcCHHHHHHHc-CCcEEEecchHHHHhccchhhhhhcCC
Confidence 458999999643 23444444332 3679999999999999999998876 79999987765443210 11
Q ss_pred -----CCCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEECCccEEEEccccccCcccccccCCCCCHHHHHHHH-HH
Q 013654 301 -----SLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQST-YK 374 (439)
Q Consensus 301 -----~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL-~r 374 (439)
......+++|+.+.+|+.+++++++||||+|++++++++.++||+||+++.......+ .+.++..+|++|+ ++
T Consensus 100 ~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~-~~~~~~~~~~~sl~~~ 178 (210)
T 2xf4_A 100 DECQPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFDEQSQLLISGDVIFKGGVGRSD-FPRGDHTQLIDAIKRK 178 (210)
T ss_dssp CCCCCCCCSBCCCTTCEEEETTEEEEEEECCSSSTTCEEEEETTTTEEEEETSEETTEECCCC-STTCCHHHHHHHHHHH
T ss_pred cccCCCCCceEECCCCEEEECCeEEEEEECCCCCCCcEEEEeCCCCEEEECCEeccCCcCCCC-CCCCCHHHHHHHHHHH
Confidence 1234568899999999999999999999999999999988999999998765433322 2467999999999 79
Q ss_pred HHcCCCC-EEEeCCCCCCC
Q 013654 375 FLELSPH-ALIPMHGRVNL 392 (439)
Q Consensus 375 L~~l~~~-~IvPgHG~~~~ 392 (439)
+++++.+ .++||||++..
T Consensus 179 l~~l~~~~~v~pgHg~~~~ 197 (210)
T 2xf4_A 179 LLPLGDDVTFIPGHGPLST 197 (210)
T ss_dssp TGGGCTTCEEEESSSCCEE
T ss_pred HhcCCCCeEEECCCCCccc
Confidence 9999877 69999999766
No 29
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.92 E-value=2.2e-24 Score=210.58 Aligned_cols=186 Identities=18% Similarity=0.218 Sum_probs=139.2
Q ss_pred CccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHcCC----Ccc
Q 013654 183 SYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLP----RKL 258 (439)
Q Consensus 183 ~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~~----~i~ 258 (439)
...++.+++|++. ....|+|+|..+ ++.+|||||..... +.+.+.+++.+ +++
T Consensus 42 ~~~~i~~~~~~vg--------~~~~~~~li~~~--------------~~~iLiD~G~~~~~-~~~~~~l~~~g~~~~~i~ 98 (303)
T 4ax1_B 42 MPLKVYGNTWYVG--------TCGISALLVTSD--------------AGHILVDAATPQAG-PQILANIRALGFRPEDVR 98 (303)
T ss_dssp CCEEEETTEEECS--------BSSSCCEEECCT--------------TCEEEECCBSTTCH-HHHHHHHHHTTCCGGGEE
T ss_pred CCeEEECCceEeC--------CCCceEEEEEeC--------------CcEEEEECCCcccH-HHHHHHHHHcCCCHHHCc
Confidence 3456677777762 122456666542 55999999975432 34444444443 367
Q ss_pred EEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCC---------------CCCCceecCCCceEEECCeEEEEE
Q 013654 259 IVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDD---------------WSLGYTSVSGSEDICVGGQRLTVV 323 (439)
Q Consensus 259 ~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~---------------~~~~~~~v~~g~~l~lGg~~l~vi 323 (439)
+||+||.|.||++|+..+.+.+ +++||+++.+...+.... .......+++|+++.+|+.+++++
T Consensus 99 ~ii~TH~H~DH~gg~~~l~~~~-~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~ 177 (303)
T 4ax1_B 99 AIVFSHEHFDHAGSLAELQKAT-GAPVYARAPAIDTLKRGLPDRTDPNFEVAEPVAPVANIVTLADDGVVSVGPLALTAV 177 (303)
T ss_dssp EEECSCSSHHHHTTHHHHHHHH-CCCEEEEHHHHHHHHHTSCCTTSTTGGGCCCCCCCSCEEEECTTCEEEETTEEEEEE
T ss_pred EEEcCCCCccccCCHHHHHhhc-CCEEEEcHHHHHHHhccccCccccccccccCcCCCCCcEEeCCCCEEEECCeEEEEE
Confidence 9999999999999999999875 899999999887765431 112356789999999999999999
Q ss_pred eCCCCCCCCEEEEECCc-----cEEEEccccccCcccccccCC----CCCHHHHHHHHHHHHcCCCCEEEeCCCCCCC
Q 013654 324 FSPGHTDGHVALLHAST-----NSLIVGDHCVGQGSAVLDITA----GGNMTDYFQSTYKFLELSPHALIPMHGRVNL 392 (439)
Q Consensus 324 ~tpGHt~g~~~l~~~~~-----~iLftGD~l~~~~~~~~~~~~----~~~~~~~~~sL~rL~~l~~~~IvPgHG~~~~ 392 (439)
++||||+|++++++++. +.+|+||+++.........+. ..+..+|.++++++..+++++++||||....
T Consensus 178 ~~pgHt~g~~~~~~~~~~~~~~~~~l~gD~l~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~vv~~Hg~~~~ 255 (303)
T 4ax1_B 178 ASPGHTPGGTSWTWRSCEGDDCRQMVYADSLTAISDDVFRYSDDAAHPGYLAAFRNTLARVAALDCDILVTPHPSASG 255 (303)
T ss_dssp ECCSSSTTCEEEEEEEEETTEEEEEEECCCCCCCCCSSCCTTCGGGSTTHHHHHHHHHHHHHTSCCSEEECSSGGGGT
T ss_pred eCCCCCccceEEEEEecCCCceeEEEEeCCccccCcCcccCCCCCCCccHHHHHHHHHHHHhcCCCCEEEcCCcchhh
Confidence 99999999999999753 356669998765544443321 2467999999999999999999999998654
No 30
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.92 E-value=1.7e-24 Score=220.50 Aligned_cols=207 Identities=15% Similarity=0.161 Sum_probs=146.3
Q ss_pred CccccCCceEEEEcCCCCCCCc--------c-cccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHc
Q 013654 183 SYQEYPPGVILVPMQSRTAKPF--------L-TTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVAS 253 (439)
Q Consensus 183 ~~~ev~~Gv~~i~~~~~~~~p~--------~-~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~ 253 (439)
.+.+|.+|+|+++........| + ..|+|+|. .++.+|||||.... .+.+.+.+.+
T Consensus 2 ~~~~i~~~v~~v~~~d~~~~~f~~~~~~~~g~~~n~~li~---------------~~~~iliD~G~~~~-~~~~~~~l~~ 65 (402)
T 1e5d_A 2 QATKIIDGFHLVGAIDWNSRDFHGYTLSPMGTTYNAYLVE---------------DEKTTLFDTVKAEY-KGELLCGIAS 65 (402)
T ss_dssp CCEEEETTEEEEEEEETTCCEETTTEECTTCEEEEEEEEC---------------SSSCEEECCCCGGG-HHHHHHHHHT
T ss_pred CceEeeCCeEEEEeccCCcccccCCCcCCCCcceEEEEEE---------------CCCEEEEeCCCCcc-HHHHHHHHHH
Confidence 3578999999997542111111 1 23444443 24589999998632 2334444443
Q ss_pred C---CCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccC-CC-CCCceecCCCceEEECCeEEEEEeCC-C
Q 013654 254 L---PRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-DW-SLGYTSVSGSEDICVGGQRLTVVFSP-G 327 (439)
Q Consensus 254 ~---~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~-~~-~~~~~~v~~g~~l~lGg~~l~vi~tp-G 327 (439)
. .++++||+||.|+||++|+..+.+.+|+++||+++.+.+.+... .. ......+++|+.+.+|+.+++++++| |
T Consensus 66 ~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~p~g 145 (402)
T 1e5d_A 66 VIDPKKIDYLVIQHLELDHAGALPALIEACQPEKIFTSSLGQKAMESHFHYKDWPVQVVKHGETLSLGKRTVTFYETRML 145 (402)
T ss_dssp TSCGGGCCEEEECCCSHHHHTTHHHHHHHHCCSEEEEEHHHHHHHHHHHCCSSCCEEEECTTCEEECSSCEEEEEECTTS
T ss_pred hCCcccCCEEEeCCCCccccccHHHHHHHCCCCEEEEChHHHHHHHHHhCCCCCceEEcCCCCEEEECCCEEEEEeCCCC
Confidence 3 45679999999999999999999988899999999987766421 11 23466789999999999999999999 9
Q ss_pred CCCCCEEEEECCccEEEEccccccCcccc--cccCCC----------------CC-HHHHHHHHHHHHc--CCCCEEEeC
Q 013654 328 HTDGHVALLHASTNSLIVGDHCVGQGSAV--LDITAG----------------GN-MTDYFQSTYKFLE--LSPHALIPM 386 (439)
Q Consensus 328 Ht~g~~~l~~~~~~iLftGD~l~~~~~~~--~~~~~~----------------~~-~~~~~~sL~rL~~--l~~~~IvPg 386 (439)
||+|+++++.++.++||+||++...+... +..... ++ ...+.++++++.. ++++.|+||
T Consensus 146 H~~~~~~~~~~~~~~l~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~~i~p~ 225 (402)
T 1e5d_A 146 HWPDSMVSWFADEKVLISNDIFGQNIAASERFSDQIPVHTLERAMREYYANIVNPYAPQTLKAIETLVGAGVAPEFICPD 225 (402)
T ss_dssp SSTTCEEEEETTTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHTTCCCSEEEES
T ss_pred CCCCcEEEEECCCCEEEecccccCccccccccccccchhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhCCCCcCEEecC
Confidence 99999999999899999999965432211 110000 11 2344688999999 999999999
Q ss_pred CCCCCC---ChHHHHHHHHHHH
Q 013654 387 HGRVNL---WPKHMLCGYLKYE 405 (439)
Q Consensus 387 HG~~~~---~~~~~i~~~L~~~ 405 (439)
||++.. +..+.+..|++..
T Consensus 226 Hg~~~~~~~~~~~~~~~~~~~~ 247 (402)
T 1e5d_A 226 HGVIFRGADQCTFAVQKYVEYA 247 (402)
T ss_dssp SSCBEESHHHHHHHHHHHHHHH
T ss_pred CcceeecCCCHHHHHHHHHHHh
Confidence 999876 3445555555433
No 31
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.92 E-value=3.1e-24 Score=210.83 Aligned_cols=159 Identities=21% Similarity=0.289 Sum_probs=123.8
Q ss_pred CCeEEEcCCCCC---------cHHHHHHHHHHcCC-CccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhcc--
Q 013654 230 GEALIVDPGCRS---------EFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGK-- 297 (439)
Q Consensus 230 g~~vLID~G~~~---------~~~~~l~~~~~~~~-~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~-- 297 (439)
++++|||||... ...+.+.+.+++.+ .+++||+||.|+||++|+..|++.+ +++||+++.+...+..
T Consensus 28 ~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~-~a~i~~~~~~~~~~~~~~ 106 (298)
T 4efz_A 28 GECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLSAAPYLKTRV-GGEIAIGRHVTRVQDVFG 106 (298)
T ss_dssp CEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTCEEEEEECSSCCSSSBCCHHHHHHHH-CCEEEEETTHHHHHHHHH
T ss_pred CeEEEEcCCCCccccccccCcccHHHHHHHHHHCCCcceEEEECCCchhhhhhHHHHHHHh-CCcEEEChhHHHHHHHHH
Confidence 458999999741 12344555555443 3669999999999999999999987 8999999876543210
Q ss_pred -----CC-----CCCCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEECCcc--------EEEEccccccCccc--cc
Q 013654 298 -----DD-----WSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHASTN--------SLIVGDHCVGQGSA--VL 357 (439)
Q Consensus 298 -----~~-----~~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~~~~--------iLftGD~l~~~~~~--~~ 357 (439)
.. .......+.+|+++.+|+.+++++++||||+|+++|++++.+ ++|+||+++....+ ..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~vi~tPGHT~g~~~~~~~~~~~~~~~~~~~lftGD~l~~~~~g~~r~ 186 (298)
T 4efz_A 107 KLFNAGPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEAHAAHDARDAAAFVGDTLFMPDYGTARC 186 (298)
T ss_dssp HHTTCCTTSCSSSTTSSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEETTCCGGGCBCEEECCSSBCCTTTCBCCC
T ss_pred HhcCCcccccccccCCCEEeCCCCEEEECCEEEEEEECCCCCcccEEEEECCCcccccCCceEEEEcCccccCCCCCccC
Confidence 00 011236789999999999999999999999999999998765 99999999865333 33
Q ss_pred ccCCCCCHHHHHHHHHHHHcCCCC-EEEeCCCCC
Q 013654 358 DITAGGNMTDYFQSTYKFLELSPH-ALIPMHGRV 390 (439)
Q Consensus 358 ~~~~~~~~~~~~~sL~rL~~l~~~-~IvPgHG~~ 390 (439)
+. +.++..+|++|+++|..++++ .|+||||..
T Consensus 187 d~-~~~d~~~~~~Sl~kl~~L~~~~~v~pgHg~~ 219 (298)
T 4efz_A 187 DF-PGGDARSLYRSIRKVLSLPPATRLYMCHDYQ 219 (298)
T ss_dssp CS-TTCCHHHHHHHHHHHTTSCTTCEEECSBCSC
T ss_pred CC-CCCCHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 33 568999999999999999998 599999954
No 32
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.92 E-value=1.3e-24 Score=215.20 Aligned_cols=153 Identities=18% Similarity=0.204 Sum_probs=119.9
Q ss_pred CCeEEEcCCCCCc-HHHHHHHHHHcC------CCccEEEeCCCchhhhcChHHHHHhCC------CCEEEeCHhHHHHhc
Q 013654 230 GEALIVDPGCRSE-FHEELLKVVASL------PRKLIVFVTHHHRDHVDGLSIIQKCNP------DAILLAHENTMRRIG 296 (439)
Q Consensus 230 g~~vLID~G~~~~-~~~~l~~~~~~~------~~i~~VilTH~H~DHigG~~~l~~~~p------~a~V~~~~~~~~~l~ 296 (439)
++.+|||||.... +.+.+.+.+++. .++++||+||.|+||++|+..|++.+| +++||+++.+.
T Consensus 51 ~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~~l~~~~~~~~~~~~~~v~~~~~~~---- 126 (311)
T 2p18_A 51 HTLAAVDVNADYKPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAKLKAELEAMNSTVPVVVVGGANDS---- 126 (311)
T ss_dssp TEEEEESCCSCCHHHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHHHHHHHHSCC--CCCEEEEEGGGT----
T ss_pred CcEEEEeCCCChHHHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHHHHHHhhhhcccCCCCEEEEechhc----
Confidence 4589999975542 233333321111 345699999999999999999998875 79999987652
Q ss_pred cCCCCCCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEE--CC---c-cEEEEccccccCcccccccCCCCCHHHHHH
Q 013654 297 KDDWSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLH--AS---T-NSLIVGDHCVGQGSAVLDITAGGNMTDYFQ 370 (439)
Q Consensus 297 ~~~~~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~--~~---~-~iLftGD~l~~~~~~~~~~~~~~~~~~~~~ 370 (439)
.......+.+|+.+.+|+.+++++++||||+|+++|++ ++ . ++||+||+++..+.+.+ +.++..+|++
T Consensus 127 ---~~~~~~~l~~g~~l~lg~~~l~vi~tPGHT~g~i~~~~~~~~~~~~~~~lftGD~l~~~~~g~~---~~~~~~~~~~ 200 (311)
T 2p18_A 127 ---IPAVTKPVREGDRVQVGDLSVEVIDAPCHTRGHVLYKVQHPQHPNDGVALFTGDTMFIAGIGAF---FEGDEKDMCR 200 (311)
T ss_dssp ---CTTCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEECTTCGGGCEEEEEETTEETTEECCC---TTSCHHHHHH
T ss_pred ---CCCCceEeCCCCEEEECCeEEEEEECCCCCcccEEEEEecCCcCCcCCEEEEcCccccCCcCCC---CCCCHHHHHH
Confidence 12245678999999999999999999999999999999 56 6 89999999886654432 5679999999
Q ss_pred HHHHHHcC--------CCC-EEEeCCCCCCC
Q 013654 371 STYKFLEL--------SPH-ALIPMHGRVNL 392 (439)
Q Consensus 371 sL~rL~~l--------~~~-~IvPgHG~~~~ 392 (439)
|+++|..+ +.+ .|+||||+...
T Consensus 201 Sl~kl~~l~~~~~~~~~~~~~v~pgHg~~~~ 231 (311)
T 2p18_A 201 AMEKVYHIHKGNDYALDKVTFIFPGHEYTSG 231 (311)
T ss_dssp HHHHHHTTTGGGTTGGGGGEEEEESBCCHHH
T ss_pred HHHHHHHhhhcccccCCCCeEEEeCCCchhh
Confidence 99999999 776 59999998654
No 33
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.92 E-value=2.1e-24 Score=200.46 Aligned_cols=154 Identities=23% Similarity=0.370 Sum_probs=119.5
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCC-CccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccC-------CC-
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD-------DW- 300 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~-~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~-------~~- 300 (439)
++.+|||||.... .+.+.+++.+ ++++|++||.|+||++|+..+.+.+ +++||+++.+.+.+... ..
T Consensus 22 ~~~iliD~G~~~~---~l~~~l~~~g~~i~~vilTH~H~DH~gg~~~l~~~~-~~~v~~~~~~~~~~~~~~~~~~~~g~~ 97 (207)
T 2zwr_A 22 EGPVLIDPGDEPE---KLLALFQTTGLIPLAILLTHAHFDHVGAVAPLVEAL-DLPVYLHPLDLPLYEGADLAARAWGLA 97 (207)
T ss_dssp TEEEEECCCSCHH---HHHHHHHHHTCCCSCEECSCCCGGGTTTHHHHHHHH-CCCEEECGGGHHHHHTHHHHHHHTTCC
T ss_pred CcEEEEeCCCCHH---HHHHHHHHcCCcccEEEECCCChHHHccHHHHHHHh-CCcEEECHHHHHHHhCchhhhhhcCCC
Confidence 4589999997532 3333333322 4679999999999999999998876 89999999887766421 00
Q ss_pred ----CCCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEECCccEEEEccccccCcccccccCCCCCHHHHHHHHHHHH
Q 013654 301 ----SLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHASTNSLIVGDHCVGQGSAVLDITAGGNMTDYFQSTYKFL 376 (439)
Q Consensus 301 ----~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~~~~iLftGD~l~~~~~~~~~~~~~~~~~~~~~sL~rL~ 376 (439)
......+++|+.+. .++++++||||+|++++++++.++||+||+++....+..+ .+.++..+|++|+++++
T Consensus 98 ~~~~~~~~~~~~~g~~i~----~~~~~~~pGHt~g~~~~~~~~~~~lf~GD~~~~~~~~~~~-~~~~~~~~~~~sl~~l~ 172 (207)
T 2zwr_A 98 IPKPPLPVRPLEEGMRLF----GFQVLHLPGHSPGHVAFYDPEGAQVFSGDLLFRGSVGRYD-LPGADPKALFASLKRLL 172 (207)
T ss_dssp CCCCCSCCEECCTTCEET----TEEEEECCSSSTTCEEEEETTTTEEEEETSEETTEECCSS-STTCCHHHHHHHHHHHT
T ss_pred CCcCCCCceEeCCCCEEE----EEEEEeCCCCCCCcEEEEECCCCEEEEecccCCCCcCCCC-CCCCCHHHHHHHHHHHh
Confidence 11345677888765 5999999999999999999988999999998755333332 24579999999999999
Q ss_pred cCCCC-EEEeCCCCCCC
Q 013654 377 ELSPH-ALIPMHGRVNL 392 (439)
Q Consensus 377 ~l~~~-~IvPgHG~~~~ 392 (439)
+++.+ .|+||||+...
T Consensus 173 ~l~~~~~i~pgHg~~~~ 189 (207)
T 2zwr_A 173 SLPPETRVHPGHGPGTT 189 (207)
T ss_dssp TSCTTCEEEESBSCCEE
T ss_pred cCCCCCEEECCCCCCCc
Confidence 99887 59999999765
No 34
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.91 E-value=3.9e-24 Score=206.39 Aligned_cols=187 Identities=17% Similarity=0.203 Sum_probs=139.1
Q ss_pred CCccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHcCC----Cc
Q 013654 182 LSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLP----RK 257 (439)
Q Consensus 182 ~~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~~----~i 257 (439)
+...++.+|+|++. ....|+|+|..+ ++.+|||||.... .+.+.+.+++.+ ++
T Consensus 21 ~~~~~v~~~v~~ig--------~~~~~~~li~~~--------------~~~iLID~G~~~~-~~~l~~~l~~~g~~~~~i 77 (269)
T 1sml_A 21 MAPLQIADHTWQIG--------TEDLTALLVQTP--------------DGAVLLDGGMPQM-ASHLLDNMKARGVTPRDL 77 (269)
T ss_dssp CCCEEEETTEEECS--------BTTBCCEEEEET--------------TEEEEECCBSGGG-HHHHHHHHHHTTCCGGGE
T ss_pred CCceeEeCCEEEec--------CCCcEEEEEEeC--------------CceEEEECCCCcc-HHHHHHHHHHcCCChHHC
Confidence 44578999999983 123567777653 4589999998643 234444444432 46
Q ss_pred cEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCC-----------CC--CCceecCCCceEEECCeEEEEEe
Q 013654 258 LIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDD-----------WS--LGYTSVSGSEDICVGGQRLTVVF 324 (439)
Q Consensus 258 ~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~-----------~~--~~~~~v~~g~~l~lGg~~l~vi~ 324 (439)
++||+||.|.||+||+..|.+.+ +++||+++.+...+.... +. .....+++|+.+.+|+.++++++
T Consensus 78 ~~IilTH~H~DH~gg~~~l~~~~-~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~ 156 (269)
T 1sml_A 78 RLILLSHAHADHAGPVAELKRRT-GAKVAANAESAVLLARGGSDDLHFGDGITYPPANADRIVMDGEVITVGGIVFTAHF 156 (269)
T ss_dssp EEEECSCCSHHHHTTHHHHHHHS-SCEEEECHHHHHHHHTTTCSBTTTBTSSCCCCCCCSEECCTTCEEEETTEEEEEEE
T ss_pred cEEEeCCCCccccCCHHHHHHhc-CCeEEECHHHHHHHhcCCccccccccccCCCCCCCCeEeCCCCEEEECCEEEEEEE
Confidence 79999999999999999999886 899999999877664321 00 12356889999999999999999
Q ss_pred CCCCCCCCEEEEECC---cc--EEEEccccccCcccccccC-CCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCC
Q 013654 325 SPGHTDGHVALLHAS---TN--SLIVGDHCVGQGSAVLDIT-AGGNMTDYFQSTYKFLELSPHALIPMHGRVNL 392 (439)
Q Consensus 325 tpGHt~g~~~l~~~~---~~--iLftGD~l~~~~~~~~~~~-~~~~~~~~~~sL~rL~~l~~~~IvPgHG~~~~ 392 (439)
+||||+|+++++++. .+ .+++||+++..+....... ...+.++|.+|++++..+++++++||||....
T Consensus 157 ~pGHt~g~~~~~~~~~~~~~~~~l~~gD~l~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~l~~~H~~~~~ 230 (269)
T 1sml_A 157 MAGHTPGSTAWTWTDTRNGKPVRIAYADSLSAPGYQLQGNPRYPHLIEDYRRSFATVRALPCDVLLTPHPGASN 230 (269)
T ss_dssp CCSSSTTCEEEEEEEEETTEEEEEEECCCCCCTTCCCSSCTTCTTHHHHHHHHHHHHHTSCCSEEECSSGGGGT
T ss_pred CCCCCcccEEEEEecccCCceeEEEEeccccCCCcccccCCCCCcCHHHHHHHHHHHHcCCCCEEEeCCCCccc
Confidence 999999999999853 22 6777999875433322111 11247899999999999999999999998654
No 35
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.91 E-value=3.8e-24 Score=223.09 Aligned_cols=156 Identities=24% Similarity=0.325 Sum_probs=122.7
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCC-CccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCCCceecC
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVS 308 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~-~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~~~~~v~ 308 (439)
++++|||||.... .+.+.+++.+ ++++|++||.|.||++|+..|++.+ +++||+++.+...+...........+.
T Consensus 48 ~~~vlID~g~~~~---~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~-~a~v~~~~~~~~~~~~~~~~~~~~~~~ 123 (466)
T 3r2u_A 48 GEAMIIDPIRDLS---SYIRVADEEGLTITHAAETHIHADFASGIRDVAIKL-NANIYVSGESDDTLGYKNMPNHTHFVQ 123 (466)
T ss_dssp CEEEEESCCSCCH---HHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHH-CCEEEEECCSCTTTSCCSCCTTCEEEC
T ss_pred CEEEEEcCCCCHH---HHHHHHHHCCCeeeEEEECCCChhhhccHHHHHHhh-CCeEEECcchhhhhccccCCCCCEEeC
Confidence 4599999997643 2333333322 4679999999999999999999987 899999986544443222222567899
Q ss_pred CCceEEECCeEEEEEeCCCCCCCCEEEEECCcc-------EEEEccccccCcccccccC-----CCC----CHHHHHHHH
Q 013654 309 GSEDICVGGQRLTVVFSPGHTDGHVALLHASTN-------SLIVGDHCVGQGSAVLDIT-----AGG----NMTDYFQST 372 (439)
Q Consensus 309 ~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~~~~-------iLftGD~l~~~~~~~~~~~-----~~~----~~~~~~~sL 372 (439)
+|+++.+|+.++++++|||||+|+++|++++.+ ++|+||+++....+..+.+ ..+ +..++++||
T Consensus 124 ~g~~l~~g~~~l~vi~tPGHT~g~~~~~~~~~~~~~~~~~~lftGD~lf~~~~gr~dl~~~~~~~~g~~~~~~~~~~~Sl 203 (466)
T 3r2u_A 124 HNDDIYVGNIKLKVLHTPGHTPESISFLLTDEGAGAQVPMGLFSGDFIFVGDIGRPDLLEKAVKVEGSSEIGAKQMFKSI 203 (466)
T ss_dssp TTCEEEETTEEEEEEECCSSSTTCEEEEEECGGGTCCSCCEEEEETTBCSSCBCCCCCCCGGGCCTTHHHHHHHHHHHHH
T ss_pred CCCEEEECCEEEEEEECCCCCCCCEEEEEcCCCccCCCceEEEECCcccCCCCCCcCccccccccCCCchHHHHHHHHHH
Confidence 999999999999999999999999999998754 9999999987665555432 112 378999999
Q ss_pred HHHHcCCCCE-EEeCCCC
Q 013654 373 YKFLELSPHA-LIPMHGR 389 (439)
Q Consensus 373 ~rL~~l~~~~-IvPgHG~ 389 (439)
++|..+++++ |+||||.
T Consensus 204 ~kl~~L~~~~~v~PgHg~ 221 (466)
T 3r2u_A 204 ESIKDLPDYIQIWPGHGA 221 (466)
T ss_dssp HHHTTSCTTCEEEESBCT
T ss_pred HHHhcCCCCeEEECCCCC
Confidence 9999999986 9999994
No 36
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=99.84 E-value=1.2e-25 Score=242.63 Aligned_cols=206 Identities=16% Similarity=0.115 Sum_probs=149.4
Q ss_pred CCCccccCCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHc---CCCc
Q 013654 181 TLSYQEYPPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVAS---LPRK 257 (439)
Q Consensus 181 ~~~~~ev~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~---~~~i 257 (439)
.....||.+|||+++ .+...|+|+|..+ ++.+|||||......+.+.+.+.+ ...+
T Consensus 114 ~~~l~eV~~gVy~i~-------g~~~~N~~lI~~~--------------~~~iLIDtG~~~~~a~~~l~~i~~~~~~~~I 172 (668)
T 2yhe_A 114 IAGLFEVMPKLYQVR-------GLDPANMTIIEGD--------------SGLVLIDTLTTAETARAALDLYFQHRPKKPI 172 (668)
Confidence 345688999999994 2445788888653 458999999876433333333333 2356
Q ss_pred cEEEeCCCchhhhcChHHHHHh----CCCCEEEeCHhHHHHh--c----------c--CCC-------------------
Q 013654 258 LIVFVTHHHRDHVDGLSIIQKC----NPDAILLAHENTMRRI--G----------K--DDW------------------- 300 (439)
Q Consensus 258 ~~VilTH~H~DHigG~~~l~~~----~p~a~V~~~~~~~~~l--~----------~--~~~------------------- 300 (439)
++||+||.|+||+||+..|.+. .++++||+|+.+.+.. . . ..+
T Consensus 173 ~~IilTH~H~DH~gG~~~l~~~~~~~~~~a~I~a~~~~~e~~~~e~~~~g~~~~~r~~~~~G~~lp~~~~~~~~~~l~~~ 252 (668)
T 2yhe_A 173 VAVVYSHSHIDHFGGARGIIDEADVKAGKVKVFAPSGFMEHAVSENILAGTAMARRGQYQSGVMVPRGAQAQVDSGLFKT 252 (668)
Confidence 6999999999999999999863 4589999998752211 0 0 000
Q ss_pred ----C-----CCce-ecCCCceEEECCeEEEEEeCCC-CCCCCEEEEECCccEEEEccccccCcccccc---cCCCCCHH
Q 013654 301 ----S-----LGYT-SVSGSEDICVGGQRLTVVFSPG-HTDGHVALLHASTNSLIVGDHCVGQGSAVLD---ITAGGNMT 366 (439)
Q Consensus 301 ----~-----~~~~-~v~~g~~l~lGg~~l~vi~tpG-Ht~g~~~l~~~~~~iLftGD~l~~~~~~~~~---~~~~~~~~ 366 (439)
. .... .+++|+++.+||.+++++++|| ||+|++++++++.++||+||+++.... .+. ..+.++..
T Consensus 253 ~~~~~~~~~~~P~~~~~~dg~~l~lgg~~l~vi~tPG~Htpg~i~~~~p~~~vLftGD~~~~~~~-ni~~~~g~~~~d~~ 331 (668)
T 2yhe_A 253 TATNATNTLVAPNVLIEKPYERHTVDGVELEFQLTLGSEAPSDMNIYLPQFKVLNTADNAPPAMH-NLLTPRGAEVRDAK 331 (668)
Confidence 0 0111 2357899999999999999999 999999999999999999999874432 221 11235888
Q ss_pred HHHHHHHHHHcC---CCCEEEeCCCCCCCChHHHHHHHHHHHHhhh
Q 013654 367 DYFQSTYKFLEL---SPHALIPMHGRVNLWPKHMLCGYLKYERQLF 409 (439)
Q Consensus 367 ~~~~sL~rL~~l---~~~~IvPgHG~~~~~~~~~i~~~L~~~~~~~ 409 (439)
.|++||++++++ ++++++||||+++.+ .+.+.++++++++..
T Consensus 332 ~w~~SL~~l~~l~~~~~~~vvPGHg~p~~g-~~~i~~~l~~~rd~l 376 (668)
T 2yhe_A 332 AWAGYIDASLEKYGDRTDVLIQQHNWPVWG-GDKVRTYLADQRDMY 376 (668)
Confidence 999999999998 788999999987765 455666666666554
No 37
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.90 E-value=7.7e-24 Score=221.05 Aligned_cols=156 Identities=25% Similarity=0.368 Sum_probs=120.6
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCC-CccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCC-CCCCceec
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLP-RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDD-WSLGYTSV 307 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~-~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~-~~~~~~~v 307 (439)
++++|||||.... .+.+.+++.+ ++++||+||.|.||++|+..|++.+ +++||+++.+...+.... .......+
T Consensus 27 ~~~ilID~g~~~~---~~~~~l~~~~~~i~~Il~TH~H~DH~gg~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~ 102 (474)
T 3tp9_A 27 GEACVIDPARDVE---PYLLTAKREGLRIVAALETHIHADFVSGAREMADRA-GAAICVSDEGPPEWKSEYVKAYPHRLL 102 (474)
T ss_dssp CEEEEESCCSCCH---HHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHH-CCEEEEECCSCGGGCCGGGGGSSEEEE
T ss_pred CEEEEEcCCCChH---HHHHHHHHcCCeeEEEEcCcCchhhhCCHHHHHHHH-CCcEEEcCcchhhhcccccccccceEC
Confidence 4599999997743 3333333333 4679999999999999999999886 999999987655543211 11233678
Q ss_pred CCCceEEECCeEEEEEeCCCCCCCCEEEEECCc-------cEEEEccccccCcccccccC-----CCCC----HHHHHHH
Q 013654 308 SGSEDICVGGQRLTVVFSPGHTDGHVALLHAST-------NSLIVGDHCVGQGSAVLDIT-----AGGN----MTDYFQS 371 (439)
Q Consensus 308 ~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~~~-------~iLftGD~l~~~~~~~~~~~-----~~~~----~~~~~~s 371 (439)
++|+.+.+|+.++++++|||||+||++|++++. ++||+||++|....+..+.+ ..++ ..++++|
T Consensus 103 ~~g~~~~~g~~~i~~i~tPGHt~g~~~~~~~~~~~~~~~~~~lftGD~lf~~~~g~~dl~~~~~~~~~~~~~~~~~~~~s 182 (474)
T 3tp9_A 103 KDGDELHFGNVRIVVMHTPGHTPEHVSYLLYDGKTSPDVPMALFSGDFVFVGDVGRPDLLERVAGESGSSEALARQMFRS 182 (474)
T ss_dssp CTTCEEEETTEEEEEEECCSSSSSCEEEEEEETTTEEEEEEEEEEETSEETTEECCSCHHHHHSCCTTHHHHHHHHHHHH
T ss_pred CCCCEEEECCEEEEEEECCCCCCCCEEEEEecCCCCCCCceEEEeCCccccCCCCCCCCCccccCCCccchHHHHHHHHH
Confidence 999999999999999999999999999999654 69999999987655543321 1222 6899999
Q ss_pred HHHHHcCCCCE-EEeCCCC
Q 013654 372 TYKFLELSPHA-LIPMHGR 389 (439)
Q Consensus 372 L~rL~~l~~~~-IvPgHG~ 389 (439)
|++|..++.++ |+||||.
T Consensus 183 l~~l~~l~~~~~v~PgHg~ 201 (474)
T 3tp9_A 183 LRKFEALPDHVQVLPAHGA 201 (474)
T ss_dssp HHHHHTSCTTCEEEESBCT
T ss_pred HHHHhcCCCCcEEECCCCC
Confidence 99999999887 7899994
No 38
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.90 E-value=5.2e-23 Score=196.94 Aligned_cols=181 Identities=20% Similarity=0.300 Sum_probs=132.1
Q ss_pred CCceEEEEcCCCCCCCcccccEEEEccCCCCCCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCch
Q 013654 188 PPGVILVPMQSRTAKPFLTTNLIVFAPDSVSDDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHR 267 (439)
Q Consensus 188 ~~Gv~~i~~~~~~~~p~~~~N~y~i~~~~g~~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~ 267 (439)
.++++.+....+ ......|+|++..+ ++.+|||||...... .+ .. ..++++||+||.|.
T Consensus 3 ~~~i~~i~~~~~--g~~~~~~~~li~~~--------------~~~iLiD~G~~~~~~-~l---~~-~~~i~~vi~TH~H~ 61 (261)
T 3adr_A 3 CRGLHSIPAGPV--EFPEIATVYVMCGE--------------KLTVMIDAGVSNSIA-DF---SF-LDKLDYIVLTHLHI 61 (261)
T ss_dssp CCEEEEEECSCT--TCGGGSEEEEEECS--------------SCEEEECCCCTTCCC-CC---TT-CSCCCEEECSCCSG
T ss_pred CCCeEEEeccCC--CCCCceEEEEEEcC--------------CcEEEEeCCCCCChh-hc---CC-CCCCcEEEECCCCc
Confidence 366777765421 12234566666432 458999999875321 11 11 45677999999999
Q ss_pred hhhcChHHHHHhCCCCEEEeCHhHHHHhcc--------------------------CCCC-CCceecCCCceEEECCeEE
Q 013654 268 DHVDGLSIIQKCNPDAILLAHENTMRRIGK--------------------------DDWS-LGYTSVSGSEDICVGGQRL 320 (439)
Q Consensus 268 DHigG~~~l~~~~p~a~V~~~~~~~~~l~~--------------------------~~~~-~~~~~v~~g~~l~lGg~~l 320 (439)
||++|+..+.+.+ +++||+++.+.+.+.. .... .....+++|+.+.+|+.++
T Consensus 62 DH~gg~~~l~~~~-~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i 140 (261)
T 3adr_A 62 DHIGLLPELLQVY-KAKVLVKSGFKKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRM 140 (261)
T ss_dssp GGTTTHHHHHHHS-CCEEEEETTCTHHHHSHHHHHHHHHHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECSSSEE
T ss_pred cccCCHHHHHHHh-CCeEEECHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcccccCCCccceEecCCCCEEEECCEEE
Confidence 9999999999887 8999998765433221 0111 1235688999999999999
Q ss_pred EEEeCCCCCCCCEEEEECCccEEEEccccccCcccc--cccCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCC
Q 013654 321 TVVFSPGHTDGHVALLHASTNSLIVGDHCVGQGSAV--LDITAGGNMTDYFQSTYKFLELSPHALIPMHGRVNL 392 (439)
Q Consensus 321 ~vi~tpGHt~g~~~l~~~~~~iLftGD~l~~~~~~~--~~~~~~~~~~~~~~sL~rL~~l~~~~IvPgHG~~~~ 392 (439)
+++++||||+|+++++. .++||+||+++...... ....+..+..+|.++++++.++++++++||||++..
T Consensus 141 ~~~~~pGHt~~~~~~~~--~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~v~~~H~~~~~ 212 (261)
T 3adr_A 141 RLIYTPGHARHHMSVLV--DDFLFTGDSAGAYFNGVVIPTTPPVIDYKMYMESLKRQIELKPKVVGFAHGGLVS 212 (261)
T ss_dssp EEEECTTSCTTCEEEEE--TTEEEEETSSCEEETTEEECCCCSCCCHHHHHHHHHHHHHTCCSEEEETTTEEEC
T ss_pred EEEECCCCCCccEEEEE--CCEEEEcCcccccccccccCCCCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCccC
Confidence 99999999999999976 48999999976432111 122244789999999999999999999999999766
No 39
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.88 E-value=7.3e-23 Score=195.50 Aligned_cols=155 Identities=17% Similarity=0.203 Sum_probs=114.3
Q ss_pred CCeEEEcCCCCCc--------------------------HHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhCCCC
Q 013654 230 GEALIVDPGCRSE--------------------------FHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDA 283 (439)
Q Consensus 230 g~~vLID~G~~~~--------------------------~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~p~a 283 (439)
++.+|||||.+.. +.+.+.+......++++||+||.|+||++|+..| +++
T Consensus 48 ~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~l~~~g~~~~~I~~VilTH~H~DH~gg~~~~----~~~ 123 (254)
T 3dha_A 48 EGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDHAGGNGAF----TNT 123 (254)
T ss_dssp TEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGGGSHHHHHHHHTCCGGGCSEEECSCCSHHHHTTGGGC----SSS
T ss_pred CccEEEECCCChhhhcccccccccccccccccccCchhhHHHHHHHcCCCHHHCCEEEcCCChhhcCCChHHC----CCC
Confidence 4589999998632 3344444433334578999999999999999877 589
Q ss_pred EEEeCHhHHHHhccCC-------CCCCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEECCc---cEEEEccccccCc
Q 013654 284 ILLAHENTMRRIGKDD-------WSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHAST---NSLIVGDHCVGQG 353 (439)
Q Consensus 284 ~V~~~~~~~~~l~~~~-------~~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~~~---~iLftGD~l~~~~ 353 (439)
+||+++.+.+.+.... .......+.+++...+++ ++++++||||+|+++++++.. ++||+||+++...
T Consensus 124 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~pGHt~g~~~~~~~~~~~~~vl~~GD~~~~~~ 201 (254)
T 3dha_A 124 PIIVQRTEYEAALHREEYMKECILPHLNYKIIEGDYEVVPG--VQLLYTPGHSPGHQSLFIETEQSGSVLLTIDASYTKE 201 (254)
T ss_dssp CEEEEHHHHHHHHHCTTSCGGGSCTTSCEEEECSSEEEETT--EEEEECCSSSTTCEEEEEEETTTEEEEEEETTCSSHH
T ss_pred EEEECHHHHHHhhccccccccccCcccceEEecCCccccCC--EEEEECCCCCCCCEEEEEEeCCCCEEEEEecccchhh
Confidence 9999998877663221 111223345566666777 889999999999999999743 7999999987543
Q ss_pred ccccc-cCCCCCHHHHHHHHHHHHcCCCC---EEEeCCCCC
Q 013654 354 SAVLD-ITAGGNMTDYFQSTYKFLELSPH---ALIPMHGRV 390 (439)
Q Consensus 354 ~~~~~-~~~~~~~~~~~~sL~rL~~l~~~---~IvPgHG~~ 390 (439)
..... ..+..+.+++++|+++|.++..+ .|+||||+.
T Consensus 202 ~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~~~~v~pgHg~~ 242 (254)
T 3dha_A 202 NFEDEVPFAGFDPELALSSIKRLKEVVKKEKPIIFFGHDIE 242 (254)
T ss_dssp HHHSCCCCSCSCHHHHHHHHHHHHHHHHHHCCEEEESSCHH
T ss_pred hcccCCCcCcCCHHHHHHHHHHHHHHHHhcCCEEEeCCCHH
Confidence 22221 12457999999999999988654 899999973
No 40
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.86 E-value=9e-22 Score=191.13 Aligned_cols=160 Identities=14% Similarity=0.109 Sum_probs=114.5
Q ss_pred CCeEEEcCCCCCc-----------------HHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHH--hCCCCEEEeCHh
Q 013654 230 GEALIVDPGCRSE-----------------FHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQK--CNPDAILLAHEN 290 (439)
Q Consensus 230 g~~vLID~G~~~~-----------------~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~--~~p~a~V~~~~~ 290 (439)
++.+|||||.+.. +...+.+......++++||+||.|.||+||+..+.+ .+|+++||+++.
T Consensus 57 ~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~~~fp~a~i~~~~~ 136 (280)
T 3esh_A 57 QYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQD 136 (280)
T ss_dssp SCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSCCSSTTCEEEEEHH
T ss_pred CEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCcccccccccCCCCCEEEECHH
Confidence 5699999998752 333333333334467799999999999999999887 678999999999
Q ss_pred HHHHhccCCCC--------------CCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEEC--CccEEEEccccccCcc
Q 013654 291 TMRRIGKDDWS--------------LGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA--STNSLIVGDHCVGQGS 354 (439)
Q Consensus 291 ~~~~l~~~~~~--------------~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~--~~~iLftGD~l~~~~~ 354 (439)
+...+...... .....+.++.. +++ .++++++||||+||++++++ +.++||+||+++....
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~-gi~~~~~pGHt~g~~~~~i~~~~~~vlftGD~~~~~~~ 213 (280)
T 3esh_A 137 EWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFE--PVP-GIKMQHSGGHSFGHTIITIESQGDKAVHMGDIFPTTAH 213 (280)
T ss_dssp HHHHHHSCCTTGGGTSCGGGCCGGGGGEEEESSEEC--SST-TEEEEECCSSSTTCEEEEEEETTEEEEECGGGSCSGGG
T ss_pred HHHHhhCcccccccchhhhhhhhhhheEEEeCCCCe--EcC-CEEEEEcCCCCcccEEEEEEECCcEEEEEEccCCchhh
Confidence 88876543211 11123344433 322 38889999999999999994 5679999999986655
Q ss_pred cccccC--CCCCHHHHHHHHHHHHcC---CCCEEEeCCCCCCC
Q 013654 355 AVLDIT--AGGNMTDYFQSTYKFLEL---SPHALIPMHGRVNL 392 (439)
Q Consensus 355 ~~~~~~--~~~~~~~~~~sL~rL~~l---~~~~IvPgHG~~~~ 392 (439)
...+.. .+.+..+..++.+++..+ +...|+||||+...
T Consensus 214 ~~~d~~~~~d~d~~~~~~s~~~ll~~~~~~~~~v~pgH~~~~~ 256 (280)
T 3esh_A 214 KNPLWVTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYF 256 (280)
T ss_dssp CSTTCCCTTCSCHHHHHHHHHHHHHHHHHTTCEEECSSCSSEE
T ss_pred cCCCccccccCCHHHHHHHHHHHHHHHHhCCCEEEEEccCCCc
Confidence 443332 245788888888887764 45579999999654
No 41
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.85 E-value=1.6e-21 Score=188.32 Aligned_cols=154 Identities=20% Similarity=0.271 Sum_probs=109.6
Q ss_pred CCeEEEcCCCCCcH--------------HHHHHHHHHcC----CCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhH
Q 013654 230 GEALIVDPGCRSEF--------------HEELLKVVASL----PRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENT 291 (439)
Q Consensus 230 g~~vLID~G~~~~~--------------~~~l~~~~~~~----~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~ 291 (439)
++.+|||||.+... .+.+.+.+++. .++++||+||.|+||+||+..| ++++||+++.+
T Consensus 44 ~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~----~~a~v~~~~~~ 119 (274)
T 3aj3_A 44 EGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGLLGLEPRDIDVVVNSHFHFDHCGGNKYF----PHAKKICHRSE 119 (274)
T ss_dssp TEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHHTTCCGGGCCEEECSCCSGGGTTTGGGC----TTSEEEEETTH
T ss_pred CccEEEECCCCcccccCccccCCcccCccccHHHHHHHcCCCHHHCCEEEecCcCcccCCchhhC----CCCEEEECHHH
Confidence 45899999987532 12233333333 3577999999999999999887 68999999888
Q ss_pred HHHhccCC-----------C---------------------CCCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEEC-
Q 013654 292 MRRIGKDD-----------W---------------------SLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA- 338 (439)
Q Consensus 292 ~~~l~~~~-----------~---------------------~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~- 338 (439)
.+.+.... + ......+++ .++++| +++++++||||+|+++++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~g-~~~v~~~pGHt~g~~~~~~~~ 196 (274)
T 3aj3_A 120 VPQACNPQPFEHLGYSDLSFSAEAAEARGATAQLLEGTTRANSTFEGIDG--DVDLAR-GVKLISTPGHSIGHYSLLVEF 196 (274)
T ss_dssp HHHHHSCCGGGTTTTCCCTTCHHHHHHHTCGGGCCTTCCSTTSCEEEECS--SEEEET-TEEEEECTTSSTTCEEEEECC
T ss_pred HHHHhCcCCccccccChhhhccccccccccccccccccccCCCCceEcCC--ccccCC-EEEEEECCCCCceeeEEEEEC
Confidence 76553211 0 112233442 466777 89999999999999999997
Q ss_pred --CccEEEEccccccCcccccccC--CCCCHHHHHHHHHHHHcCCCC---EEEeCCCCC
Q 013654 339 --STNSLIVGDHCVGQGSAVLDIT--AGGNMTDYFQSTYKFLELSPH---ALIPMHGRV 390 (439)
Q Consensus 339 --~~~iLftGD~l~~~~~~~~~~~--~~~~~~~~~~sL~rL~~l~~~---~IvPgHG~~ 390 (439)
+.++||+||+++.......... ...+..+|.+|+++++++..+ .|+||||+.
T Consensus 197 ~~~~~~lf~GD~~~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~~~~i~pgH~~~ 255 (274)
T 3aj3_A 197 PRRKPILFTIDAAYTQKSLETLCQAAFHIDPVAGVNSMRKVKKLAEDHGAELMYSHDMD 255 (274)
T ss_dssp SSSCCEEEEETTCSSHHHHHHTCCCSCCSCHHHHHHHHHHHHHHHHHHTCEEEESSCHH
T ss_pred CCCCEEEEEechhhhHHHhcCCCCCceecCHHHHHHHHHHHHHHHhcCCCEEEecCCHH
Confidence 4689999998764321111111 236889999999999887543 799999974
No 42
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.84 E-value=1.5e-21 Score=183.38 Aligned_cols=148 Identities=21% Similarity=0.217 Sum_probs=106.0
Q ss_pred CCeEEEcCCCCCc---HHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHH-hccC-------
Q 013654 230 GEALIVDPGCRSE---FHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRR-IGKD------- 298 (439)
Q Consensus 230 g~~vLID~G~~~~---~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~-l~~~------- 298 (439)
++.+|||||.... +.+.+.+......++++||+||.|.||++|+..| ++++||+++..... +...
T Consensus 44 ~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~ViiTH~H~DH~gg~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~ 119 (221)
T 1ztc_A 44 DRRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIFNSVLF----ENATFYVHEVYKTKNYLSFGTIVGRI 119 (221)
T ss_dssp TEEEEECCCCGGGHHHHHHHHHHHTCCGGGCCEEECSCCCHHHHGGGGGC----TTCEEEEEGGGGGSCGGGGCHHHHHH
T ss_pred CeEEEEECCCCcchHHHHHHHHHcCCCHHHCcEEEEcCCccccCCchhhC----CCCEEEEeHHHhhhhhhhhccchhhh
Confidence 4589999998632 2233333222233567999999999999999887 37899998872110 0000
Q ss_pred -----CCCCCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEECCc---cEEEEccccccCcccccccCCCCCHHHHHH
Q 013654 299 -----DWSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHAST---NSLIVGDHCVGQGSAVLDITAGGNMTDYFQ 370 (439)
Q Consensus 299 -----~~~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~~~---~iLftGD~l~~~~~~~~~~~~~~~~~~~~~ 370 (439)
........+++|+.+. ++ .++++++||||+|+++++++.. +++|+||+++.... ..+..+|++
T Consensus 120 ~~~~~~~~~~~~~~~~g~~l~-~~-~~~v~~~pGHt~g~~~~~~~~~~~~~vlftGD~~~~~~~-------~~d~~~~~~ 190 (221)
T 1ztc_A 120 YSKVISSWKNVVLLKGEESLF-DE-KVKVFHTPWHAREHLSFLLDTENAGRVLITGDITPNRLS-------YYDIIKGYG 190 (221)
T ss_dssp HHHHHHTCCSEEEECSCCEET-TT-TEEEEECCSSSTTCEEEEEEETTTEEEEECGGGSCSHHH-------HHHHHHTCS
T ss_pred hhhccccccceEEeCCCCEEE-CC-eEEEEEcCCCCcccEEEEEEcCCCCeEEEEeCccccccc-------CCCHHHHHh
Confidence 0012345677888774 43 6999999999999999998653 79999999864432 236778888
Q ss_pred H------HHHHHcCCCCEEEeCCCCCCC
Q 013654 371 S------TYKFLELSPHALIPMHGRVNL 392 (439)
Q Consensus 371 s------L~rL~~l~~~~IvPgHG~~~~ 392 (439)
| |++ +++ .+.|+||||+++.
T Consensus 191 s~~~~~~l~~-~~l-~~~i~pgHg~~~~ 216 (221)
T 1ztc_A 191 SVQVKNFLDR-VGR-IDLLVFPHDAPLK 216 (221)
T ss_dssp CHHHHHHHHH-HCC-CSEEECSSSCCBC
T ss_pred hhHhHHHHHh-ccC-CCEEEeCCCchHh
Confidence 8 999 888 8899999999765
No 43
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.84 E-value=3.2e-21 Score=192.32 Aligned_cols=160 Identities=19% Similarity=0.231 Sum_probs=114.9
Q ss_pred CCeEEEcCCCCC-------cHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHH-HHhCCCCEEEeCHhHHHHhccCC--
Q 013654 230 GEALIVDPGCRS-------EFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSII-QKCNPDAILLAHENTMRRIGKDD-- 299 (439)
Q Consensus 230 g~~vLID~G~~~-------~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l-~~~~p~a~V~~~~~~~~~l~~~~-- 299 (439)
++.+|||||.+. .+.+.+.+......++++||+||.|.||+||+..+ ...+|+++||+++.+.+.+....
T Consensus 106 ~~~iLIDtG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~~~~fp~a~v~~~~~~~~~~~~~~~~ 185 (331)
T 1p9e_A 106 SKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQLAFPNAVVRADQKEADFWLSQTNL 185 (331)
T ss_dssp SCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTEESSTTCEEECBHHHHHHHSCHHHH
T ss_pred CEEEEEECCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCcccccccccCCCCEEEECHHHHHHHhCchhh
Confidence 458999999873 24444444333344678999999999999999843 33568999999999877654310
Q ss_pred --C---------------------CCCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEEC--CccEEEEccccccCc-
Q 013654 300 --W---------------------SLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA--STNSLIVGDHCVGQG- 353 (439)
Q Consensus 300 --~---------------------~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~--~~~iLftGD~l~~~~- 353 (439)
. ......+++|+.+..| ++++++||||+||++++++ +.+++|+||+++...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~g---i~vi~tpGHtpG~~~~~i~~~~~~vlf~GD~~~~~~~ 262 (331)
T 1p9e_A 186 DKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLVPG---IKALASHGHTPGHTTYVVESQGQKLALLGDLILVAAV 262 (331)
T ss_dssp TTCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSSEECSTT---EEEEECTTSSTTCEEEEEEETTEEEEECTTSCCCHHH
T ss_pred ccCchhhhhHHHHHHHHHhhhhcccCceEEeCCCCEEccc---EEEEEcCCCChhCEEEEEEECCcEEEEEECccCcchh
Confidence 0 1123456677766543 9999999999999999996 578999999986431
Q ss_pred ---ccccccCCCCCHHHHHHHHHHHHcC---CCCEEEeCCCCCCC
Q 013654 354 ---SAVLDITAGGNMTDYFQSTYKFLEL---SPHALIPMHGRVNL 392 (439)
Q Consensus 354 ---~~~~~~~~~~~~~~~~~sL~rL~~l---~~~~IvPgHG~~~~ 392 (439)
.+.+....+.+..++++|++++.+. +...|+|||++...
T Consensus 263 ~~~~p~~~~~~d~d~~~~~~s~~~ll~~~~~~~~~v~~~H~~~~~ 307 (331)
T 1p9e_A 263 QFDDPSVTTQLDSDSKSVAVERKKAFADAAKGGYLIAASHLSFPG 307 (331)
T ss_dssp HTTCTTCCBTTCSSHHHHHHHHHHHHHHHHHHTCEEECTTSSTTC
T ss_pred cccCCCceecccCCHHHHHHHHHHHHHHHhcCCCEEEEECCCCCc
Confidence 1222222457899999999988764 45679999997543
No 44
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.83 E-value=1.2e-20 Score=182.02 Aligned_cols=155 Identities=18% Similarity=0.259 Sum_probs=112.1
Q ss_pred CCeEEEcCCCCCcH-------------------------HHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhCCCCE
Q 013654 230 GEALIVDPGCRSEF-------------------------HEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAI 284 (439)
Q Consensus 230 g~~vLID~G~~~~~-------------------------~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~ 284 (439)
++.+|||||.+... .+.+.+......++++||+||.|+||+||+..| ++++
T Consensus 52 ~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~----~~~~ 127 (276)
T 2r2d_A 52 DATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYF----GKSR 127 (276)
T ss_dssp SCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTTGGGC----SSSE
T ss_pred CCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCCHHHCCEEEecCcccccCCChhhC----CCCE
Confidence 45899999987542 223333222233577999999999999999987 6999
Q ss_pred EEeCHhHHHHhccC--------CC-----------CCCceecC-CCceEEECCeEEEEEeC-CCCCCCCEEEEEC--C-c
Q 013654 285 LLAHENTMRRIGKD--------DW-----------SLGYTSVS-GSEDICVGGQRLTVVFS-PGHTDGHVALLHA--S-T 340 (439)
Q Consensus 285 V~~~~~~~~~l~~~--------~~-----------~~~~~~v~-~g~~l~lGg~~l~vi~t-pGHt~g~~~l~~~--~-~ 340 (439)
||+++.+.+.+... .+ ......++ +|+.+++++ .++++++ ||||+|+++++++ + .
T Consensus 128 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~-~~~v~~~~pgHt~g~~~~~~~~~~~~ 206 (276)
T 2r2d_A 128 LIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAP-GVNLLNFGTGHASGMLGLAVRLEKQP 206 (276)
T ss_dssp EEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEET-TEEEEEEESSSSSSEEEEEEECSSSC
T ss_pred EEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCCCceeEecC-CEEEEeCCCCCCceeEEEEEEcCCCc
Confidence 99999886654211 00 12344566 478899874 2899999 9999999999996 3 6
Q ss_pred cEEEEccccccCccc-c--cccCCCCCHHHHHHHHHHHHcC---CCCEEEeCCCC
Q 013654 341 NSLIVGDHCVGQGSA-V--LDITAGGNMTDYFQSTYKFLEL---SPHALIPMHGR 389 (439)
Q Consensus 341 ~iLftGD~l~~~~~~-~--~~~~~~~~~~~~~~sL~rL~~l---~~~~IvPgHG~ 389 (439)
+++|+||+++..... . .......+..++.+|++++.++ ....|+||||+
T Consensus 207 ~vl~~GD~~~~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~l~~~~~~~v~~~H~~ 261 (276)
T 2r2d_A 207 GFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDR 261 (276)
T ss_dssp EEEEEETTSCCHHHHSSSCCCCSSCSCHHHHHHHHHHHHHHHHHTTCEEEESSCH
T ss_pred eEEEEechhhhHHHhcccCCCCccccCHHHHHHHHHHHHHHHhcCCCEEEeCCCH
Confidence 899999998654211 1 1111245789999999999987 45689999987
No 45
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.65 E-value=8.5e-16 Score=147.72 Aligned_cols=159 Identities=14% Similarity=0.102 Sum_probs=110.2
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHh----------CCCCEEEeCHhHHHHhccCC
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKC----------NPDAILLAHENTMRRIGKDD 299 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~----------~p~a~V~~~~~~~~~l~~~~ 299 (439)
++.+|||||.+.. ..+.+. ....++++||+||.|.||++|+..+.+. .++++||+++.+.+.+....
T Consensus 52 ~~~iLiD~G~~~~--~~l~~~-~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~ 128 (268)
T 1zkp_A 52 GFRLLVDCGSGVL--AQLQKY-ITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLT 128 (268)
T ss_dssp TEEEEECCCTTHH--HHHTTT-CCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSSSHHHHHTTC
T ss_pred CcEEEEECCHHHH--HHHHHh-CCcccCCEEEEecCCchhhCCHHHHHHHHHhcccccCCCCceEEEeCccHHHHHHhcc
Confidence 4589999998732 333332 2334567999999999999999988653 24689999998877775533
Q ss_pred CC--CCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEEC--CccEEEEccccccCcccc--------c-ccCC-C---
Q 013654 300 WS--LGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA--STNSLIVGDHCVGQGSAV--------L-DITA-G--- 362 (439)
Q Consensus 300 ~~--~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~--~~~iLftGD~l~~~~~~~--------~-~~~~-~--- 362 (439)
+. .....+++|+.+++|+.++++++++ |++|+++|+++ +.+++|+||+.+...... + .... .
T Consensus 129 ~~~~~~~~~~~~g~~~~~g~~~v~~~~~~-H~~~~~~~~i~~~~~~i~~~GD~~~~~~~~~~~~~~d~li~e~~~~~~~~ 207 (268)
T 1zkp_A 129 HEPHTKGIPYNPEETLQIGPFSISFLKTV-HPVTCFAMRITAGNDIVVYSADSSYIPEFIPFTKDADLFICECNMYAHQE 207 (268)
T ss_dssp BTTTEEEEECCTTSCEEETTEEEEEEECC-SSSCCEEEEEEETTEEEEECCSCCCCTTHHHHHTTCSEEEEECCBCTTSC
T ss_pred cCCccceEEecCCCeEEECCEEEEEEECC-CCCCceEEEEEECCeEEEEeCCCCCCHHHHHHHcCCCEEEEECCCCcccc
Confidence 21 2345788899999999999999998 99999999985 357999999975432110 0 0000 0
Q ss_pred ---CCHHHHHHHHHHHHcCCCCEEEeCCCCCCC
Q 013654 363 ---GNMTDYFQSTYKFLELSPHALIPMHGRVNL 392 (439)
Q Consensus 363 ---~~~~~~~~sL~rL~~l~~~~IvPgHG~~~~ 392 (439)
.....+.++++.++..+++.+++.|-....
T Consensus 208 ~~~~~H~~~~~a~~~~~~~~~~~lil~H~~~~~ 240 (268)
T 1zkp_A 208 AAKAGHMNSTEVASIAKDANVKELLLTHLPHTG 240 (268)
T ss_dssp CGGGTCCBHHHHHHHHHHTTCSEEEEESBCSSS
T ss_pred ccCCCCCCHHHHHHHHHHcCCCEEEEECCCCCC
Confidence 001123344555566788899999977544
No 46
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.57 E-value=4.1e-15 Score=157.93 Aligned_cols=130 Identities=12% Similarity=0.211 Sum_probs=98.5
Q ss_pred CCceEEEe--cCCeEEEcCCCCCcHH---------HHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCH
Q 013654 221 CGNHRFVA--QGEALIVDPGCRSEFH---------EELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHE 289 (439)
Q Consensus 221 ~~~s~~vi--~g~~vLID~G~~~~~~---------~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~ 289 (439)
.+.|+|++ .++.+|||||...... ..+..+.....++++||+||.|.||+||+..+.+.+ +++||+++
T Consensus 20 iG~n~~li~~~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~l~~~~-~~pIy~t~ 98 (555)
T 3zq4_A 20 IGKNTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPYLLRQV-NIPVYGGK 98 (555)
T ss_dssp SSCCEEEEEETTEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHHHHTTC-CCCEEECH
T ss_pred cCCEEEEEEECCeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHHHHHhc-CceEEECH
Confidence 34444443 3558999999742110 012333345567789999999999999999999886 88999999
Q ss_pred hHHHHhccC----C--CCCCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEE--CCccEEEEcccccc
Q 013654 290 NTMRRIGKD----D--WSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLH--ASTNSLIVGDHCVG 351 (439)
Q Consensus 290 ~~~~~l~~~----~--~~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~--~~~~iLftGD~l~~ 351 (439)
.+...+... . .......+..|+.+.+|+.+++++++++|++|++++++ ++.+++||||+.+.
T Consensus 99 ~t~~ll~~~l~~~~~~~~~~~~~v~~g~~~~ig~~~v~~~~~~H~~pgs~~~~i~~~~~~il~tGD~~~~ 168 (555)
T 3zq4_A 99 LAIGLLRNKLEEHGLLRQTKLNIIGEDDIVKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFD 168 (555)
T ss_dssp HHHHHHHHHHHHHSTTTTCCEEECCTTCCEEETTEEEEEEEEBCSSSSEEEEEEEETTEEEEECCSCBCC
T ss_pred HHHHHHHHHHHHcCccCCCceEEeCCCCEEEECCEEEEEEeCCCCCcCcEEEEEEECCcEEEEeCCCCCC
Confidence 887655321 1 12356788999999999999999999999999988877 66789999999764
No 47
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.52 E-value=6.9e-15 Score=139.21 Aligned_cols=74 Identities=12% Similarity=0.134 Sum_probs=67.6
Q ss_pred chhhHHHHHHHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC-----cccccccccccCHHHHHHHHHhc
Q 013654 77 DIESALNQILEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCINCLAEV 151 (439)
Q Consensus 77 ~~~~~l~~~l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~-----~~~e~~~~~W~~~~~al~~~~~~ 151 (439)
+...+|.++|+++|+.++.+.|.+|+|||||+ +.+|||||+||++.+|.. +.+|...+.|++|+++++.+.++
T Consensus 115 ~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~--~~~rRfdT~FFla~lpq~~~v~~d~~E~~~~~W~~p~eal~~~~~G 192 (232)
T 3qsj_A 115 KGGDALSAWLSARGLAFDLGLLRRIGRFVTPP--TQPVRFDTRFFLCVGQHLGEPRLHGAELDAALWTPARDMLTRIQSG 192 (232)
T ss_dssp TCTTHHHHHHHTTTCEEBGGGCEEEEEEECCT--TSSSEEEEEEEEEECSSCCCCCCCSSSEEEEEEEEHHHHHHHHHTT
T ss_pred cCchhHHHHHHHCCCccChhhceeeEEEcCCc--CCceeEEEEEEEEECCCCCCCCCCCCceEEEEEEcHHHHHHHHHcC
Confidence 34568999999999999999999999999999 889999999999999854 55899999999999999999987
Q ss_pred C
Q 013654 152 K 152 (439)
Q Consensus 152 ~ 152 (439)
+
T Consensus 193 ~ 193 (232)
T 3qsj_A 193 E 193 (232)
T ss_dssp S
T ss_pred C
Confidence 5
No 48
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.51 E-value=9.7e-14 Score=143.07 Aligned_cols=163 Identities=18% Similarity=0.185 Sum_probs=109.5
Q ss_pred ceEEEe--cCCeEEEcCCCCCcHHHHHHHHHH----cCCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhc
Q 013654 223 NHRFVA--QGEALIVDPGCRSEFHEELLKVVA----SLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIG 296 (439)
Q Consensus 223 ~s~~vi--~g~~vLID~G~~~~~~~~l~~~~~----~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~ 296 (439)
+++|++ .++.+|||||..... ....... ...++++||+||.|.||+||+..+.+..++++||+++.+.+.+.
T Consensus 14 ~s~~li~~~~~~iLID~G~~~~~--~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~~~~~~Iy~t~~t~~l~~ 91 (431)
T 3iek_A 14 GSAHLLLAGGRRVLLDCGMFQGK--EEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVYATRATVLLME 91 (431)
T ss_dssp CCCEEEEETTEEEEECCCCCCGG--GGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHTTCCSCEEECHHHHHHHH
T ss_pred CcEEEEEECCeEEEEeCCCCcch--hhccchhhcCCCcccCCEEEECCCChHHhccHHHHHHcCCCCeEEEcHHHHHHHH
Confidence 344444 355899999985432 1111111 22356799999999999999999988766899999998876543
Q ss_pred cC--------C---CC--------CCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEEC--CccEEEEccccccCccc
Q 013654 297 KD--------D---WS--------LGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA--STNSLIVGDHCVGQGSA 355 (439)
Q Consensus 297 ~~--------~---~~--------~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~--~~~iLftGD~l~~~~~~ 355 (439)
.. . +. .....+..++.+++++.+++++++ ||++|++++++. +.+++|+||+-......
T Consensus 92 ~~l~d~~~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~l~g~~v~~~~a-gH~~Gs~~~~i~~~~~~ilfsGD~~~~~~~~ 170 (431)
T 3iek_A 92 IVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQA-GHLPGSAFVVAQGEGRTLVYSGDLGNREKDV 170 (431)
T ss_dssp HHHHHHHHHCSSCSSCHHHHHHHHHTEEECCTTCCEEETTEEEEEEEC-CSSTTCEEEEEEETTEEEEECCCCCCTTSSS
T ss_pred HHHHHHHhhcccCCCCHHHHHHHHhccEEcCCCCeEEeCCEEEEEEeC-CCCcCceEEEEEECCEEEEEeCCCCCCCCcc
Confidence 10 0 00 235678899999999999998875 999999999984 45799999985422111
Q ss_pred c----c---------c----cCCCCC----HHHHHHHHHHHHcCCCCEEEeCCC
Q 013654 356 V----L---------D----ITAGGN----MTDYFQSTYKFLELSPHALIPMHG 388 (439)
Q Consensus 356 ~----~---------~----~~~~~~----~~~~~~sL~rL~~l~~~~IvPgHG 388 (439)
. . . .....+ .+++.+.+++..+....+++|.+-
T Consensus 171 l~~~~~~~~~D~LI~EsTy~~~~h~~~~~~~~~l~~~i~~~~~~gg~vlIp~fa 224 (431)
T 3iek_A 171 LPDPSLPPLADLVLAEGTYGDRPHRPYRETVREFLEILEKTLSQGGKVLIPTFA 224 (431)
T ss_dssp SCCCCBCCCCSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred cCCccccCCccEEEEEcccCCcCCCChHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 0 0 0 001112 334455666665667788999987
No 49
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.49 E-value=2.7e-14 Score=151.99 Aligned_cols=128 Identities=15% Similarity=0.149 Sum_probs=96.0
Q ss_pred ceEEEe--cCCeEEEcCCCCCcHH---------HHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhCC----CCEEEe
Q 013654 223 NHRFVA--QGEALIVDPGCRSEFH---------EELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNP----DAILLA 287 (439)
Q Consensus 223 ~s~~vi--~g~~vLID~G~~~~~~---------~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~p----~a~V~~ 287 (439)
+|+|++ .++.+|||||...... ..+..+.....++++||+||.|.||+||+..+.+.++ +++||+
T Consensus 30 ~n~~li~~~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHiggl~~L~~~~~~~~~~~pIy~ 109 (562)
T 3bk2_A 30 KNITVFRFRDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGLPFLLPMIFGKESPVPIYG 109 (562)
T ss_dssp CCEEEEEETTEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTHHHHHHHHHCSCCCSEEEE
T ss_pred CCEEEEEECCeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhCCHHHHHHhhccccCCceEEe
Confidence 444444 3558999999642100 1122233345567899999999999999999988764 799999
Q ss_pred CHhHHHHhcc----CCC---CCCceecCCCceEEECC-eEEEEEeCCCCCCCCEEEEE--CCccEEEEccccc
Q 013654 288 HENTMRRIGK----DDW---SLGYTSVSGSEDICVGG-QRLTVVFSPGHTDGHVALLH--ASTNSLIVGDHCV 350 (439)
Q Consensus 288 ~~~~~~~l~~----~~~---~~~~~~v~~g~~l~lGg-~~l~vi~tpGHt~g~~~l~~--~~~~iLftGD~l~ 350 (439)
++.+.+.+.. ... ......++.|+.+++|+ .+++++++++|++|++++++ ++.+++||||+.+
T Consensus 110 ~~~t~~~l~~~l~~~~~~~~~~~~~~v~~g~~~~lg~~~~v~~~~~~H~~~gs~~~~i~~~~~~il~tGD~~~ 182 (562)
T 3bk2_A 110 ARLTLGLLRGKLEEFGLRPGAFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGVVIRTPIGTIVHTGDFKL 182 (562)
T ss_dssp EHHHHHHHHHHHHHTTCCSTTSEEEEECTTCEEEETTTEEEEEEECCCSSSSCEEEEEEETTEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHcCCCcCCceEEEECCCCEEEeCCCEEEEEEECCCCCcccEEEEEEECCeEEEEcCCCCC
Confidence 9988765532 111 23456789999999999 99999999999999999987 5678999999865
No 50
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.49 E-value=3.6e-13 Score=145.32 Aligned_cols=158 Identities=18% Similarity=0.169 Sum_probs=105.1
Q ss_pred CCeEEEcCCCCCcH---HHHHHHH---HHcCCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhcc------
Q 013654 230 GEALIVDPGCRSEF---HEELLKV---VASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGK------ 297 (439)
Q Consensus 230 g~~vLID~G~~~~~---~~~l~~~---~~~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~------ 297 (439)
++.+|||||..... ...+..+ .....++++||+||.|.||+||+..+.+...+++||+++.+.+.+..
T Consensus 202 ~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~~~~~~~Iy~t~~t~~l~~~~l~d~~ 281 (636)
T 2ycb_A 202 NSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLDHI 281 (636)
T ss_dssp SCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHHhcCCCCeEEEcchHHHHHHHHHHHHH
Confidence 45899999988542 1111111 12345677999999999999999999874458999999988654421
Q ss_pred ---------CCCC--------CCceecCCCceEEE-CCeEEEEEeCCCCCCCCEEEEEC--Cc--cEEEEccccccCc--
Q 013654 298 ---------DDWS--------LGYTSVSGSEDICV-GGQRLTVVFSPGHTDGHVALLHA--ST--NSLIVGDHCVGQG-- 353 (439)
Q Consensus 298 ---------~~~~--------~~~~~v~~g~~l~l-Gg~~l~vi~tpGHt~g~~~l~~~--~~--~iLftGD~l~~~~-- 353 (439)
..+. .....+..|+.+++ ++.+++++ .+||++|++++++. +. +++||||+-....
T Consensus 282 ~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~-~~gH~~Gs~~~~i~~~~~~~~ilftGD~~~~~~~l 360 (636)
T 2ycb_A 282 DIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLH-NAGHILGSAMAHLHIGDGQHNMVYTGDFKYEQSRL 360 (636)
T ss_dssp HHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEE-ECCSSTTCEEEEEEETTTTTCEEECCSCCSSCCSS
T ss_pred HhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEe-CCCCCCCcEEEEEEECCCeEEEEEECCCCCCcccc
Confidence 0110 12466888999999 99888885 68999999999884 56 8999999832111
Q ss_pred -------cccc-----ccC----C--CCC----HHHHHHHHHHHHcCCCCEEEeCCC
Q 013654 354 -------SAVL-----DIT----A--GGN----MTDYFQSTYKFLELSPHALIPMHG 388 (439)
Q Consensus 354 -------~~~~-----~~~----~--~~~----~~~~~~sL~rL~~l~~~~IvPgHG 388 (439)
.... +.. . ..+ .+++.+.+++..+....+++|+|.
T Consensus 361 l~~~~~~~~~~D~LI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~fa 417 (636)
T 2ycb_A 361 LEAAANRFPRIETLVMESTYGGHEDVQPSRNRAEKELVKTIYSTLRRGGKILIPVFA 417 (636)
T ss_dssp SCCCCCCCSCCSEEEEECTTCSGGGCCCCHHHHHHHHHHHHHHHHHHTCCEEEECCT
T ss_pred cCCcccCCCCCeEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEECC
Confidence 0000 000 0 112 234455555555567889999996
No 51
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.47 E-value=1.2e-13 Score=149.04 Aligned_cols=118 Identities=19% Similarity=0.153 Sum_probs=85.4
Q ss_pred CCeEEEcCCCCCcH----HHHHHHHHH-cCCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhcc-------
Q 013654 230 GEALIVDPGCRSEF----HEELLKVVA-SLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGK------- 297 (439)
Q Consensus 230 g~~vLID~G~~~~~----~~~l~~~~~-~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~------- 297 (439)
+..+|||||..... ...+..... ...++++||+||.|.||+||+..+.+...+++||+++.+...+..
T Consensus 206 ~~~ILID~G~~~~~~~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~~~~~~~Iy~t~~t~~ll~~~l~d~~~ 285 (640)
T 2xr1_A 206 ESRILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKYGYEGPVYCTPPTRDLMVLLQLDYID 285 (640)
T ss_dssp SCEEEECCCCBCSSCSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCccccccccccccccccCCcccCcEEEECCCChhhhccHHHHHhcCCCCeEEECHHHHHHHHHHHHHHHH
Confidence 55899999987431 111110001 334567999999999999999999883347899999987654321
Q ss_pred --------CCCC--------CCceecCCCceEEE-CCeEEEEEeCCCCCCCCEEEEEC--Cc--cEEEEccc
Q 013654 298 --------DDWS--------LGYTSVSGSEDICV-GGQRLTVVFSPGHTDGHVALLHA--ST--NSLIVGDH 348 (439)
Q Consensus 298 --------~~~~--------~~~~~v~~g~~l~l-Gg~~l~vi~tpGHt~g~~~l~~~--~~--~iLftGD~ 348 (439)
..+. .....+..|+.+++ ++.++++ ..+||++|++++++. +. +++||||+
T Consensus 286 ~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~-~~~GH~~Gs~~~~i~~~~~~~~ilftGD~ 356 (640)
T 2xr1_A 286 VAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTF-HNAGHILGSAISHFHIGDGLHNVVFTGDY 356 (640)
T ss_dssp HHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEE-EECSSSTTCEEEEEEETTTTEEEEECCSC
T ss_pred HhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEE-EcCCCCcCcEEEEEEECCceEEEEEECCC
Confidence 0111 12456889999999 9988888 458999999999885 56 89999998
No 52
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.46 E-value=9.1e-13 Score=143.59 Aligned_cols=129 Identities=12% Similarity=0.086 Sum_probs=90.1
Q ss_pred CCCceEEEe--cCCeEEEcCCCCCc--HHHHHHHHHH-cCCCccEEEeCCCchhhhcChHHHHHhC-----CCCEEEeCH
Q 013654 220 DCGNHRFVA--QGEALIVDPGCRSE--FHEELLKVVA-SLPRKLIVFVTHHHRDHVDGLSIIQKCN-----PDAILLAHE 289 (439)
Q Consensus 220 ~~~~s~~vi--~g~~vLID~G~~~~--~~~~l~~~~~-~~~~i~~VilTH~H~DHigG~~~l~~~~-----p~a~V~~~~ 289 (439)
..++++|++ .+..+|||||.... ....+...+. ....+++||+||.|.||+||+..+.+.+ .+++||+++
T Consensus 12 ev~~n~~LIe~~~~~ILID~G~~~~~~~~~~~l~~L~~~~~~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~pIY~t~ 91 (717)
T 2i7x_A 12 SGTTVGSVVRFDNVTLLIDPGWNPSKVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATL 91 (717)
T ss_dssp SSSCCCEEEEETTEEEEECCCCCTTTSCHHHHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEH
T ss_pred CCCCCEEEEEECCeEEEEeCCCCcccchhhhHHHHHHhcCCCCCEEEECCCChHHHCCHHHHHHhhhhcccCCceEEecc
Confidence 344555554 34589999998852 1112212222 2236679999999999999999998764 278999998
Q ss_pred hHHHHhcc--------C----CC-----C--------CCceecCCCceEEE----CCeEEEEEeCCCCCCCCEEEEE--C
Q 013654 290 NTMRRIGK--------D----DW-----S--------LGYTSVSGSEDICV----GGQRLTVVFSPGHTDGHVALLH--A 338 (439)
Q Consensus 290 ~~~~~l~~--------~----~~-----~--------~~~~~v~~g~~l~l----Gg~~l~vi~tpGHt~g~~~l~~--~ 338 (439)
.+...+.. . .+ . ..+..+..++.+.+ ++.+++++ .+||++|++++.+ +
T Consensus 92 ~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~-~aGHs~Gs~~~~I~~~ 170 (717)
T 2i7x_A 92 PVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAY-NAGVCPGGSIWCISTY 170 (717)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEE-ECSSSTTCEEEEEECS
T ss_pred hhHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEE-CCCCCCCcEEEEEEeC
Confidence 77553210 0 01 0 02456888999999 88888886 5899999999887 4
Q ss_pred CccEEEEcccc
Q 013654 339 STNSLIVGDHC 349 (439)
Q Consensus 339 ~~~iLftGD~l 349 (439)
+.+++|+||+-
T Consensus 171 ~~~IvytGD~~ 181 (717)
T 2i7x_A 171 SEKLVYAKRWN 181 (717)
T ss_dssp SCEEEECSSCC
T ss_pred CCEEEEECCCC
Confidence 56899999974
No 53
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.46 E-value=1.4e-13 Score=131.78 Aligned_cols=114 Identities=15% Similarity=0.062 Sum_probs=84.5
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhCC-CCEEEeCHhHH---HHhccCCCCCCce
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNP-DAILLAHENTM---RRIGKDDWSLGYT 305 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~p-~a~V~~~~~~~---~~l~~~~~~~~~~ 305 (439)
++.+|||||.+. . .+ .....++++||+||.|.||++|+..+....+ .++||+++.+. +.+..........
T Consensus 48 ~~~iLiD~G~~~-~----~~-~~~~~~id~IliTH~H~DHi~gl~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 121 (258)
T 3g1p_A 48 DAITLIDAGLHD-L----AD-RWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGCDDLFKHPGLLDFSH 121 (258)
T ss_dssp TEEEEECCCCTT-H----HH-HCCTTSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSSCSTTTTTSCTTEEEEE
T ss_pred CcEEEEECCchH-H----Hh-hcCcccCCEEEEccCchhHhCCHHHHhccCCCCeEEEeChhhhhHHHHhcCCCcccccc
Confidence 568999999543 1 11 1234567899999999999999988865432 47899998765 3332221111124
Q ss_pred ecCCCceEEECCeEEEEEeCCCCCCCCEEEEECC--ccEEEEccccc
Q 013654 306 SVSGSEDICVGGQRLTVVFSPGHTDGHVALLHAS--TNSLIVGDHCV 350 (439)
Q Consensus 306 ~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~~--~~iLftGD~l~ 350 (439)
.+++|+.+.+|+.++++++++ |++++++|+++. .+++|+||+..
T Consensus 122 ~~~~g~~~~~g~~~v~~~~~~-H~~~~~g~~i~~~~~~i~~~GDt~~ 167 (258)
T 3g1p_A 122 TVEPFVVFDLQGLQVTPLPLN-HSKLTFGYLLETAHSRVAWLSDTAG 167 (258)
T ss_dssp ECCTTCCEEETTEEEEEEECC-SSSCCEEEEEECSSCEEEEECSCSS
T ss_pred ccCCCCeEEECCEEEEEEECC-CCCCceEEEEEeCCcEEEEECCCCC
Confidence 788999999999999999998 999999999864 47999999853
No 54
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.45 E-value=3.1e-13 Score=131.95 Aligned_cols=156 Identities=15% Similarity=0.165 Sum_probs=106.5
Q ss_pred CeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHh----CCCCEEEeCHhHHHHhccC--------
Q 013654 231 EALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKC----NPDAILLAHENTMRRIGKD-------- 298 (439)
Q Consensus 231 ~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~----~p~a~V~~~~~~~~~l~~~-------- 298 (439)
+.+|||||.+.. .++.+ ....++++||+||.|.||++|+..++.. ..+++||+++.+.+.+...
T Consensus 78 ~~iLID~G~~~~--~~l~~--~~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~~~~~ 153 (293)
T 3md7_A 78 TVVVIDTGPDFR--MQMID--SGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETP 153 (293)
T ss_dssp EEEEECCCTTHH--HHHHH--HTCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGGTSCC
T ss_pred eEEEEECCccHH--HHHHh--cCCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhhhccc
Confidence 589999997743 33332 2456788999999999999999977642 3588999999887765431
Q ss_pred ---CCC--CCceecCCCceEEECC----eEEEEEeCCCCCCCCEEEEECCccEEEEccccc-cCcc-------c--cccc
Q 013654 299 ---DWS--LGYTSVSGSEDICVGG----QRLTVVFSPGHTDGHVALLHASTNSLIVGDHCV-GQGS-------A--VLDI 359 (439)
Q Consensus 299 ---~~~--~~~~~v~~g~~l~lGg----~~l~vi~tpGHt~g~~~l~~~~~~iLftGD~l~-~~~~-------~--~~~~ 359 (439)
.+. .....+++|+.+.+|+ .+++++++++++.++++|.++ +++|+||+.. .... . ..+.
T Consensus 154 ~~~~~~~~~~~~~l~~g~~~~~g~~~~~~~v~~~~~~H~~~~~~g~~i~--~~~y~gDt~~~~~~~~~~~~~~Dlli~e~ 231 (293)
T 3md7_A 154 VGSSYPPILSMHDIAPETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIG--SVVYCTDVSAFPEQSLQYIKDADVLIIGA 231 (293)
T ss_dssp TTCCCCCCEEEEECCTTCCEEECCTTCCEEEEEEEEEETTEEEEEEEET--TEEEECSCSBCCGGGHHHHTTCSEEEEEC
T ss_pred cccCCCCceEEEEcCCCCcEEECCCCCcEEEEEEEecCCCCCEEEEEEe--EEEEECCCCCCCHHHHHHhcCCCEEEEeC
Confidence 011 2346688899999999 999999998555789999997 9999999852 2110 0 0011
Q ss_pred C---CCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCC
Q 013654 360 T---AGGNMTDYFQSTYKFLELSPHALIPMHGRVNL 392 (439)
Q Consensus 360 ~---~~~~~~~~~~sL~rL~~l~~~~IvPgHG~~~~ 392 (439)
. +......+.++++.++.+.++.+++.|=....
T Consensus 232 ~~~~~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~ 267 (293)
T 3md7_A 232 LQYRPHPSHFSLGEALEWIEKLSPKRAILTHMHVPL 267 (293)
T ss_dssp CCSSCBTTBCCHHHHHHHHHHHCCSEEEEESBCTTC
T ss_pred ccCCCCCCCCCHHHHHHHHHHcCCCEEEEECCCCCC
Confidence 0 11111223445555556678888888876543
No 55
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.44 E-value=1.4e-13 Score=132.49 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=80.3
Q ss_pred CceEEEecCCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHH---H-hC----CCCEEEeCHhHHH
Q 013654 222 GNHRFVAQGEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQ---K-CN----PDAILLAHENTMR 293 (439)
Q Consensus 222 ~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~---~-~~----p~a~V~~~~~~~~ 293 (439)
.++++++.++.+|||||.+.. . .+.....++++|++||.|.||++|+..+. + .+ ++++||+++.+.
T Consensus 11 ~~~~~~i~~~~iLiD~G~~~~--~---~l~~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~~~~~~- 84 (280)
T 2e7y_A 11 FSTWIYYSPERILFDAGEGVS--T---TLGSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEGNR- 84 (280)
T ss_dssp TEEEEEEGGGTEEEEECTTHH--H---HHGGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEETTCH-
T ss_pred ceEEEEECCcEEEEECCcchH--H---HhccCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEECccHH-
Confidence 344555566789999998743 2 23334556779999999999999999884 3 23 358999988765
Q ss_pred HhccC-----------CCCCCceecCCCceEEEC-----CeEEEEEeCCCCCCC--CEEEEEC
Q 013654 294 RIGKD-----------DWSLGYTSVSGSEDICVG-----GQRLTVVFSPGHTDG--HVALLHA 338 (439)
Q Consensus 294 ~l~~~-----------~~~~~~~~v~~g~~l~lG-----g~~l~vi~tpGHt~g--~~~l~~~ 338 (439)
.+... ........+++|+.+.+| +.+++++++ +|+++ +++|.+.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~-~H~~~~~~~g~~i~ 146 (280)
T 2e7y_A 85 AVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRT-KHVSSEVSFGYHIF 146 (280)
T ss_dssp HHHHHHHHHHHHCGGGTTTEEEEEECTTCCEECCCSSCSCEEEEEEEC-CSCSSSCCEEEEEE
T ss_pred HHHHHHHHHhhcccCCCCceEEEEcCCCCEEEeCCcccCCEEEEEEEc-cCCCCCceEEEEEE
Confidence 33210 111245678899999999 899999998 89999 9998874
No 56
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.40 E-value=2.4e-12 Score=121.93 Aligned_cols=144 Identities=22% Similarity=0.274 Sum_probs=100.0
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHh-CCCCEEEeCHhHHHHhccCCCCCCceecC
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKC-NPDAILLAHENTMRRIGKDDWSLGYTSVS 308 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~-~p~a~V~~~~~~~~~l~~~~~~~~~~~v~ 308 (439)
+..+|||||..... ...+.++++|++||.|.||+ |...+... .++++||+++.+.+.+.+ ...++
T Consensus 46 ~~~iliDpg~~~~~-------~~~~~~id~VliTH~H~DH~-~~~~l~~~~~~~~~v~~~~~~~~~l~~------~~~l~ 111 (235)
T 3kl7_A 46 NHSIQVDPVSEYAD-------YTTFPKADIILITHEHGDHL-DPKAIQAVEKSDTEIIANENSQKKLGK------GKVLK 111 (235)
T ss_dssp TEEEEESCCTTTCC-------TTSSCCCSEEEECCSSTTTC-CHHHHHHHCCTTCEEEECHHHHHHHTC------SEECC
T ss_pred CEEEEECCCCCccc-------hhhCCCCCEEEECCCccccC-CHHHHHHhhcCCCEEEEcHHHHHHhcC------cEEec
Confidence 45899999987541 23455778999999999999 66666653 468999999999887742 46788
Q ss_pred CCc-eEEECCeEEEEEeCCCCCC--------C-CEEEEE--CCccEEEEccccccCccccc---c-------cCCCCCHH
Q 013654 309 GSE-DICVGGQRLTVVFSPGHTD--------G-HVALLH--ASTNSLIVGDHCVGQGSAVL---D-------ITAGGNMT 366 (439)
Q Consensus 309 ~g~-~l~lGg~~l~vi~tpGHt~--------g-~~~l~~--~~~~iLftGD~l~~~~~~~~---~-------~~~~~~~~ 366 (439)
.|+ ++.+|+.+|+++++++.++ | .++|.+ ++.+++|+||+.+......+ + .....+.+
T Consensus 112 ~g~~~~~~g~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~g~~i~~~GDt~~~~~~~~l~~~Dv~il~~~~~~h~~~~ 191 (235)
T 3kl7_A 112 NGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRVYIAGDTEDIPEMKDLKDIDIAFLPVNQPYTMTVS 191 (235)
T ss_dssp TTCEECCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETTEEEEECCSCCSCGGGGGCCSCSEEEEECCTTTSCCHH
T ss_pred CCCEEEEECCEEEEEEEeecCCCccccccCCCCceEEEEEeCCeEEEEECCCCchhhHHhhcCCCEEEECCCCCcccCHH
Confidence 999 9999999999998763322 2 255555 45679999999754321111 0 01112444
Q ss_pred HHHHHHHHHHcCCCCEEEeCCCCC
Q 013654 367 DYFQSTYKFLELSPHALIPMHGRV 390 (439)
Q Consensus 367 ~~~~sL~rL~~l~~~~IvPgHG~~ 390 (439)
+..+ .++.+.++.++|.|-..
T Consensus 192 ea~~---~~~~l~~k~vip~H~~~ 212 (235)
T 3kl7_A 192 QAAK---AARMFSPKILYPYHYGD 212 (235)
T ss_dssp HHHH---HHHHHCCSEEEEESCTT
T ss_pred HHHH---HHHHcCCCEEEEEcCCC
Confidence 4444 44455789999999776
No 57
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.40 E-value=8.7e-13 Score=142.66 Aligned_cols=119 Identities=20% Similarity=0.164 Sum_probs=86.9
Q ss_pred CCeEEEcCCCCCcH----HHHHHHHH---H--cC--CCccEEEeCCCchhhhcChHHHHHhC-CCCEEEeCHhHHHHhcc
Q 013654 230 GEALIVDPGCRSEF----HEELLKVV---A--SL--PRKLIVFVTHHHRDHVDGLSIIQKCN-PDAILLAHENTMRRIGK 297 (439)
Q Consensus 230 g~~vLID~G~~~~~----~~~l~~~~---~--~~--~~i~~VilTH~H~DHigG~~~l~~~~-p~a~V~~~~~~~~~l~~ 297 (439)
+..+|||||..... ...+..+. . .. .++++||+||.|.||+||+..+.+.. .+++||++..+...+..
T Consensus 211 ~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiGglp~L~~~~~~~~pIy~t~~t~~ll~~ 290 (651)
T 3af5_A 211 ESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDLMVL 290 (651)
T ss_dssp SCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHTTHHHHHHTTCCCSCEEECHHHHHHHHH
T ss_pred CcEEEEeCCCChhccccchhhcccccchhhccCcccCCCCEEEECCCChHhhcCHHHHHhcCCCCceEEEcHHHHHHHHH
Confidence 56899999988542 11111110 1 33 56789999999999999999998742 27899999988654421
Q ss_pred ---------------CCCC--------CCceecCCCceEEE-CCeEEEEEeCCCCCCCCEEEEEC--Cc--cEEEEcccc
Q 013654 298 ---------------DDWS--------LGYTSVSGSEDICV-GGQRLTVVFSPGHTDGHVALLHA--ST--NSLIVGDHC 349 (439)
Q Consensus 298 ---------------~~~~--------~~~~~v~~g~~l~l-Gg~~l~vi~tpGHt~g~~~l~~~--~~--~iLftGD~l 349 (439)
..+. .....+..|+.+++ |+.++++ ..+||++|++++++. +. +++||||+-
T Consensus 291 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~-~~~gH~~Gs~~~~i~~~~~~~~ilftGD~~ 369 (651)
T 3af5_A 291 LQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTL-HNAGHILGSAIVHLHIGNGLHNIAITGDFK 369 (651)
T ss_dssp HHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEE-EECSSSTTCEEEEEEETTTTTCEEECCSCC
T ss_pred HHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEE-ecCCCCcCcEEEEEEECCCceEEEEeCCCC
Confidence 0010 12456889999999 9988888 558999999999885 56 899999984
No 58
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.38 E-value=1.9e-12 Score=126.41 Aligned_cols=106 Identities=16% Similarity=0.165 Sum_probs=77.5
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHh------CCCCEEEeCHhHHHHhccC-----
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKC------NPDAILLAHENTMRRIGKD----- 298 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~------~p~a~V~~~~~~~~~l~~~----- 298 (439)
++.+|||||.+.. ..+.+......++++|++||.|.||++|+..+.+. .++++||+++.+.+.+...
T Consensus 33 ~~~iliD~G~~~~--~~l~~~~~~~~~i~~i~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~ 110 (306)
T 2cbn_A 33 SGLWLFDCGEGTQ--HQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISG 110 (306)
T ss_dssp CCEEEECCCTTHH--HHHHTSCCCTTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTT
T ss_pred CcEEEEECCHHHH--HHHHHhCCCHHHcCEEEEecCCchhhCChHHHHHHHHhcCCCCCeEEEcCccHHHHHHHHHHhhc
Confidence 4589999998632 23322211234667999999999999999988753 2468899998876655321
Q ss_pred ---CCCCCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEEC
Q 013654 299 ---DWSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA 338 (439)
Q Consensus 299 ---~~~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~ 338 (439)
........+++|+.+.+++.+++.++++ |+.++++|.+.
T Consensus 111 ~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~-H~~~~~gy~i~ 152 (306)
T 2cbn_A 111 SWTDYPLEIVEIGAGEILDDGLRKVTAYPLE-HPLECYGYRIE 152 (306)
T ss_dssp CCCSSCEEEEECCSEEEEECSSEEEEEEECB-SSSCCEEEEEE
T ss_pred cCCCceEEEEEcCCCcEeecCCEEEEEEEcc-CCCCccEEEEE
Confidence 1123456788899999999999999988 88889888764
No 59
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.35 E-value=2.5e-12 Score=132.08 Aligned_cols=92 Identities=21% Similarity=0.235 Sum_probs=73.6
Q ss_pred CCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccC---C------------CCCCceecCCCceEEECCeE
Q 013654 255 PRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD---D------------WSLGYTSVSGSEDICVGGQR 319 (439)
Q Consensus 255 ~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~---~------------~~~~~~~v~~g~~l~lGg~~ 319 (439)
.++++||+||.|.||+||+..+.+ +++||+++.+...+... . ....+..++.|+.+.+|+.+
T Consensus 83 ~~i~~v~lTH~H~DHiggl~~l~~---~~~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~ 159 (429)
T 2az4_A 83 YQHTAVFLSHAHLDHSRMINYLDP---AVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVGEIS 159 (429)
T ss_dssp CSEEEEECSCSCHHHHTTGGGBCT---TSCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEETTEE
T ss_pred ccCCEEEECCchHHHhCcHhHhcC---CCCEEECHHHHHHHHHHHHhCccccccccccccccceEEEeCCCCeEEECCEE
Confidence 356699999999999999998863 68999999887655321 0 12345678899999999999
Q ss_pred EEEEeCCCC-CCCCEEEEE--CCccEEEEccccc
Q 013654 320 LTVVFSPGH-TDGHVALLH--ASTNSLIVGDHCV 350 (439)
Q Consensus 320 l~vi~tpGH-t~g~~~l~~--~~~~iLftGD~l~ 350 (439)
+++++++ | ++|++++.+ ++.+++|+||+.+
T Consensus 160 v~~~~~~-H~~~gs~~~~i~~~~~~i~~tGD~~~ 192 (429)
T 2az4_A 160 VEIVPVD-HDAYGASALLIRTPDHFITYTGDLRL 192 (429)
T ss_dssp EEEEECC-CSSTTCEEEEEEETTEEEEECCSCCS
T ss_pred EEEEECC-CCChhhEEEEEEeCCcEEEECCCccc
Confidence 9999985 7 899999887 4568999999864
No 60
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.35 E-value=7.6e-13 Score=137.28 Aligned_cols=127 Identities=15% Similarity=0.187 Sum_probs=87.3
Q ss_pred ceEEEe--cCCeEEEcCCCCCcH--HHHHHHH-HHcCCCccEEEeCCCchhhhcChHHHHHhCC-CCEEEeCHhHHHHhc
Q 013654 223 NHRFVA--QGEALIVDPGCRSEF--HEELLKV-VASLPRKLIVFVTHHHRDHVDGLSIIQKCNP-DAILLAHENTMRRIG 296 (439)
Q Consensus 223 ~s~~vi--~g~~vLID~G~~~~~--~~~l~~~-~~~~~~i~~VilTH~H~DHigG~~~l~~~~p-~a~V~~~~~~~~~l~ 296 (439)
+++|++ .+..+|||||..... ...+..+ .....++++||+||.|.||+||+..+..... +.+||+++.+...+.
T Consensus 25 ~s~~li~~~~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~~~~~~iy~t~~t~~l~~ 104 (459)
T 2i7t_A 25 RSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYR 104 (459)
T ss_dssp SCEEEEEETTEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSSCCSEEEEEHHHHHHHH
T ss_pred CCEEEEEECCeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHHHhcCCCCCEEechHHHHHHH
Confidence 444444 355899999986321 0111000 1123356799999999999999999976642 689999987754321
Q ss_pred c---------------CCC--------CCCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEEC--CccEEEEccccc
Q 013654 297 K---------------DDW--------SLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA--STNSLIVGDHCV 350 (439)
Q Consensus 297 ~---------------~~~--------~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~--~~~iLftGD~l~ 350 (439)
. ..+ ......++.++.+.++|.+++++ .+||++|+++++++ +.+++|+||+..
T Consensus 105 ~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~-~~GH~~Gs~~~~i~~~~~~il~sGD~~~ 182 (459)
T 2i7t_A 105 WLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCY-HAGHVLGAAMFMIEIAGVKLLYTGDFSR 182 (459)
T ss_dssp HHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEE-ECCSSTTCEEEEEEETTEEEEECCSCCC
T ss_pred HHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEECCEEEEEE-eCCCccCcEEEEEEECCcEEEEeCCCCC
Confidence 1 000 01345688899999999888876 57999999999885 458999999864
No 61
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.33 E-value=2.5e-12 Score=126.63 Aligned_cols=106 Identities=16% Similarity=0.148 Sum_probs=74.5
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhC------CCCEEEeCHhHHHHhccC-----
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCN------PDAILLAHENTMRRIGKD----- 298 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~------p~a~V~~~~~~~~~l~~~----- 298 (439)
++.+|||||.+.. ..+.+......++++||+||.|.||++|+..+.+.+ ++++||+++.+.+.+...
T Consensus 31 ~~~iLiD~G~~~~--~~l~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~ 108 (320)
T 1y44_A 31 RSVWLFDCGEATQ--HQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAVTK 108 (320)
T ss_dssp SEEEEECCCTTHH--HHHTTSSCCGGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHTT
T ss_pred CcEEEEECCHHHH--HHHHHcCCCHHHcCEEEEeCCChhhhCCHHHHHHHHHhcCCCCCEEEEeCHHHHHHHHHHHHhhc
Confidence 4589999998632 222221112235669999999999999999887632 468999998876655321
Q ss_pred ---CCCCCceecCCCceEEECCeEEEEEeCCCCCCCCEEEEEC
Q 013654 299 ---DWSLGYTSVSGSEDICVGGQRLTVVFSPGHTDGHVALLHA 338 (439)
Q Consensus 299 ---~~~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~ 338 (439)
.+......+++|+.+.+|+.+++.+++ +|+.++++|.+.
T Consensus 109 ~~~~~~~~~~~~~~g~~~~~~~~~v~~~p~-~H~~~~~gy~i~ 150 (320)
T 1y44_A 109 THLTYPLAIQEIEEGIVFEDDQFIVTAVSV-IHGVEAFGYRVQ 150 (320)
T ss_dssp CCCSSCEEEEECCSEEEEECSSEEEEEEEC-BSSSSBEEEEEE
T ss_pred cCCCCceEEEEcCCCceEecCCEEEEEEEc-cCCCCcceEEEe
Confidence 112345678889999999877777665 699999998774
No 62
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.31 E-value=1e-11 Score=124.87 Aligned_cols=138 Identities=14% Similarity=0.075 Sum_probs=89.7
Q ss_pred CCCccEEEeCCCchhhhc--ChHHHHHhCC-CCEEEeCHhHHHHhccCCCC-CCceecCCCceEEECCeEEEEEeCC---
Q 013654 254 LPRKLIVFVTHHHRDHVD--GLSIIQKCNP-DAILLAHENTMRRIGKDDWS-LGYTSVSGSEDICVGGQRLTVVFSP--- 326 (439)
Q Consensus 254 ~~~i~~VilTH~H~DHig--G~~~l~~~~p-~a~V~~~~~~~~~l~~~~~~-~~~~~v~~g~~l~lGg~~l~vi~tp--- 326 (439)
+.++++|++||.|.||++ ++..+.+.++ +++||++....+.+...... .....++.|+.+.+|+.+++++++.
T Consensus 107 l~~id~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~~~~l~~~g~~~~~~~~l~~g~~~~~g~~~v~~~~~~H~~ 186 (360)
T 2wyl_A 107 IRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDRT 186 (360)
T ss_dssp CCCCSEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHHHHHTCCGGGEEECCTTCEEEETTEEEEEEECCCC-
T ss_pred cCCCCEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHHHHHHHHcCCChheEEEcCCCCEEEECCEEEEEEeccCcc
Confidence 345679999999999996 4566766664 89999999887777542221 2466789999999999999998763
Q ss_pred --------CCCCC---------CEEEEE--CCccEEEEccccccCccc--------c---cccC--CC--CCHHHHHHHH
Q 013654 327 --------GHTDG---------HVALLH--ASTNSLIVGDHCVGQGSA--------V---LDIT--AG--GNMTDYFQST 372 (439)
Q Consensus 327 --------GHt~g---------~~~l~~--~~~~iLftGD~l~~~~~~--------~---~~~~--~~--~~~~~~~~sL 372 (439)
||++| +++|++ ++.+++|+||+.+..... . +... +. ...-...+++
T Consensus 187 ~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~~~~i~~~~~~Dv~il~~g~~~~~~~~h~~~~ea~ 266 (360)
T 2wyl_A 187 ALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADML 266 (360)
T ss_dssp -----------------CCTTTBEEEEEEETTEEEEECTTCCCCTTHHHHHHHSCCCEEEEEBCCCCTTCCCSBCHHHHH
T ss_pred cccccccccccccccccccCcccEEEEEEECCcEEEEeCCCCcCHHHHHHhhCCCCCEEEecCCCCcccccCCCCHHHHH
Confidence 45554 566766 456899999986543211 0 0000 00 0011223445
Q ss_pred HHHHcCCCCEEEeCCCCCC
Q 013654 373 YKFLELSPHALIPMHGRVN 391 (439)
Q Consensus 373 ~rL~~l~~~~IvPgHG~~~ 391 (439)
+.++.+.++.++|.|....
T Consensus 267 ~~~~~l~~k~vi~~H~~~~ 285 (360)
T 2wyl_A 267 RMGEALNAKVVIPFHHDIW 285 (360)
T ss_dssp HHHHHHTCSEEEEESTTTB
T ss_pred HHHHHhCCCEEEEEeeccc
Confidence 5555668899999997654
No 63
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.28 E-value=1.8e-11 Score=123.98 Aligned_cols=152 Identities=13% Similarity=0.071 Sum_probs=97.9
Q ss_pred CCCccEEEeCCCchhhhc--ChHHHHHhCC-CCEEEeCHhHHHHhccCCCC-CCceecCCCceEEECCeEEEEEeCC---
Q 013654 254 LPRKLIVFVTHHHRDHVD--GLSIIQKCNP-DAILLAHENTMRRIGKDDWS-LGYTSVSGSEDICVGGQRLTVVFSP--- 326 (439)
Q Consensus 254 ~~~i~~VilTH~H~DHig--G~~~l~~~~p-~a~V~~~~~~~~~l~~~~~~-~~~~~v~~g~~l~lGg~~l~vi~tp--- 326 (439)
+.++++|++||.|.||++ ++..+.+.+| +++||++....+.+...... .....++.|+.+.+|+.+++++++.
T Consensus 131 ~~~iD~IliTH~H~DHig~~~l~~l~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~l~~g~~~~~g~~~v~~~~~~H~~ 210 (379)
T 3bv6_A 131 IKEIDAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLWLGWGVPQERCIVAKVGDVLEIGDVKIRVLDSFDRT 210 (379)
T ss_dssp CCCCSEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHHHHHTCCGGGEEECCTTCEEEETTEEEEEEECCCHH
T ss_pred CCCCCEEEECCCCcccCChHHHHHHHhcCCCCcEEEecHHHHHHHHHcCCChhhEEEeCCCCEEEECCEEEEEEeccccc
Confidence 345779999999999997 5666777765 89999999887777542221 2457789999999999999999763
Q ss_pred -------CCC--CC---------CEEEEE--CCccEEEEccccccCccc--------c---cccC--CC--CCHHHHHHH
Q 013654 327 -------GHT--DG---------HVALLH--ASTNSLIVGDHCVGQGSA--------V---LDIT--AG--GNMTDYFQS 371 (439)
Q Consensus 327 -------GHt--~g---------~~~l~~--~~~~iLftGD~l~~~~~~--------~---~~~~--~~--~~~~~~~~s 371 (439)
+|+ +| +++|++ ++.+++|+||+.+..... . +... +. ...-...++
T Consensus 211 ~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~~~~i~~~~~~Dv~il~~g~~~~~~~~h~~~~ea 290 (379)
T 3bv6_A 211 ALVTLPKGVSSYDKAILDGMDERAVNYLIETSGGSVYHSGDSHYSNYYAKHGNDYQIDVALLSYGENPRGVTDKMTSSDV 290 (379)
T ss_dssp HHTCCCTTSCSSCGGGGGCHHHHBEEEEEEETTEEEEECTTCCCCTTHHHHHHHSCCSEEEEEBCCCCTTCCCSBCHHHH
T ss_pred ccccccccccccccccccccCCceEEEEEEeCCeEEEEeCCCCccHHHHHHhhcCCCCEEEecCCCCcccccccCCHHHH
Confidence 333 22 577766 456899999986543211 0 0000 10 001123344
Q ss_pred HHHHHcCCCCEEEeCCCCCCC---ChHHHHHHHHHHH
Q 013654 372 TYKFLELSPHALIPMHGRVNL---WPKHMLCGYLKYE 405 (439)
Q Consensus 372 L~rL~~l~~~~IvPgHG~~~~---~~~~~i~~~L~~~ 405 (439)
++.++.+.++.++|.|..... ...+.+.++++.+
T Consensus 291 ~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~ 327 (379)
T 3bv6_A 291 LRAAESLDCQVVVPFHHDIWANFQNDPREIEVLWNMK 327 (379)
T ss_dssp HHHHHHHTCSEEEEESTTSBGGGCCCTHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeecccccccCCHHHHHHHHHhh
Confidence 555556688999999976542 1223344555543
No 64
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.23 E-value=7.5e-11 Score=124.87 Aligned_cols=120 Identities=15% Similarity=0.248 Sum_probs=82.2
Q ss_pred CCeEEEcCCCCCc----------------------HHHHHHHHHHcC--CCccEEEeCCCchhhhcChHHHHHhCCCCEE
Q 013654 230 GEALIVDPGCRSE----------------------FHEELLKVVASL--PRKLIVFVTHHHRDHVDGLSIIQKCNPDAIL 285 (439)
Q Consensus 230 g~~vLID~G~~~~----------------------~~~~l~~~~~~~--~~i~~VilTH~H~DHigG~~~l~~~~p~a~V 285 (439)
++.+|||||.... ..+.+...++.. .++++||+||.|.||++|+..+.+.+|..+|
T Consensus 27 ~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vilTH~H~DHiggl~~l~~~~~~~~i 106 (547)
T 2bib_A 27 GHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILVTHTHSDHIGNVDELLSTYPVDRV 106 (547)
T ss_dssp TEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEECCCSCHHHHTTHHHHHHHSCBSEE
T ss_pred CeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEEEcCCCccccCCHHHHHHhCCccEE
Confidence 5589999998621 123444444433 4577999999999999999999998877789
Q ss_pred EeCHhHHHHhccCC------------------CCCCce--ecCCCceEEECCeEEEEEeC-CC-C-----------CCCC
Q 013654 286 LAHENTMRRIGKDD------------------WSLGYT--SVSGSEDICVGGQRLTVVFS-PG-H-----------TDGH 332 (439)
Q Consensus 286 ~~~~~~~~~l~~~~------------------~~~~~~--~v~~g~~l~lGg~~l~vi~t-pG-H-----------t~g~ 332 (439)
++++.+...+.... ...... .+..++.+.+|+.++++++. ++ | ..++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~g~~~i~~l~~~~~~h~~~~~~~~~~~n~~S 186 (547)
T 2bib_A 107 YLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQFGDMDIQLYNYENETDSSGELKKIWDDNSNS 186 (547)
T ss_dssp ECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEEEETTEEEEEESCSCCBCTTSCBCCBSSGGGGC
T ss_pred EECcccccccCChHHHHhHHHHHHHHHHHHHHhCCeEEEeecCCCceEecCCeeEEEecCccccCccccccccCCCCCCc
Confidence 99865433221100 011111 34677899999999999964 22 3 3457
Q ss_pred EEEEE--CCccEEEEcccc
Q 013654 333 VALLH--ASTNSLIVGDHC 349 (439)
Q Consensus 333 ~~l~~--~~~~iLftGD~l 349 (439)
+++.+ .+.++||+||+-
T Consensus 187 ~vl~i~~~~~~iLftGD~~ 205 (547)
T 2bib_A 187 LISVVKVNGKKIYLGGDLD 205 (547)
T ss_dssp CEEEEEETTEEEEECTTCC
T ss_pred EEEEEEECCEEEEecCCcc
Confidence 77777 456899999975
No 65
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.20 E-value=1.1e-10 Score=113.54 Aligned_cols=168 Identities=15% Similarity=0.165 Sum_probs=99.7
Q ss_pred CCCceEEEec--CCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHH-Hhc
Q 013654 220 DCGNHRFVAQ--GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMR-RIG 296 (439)
Q Consensus 220 ~~~~s~~vi~--g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~-~l~ 296 (439)
+..+++|++. ++.+|||||.+..+...+.+......++++|++||.|+||++|+..+.+.+++++||+++.+.+ .+.
T Consensus 30 ~~~g~s~li~~~~~~iLiD~G~~~~~~~~l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~~~~~~v~~~~~~~~~~~~ 109 (284)
T 2p4z_A 30 AEHGLSLLLKKGNKEIVVDTGQSENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERNPEVKIYTHKEILNKKYA 109 (284)
T ss_dssp BCSSCEEEEEETTEEEEECCCSSTHHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHHCTTCEEEEEGGGGSCEEE
T ss_pred cCCEEEEEEEECCeEEEEeCCCCHHHHHHHHHcCCChhhCCEEEECCCCchhhccHHHHHHHcCCCceecCHHHHHHHhc
Confidence 3344444442 4489999999765444444433334467799999999999999999988888999999988754 221
Q ss_pred cCC------CC----------CCceecCCCceEEECCeEEEEE-eCCCCC----------------------CCCEEEEE
Q 013654 297 KDD------WS----------LGYTSVSGSEDICVGGQRLTVV-FSPGHT----------------------DGHVALLH 337 (439)
Q Consensus 297 ~~~------~~----------~~~~~v~~g~~l~lGg~~l~vi-~tpGHt----------------------~g~~~l~~ 337 (439)
... .. .....+++ ...+++. +..+ ++|+|. ++.+++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~i~~g-i~~i~~~~~~h~~~~~~g~~~~~~~~~y~~D~~~de~~~~~ 186 (284)
T 2p4z_A 110 MRKGGQFEEIGFDLSFYEKYKNNFVLIDK--DAEIEEG-FYVITNTDITYDNEFTTKNFFVEKEGKRIPDKFLDEVFVVV 186 (284)
T ss_dssp ECSSSCEEECSCCHHHHHHHGGGEEEESS--CEEEETT-EEEECSCCCCSCCHHHHTTEEEEETTEEEECCCTTCCEEEE
T ss_pred cCccccccccccccchhhhcCceEEEeCC--CeEEeCC-EEEEeeeCCccccccCCCceEEEcCCCEecCCCCCceEEEE
Confidence 110 00 01122222 2334321 2222 455542 22344555
Q ss_pred CCcc--EEEEccc-------ccc-----Cccc---ccc--cCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCC
Q 013654 338 ASTN--SLIVGDH-------CVG-----QGSA---VLD--ITAGGNMTDYFQSTYKFLELSPHALIPMHGRV 390 (439)
Q Consensus 338 ~~~~--iLftGD~-------l~~-----~~~~---~~~--~~~~~~~~~~~~sL~rL~~l~~~~IvPgHG~~ 390 (439)
...+ ++++|+. +.. .... .+. -....+...+.++++.++++.++.++++|...
T Consensus 187 ~~~dglvli~gcsH~Gi~n~l~~~~~~~~~~~i~~~igg~Hl~~~~~~~~~~a~~~~~~~~~~~l~l~H~~~ 258 (284)
T 2p4z_A 187 KEEDGINVVTGCSHAGILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVKDIARKIEEYGVKKVLTGHCTG 258 (284)
T ss_dssp EETTEEEEEESSCTTCHHHHHHHHHHHHTCSCBSEEEECCCCTTCCHHHHHHHHHHHHHTTBCCEEECGGGC
T ss_pred EcCCcEEEEECCCCcCHHHHHHHHHHHcCCCceEEEEEcccCCCCCHHHHHHHHHHHHcCCCCEEEeeCcCc
Confidence 4445 7788864 100 0000 000 11234566788899999999999999999985
No 66
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.17 E-value=7.3e-11 Score=119.07 Aligned_cols=106 Identities=17% Similarity=0.094 Sum_probs=70.0
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhC----------CCCEEEeCHhHHHHhcc--
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCN----------PDAILLAHENTMRRIGK-- 297 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~----------p~a~V~~~~~~~~~l~~-- 297 (439)
++.+|||||.+.. ..+.+......++++||+||.|.||++|+..+.... +.++||++....+.+..
T Consensus 28 ~~~iLiD~G~g~~--~~l~~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~~~~~~~~~l~iygp~~~~~~l~~~l 105 (368)
T 3zwf_A 28 GECWLFDCGEGTQ--TQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTM 105 (368)
T ss_dssp TEEEEECCCTTHH--HHHHHSSSCGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC------CCEEEEEETTHHHHHHHHH
T ss_pred CeEEEEeCChhHH--HHHHHcCCChHHCCEEEECCCChHHhCcHHHHHHHhhhccccccCCCCeEEEEcHHHHHHHHHHH
Confidence 5689999997753 333332223346779999999999999998876531 36899999887766543
Q ss_pred ----C--CCCCCceecCC---------------------------CceE------------EECCeEEEEEeCCCCCCCC
Q 013654 298 ----D--DWSLGYTSVSG---------------------------SEDI------------CVGGQRLTVVFSPGHTDGH 332 (439)
Q Consensus 298 ----~--~~~~~~~~v~~---------------------------g~~l------------~lGg~~l~vi~tpGHt~g~ 332 (439)
. .+...++.+.. |+.+ +.++.+|+.+++. |+..+
T Consensus 106 ~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~V~a~~~~-H~vp~ 184 (368)
T 3zwf_A 106 ELSHTELVFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDSEENSYLLFDDEQFVVKAFRLF-HRIPS 184 (368)
T ss_dssp HHTTCCCSSCEEEEEECCCGGGSCC-------------------CCCEECCBTTTTBEEEEECSSEEEEEEEEE-SSSCE
T ss_pred HhhCcCCCceEEEEEeecCccccccccccccccccccccCcccccccccccccccCceeEEeCCCEEEEEEecc-CCCce
Confidence 1 11122222321 3333 3378888888874 88888
Q ss_pred EEEEEC
Q 013654 333 VALLHA 338 (439)
Q Consensus 333 ~~l~~~ 338 (439)
++|.+.
T Consensus 185 ~gy~i~ 190 (368)
T 3zwf_A 185 FGFSVV 190 (368)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888884
No 67
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.15 E-value=1.6e-10 Score=114.53 Aligned_cols=115 Identities=8% Similarity=0.048 Sum_probs=85.5
Q ss_pred eEEEcCCCCCcHHHHHHHHHH-------cCCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCC-----
Q 013654 232 ALIVDPGCRSEFHEELLKVVA-------SLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDD----- 299 (439)
Q Consensus 232 ~vLID~G~~~~~~~~l~~~~~-------~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~----- 299 (439)
.+|||+|.+.. ..+.+... ...++++||+||.|.||++|+..+++.. +++||+++.+.+.+....
T Consensus 53 ~iLiD~G~~~~--~~l~~~~~l~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~~~-~~~vy~~~~~~~~l~~~~~~f~~ 129 (321)
T 3jxp_A 53 WILCNASPDIR--AQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGC-PHQVWCTDMVHQDLTTGFPLFNM 129 (321)
T ss_dssp EEEECCCTTHH--HHHHTCGGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGGGC-CEEEEECHHHHHHTTTTSCHHHH
T ss_pred EEEEeCCchHH--HHHHhcccccccccCCcccCCEEEECCCChhhhhhHHHHHhcC-CCeEEECHHHHHHHHhhCccccc
Confidence 59999998643 33333221 2456779999999999999999997654 889999999988876421
Q ss_pred ----C-CCCceecCCCceEEE---CCeEEEEEeCC-------CCCC-----CCEEEEEC----CccEEEEcccc
Q 013654 300 ----W-SLGYTSVSGSEDICV---GGQRLTVVFSP-------GHTD-----GHVALLHA----STNSLIVGDHC 349 (439)
Q Consensus 300 ----~-~~~~~~v~~g~~l~l---Gg~~l~vi~tp-------GHt~-----g~~~l~~~----~~~iLftGD~l 349 (439)
. ......++.|+.+.+ ++.+|+.+.++ -|.+ ..+.|.+. +.+++|+||+-
T Consensus 130 ~~~~~~~i~~~~i~~g~~~~i~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~~g~~i~y~~Dt~ 203 (321)
T 3jxp_A 130 LSHWNGGLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLG 203 (321)
T ss_dssp HTTTTTCEEEEECCSSSCEECTTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTTCCEEEEESSCC
T ss_pred cccccCceeEEEcCCCCeEEeccCCCeEEEEEEecCCccccccccccccCCCcEEEEEEecCCCcEEEEECCCC
Confidence 0 123467888999999 99999999886 3664 56777775 34699999984
No 68
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.15 E-value=8.5e-11 Score=118.54 Aligned_cols=107 Identities=21% Similarity=0.191 Sum_probs=83.9
Q ss_pred cCCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCC--CCCCcee
Q 013654 229 QGEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDD--WSLGYTS 306 (439)
Q Consensus 229 ~g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~--~~~~~~~ 306 (439)
.|..++||+... ....++++||+||.|.||++|+.. . .+++||+++.+.+.+...- .......
T Consensus 35 pG~~ilVD~f~~-----------~~~~~IdaI~lTH~H~DHiggl~~---~-~~~pIy~s~~t~~ll~~~l~~~~~~~~~ 99 (367)
T 4b87_A 35 PGTGFTVDAFQY-----------GVVEGCTAYFLTHFHSDHYAGLSK---H-FTFPVYCSEITGNLLKNKLHVQEQYIHP 99 (367)
T ss_dssp TTSSEEESCCSS-----------SSCTTCCEEECCCCCHHHHTTCST---T-CCSCEEECHHHHHHHHHHSCCCGGGEEE
T ss_pred CCCeEEEeCCCc-----------CCccCCcEEEECcChHHHhCCccc---c-cCCcEEECHHHHHHHHHHhccccceEEE
Confidence 355799998643 246678899999999999999983 3 3789999999887764321 1234567
Q ss_pred cCCCceEEECCeEEEEEeCCCCCCCCEEEEEC--Cc-cEEEEcccccc
Q 013654 307 VSGSEDICVGGQRLTVVFSPGHTDGHVALLHA--ST-NSLIVGDHCVG 351 (439)
Q Consensus 307 v~~g~~l~lGg~~l~vi~tpGHt~g~~~l~~~--~~-~iLftGD~l~~ 351 (439)
++.|+.+.+|+.+++++. +||++|++++++. ++ +++|+||+.+.
T Consensus 100 l~~g~~~~ig~~~v~~~~-agH~~gs~~~~i~~~~g~~il~tGD~~~~ 146 (367)
T 4b87_A 100 LPLDTECIVNGVKVVLLD-ANHCPGAVMILFYLPNGTVILHTGDFRAD 146 (367)
T ss_dssp CCBTSCEEETTEEEEEEE-CSSSTTCEEEEEECTTSCEEEECCSCCCC
T ss_pred eCCCCEEEECCEEEEEEe-CCCcCCcEEEEEEcCCCcEEEEecCcccC
Confidence 888999999999999887 6899999999984 34 49999998654
No 69
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.15 E-value=7.3e-10 Score=106.31 Aligned_cols=127 Identities=16% Similarity=0.149 Sum_probs=85.2
Q ss_pred CccEEEeCCCchhhhcChHHHHHhCCCCEEEeC-HhHHHHhccCCCCCCceecCCCceEEECCeEEEEEeCCCCCCC---
Q 013654 256 RKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAH-ENTMRRIGKDDWSLGYTSVSGSEDICVGGQRLTVVFSPGHTDG--- 331 (439)
Q Consensus 256 ~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~-~~~~~~l~~~~~~~~~~~v~~g~~l~lGg~~l~vi~tpGHt~g--- 331 (439)
++++|++||.|.||+++...+... .+++||++ ....+.+...... ....+ ++++++|+.+|+.+++. |+++
T Consensus 64 ~id~iliTH~H~DH~~~~~~~~~~-~~~~v~~~~~~~~~~l~~~g~~-~~~~~--~~~~~~~~~~i~~~pa~-H~~~~~~ 138 (264)
T 3rpc_A 64 NVTAVVVTHTHLDHWDDTAINSIP-KSLPIFVQNTADKELITSQGFI-DVRII--FESLEFNGITLRKTGGS-HGTVEMY 138 (264)
T ss_dssp TCCEEECSCCCGGGSCHHHHHHSC-TTSCEEESSHHHHHHHHHTTCS-CEEEC--SSEEEETTEEEEEECCC-SSCHHHH
T ss_pred cCCEEEECCCchhhCCCHHHHhhc-cCCeEEEeCHHHHHHHHhcCCC-eeEEe--cccEEECCEEEEEeccc-cCCcccc
Confidence 567999999999999999888765 48999999 8777777554332 22333 57899999777777653 7664
Q ss_pred -----------CEEEEEC---CccEEEEccccccCcc--------cc---ccc----------CCCCCHHHHHHHHHHHH
Q 013654 332 -----------HVALLHA---STNSLIVGDHCVGQGS--------AV---LDI----------TAGGNMTDYFQSTYKFL 376 (439)
Q Consensus 332 -----------~~~l~~~---~~~iLftGD~l~~~~~--------~~---~~~----------~~~~~~~~~~~sL~rL~ 376 (439)
.++|.+. +.+++|+||+.+.... .. +.. ...-+.++ +++.++
T Consensus 139 ~~p~~~~~~~~~~g~~i~~~~~~~i~~~GDt~~~~~~~~~~~~~~~Dv~il~~g~~~~~~~~~~~hm~~~e---a~~~~~ 215 (264)
T 3rpc_A 139 ANPVLAPLAGDAMGVIFEAADEPTVYLVGDTVWTSDVEKALLRFDPNVIIMNTGYAQILGFEDSIIMGTKD---IGRMVV 215 (264)
T ss_dssp TSTTHHHHHCCCCEEEEECTTSCCEEECCSCCSCHHHHHHHHHHCCSEEEEECSCBCBTTCSSCSSCCHHH---HHHHHH
T ss_pred ccccccccccccEEEEEEeCCccEEEEECCcCchHHHHHHHHHhCCCEEEEecCccccccccCCcccCHHH---HHHHHH
Confidence 3566664 4579999999654321 00 000 01123344 444455
Q ss_pred cCCCCEEEeCCCCC
Q 013654 377 ELSPHALIPMHGRV 390 (439)
Q Consensus 377 ~l~~~~IvPgHG~~ 390 (439)
.+.++.++|.|-..
T Consensus 216 ~l~~~~vi~~H~~~ 229 (264)
T 3rpc_A 216 RKPEAKIIAVHMDT 229 (264)
T ss_dssp HCTTSEEEEESCSS
T ss_pred hCCcCeEEEEcccc
Confidence 66789999999864
No 70
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=98.98 E-value=9.2e-10 Score=109.65 Aligned_cols=107 Identities=20% Similarity=0.164 Sum_probs=80.1
Q ss_pred ecCCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccC--CCCCCce
Q 013654 228 AQGEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKD--DWSLGYT 305 (439)
Q Consensus 228 i~g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~--~~~~~~~ 305 (439)
+.|..+.||+... ....++++||+||.|.||+||+..+. +++||+++.+...+... .......
T Consensus 7 i~g~~i~vD~f~~-----------~~~~~i~ai~lTH~H~DHiggl~~l~----~~pVy~s~~t~~ll~~~l~~~~~~~~ 71 (336)
T 3zdk_A 7 IPHTPIAVDFWSL-----------RRAGTARLFFLSHMHSDHTVGLSSTW----ARPLYCSPITAHLLHRHLQVSKQWIQ 71 (336)
T ss_dssp CTTSSEEESCCCH-----------HHHCSSCEEECCCCCGGGSTTCSTTC----CSCEEECHHHHHHHHHHHCCCTTTEE
T ss_pred eCCCCEeecCCcc-----------cCCCCCCEEEECCChHHHHCchHHHc----CCCEEecHHHHHHHHHhhhhcccceE
Confidence 3355688997642 12346789999999999999999863 78999999998776532 1112345
Q ss_pred ecCCCceEEE-------CCeEEEEEeCCCCCCCCEEEEEC--CccEEEEccccc
Q 013654 306 SVSGSEDICV-------GGQRLTVVFSPGHTDGHVALLHA--STNSLIVGDHCV 350 (439)
Q Consensus 306 ~v~~g~~l~l-------Gg~~l~vi~tpGHt~g~~~l~~~--~~~iLftGD~l~ 350 (439)
.+..++.+.+ |+.+++++.+ ||++|+++++++ +.+++|+||+-+
T Consensus 72 ~~~~~~~~~i~~~~~~~g~~~v~~~~~-~H~~gs~~~~i~~~~~~i~~tGD~~~ 124 (336)
T 3zdk_A 72 ALEVGESHVLPLDEIGQETMTVTLLDA-NHCPGSVMFLFEGYFGTILYTGDFRY 124 (336)
T ss_dssp ECCTTSEEEEESSSSSSCEEEEEEEEC-SSSTTCEEEEEEETTEEEEECCSCCC
T ss_pred ecCCCCeEEecCcccccCCEEEEEEEC-CCCcceEEEEEEeCCceEEEeCCCCC
Confidence 5666666655 8889999988 799999999884 567999999843
No 71
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=98.86 E-value=3.1e-08 Score=95.42 Aligned_cols=67 Identities=19% Similarity=0.342 Sum_probs=50.1
Q ss_pred CCCCceEEEecCCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHH
Q 013654 219 DDCGNHRFVAQGEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMR 293 (439)
Q Consensus 219 ~~~~~s~~vi~g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~ 293 (439)
.+..+.+|++.. +|||||....+.+.+.+....+. ++|++||.|.||+||+..+ ++++||+++.+.+
T Consensus 28 ~~~~G~s~lie~--iLiD~G~~~~l~~~l~~~gi~~~--~~IvlTH~H~DH~ggl~~l----~~~~v~~~~~~~~ 94 (267)
T 3h3e_A 28 ESEHGFSVLVDS--VLFDTGKSDVFLKNARKLGIDLP--KDVLISHGHYDHAGGLLYL----SGKRVWLRKEALD 94 (267)
T ss_dssp CCCSSCEEEETT--EEECCCSSSHHHHHHHHTTCCCC--SEEECSCSCHHHHGGGGGC----CSCEEEEEGGGGS
T ss_pred eeCcEeHHeeee--EEEECCCcHHHHHHHHHCCcCcC--CEEEECCCChhhhCCHHHh----cCCEEEECHHHHH
Confidence 344566666665 99999998754444444332222 7999999999999999998 6999999987653
No 72
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=98.83 E-value=1.3e-08 Score=95.16 Aligned_cols=127 Identities=17% Similarity=0.181 Sum_probs=73.6
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCCCccEEEeCCCchhhhcChHHHHHhCCCCEEEeCHhHHHHhccCCCCCCceecCC
Q 013654 230 GEALIVDPGCRSEFHEELLKVVASLPRKLIVFVTHHHRDHVDGLSIIQKCNPDAILLAHENTMRRIGKDDWSLGYTSVSG 309 (439)
Q Consensus 230 g~~vLID~G~~~~~~~~l~~~~~~~~~i~~VilTH~H~DHigG~~~l~~~~p~a~V~~~~~~~~~l~~~~~~~~~~~v~~ 309 (439)
+..+|||||.+.. .+.....++++|++||.|.||++ ...+. ++++++ ..
T Consensus 29 ~~~iLiD~g~~~~------~~~~~~~~id~VliTH~H~DH~~-~~~l~---~~~~vi---------------------~~ 77 (220)
T 1vjn_A 29 GKTIVTDPFDESV------GYPIPNVTADVVTESHQHFDHNA-HHLVK---GNFRVI---------------------DR 77 (220)
T ss_dssp TEEEEESCCC-----------CCCCCBCSEEECSSCC---CG-GGGCB---SSCEEE---------------------CS
T ss_pred CEEEEEcCCCCcC------CCCcCCCCcCEEEECCCCCCCCC-chHhc---CCCEEE---------------------cC
Confidence 4589999997631 11112456679999999999998 66543 245554 12
Q ss_pred CceEEECCeEEEEEeCCCCCC------CC-EEEEEC--CccEEEEccccccCc--------cccccc-----CCCCCHHH
Q 013654 310 SEDICVGGQRLTVVFSPGHTD------GH-VALLHA--STNSLIVGDHCVGQG--------SAVLDI-----TAGGNMTD 367 (439)
Q Consensus 310 g~~l~lGg~~l~vi~tpGHt~------g~-~~l~~~--~~~iLftGD~l~~~~--------~~~~~~-----~~~~~~~~ 367 (439)
+..+++++.+++.+.+. |+. |. ++|.++ +.+++|+||+..... ...+-. ....+.++
T Consensus 78 ~g~~~~~~~~I~~~~~~-H~~~~g~~~g~~~g~~i~~~g~~i~~~GDt~~~~~~~~~~~~~~~Dvlil~~g~~~h~~~~~ 156 (220)
T 1vjn_A 78 PGAYTVNGVKIKGVETF-HDPSHGRERGKNIVFVFEGEGIKVCHLGDLGHVLTPAQVEEIGEIDVLLVPVGGTYTIGPKE 156 (220)
T ss_dssp SEEEEETTEEEEEEEEE-EC-------CEEEEEEEEETTEEEEECTTCCSCCCHHHHHHHCCCSEEEEECCSSSSCCHHH
T ss_pred CCeEEECCEEEEEEeee-cCCCCCccCCCcEEEEEEECCeEEEEeCCCCCcchHHHHHhhCCCCEEEEcCCCcCcCCHHH
Confidence 23678899999988776 665 34 666664 457999999865331 011000 11234444
Q ss_pred HHHHHHHHHcCCCCEEEeCCCCCC
Q 013654 368 YFQSTYKFLELSPHALIPMHGRVN 391 (439)
Q Consensus 368 ~~~sL~rL~~l~~~~IvPgHG~~~ 391 (439)
..+.++ .+.++.++|.|-...
T Consensus 157 a~~~~~---~~~~k~vi~~H~~~~ 177 (220)
T 1vjn_A 157 AKEVAD---LLNAKVIIPMHYKTK 177 (220)
T ss_dssp HHHHHH---HTTCSEEEEESCCCS
T ss_pred HHHHHH---hcCCCEEEEEecccc
Confidence 444444 446788888886543
No 73
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=97.30 E-value=0.00049 Score=59.70 Aligned_cols=99 Identities=17% Similarity=0.268 Sum_probs=68.4
Q ss_pred CCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeec
Q 013654 15 NDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVR 94 (439)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~ 94 (439)
+..||||+|.+..| .-|.||++.++. +|. . .+++..++.++-|+...
T Consensus 22 ~~~e~LL~~r~~~~-------------~~W~lPgG~ve~--gEt---~---------------~~aa~REl~EEtGl~~~ 68 (155)
T 3u53_A 22 NAIEFLLLQASDGI-------------HHWTPPKGHVEP--GED---D---------------LETALRETQEEAGIEAG 68 (155)
T ss_dssp CSEEEEEEEESSSS-------------CCEECSEEECCS--SCC---H---------------HHHHHHHHHHHHCCCGG
T ss_pred CCcEEEEEEecCCC-------------CCEECCeeeccC--CCC---H---------------HHHHHHHHHHHHCCccc
Confidence 45699999876543 239999998875 332 2 47899999999999887
Q ss_pred cCcee-eeeeeccCCCCCCCCeeeEEEEEeEccCC-----cccccccccccCHHHHHHHH
Q 013654 95 DGGEW-KLWKCVEEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCINCL 148 (439)
Q Consensus 95 ~~~~~-~~~~w~~~~~~~~~~~~dT~f~~a~~p~~-----~~~e~~~~~W~~~~~al~~~ 148 (439)
...+. .+....... .......+.||++....+ ...|.....|++++++++.+
T Consensus 69 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~ea~~~~ 126 (155)
T 3u53_A 69 QLTIIEGFKRELNYV--ARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLA 126 (155)
T ss_dssp GEEEEEEEEEEEEEE--ETTEEEEEEEEEEEESCTTCCCCCCTTEEEEEEECHHHHHHHH
T ss_pred cceeeeeEeeeeecC--CCcceeEEEEEEEEEeccCCccCCCcceeEEEEeEHHHHHHHc
Confidence 65543 333333333 334455566677766655 33588889999999998865
No 74
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=97.16 E-value=0.0016 Score=56.23 Aligned_cols=112 Identities=19% Similarity=0.250 Sum_probs=76.7
Q ss_pred ehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHH
Q 013654 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (439)
+++|.|+ +.++||+|++..|.-+ .+...|.||++.++. +|. . .+++..++.
T Consensus 17 ~~vi~~~--~~~vLl~~r~~~~~~~-------~~~~~w~~PgG~ve~--gE~---~---------------~~aa~RE~~ 67 (159)
T 1sjy_A 17 GVVLLNE--RGDILLVQEKGIPGHP-------EKAGLWHIPSGAVED--GEN---P---------------QDAAVREAC 67 (159)
T ss_dssp EEEEBCT--TCCEEEEEESCC-----------CCCCCEECSEEECCT--TSC---H---------------HHHHHHHHH
T ss_pred EEEEEeC--CCCEEEEEecccCcCC-------CCCCeEECCccccCC--CCC---H---------------HHHHHHHHH
Confidence 4456654 3489999998765321 234679999998874 222 2 477999999
Q ss_pred HHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCCc------ccccccccccCHHHHHHHHHhc
Q 013654 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDGN------QILQEGCKWMSTQSCINCLAEV 151 (439)
Q Consensus 87 ~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~~------~~e~~~~~W~~~~~al~~~~~~ 151 (439)
++.|+.+....+.....+..+. + ..+.+.+|++..+.+. ..|.....|++++++.+.+...
T Consensus 68 EEtGl~~~~~~~l~~~~~~~~~--~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 134 (159)
T 1sjy_A 68 EETGLRVRPVKFLGAYLGRFPD--G--VLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAAG 134 (159)
T ss_dssp HHHSCCEEEEEEEEEEEEECTT--S--CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHHTT
T ss_pred HHHCccceeeEEEEEEecccCC--C--ceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhhhcc
Confidence 9999998754433322322223 2 6788899999887653 4677899999999999887755
No 75
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=97.10 E-value=0.00015 Score=67.52 Aligned_cols=125 Identities=14% Similarity=0.120 Sum_probs=80.8
Q ss_pred eehhhcCCCCCceeEEeecCCCCCCC---------------ccccc----cccc--ccCCCCCccccccccCccCCCcce
Q 013654 6 VALILKNPLNDSEFLLVKQTPPPKFN---------------DEEYD----SYVD--SDLWDLPAIKLNHIQGEKSEPTIS 64 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~----~~~d--~~~~~l~~~~l~~~~~~~~~~~~~ 64 (439)
++.++-|+.+ .++||+||.+||-+. .+.|+ .|-+ .-+|.||++.++. .+|. .
T Consensus 39 V~vl~~~~~~-~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPgG~ve~-~gEs---~-- 111 (218)
T 3q91_A 39 VTVLLFNSSR-RSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAGLVDQ-PGLS---L-- 111 (218)
T ss_dssp EEEEEEEGGG-TEEEEEEEECHHHHHHHTC-------------------------CCEEEECEEEECCS-SSCC---H--
T ss_pred EEEEEEECCC-CEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECCcceeCC-CCCC---H--
Confidence 3455566653 499999999988540 00011 0111 3578899887764 1222 2
Q ss_pred ecccccccccccchhhHHHHHHHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccC------C----cccccc
Q 013654 65 IQGSEKINLGKFDIESALNQILEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLD------G----NQILQE 134 (439)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~------~----~~~e~~ 134 (439)
.+++..|+.++-|+......+.++..+.+.+ +.. .....+|+|.... + +.+|..
T Consensus 112 -------------~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~--g~~-~~~~~~f~a~~~~~~~~~~~~~~~d~~E~~ 175 (218)
T 3q91_A 112 -------------EEVACKEAWEECGYHLAPSDLRRVATYWSGV--GLT-GSRQTMFYTEVTDAQRSGPGGGLVEEGELI 175 (218)
T ss_dssp -------------HHHHHHHHHHHHCBCCCGGGCEEEEEEEEC-----C-CEEEEEEEEEECGGGBCC---------CCE
T ss_pred -------------HHHHHHHHHHHhCCccccCceEEEEEEecCC--Ccc-ceEEEEEEEEECCcccccCCCCCCCCCcEE
Confidence 4789999999999998777777777776655 333 4456777777532 1 467999
Q ss_pred cccccCHHHHHHHHHhcCC
Q 013654 135 GCKWMSTQSCINCLAEVKP 153 (439)
Q Consensus 135 ~~~W~~~~~al~~~~~~~~ 153 (439)
...|++.+++++++.+.+-
T Consensus 176 ev~wv~l~el~~~i~~g~i 194 (218)
T 3q91_A 176 EVVHLPLEGAQAFADDPDI 194 (218)
T ss_dssp EEEEEEGGGHHHHHHCTTS
T ss_pred EEEEEEHHHHHHHHHcCCC
Confidence 9999999999999988754
No 76
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=96.99 E-value=0.00093 Score=56.22 Aligned_cols=109 Identities=18% Similarity=0.277 Sum_probs=72.1
Q ss_pred eeehhhcCCC-CCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHH
Q 013654 5 NVALILKNPL-NDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALN 83 (439)
Q Consensus 5 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (439)
..+++|-+.. ++.++||+|+++. ...|.||++.++. +|. . .+++..
T Consensus 5 ~~~~vi~~~~~~~~~vLl~~r~~~-------------~~~w~~PgG~ve~--gE~---~---------------~~aa~R 51 (138)
T 1ktg_A 5 AAGLVIYRKLAGKIEFLLLQASYP-------------PHHWTPPKGHVDP--GED---E---------------WQAAIR 51 (138)
T ss_dssp EEEEEEEEEETTEEEEEEEEESST-------------TCCEESSEEECCT--TCC---H---------------HHHHHH
T ss_pred EEEEEEEEecCCCcEEEEEEccCC-------------CCcEeCCccccCC--CCC---H---------------HHHHHH
Confidence 3445555443 2458999998621 2589999998875 332 2 478999
Q ss_pred HHHHHcCCeeccCcee-eeeeeccCCCCCCCCeeeEEEEEeEccCC----cccccccccccCHHHHHHHH
Q 013654 84 QILEQLGFGVRDGGEW-KLWKCVEEPEFGPGLTIHTVYIMGKLLDG----NQILQEGCKWMSTQSCINCL 148 (439)
Q Consensus 84 ~~l~~~gl~l~~~~~~-~~~~w~~~~~~~~~~~~dT~f~~a~~p~~----~~~e~~~~~W~~~~~al~~~ 148 (439)
++.++.|+.+..-.+. .+...++-. .+..+....||++.+..+ +..|.....|++++++.+..
T Consensus 52 E~~EEtGl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~ 119 (138)
T 1ktg_A 52 ETKEEANITKEQLTIHEDCHETLFYE--AKGKPKSVKYWLAKLNNPDDVQLSHEHQNWKWCELEDAIKIA 119 (138)
T ss_dssp HHHHHHCCCGGGEEEEEEEEEEEEEE--ETTEEEEEEEEEEEECSCCCCCCCTTEEEEEEECHHHHHHHH
T ss_pred HHHHHHCCCccceEEeccccceEEEE--eCCCceEEEEEEEEecCCcccCCCchhcEeEeccHHHHHHhh
Confidence 9999999965443333 222222211 124567888999998773 44678899999999998864
No 77
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=96.96 E-value=0.0005 Score=58.54 Aligned_cols=96 Identities=22% Similarity=0.311 Sum_probs=68.6
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|+. ...|.||++.++. +|. . .+++..++.++-|+.+..
T Consensus 14 ~~~vLL~~r~---------------~g~W~~PgG~ve~--gEt---~---------------~~aa~RE~~EEtGl~~~~ 58 (134)
T 3i7u_A 14 DGEVLLIKTP---------------SNVWSFPKGNIEP--GEK---P---------------EETAVREVWEETGVKGEI 58 (134)
T ss_dssp TTEEEEEECT---------------TSCEECCEEECCT--TCC---H---------------HHHHHHHHHHHHSEEEEE
T ss_pred CCEEEEEEeC---------------CCcEECCeeEecC--CCC---H---------------HHHHHHHHHHhcCceEEE
Confidence 4599999863 1469999998875 222 2 478999999999999865
Q ss_pred Cce-eeeeeeccCCCCCCCCeeeEEEEEeEccCC---cccccccccccCHHHHHHHH
Q 013654 96 GGE-WKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINCL 148 (439)
Q Consensus 96 ~~~-~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~---~~~e~~~~~W~~~~~al~~~ 148 (439)
... ..+.++.+.. +......+.||++...++ .+.|.....|++++++.+.+
T Consensus 59 ~~~l~~~~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~e~~~~l 113 (134)
T 3i7u_A 59 LDYIGEIHYWYTLK--GERIFKTVKYYLMKYKEGEPRPSWEVKDAKFFPIKEAKKLL 113 (134)
T ss_dssp EEEEEEEEEEEEET--TEEEEEEEEEEEEEEEEECCCCCTTSSEEEEEEHHHHHHHB
T ss_pred eeeeeeeeEEecCC--CceEEEEEEEEEEEEcCCcCcCChhheEEEEEEHHHHhhhc
Confidence 433 3344555554 333344567899988776 33588889999999998764
No 78
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=96.93 E-value=0.0019 Score=56.82 Aligned_cols=107 Identities=21% Similarity=0.306 Sum_probs=69.0
Q ss_pred ehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHH
Q 013654 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (439)
+.++-+ +.++||+||.++|. ....|.+|++.++. +|. . .+++..++.
T Consensus 38 ~vii~~---~~~vLL~~~~r~~~----------~~~~w~lPgG~ve~--gEs---~---------------~~aa~REl~ 84 (170)
T 1v8y_A 38 AVIALR---EGRMLFVRQMRPAV----------GLAPLEIPAGLIEP--GED---P---------------LEAARRELA 84 (170)
T ss_dssp EEEEEE---TTEEEEEECCBTTT----------TBCCBBCSEEECCT--TCC---H---------------HHHHHHHHH
T ss_pred EEEEEE---CCEEEEEEEEeCCC----------CCCEEECCccccCC--CCC---H---------------HHHHHHHHH
Confidence 344444 34999999987762 24679999988864 332 2 478999999
Q ss_pred HHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC-----cccccccccccCHHHHHHHHHhcC
Q 013654 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCINCLAEVK 152 (439)
Q Consensus 87 ~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~-----~~~e~~~~~W~~~~~al~~~~~~~ 152 (439)
++.|+ . +.+.++..+...+ +.. ...+.+|++....+ +..|.....|++++++.+.+...+
T Consensus 85 EEtGl-~--~~~~~l~~~~~~~--~~~-~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~ 149 (170)
T 1v8y_A 85 EQTGL-S--GDLTYLFSYFVSP--GFT-DEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERHQRGE 149 (170)
T ss_dssp HHHSE-E--EEEEEEEEEESCT--TTB-CCEEEEEEEEEEEECC--------CEEEEECHHHHHHHHHTTS
T ss_pred HHHCC-C--cCceeeEEEecCC--Ccc-ccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHHHHHCCC
Confidence 99999 3 3445555543333 222 33455666665442 457888999999999999887653
No 79
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=96.84 E-value=0.002 Score=54.60 Aligned_cols=105 Identities=17% Similarity=0.246 Sum_probs=69.8
Q ss_pred eehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
.+++|.+ +.++||+|++..+.. ....+|.||++.++. +|. . .+++..++
T Consensus 9 v~~vi~~---~~~vLL~~r~~~~~~--------~~~g~w~lPgG~ve~--gE~---~---------------~~aa~REl 57 (140)
T 3gwy_A 9 VAAVIRL---GEKYLCVQRGQTKFS--------YTSFRYEFPGGKVEE--GES---L---------------QEALQREI 57 (140)
T ss_dssp EEEEEEE---TTEEEEEEC-----------------CCEECSEEECCT--TCC---H---------------HHHHHHHH
T ss_pred EEEEEEe---CCEEEEEEecCCCCC--------CCCCeEECCCccCCC--CCC---H---------------HHHHHHHH
Confidence 3556664 459999999876530 023589999987764 322 2 47789999
Q ss_pred HHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC--cccccccccccCHHHHHH
Q 013654 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCIN 146 (439)
Q Consensus 86 l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~--~~~e~~~~~W~~~~~al~ 146 (439)
.++.|+.+....+.....+.. +..++...+|.+....+ +..|.....|++++++.+
T Consensus 58 ~EE~Gl~~~~~~~~~~~~~~~-----~~~~~~~~~f~~~~~~~~~~~~E~~~~~W~~~~el~~ 115 (140)
T 3gwy_A 58 MEEMDYVIEVGEKLLTVHHTY-----PDFEITMHAFLCHPVGQRYVLKEHIAAQWLSTREMAI 115 (140)
T ss_dssp HHHHCCCEEEEEEEEEEECCC-----SSCCEEEEEEEEEECCSCCCCCSSCEEEEECHHHHTT
T ss_pred HHhhCcEEEeceEEEEEEEEe-----CCceEEEEEEEEEecCCcccccccceeEeccHHHHhh
Confidence 999999887655444333332 34678889999999877 346788899999988654
No 80
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=96.65 E-value=0.004 Score=51.33 Aligned_cols=100 Identities=18% Similarity=0.163 Sum_probs=67.9
Q ss_pred eehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
.+.+|-|.. .++||+|++. ..|.+|++.++. +|. . .+++..++
T Consensus 5 ~~~vi~~~~--~~vLl~~r~~---------------g~w~~PgG~ve~--gE~---~---------------~~aa~RE~ 47 (126)
T 1vcd_A 5 AGGVVFNAK--REVLLLRDRM---------------GFWVFPKGHPEP--GES---L---------------EEAAVREV 47 (126)
T ss_dssp EEEEEECTT--SCEEEEECTT---------------SCEECCEECCCT--TCC---H---------------HHHHHHHH
T ss_pred EEEEEEcCC--CEEEEEEECC---------------CCccCCcCcCCC--CCC---H---------------HHHHHHHH
Confidence 345555543 3899999864 469999988774 222 2 36788999
Q ss_pred HHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC---cccccccccccCHHHHHHH
Q 013654 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINC 147 (439)
Q Consensus 86 l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~---~~~e~~~~~W~~~~~al~~ 147 (439)
.++.|+.+....+....++..+ .......+|.+....+ +..|.....|++++++.+.
T Consensus 48 ~EE~Gl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~e~~~~~w~~~~el~~~ 107 (126)
T 1vcd_A 48 WEETGVRAEVLLPLYPTRYVNP-----KGVEREVHWFLMRGEGAPRLEEGMTGAGWFSPEEARAL 107 (126)
T ss_dssp HHHHCCEEEEEEEEEEEEEECT-----TSCEEEEEEEEEEEESCCCCCTTCCEEEEECHHHHHHH
T ss_pred HHhhCcEeeeccEEeEEEEecC-----CceEEEEEEEEEEcCCCCCCCcceeeeEEcCHHHHHHh
Confidence 9999999876544333333332 3345667777766554 3467789999999998775
No 81
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=96.53 E-value=0.0092 Score=51.16 Aligned_cols=105 Identities=19% Similarity=0.323 Sum_probs=73.9
Q ss_pred eehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
.+++|.|. +.++||+|++..++. ....|.||++.++. +|. . .+++..++
T Consensus 11 v~~vi~~~--~~~vLL~~r~~~~~~---------~~g~w~~PgG~ve~--gE~---~---------------~~aa~REl 59 (153)
T 3grn_A 11 VYALIRNE--KGEFLLLRRSENSRT---------NAGKWDLPGGKVNP--DES---L---------------KEGVAREV 59 (153)
T ss_dssp EEEEEECT--TCCEEEEEECTTCSS---------STTCEECSEEECCT--TCC---H---------------HHHHHHHH
T ss_pred EEEEEEcC--CCcEEEEEEcCCCCC---------CCCeEECceeecCC--CCC---H---------------HHHHHhhh
Confidence 45667665 348999998865332 35689999988764 222 2 47889999
Q ss_pred HHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCCc---ccccccccccCHHHHHH
Q 013654 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDGN---QILQEGCKWMSTQSCIN 146 (439)
Q Consensus 86 l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~~---~~e~~~~~W~~~~~al~ 146 (439)
.++.|+.+....+.....+..+ ..+....+|.+....++ ..|.....|++++++.+
T Consensus 60 ~EE~Gl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 118 (153)
T 3grn_A 60 WEETGITMVPGDIAGQVNFELT-----EKKVIAIVFDGGYVVADVKLSYEHIEYSWVSLEKILG 118 (153)
T ss_dssp HHHHCCCCCCCSEEEEEEEECS-----SCEEEEEEEEEEECCCCCCCCTTEEEEEEECHHHHTT
T ss_pred hhhhCcEeecceEEEEEEEecC-----CceEEEEEEEEEecCCcEecCCCcceEEEEEHHHhhh
Confidence 9999999887766555444332 35677778888777763 36778899999998744
No 82
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=96.52 E-value=0.011 Score=51.63 Aligned_cols=112 Identities=13% Similarity=0.119 Sum_probs=76.2
Q ss_pred ehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCC-CCccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWD-LPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
+.+|.|.. .++||+|.++.+.. ....|+ +|++.++. +|. . .+++..++
T Consensus 38 ~v~i~~~~--~~vLl~~r~~~~~~---------~~g~w~~~PgG~ve~--gEs---~---------------~~aa~REl 86 (171)
T 1q27_A 38 NAFLRNSQ--GQLWIPRRSPSKSL---------FPNALDVSVGGAVQS--GET---Y---------------EEAFRREA 86 (171)
T ss_dssp EEEEEETT--TEEEECCSCCSSSC---------CCCSCCCSEEEECSS--SSC---H---------------HHHHHHHH
T ss_pred EEEEECCC--CeEEEEEecCCCCC---------CCCccccccCccccC--CCC---H---------------HHHHHHHH
Confidence 34455543 38999886554322 236799 99999875 222 2 37789999
Q ss_pred HHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC----cccccccccccCHHHHHHHHHhcCC
Q 013654 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG----NQILQEGCKWMSTQSCINCLAEVKP 153 (439)
Q Consensus 86 l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~----~~~e~~~~~W~~~~~al~~~~~~~~ 153 (439)
.++.|+.+....+.++..+. +.. ..... -..+|.+.. .+ +..|.....|++++++.+.....++
T Consensus 87 ~EEtGl~~~~~~l~~~~~~~-~~~-~~~~~-~~~~f~~~~-~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~ 154 (171)
T 1q27_A 87 REELNVEIDALSWRPLASFS-PFQ-TTLSS-FMCVYELRS-DATPIFNPNDISGGEWLTPEHLLARIAAGEA 154 (171)
T ss_dssp HHHHSCTTSSSCEEEEEEEC-SSS-SCCSS-EEEEEEEEC-CCCCCSCTTTCSCCEEECHHHHHHHHHHHSS
T ss_pred HHHHCCcccccceEEEEEEe-ccC-CCCcc-EEEEEEEEE-CCccccCchhhheEEEecHHHHHHHHhcCCC
Confidence 99999999887777777665 121 22223 556677777 44 3567889999999999988776643
No 83
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=96.51 E-value=0.0016 Score=56.30 Aligned_cols=101 Identities=19% Similarity=0.267 Sum_probs=63.0
Q ss_pred ehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHH
Q 013654 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (439)
+++|.|. +.++||+|++ ...|.||++.++. +|. . .+++..++.
T Consensus 25 ~~ii~~~--~~~vLL~~r~---------------~~~w~lPgG~ve~--gEs---~---------------~~aa~REl~ 67 (153)
T 3eds_A 25 AAVIKNE--QGEILFQYPG---------------GEYWSLPAGAIEL--GET---P---------------EEAVVREVW 67 (153)
T ss_dssp EEEEBCT--TCCEEEECC------------------CBBCSEEECCT--TSC---H---------------HHHHHHHHH
T ss_pred EEEEEcC--CCeEEEEEcC---------------CCcEECCccccCC--CCC---H---------------HHHHHHHHH
Confidence 4556553 3489997765 5689999988764 222 2 478999999
Q ss_pred HHcCCeeccCceeeee-----eeccCCCCCCCCeeeEEEEEeEccCC----cccccccccccCHHHHHH
Q 013654 87 EQLGFGVRDGGEWKLW-----KCVEEPEFGPGLTIHTVYIMGKLLDG----NQILQEGCKWMSTQSCIN 146 (439)
Q Consensus 87 ~~~gl~l~~~~~~~~~-----~w~~~~~~~~~~~~dT~f~~a~~p~~----~~~e~~~~~W~~~~~al~ 146 (439)
++.|+.+....+.... +|.-+. +....+-+.+|.+.+..+ +..|.....|++++++.+
T Consensus 68 EEtGl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 134 (153)
T 3eds_A 68 EETGLKVQVKKQKGVFGGKEYRYTYSN--GDEVEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPP 134 (153)
T ss_dssp HHHCEEEEEEEEEEEECSGGGEEECTT--SCEEEEEEEEEEEEEEEECCC-------CEEEECGGGCCC
T ss_pred HHHCccceeeeEEEEecccceeeecCC--CCeEEEEEEEEEEEecCCccccCCCcEEEEEEECHHHCch
Confidence 9999998765544322 333344 333355678888888766 346788999999887543
No 84
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=96.51 E-value=0.0039 Score=53.44 Aligned_cols=93 Identities=19% Similarity=0.356 Sum_probs=70.1
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|+.++ ....|.||++.++. +|. . .+++..++.++.|+.+..
T Consensus 15 ~~~vLl~~r~~~------------~~~~w~~PgG~ve~--gEs---~---------------~~aa~REl~EEtGl~~~~ 62 (153)
T 3shd_A 15 EGKFLVVEETIN------------GKALWNQPAGHLEA--DET---L---------------VEAAARELWEETGISAQP 62 (153)
T ss_dssp TTEEEEEEEEET------------TEEEEECSEEECCT--TCC---H---------------HHHHHHHHHHHHCCCCCC
T ss_pred CCEEEEEEecCC------------CCCCEECCeEEeCC--CCC---H---------------HHHHHHHHHHHHCccccc
Confidence 459999998721 24589999988865 332 2 478999999999999888
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCC-----cccccccccccCHHHH
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSC 144 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~-----~~~e~~~~~W~~~~~a 144 (439)
..+.....|..+. ...+-+.+|++....+ +..|.....|++++++
T Consensus 63 ~~~~~~~~~~~~~----~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 63 QHFIRMHQWIAPD----KTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEI 112 (153)
T ss_dssp CEEEEEEEECCTT----SCCEEEEEEEEECSSCCCCCCCSTTCCEEEEECHHHH
T ss_pred CcEEEEEEEecCC----CceEEEEEEEEEccccCcCCCCcccceeeEEecHHHh
Confidence 7766666666553 4466667888888775 3568889999999998
No 85
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=96.51 E-value=0.002 Score=53.81 Aligned_cols=102 Identities=19% Similarity=0.274 Sum_probs=70.6
Q ss_pred eehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
.+++|.| + .++||+|++. ..|.||++.++. +|. . .+++..++
T Consensus 7 ~~~vi~~--~-~~vLl~~r~~---------------~~w~~PgG~ve~--gE~---~---------------~~aa~RE~ 48 (134)
T 2pbt_A 7 AGGVLFK--D-GEVLLIKTPS---------------NVWSFPKGNIEP--GEK---P---------------EETAVREV 48 (134)
T ss_dssp EEEEEEE--T-TEEEEEECTT---------------SCEECCEEECCT--TCC---H---------------HHHHHHHH
T ss_pred EEEEEEE--C-CEEEEEEeCC---------------CcEECCccccCC--CCC---H---------------HHHHHHHH
Confidence 3455555 3 4999999864 789999988764 222 2 47789999
Q ss_pred HHHcCCeeccCceee-eeeeccCCCCCCCCeeeEEEEEeEccCCc---ccccccccccCHHHHHHH
Q 013654 86 LEQLGFGVRDGGEWK-LWKCVEEPEFGPGLTIHTVYIMGKLLDGN---QILQEGCKWMSTQSCINC 147 (439)
Q Consensus 86 l~~~gl~l~~~~~~~-~~~w~~~~~~~~~~~~dT~f~~a~~p~~~---~~e~~~~~W~~~~~al~~ 147 (439)
.++.|+.+....+.. +.+..+.+ +........+|++....+. ..|.....|++++++.+.
T Consensus 49 ~EE~Gl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 112 (134)
T 2pbt_A 49 WEETGVKGEILDYIGEIHYWYTLK--GERIFKTVKYYLMKYKEGEPRPSWEVKDAKFFPIKEAKKL 112 (134)
T ss_dssp HHHHSEEEEEEEEEEEEEEEEEET--TEEEEEEEEEEEEEEEEECCCCCTTSSEEEEEEHHHHHHH
T ss_pred HHHHCCccEEeeeeeEEEEEeeCC--CcEEEEEEEEEEEEecCCCcCCCcceeEEEEEcHHHHHhh
Confidence 999999987654433 32334433 3334556788888887662 237889999999998875
No 86
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=96.47 E-value=0.0036 Score=53.53 Aligned_cols=101 Identities=15% Similarity=0.103 Sum_probs=65.2
Q ss_pred ceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeeccC
Q 013654 17 SEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDG 96 (439)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~~ 96 (439)
.++||+||.++|. +...|.+|++.++. +|. . .+++..++.++.|+...
T Consensus 17 ~~vLLv~~~r~~~----------~~~~w~~PgG~ve~--gEt---~---------------~~aa~REl~EEtGl~~~-- 64 (145)
T 2w4e_A 17 GEAVLIRQFRYPL----------RATITEIVAGGVEK--GED---L---------------GAAAARELLEEVGGAAS-- 64 (145)
T ss_dssp SEEEEEEEEETTT----------TEEEEECEEEECCT--TCC---H---------------HHHHHHHHHHHHCEECS--
T ss_pred CEEEEEEEEecCC----------CCCEEEeCCccCCC--CCC---H---------------HHHHHHHHHHhhCCccC--
Confidence 4899999976653 24579999999874 332 2 47899999999999864
Q ss_pred ceeeeeeeccCCCCCCCCeeeEEEEEeE-ccCC----cccccccccccCHHHHHHHHHhcC
Q 013654 97 GEWKLWKCVEEPEFGPGLTIHTVYIMGK-LLDG----NQILQEGCKWMSTQSCINCLAEVK 152 (439)
Q Consensus 97 ~~~~~~~w~~~~~~~~~~~~dT~f~~a~-~p~~----~~~e~~~~~W~~~~~al~~~~~~~ 152 (439)
.+..+..+...+ +.. .....+|++. +..+ +..|.....|++++++.+.+...+
T Consensus 65 ~~~~l~~~~~~~--~~~-~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~ 122 (145)
T 2w4e_A 65 EWVPLPGFYPQP--SIS-GVVFYPLLALGVTLGAAQLEDTETIERVVLPLAEVYRMLEAGE 122 (145)
T ss_dssp EEEECCCBBSCT--TTC-CCEEEEEEEEEEEEC--------CEEEEEEEHHHHHHHHHHTC
T ss_pred eEEEEecCcCCC--Ccc-CceEEEEEEEecccCCCCCCCCCeEEEEEEeHHHHHHHHHcCC
Confidence 233444433323 211 2334566665 3322 457888999999999999887654
No 87
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=96.36 E-value=0.0023 Score=55.36 Aligned_cols=98 Identities=14% Similarity=0.222 Sum_probs=64.9
Q ss_pred ceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeeccC
Q 013654 17 SEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDG 96 (439)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~~ 96 (439)
.++||+|++..| ..|++|++.++. +|. . .+++..++.++.|+.+..
T Consensus 26 ~~vLl~~r~~~~-------------g~w~~PgG~ve~--gE~---~---------------~~aa~RE~~EEtGl~~~~- 71 (165)
T 1f3y_A 26 KKIFAASRLDIP-------------DAWQMPQGGIDE--GED---P---------------RNAAIRELREETGVTSAE- 71 (165)
T ss_dssp SCEEEEEETTEE-------------EEEECCEEECCT--TCC---H---------------HHHHHHHHHHHHCCCSEE-
T ss_pred CcEEEEecCCCC-------------CcEECCeeccCC--CCC---H---------------HHHHHHHHHHhhCCChhh-
Confidence 489999987322 589999998864 222 2 478999999999997641
Q ss_pred ceeeeeeeccCCCCCCCC--------------eeeEEEEEeEccCC-----------cccccccccccCHHHHHHHHHh
Q 013654 97 GEWKLWKCVEEPEFGPGL--------------TIHTVYIMGKLLDG-----------NQILQEGCKWMSTQSCINCLAE 150 (439)
Q Consensus 97 ~~~~~~~w~~~~~~~~~~--------------~~dT~f~~a~~p~~-----------~~~e~~~~~W~~~~~al~~~~~ 150 (439)
....+..|++.. .+.+ .-...||++.+..+ +..|.....|++++++.+.+..
T Consensus 72 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 148 (165)
T 1f3y_A 72 VIAEVPYWLTYD--FPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVE 148 (165)
T ss_dssp EEEECSSCCBCC--CCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCG
T ss_pred hhcccccceeee--cCccccccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhh
Confidence 222223333322 1111 12567888887654 2358889999999999987644
No 88
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=96.33 E-value=0.0099 Score=51.10 Aligned_cols=108 Identities=14% Similarity=0.209 Sum_probs=70.4
Q ss_pred eehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
.+++|-|. +.++||+|++..| + ...|.||++.++. +|. . .+++..++
T Consensus 21 v~~vi~~~--~~~vLl~~r~~~~-~----------~g~w~~PgG~ve~--gE~---~---------------~~aa~REl 67 (160)
T 1rya_A 21 LDFIVENS--RGEFLLGKRTNRP-A----------QGYWFVPGGRVQK--DET---L---------------EAAFERLT 67 (160)
T ss_dssp EEEEEECT--TSCEEEEEECSSS-S----------TTSEECCEEECCT--TCC---H---------------HHHHHHHH
T ss_pred EEEEEEcC--CCEEEEEeccCCC-C----------CCEEECCccccCC--CCC---H---------------HHHHHHHH
Confidence 34556553 4589999987532 1 4679999988864 222 1 37799999
Q ss_pred HHHcCCeeccCce---eeeeeeccCCCC--CCCCeeeEEEEEeEccCC----cccccccccccCHHHHHH
Q 013654 86 LEQLGFGVRDGGE---WKLWKCVEEPEF--GPGLTIHTVYIMGKLLDG----NQILQEGCKWMSTQSCIN 146 (439)
Q Consensus 86 l~~~gl~l~~~~~---~~~~~w~~~~~~--~~~~~~dT~f~~a~~p~~----~~~e~~~~~W~~~~~al~ 146 (439)
.++.|+.+....+ ..+.+..+.... .+...+-+.+|.+..+.+ +..|.....|++++++.+
T Consensus 68 ~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 137 (160)
T 1rya_A 68 MAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLA 137 (160)
T ss_dssp HHHHSSCCCGGGSEEEEEEEEEESSBTTBSSSCEEEEEEEEEEECCGGGCCCCSSSEEEEEEECHHHHHH
T ss_pred HHHHCCCCCcccceEEEEEeEEEcccccCCCcCcEEEEEEEEEEcCccccccCCCccceEEEecHHHHhh
Confidence 9999999743322 333333332200 112256778888888766 346888999999998765
No 89
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=96.28 E-value=0.0041 Score=56.09 Aligned_cols=115 Identities=16% Similarity=0.217 Sum_probs=76.4
Q ss_pred ehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHH
Q 013654 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (439)
+.++-++. +.++||+||.++|.+.... -+...|.||++.++ +|. . .+++..++.
T Consensus 49 ~v~~~~~~-~~~vlLv~~~r~~~~~~~~----~~~~~w~lPgG~ve---gE~---~---------------~~aa~REl~ 102 (191)
T 3o6z_A 49 TILLYNTK-KKTVVLIRQFRVATWVNGN----ESGQLIESCAGLLD---NDE---P---------------EVCIRKEAI 102 (191)
T ss_dssp EEEEEETT-TTEEEEEEEECHHHHTTTC----TTCEEEECEEEECC---SSC---H---------------HHHHHHHHH
T ss_pred EEEEEECC-CCEEEEEEcCCccccccCC----CCCeEEEecceEeC---CCC---H---------------HHHHHHHHH
Confidence 34444554 3599999998877532110 03567999999887 543 2 478999999
Q ss_pred HHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC--------cccccccccccCHHHHHHHHHhcC
Q 013654 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--------NQILQEGCKWMSTQSCINCLAEVK 152 (439)
Q Consensus 87 ~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~--------~~~e~~~~~W~~~~~al~~~~~~~ 152 (439)
++.|+.. ..+..+....+.+ + .......+|+|..... ...|.....|++.+++.+++.+.+
T Consensus 103 EEtG~~~--~~~~~l~~~~~~~--~-~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~g~ 171 (191)
T 3o6z_A 103 EETGYEV--GEVRKLFELYMSP--G-GVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKTGE 171 (191)
T ss_dssp HHC-CCC--SCEEEEEEEESCT--T-TBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHHSS
T ss_pred HHhCCcc--CcEEEEEEEEeCC--C-ccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHcCC
Confidence 9999987 3444555433333 2 2344567788876432 256888999999999999998764
No 90
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=96.24 E-value=0.0086 Score=51.05 Aligned_cols=95 Identities=18% Similarity=0.165 Sum_probs=67.0
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|+..+ ..|.||++.++. +|. . .+++..++.++.|+.+..
T Consensus 19 ~~~vLl~~r~~~--------------g~w~~PgG~ve~--gE~---~---------------~~aa~REl~EEtGl~~~~ 64 (149)
T 3son_A 19 NYQFGVLHRTDA--------------DVWQFVAGGGED--EEA---I---------------SETAKRESIEELNLDVDV 64 (149)
T ss_dssp SEEEEEEEESSS--------------SCEECEEEECCT--TCC---H---------------HHHHHHHHHHHHTCCSCC
T ss_pred CeEEEEEEEcCC--------------CCEeCCccccCC--CCC---H---------------HHHHHHHHHHHhCCCccc
Confidence 458999999764 679999998875 333 2 478999999999999877
Q ss_pred Cc--eeeee-----eeccCCCCCCCCeeeEEEEEeEccC--C---cccccccccccCHHHHHHHH
Q 013654 96 GG--EWKLW-----KCVEEPEFGPGLTIHTVYIMGKLLD--G---NQILQEGCKWMSTQSCINCL 148 (439)
Q Consensus 96 ~~--~~~~~-----~w~~~~~~~~~~~~dT~f~~a~~p~--~---~~~e~~~~~W~~~~~al~~~ 148 (439)
.. +..+. +|--+ ........+|.+.++. + ...|.....|++++++.+..
T Consensus 65 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~ 125 (149)
T 3son_A 65 KMYSLDSHASIPNFHFSFN----KPYVVPEYCFAIDLTSCSYQVTLSLEHSELRWVSYESAIQLL 125 (149)
T ss_dssp CEEEEEEEEEEEGGGTCSS----SCSEEEEEEEEEECTTTGGGCCCCTTEEEEEEECHHHHHHHC
T ss_pred ceEEEEeeecccceeeccC----CceEeEEEEEEEEcCCCCCcccCCCceeeEEEeCHHHHHHHh
Confidence 41 11111 22211 2346667889999984 3 12688889999999988753
No 91
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=96.24 E-value=0.0032 Score=54.59 Aligned_cols=103 Identities=18% Similarity=0.333 Sum_probs=71.8
Q ss_pred eehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
.+++|.+ +.++||+|++..| ....|.||++.++. +| +. .+++..++
T Consensus 32 v~~vi~~---~~~vLL~~r~~~~-----------~~~~w~lPgG~ve~--gE---s~---------------~~aa~REl 77 (157)
T 4dyw_A 32 CGAAIVR---DGRILLIKRKRAP-----------EAGCWGLPGGKVDW--LE---PV---------------ERAVCREI 77 (157)
T ss_dssp EEEEEEE---TTEEEEEEECSSS-----------STTCEECCEEECCT--TC---CH---------------HHHHHHHH
T ss_pred EEEEEEE---CCEEEEEEecCCC-----------CCCEEECCcccCCC--CC---CH---------------HHHHHHHH
Confidence 4455555 3599999998643 35689999988764 22 22 47899999
Q ss_pred HHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC-----cccccccccccCHHHHH
Q 013654 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCI 145 (439)
Q Consensus 86 l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~-----~~~e~~~~~W~~~~~al 145 (439)
.++.|+.+....+.....+..+ .....+.+.+|.+....+ +..|.....|++++++.
T Consensus 78 ~EEtGl~~~~~~~~~~~~~~~~---~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~ 139 (157)
T 4dyw_A 78 EEELGIALERATLLCVVDHIDA---ANGEHWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLP 139 (157)
T ss_dssp HHHHSCEEESCEEEEEEEEEET---TTTEEEEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCC
T ss_pred HHHHCcccccCcEEEEEEeecc---CCCcEEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHcc
Confidence 9999999987665544444432 224566777888887766 33677889999887653
No 92
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=96.22 E-value=0.0051 Score=52.53 Aligned_cols=98 Identities=19% Similarity=0.236 Sum_probs=70.8
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|++.++. ...|.||++.++. +|. . .+++..++.++.|+.+..
T Consensus 18 ~~~vLl~~r~~~~~-----------~~~w~lPgG~ve~--gE~---~---------------~~aa~RE~~EEtGl~~~~ 66 (153)
T 2b0v_A 18 DDKYLLVEEIPRGT-----------AIKLNQPAGHLEP--GES---I---------------IQACSREVLEETGHSFLP 66 (153)
T ss_dssp TTEEEEEEECSSSS-----------CCEEECSEEECCT--TSC---H---------------HHHHHHHHHHHHSEEEEE
T ss_pred CCEEEEEEEcCCCC-----------CCeEECCCcCcCC--CCC---H---------------HHHHHHHHHHhhCcEecc
Confidence 45999999976542 3579999999874 322 2 477999999999999887
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCC-----cccccccccccCHHHHHHH
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCINC 147 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~-----~~~e~~~~~W~~~~~al~~ 147 (439)
..+.....|..+. ....+-..+|++....+ ...|.....|++++++.+.
T Consensus 67 ~~~~~~~~~~~~~---~~~~~~~~~f~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 67 EVLTGIYHWTCAS---NGTTYLRFTFSGQVVSFDPDRKLDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp EEEEEEEEEEETT---TTEEEEEEEEEEEEEEECTTSCCCTTEEEEEEEEHHHHHHT
T ss_pred ceEEEEEEEeCCC---CCcEEEEEEEEEEeCCCCCCCCCCCCeeeEEEecHHHHhhh
Confidence 6555544455433 23456667788887654 3467789999999998875
No 93
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=96.19 E-value=0.0096 Score=51.76 Aligned_cols=103 Identities=11% Similarity=0.218 Sum_probs=72.2
Q ss_pred ehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHH
Q 013654 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (439)
+++|.|..+ .++||+|++..+ + ..+|.||++.++. +|. . .+++..++.
T Consensus 14 ~~vi~~~~~-~~vLL~~r~~~~---------~--~g~w~lPgG~ve~--gEs---~---------------~~aa~REl~ 61 (161)
T 3exq_A 14 MVMVTDPET-QRVLVEDKVNVP---------W--KAGHSFPGGHVEV--GEP---C---------------ATAAIREVF 61 (161)
T ss_dssp EEEEBCTTT-CCEEEECCCCCT---------T--TCSBBCCCCBCCT--TSC---H---------------HHHHHHHHH
T ss_pred EEEEEeCCC-CEEEEEEccCCC---------C--CCCEEccceecCC--CCC---H---------------HHHHHHHHH
Confidence 455665442 389999876322 1 2468999987765 332 2 478999999
Q ss_pred HHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC--cccccccccccCHHHH
Q 013654 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSC 144 (439)
Q Consensus 87 ~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~--~~~e~~~~~W~~~~~a 144 (439)
++.|+.+....+.....+..+. ...++...+|.+....+ ..+|.....|++++++
T Consensus 62 EEtGl~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el 118 (161)
T 3exq_A 62 EETGLRLSGVTFCGTCEWFDDD---RQHRKLGLLYRASNFTGTLKASAEGQLSWLPITAL 118 (161)
T ss_dssp HHHCCEESCCEEEEEEEEECSS---CSSEEEEEEEEECCEESCCCGGGTTTEEEECGGGC
T ss_pred HhhCcEecCCcEEEEEecccCC---CCeEEEEEEEEEeccCCccCCCccceEEEeeHHHh
Confidence 9999999877766666665532 35678888888887666 4467778999998875
No 94
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=96.16 E-value=0.0062 Score=55.76 Aligned_cols=114 Identities=18% Similarity=0.263 Sum_probs=74.5
Q ss_pred hhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHH
Q 013654 8 LILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILE 87 (439)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 87 (439)
.++-++. +.++||+||.++|... +.-....|.+|++.++. +|. . .+++..++.+
T Consensus 62 vl~~~~~-~~~vLLvrq~R~~~~~-----~~~~~~~welPgG~ve~--gE~---~---------------~~aA~REl~E 115 (209)
T 1g0s_A 62 LLPFDPV-RDEVVLIEQIRIAAYD-----TSETPWLLEMVAGMIEE--GES---V---------------EDVARREAIE 115 (209)
T ss_dssp EEEEETT-TTEEEEEEEECGGGGG-----GSSCSEEEECEEEECCT--TCC---H---------------HHHHHHHHHH
T ss_pred EEEEECC-CCEEEEEEeecccCCC-----CCCCCeEEEeCcccCCC--CcC---H---------------HHHHHHHHHH
Confidence 3444554 3499999998876431 12224679999999874 332 2 4789999999
Q ss_pred HcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEcc----CC-----cccccccccccCHHHHHHHHHhcC
Q 013654 88 QLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLL----DG-----NQILQEGCKWMSTQSCINCLAEVK 152 (439)
Q Consensus 88 ~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p----~~-----~~~e~~~~~W~~~~~al~~~~~~~ 152 (439)
+.|+... .+.++....+.+ +- ..-...+|+|... .+ ++.|.....|++.+++.+++.+.+
T Consensus 116 EtGl~~~--~~~~l~~~~~~~--g~-~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g~ 184 (209)
T 1g0s_A 116 EAGLIVK--RTKPVLSFLASP--GG-TSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEGK 184 (209)
T ss_dssp HHCCCCC--CEEEEEEEESCT--TT-BCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHTTS
T ss_pred HcCcccC--cEEEeEEEecCC--Cc-cCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcCC
Confidence 9999874 444554443333 21 1234567778742 11 456777899999999999988764
No 95
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=96.10 E-value=0.0081 Score=50.82 Aligned_cols=107 Identities=10% Similarity=0.141 Sum_probs=70.9
Q ss_pred eehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
.+.+|-|+. +.++||+|++.. ...|++|++.++. +|. . .+++..++
T Consensus 12 v~~~i~~~~-~~~vLl~~r~~~-------------~g~w~~PgG~ve~--gE~---~---------------~~aa~RE~ 57 (150)
T 2o1c_A 12 ILVVIYAQD-TKRVLMLQRRDD-------------PDFWQSVTGSVEE--GET---A---------------PQAAMREV 57 (150)
T ss_dssp EEEEEEETT-TCEEEEEECSSS-------------TTCEESEEEECCT--TCC---H---------------HHHHHHHH
T ss_pred EEEEEEeCC-CCEEEEEEecCC-------------CCceECCccccCC--CCC---H---------------HHHHHHHH
Confidence 445566554 348999987653 3589999998874 332 1 47789999
Q ss_pred HHHcCCeeccCce--eeee---------eeccCCCCCCCCeeeEEEEEeEccCCc---ccccccccccCHHHHHHH
Q 013654 86 LEQLGFGVRDGGE--WKLW---------KCVEEPEFGPGLTIHTVYIMGKLLDGN---QILQEGCKWMSTQSCINC 147 (439)
Q Consensus 86 l~~~gl~l~~~~~--~~~~---------~w~~~~~~~~~~~~dT~f~~a~~p~~~---~~e~~~~~W~~~~~al~~ 147 (439)
.++.|+.+....+ ..+. .|...-. .......+.+|.+....+. ..|.....|++++++.+.
T Consensus 58 ~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 132 (150)
T 2o1c_A 58 KEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYA-PGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAAL 132 (150)
T ss_dssp HHHHCCCHHHHTCCEEEEEEEEEEECCGGGGGGBC-TTCCEEEEEEEEEEESSCCCCCCSSSSCEEEEEHHHHHHH
T ss_pred HHHhCCCccccceeEEeeeceeeeeeecccccccC-CCCcceEEEEEEEEcCCCCCcChhHhhccEeecHHHHHhh
Confidence 9999999877532 1111 1111110 1134577888888887662 368889999999998875
No 96
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=96.07 E-value=0.0066 Score=51.42 Aligned_cols=104 Identities=16% Similarity=0.258 Sum_probs=66.1
Q ss_pred hhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHH
Q 013654 8 LILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILE 87 (439)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 87 (439)
.+|-|.. +.++||+|. ++ ..|.+|++.++. +|. . .+++..++.+
T Consensus 23 ~vi~~~~-~~~vLl~~r--~~-------------g~w~~PgG~ve~--gE~---~---------------~~aa~RE~~E 66 (148)
T 2azw_A 23 IIVSKPE-NNTMVLVQA--PN-------------GAYFLPGGEIEG--TET---K---------------EEAIHREVLE 66 (148)
T ss_dssp EECEEGG-GTEEEEEEC--TT-------------SCEECSEEECCT--TCC---H---------------HHHHHHHHHH
T ss_pred EEEECCC-CCeEEEEEc--CC-------------CCEeCCCcccCC--CCC---H---------------HHHHHHHHHH
Confidence 4555443 358999985 21 589999988874 332 1 3779999999
Q ss_pred HcCCeeccCcee-eeeeeccCCCCCC-CCeeeEEEEEeEccCC---cccccccccccCHHHHHHHH
Q 013654 88 QLGFGVRDGGEW-KLWKCVEEPEFGP-GLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINCL 148 (439)
Q Consensus 88 ~~gl~l~~~~~~-~~~~w~~~~~~~~-~~~~dT~f~~a~~p~~---~~~e~~~~~W~~~~~al~~~ 148 (439)
+.|+.+....+. .+..+..+.. +. .....+.||.+....+ ...|.....|++++++.+.+
T Consensus 67 EtGl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~ 131 (148)
T 2azw_A 67 ELGISVEIGCYLGEADEYFYSNH-RQTAYYNPGYFYVANTWRQLSEPLERTNTLHWVAPEEAVRLL 131 (148)
T ss_dssp HHSEEEEEEEEEEEEEEEEEETT-TTEEEEEEEEEEEEEEEEECSSCC-CCSEEEEECHHHHHHHB
T ss_pred HhCCeeEeeeEEEEEEEEEcCCC-CCcceEEEEEEEEEEcCcCCcCCCCceeeEEEeeHHHHHhhh
Confidence 999998664433 2322333320 11 1223477788877654 33566789999999988753
No 97
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=95.88 E-value=0.0063 Score=53.97 Aligned_cols=96 Identities=14% Similarity=0.070 Sum_probs=66.7
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|+..++ ....|.||++.++. +|. . .+++..++.++.|+.+..
T Consensus 35 ~~~vLL~~r~~~~-----------~~g~W~lPgG~ve~--gEs---~---------------~~aa~REl~EEtGl~~~~ 83 (176)
T 3q93_A 35 PQRVLLGMKKRGF-----------GAGRWNGFGGKVQE--GET---I---------------EDGARRELQEESGLTVDA 83 (176)
T ss_dssp SSEEEEEEECSST-----------TTTSEECEEEECCT--TSC---H---------------HHHHHHHHHHHHSCEESC
T ss_pred CCEEEEEEEcCCC-----------CCCeEECceecCCC--CCC---H---------------HHHHHHHHHHHHCCccee
Confidence 4599999886543 25789999998764 222 2 478999999999999975
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCC--cccccccccccCHHHHH
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCI 145 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~--~~~e~~~~~W~~~~~al 145 (439)
..+.....+..+ +.+..+...+|++....+ ...|.....|++++++.
T Consensus 84 ~~~l~~~~~~~~---~~~~~~~~~~f~~~~~~~~~~~~e~~~~~W~~~~el~ 132 (176)
T 3q93_A 84 LHKVGQIVFEFV---GEPELMDVHVFCTDSIQGTPVESDEMRPCWFQLDQIP 132 (176)
T ss_dssp CEEEEEEEEEET---TCSCEEEEEEEEESCEESCCCCCSSEEEEEEETTCCC
T ss_pred eEEEEEEEEEcC---CCCcEEEEEEEEEECCCCCcCCCcceeeEEeeHHHcc
Confidence 554444444332 335677888899887666 33456667999887654
No 98
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=95.88 E-value=0.0066 Score=53.85 Aligned_cols=102 Identities=18% Similarity=0.108 Sum_probs=70.0
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+||.++|. +...|.+|++.++. +|. . .+++..++.++.|+.+.
T Consensus 52 ~~~vLL~~r~~~~~----------~~~~w~~PgG~ve~--gEs---~---------------~~aa~REl~EEtGl~~~- 100 (182)
T 2yvp_A 52 RGTALLVRQYRHPT----------GKFLLEVPAGKVDE--GET---P---------------EAAARRELREEVGAEAE- 100 (182)
T ss_dssp TSEEEEEEEEEGGG----------TEEEEECCEEECCT--TCC---H---------------HHHHHHHHHHHHCEECS-
T ss_pred CCEEEEEEeccCCC----------CCcEEEeccccCCC--CcC---H---------------HHHHHHHHHHHhCCCcc-
Confidence 34899999976542 35689999998874 332 2 47899999999999865
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccC--C----cccccccccccCHHHHHHHHHhcC
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLD--G----NQILQEGCKWMSTQSCINCLAEVK 152 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~--~----~~~e~~~~~W~~~~~al~~~~~~~ 152 (439)
.+..+..+...+ +. ....+.+|++.... + +..|.....|++++++.+.+...+
T Consensus 101 -~~~~l~~~~~~~--~~-~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~ 159 (182)
T 2yvp_A 101 -TLIPLPSFHPQP--SF-TAVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLAKGE 159 (182)
T ss_dssp -CEEECCCBCSCT--TT-BCCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHHTTC
T ss_pred -cEEEEEEEeCCC--Cc-cccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHHcCC
Confidence 344454443322 22 23445666665321 2 557889999999999999988654
No 99
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=95.86 E-value=0.014 Score=52.77 Aligned_cols=104 Identities=16% Similarity=0.245 Sum_probs=66.2
Q ss_pred hhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHH
Q 013654 8 LILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILE 87 (439)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 87 (439)
.+|-+..+ .++||+|...| ....|.||++.++. +|. . .+++..++.+
T Consensus 31 ~~v~~~~~-~~vLL~~r~~~------------~~g~w~lPGG~ve~--gEs---~---------------~~aA~REl~E 77 (199)
T 3h95_A 31 GAVFDEST-RKILVVQDRNK------------LKNMWKFPGGLSEP--EED---I---------------GDTAVREVFE 77 (199)
T ss_dssp EEEEETTT-TEEEEEEESSS------------STTSBBCCEEECCT--TCC---H---------------HHHHHHHHHH
T ss_pred EEEEeCCC-CEEEEEEEcCC------------CCCCEECCccccCC--CCC---H---------------HHHHHHHHHH
Confidence 34444443 48999987553 14789999998874 333 1 4789999999
Q ss_pred HcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC------cccccccccccCHHHHHHH
Q 013654 88 QLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG------NQILQEGCKWMSTQSCINC 147 (439)
Q Consensus 88 ~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~------~~~e~~~~~W~~~~~al~~ 147 (439)
+.|+.+....+..+..+.+.+ +.. ..-+.||++.+..+ +..|...+.|++.+++.+.
T Consensus 78 EtGl~~~~~~l~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 140 (199)
T 3h95_A 78 ETGIKSEFRSVLSIRQQHTNP--GAF-GKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKT 140 (199)
T ss_dssp HHCCCEEEEEEEEEEECC------------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHC
T ss_pred HhCCccccceEEEEEeeecCC--CCc-eeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhh
Confidence 999998866665544333333 211 22245556555322 4578899999999998875
No 100
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=95.61 E-value=0.011 Score=51.79 Aligned_cols=101 Identities=19% Similarity=0.277 Sum_probs=65.9
Q ss_pred eeehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHH
Q 013654 5 NVALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQ 84 (439)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (439)
..+.+|.+ +.++||+||... ...|.+|++.++. +|. . .+++..+
T Consensus 25 ~v~~ii~~---~~~vLL~~r~~~-------------~~~w~~PgG~ve~--gEs---~---------------~~aa~RE 68 (171)
T 3id9_A 25 RVTGILIE---DEKVLLVKQKVA-------------NRDWSLPGGRVEN--GET---L---------------EEAMIRE 68 (171)
T ss_dssp EEEEEEEE---TTEEEEEECSST-------------TCCEECCEEECCT--TCC---H---------------HHHHHHH
T ss_pred EEEEEEEE---CCEEEEEEEECC-------------CCeEECCCccCCC--CCC---H---------------HHHHHHH
Confidence 34555553 459999999762 6789999988764 222 2 4789999
Q ss_pred HHHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC---------cccccccccccCHHHHHH
Q 013654 85 ILEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---------NQILQEGCKWMSTQSCIN 146 (439)
Q Consensus 85 ~l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~---------~~~e~~~~~W~~~~~al~ 146 (439)
+.++.|+.+....+.....+.. ... .....+|.+....+ +..|.....|++++++.+
T Consensus 69 l~EEtGl~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~ 134 (171)
T 3id9_A 69 MREETGLEVKIKKLLYVCDKPD----ASP-SLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSY 134 (171)
T ss_dssp HHHHHCCCEEEEEEEEEEEETT----SSS-CEEEEEEEEEEC-------------CCCCCEEEEETGGGGG
T ss_pred HHHHHCCccccceEEEEEcccC----CCC-cEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhh
Confidence 9999999987655544433322 223 34445566665544 336778899999988765
No 101
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=95.60 E-value=0.019 Score=48.06 Aligned_cols=96 Identities=18% Similarity=0.277 Sum_probs=63.8
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|++..+.+ ..+|.||++.++. +|. . .+++..++.++.|+.+..
T Consensus 19 ~~~vLl~~r~~~~~~----------~g~w~lPgG~ve~--gE~---~---------------~~aa~RE~~EE~Gl~~~~ 68 (140)
T 2rrk_A 19 DGKILLAQRPAQSDQ----------AGLWEFAGGKVEP--DES---Q---------------RQALVRELREELGIEATV 68 (140)
T ss_dssp TTEEEEEECCSSCSC----------CCCEECCEEECCT--TSC---H---------------HHHHHHHHHHHSCEEEEC
T ss_pred CCEEEEEEcCCCCCC----------CCEEECCceecCC--CCC---H---------------HHHHHHHHHHHHCCeeec
Confidence 448999998654322 4689999988764 222 1 467889999999999875
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCC--cccccccccccCHHHHHH
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCIN 146 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~--~~~e~~~~~W~~~~~al~ 146 (439)
..+..-..+.. ..+.....+|.+....+ ...|.....|++++++.+
T Consensus 69 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 116 (140)
T 2rrk_A 69 GEYVASHQREV-----SGRIIHLHAWHVPDFHGTLQAHEHQALVWCSPEEALQ 116 (140)
T ss_dssp CEEEEEEEEEE-----TTEEEEEEEEEESEEEECCCCSSCSCEEEECHHHHTT
T ss_pred ccEEEEEEEec-----CCcEEEEEEEEEEeeCCCcCCCccceeEEeCHHHHhh
Confidence 54332222222 23466778888876554 335667889999988654
No 102
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=95.57 E-value=0.011 Score=50.16 Aligned_cols=105 Identities=19% Similarity=0.332 Sum_probs=65.8
Q ss_pred ehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHH
Q 013654 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (439)
+.+|-+.. +.++||+|+.. ...|.||++.++. +|. . .+++..++.
T Consensus 8 ~~~i~~~~-~~~vLl~~r~~--------------~g~w~~PgG~ve~--gEs---~---------------~~aa~RE~~ 52 (146)
T 2jvb_A 8 GAAIFNEN-LSKILLVQGTE--------------SDSWSFPRGKISK--DEN---D---------------IDCCIREVK 52 (146)
T ss_dssp EEEEBCTT-SSEEEEECCSS--------------SSCCBCCEECCCS--SSC---H---------------HHHHHHHHH
T ss_pred EEEEEeCC-CCEEEEEEEcC--------------CCcEECCcccCCC--CCC---H---------------HHHHHHHHH
Confidence 44555443 35999999652 2689999988763 332 2 478999999
Q ss_pred HHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC------cccccccccccCHHHHHHHHHhc
Q 013654 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG------NQILQEGCKWMSTQSCINCLAEV 151 (439)
Q Consensus 87 ~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~------~~~e~~~~~W~~~~~al~~~~~~ 151 (439)
++.|+.+.. +..+.++.+.. ...+.+ +.|++..+... +..|.....|++++++.+.+...
T Consensus 53 EEtGl~~~~--~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 118 (146)
T 2jvb_A 53 EEIGFDLTD--YIDDNQFIERN--IQGKNY-KIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYKS 118 (146)
T ss_dssp HHTSCCCSS--SSCSSCEEEEE--ETTEEE-EEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGCS
T ss_pred HHHCCCchH--hcccccccccc--cCCceE-EEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhccc
Confidence 999998763 23344444432 222233 23443333321 35688899999999998865543
No 103
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=95.54 E-value=0.012 Score=49.41 Aligned_cols=103 Identities=19% Similarity=0.176 Sum_probs=65.7
Q ss_pred eehhhcCCCCCce--eEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHH
Q 013654 6 VALILKNPLNDSE--FLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALN 83 (439)
Q Consensus 6 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (439)
.+++|-+-.++.+ +||+|++..|. .|.||++.++.- | +. .+++..
T Consensus 12 v~~vi~~~~~~~~~~vLl~~r~~~~~-------------~w~~PgG~ve~g--E---~~---------------~~aa~R 58 (139)
T 2yyh_A 12 TDVIIRLWDGENFKGIVLIERKYPPV-------------GLALPGGFVEVG--E---RV---------------EEAAAR 58 (139)
T ss_dssp EEEEEEEEETTEEEEEEEEEECSSSC-------------SEECCEEECCTT--C---CH---------------HHHHHH
T ss_pred EEEEEEEEcCCCcEEEEEEEecCCCC-------------cEECccccCCCC--C---CH---------------HHHHHH
Confidence 3444544222335 99999986542 299999998742 2 22 478999
Q ss_pred HHHHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC---cccccccccccCHHHHH
Q 013654 84 QILEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCI 145 (439)
Q Consensus 84 ~~l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~---~~~e~~~~~W~~~~~al 145 (439)
++.++.|+.+....+. ..+ +.+...+....-+.+|++.. .+ ...|.....|++++++.
T Consensus 59 E~~EEtGl~~~~~~~~--~~~-~~~~~~~~~~~~~~~f~~~~-~~~~~~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 59 EMREETGLEVRLHKLM--GVY-SDPERDPRAHVVSVVWIGDA-QGEPKAGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp HHHHHHCCCCEEEEEE--EEE-CCTTSCTTSCEEEEEEEEEE-ESCCCCCTTEEEEEEECTTSCC
T ss_pred HHHHHHCCCcccceEE--EEE-CCCCcCCCceEEEEEEEEec-CCccCCCCCcceEEEEEHHHCC
Confidence 9999999987654332 222 22211333456677888887 34 33577789999987754
No 104
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=95.51 E-value=0.0086 Score=54.82 Aligned_cols=107 Identities=18% Similarity=0.169 Sum_probs=69.3
Q ss_pred hcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHc
Q 013654 10 LKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQL 89 (439)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 89 (439)
+.+..+..++||+||.++|. +...|.||++.++. +|. . .+++..++.++.
T Consensus 70 ~~~~~~~~~vlLv~q~R~~~----------~~~~welPgG~ve~--gEs---~---------------~~aA~REl~EEt 119 (212)
T 2dsc_A 70 LQRTLHYECIVLVKQFRPPM----------GGYCIEFPAGLIDD--GET---P---------------EAAALRELEEET 119 (212)
T ss_dssp EECTTSCCEEEEEEEEEGGG----------TEEEEECCEEECCT--TCC---H---------------HHHHHHHHHHHH
T ss_pred EeCCCCCcEEEEEEeecCCC----------CCcEEECCccccCC--CCC---H---------------HHHHHHHHHHHh
Confidence 44443345899999987763 34579999999874 332 2 478999999999
Q ss_pred CCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEcc---------CC--cccccccccccCHHHHHHHHHhc
Q 013654 90 GFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLL---------DG--NQILQEGCKWMSTQSCINCLAEV 151 (439)
Q Consensus 90 gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p---------~~--~~~e~~~~~W~~~~~al~~~~~~ 151 (439)
|+......+ +..+.+.+ +.. ....++|++... .. +..|.....|++.+++.+++...
T Consensus 120 Gl~~~~~~~--l~~~~~~~--~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~ 187 (212)
T 2dsc_A 120 GYKGDIAEC--SPAVCMDP--GLS-NCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLDAL 187 (212)
T ss_dssp CCCCEEEEE--CCCEESCT--TTB-CCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHHHH
T ss_pred CCCccceEE--eccEEcCC--Ccc-CceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHHhc
Confidence 998653322 22222223 111 123455666521 11 45788999999999999988743
No 105
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=95.49 E-value=0.016 Score=49.21 Aligned_cols=96 Identities=15% Similarity=0.192 Sum_probs=69.1
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|++..+. ...+|.||++.++.- | +. .+++..++.++.|+.+..
T Consensus 32 ~~~vLl~~r~~~~~----------~~g~w~~PgG~ve~g--E---~~---------------~~aa~RE~~EE~Gl~~~~ 81 (153)
T 3ees_A 32 DGKILVGQRPENNS----------LAGQWEFPGGKIENG--E---TP---------------EEALARELNEELGIEAEV 81 (153)
T ss_dssp TTEEEEEECCTTST----------TTTCEECSEEECCTT--C---CH---------------HHHHHHHHHHHHSCEEEC
T ss_pred CCEEEEEEeCCCCC----------CCCeEECCceeeCCC--C---CH---------------HHHHHHHHHHHHCCcccc
Confidence 35999999875421 246899999887642 2 11 467889999999999887
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCC--cccccccccccCHHHHHH
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCIN 146 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~--~~~e~~~~~W~~~~~al~ 146 (439)
..+.....+..+ .+.+...+|.+....+ +..|.....|++++++.+
T Consensus 82 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 129 (153)
T 3ees_A 82 GELKLACTHSYG-----DVGILILFYEILYWKGEPRAKHHMMLEWIHPEELKH 129 (153)
T ss_dssp CCEEEEEEEEET-----TEEEEEEEEEECEEESCCCCSSSSEEEEECGGGGGG
T ss_pred CceEEEEEEecC-----CCeEEEEEEEEEECCCCcCCCccceEEEecHHHhhh
Confidence 776555444432 4577788999888776 456788899999887643
No 106
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=95.48 E-value=0.0096 Score=53.36 Aligned_cols=99 Identities=21% Similarity=0.251 Sum_probs=68.9
Q ss_pred eehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
.++||.+ +.++||+|+..+|. ...|.||++.++. +|. . .+++..++
T Consensus 43 v~~ii~~---~~~vLL~~r~~~~~-----------~g~w~lPgG~ve~--gEs---~---------------~~aa~REl 88 (189)
T 3cng_A 43 VGCIPEW---ENKVLLCKRAIAPY-----------RGKWTLPAGFMEN--NET---L---------------VQGAARET 88 (189)
T ss_dssp EEEEEEE---TTEEEEEEESSSSS-----------TTCEECSEEECCT--TCC---H---------------HHHHHHHH
T ss_pred EEEEEEe---CCEEEEEEccCCCC-----------CCeEECceeeccC--CCC---H---------------HHHHHHHH
Confidence 3445554 44999999987642 2479999998874 222 2 47899999
Q ss_pred HHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC---cccccccccccCHHHHH
Q 013654 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCI 145 (439)
Q Consensus 86 l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~---~~~e~~~~~W~~~~~al 145 (439)
.++.|+.+....+..+..+ + ....-+.+|++....+ ...|.....|++++++.
T Consensus 89 ~EEtGl~~~~~~~~~~~~~--~-----~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 89 LEEANARVEIRELYAVYSL--P-----HISQVYMLFRAKLLDLDFFPGIESLEVRLFGEQEIP 144 (189)
T ss_dssp HHHHCCCEEEEEEEEEEEE--G-----GGTEEEEEEEEEECCSCCCCCTTEEEEEEECTTTCC
T ss_pred HHHHCCccccceeEEEEec--C-----CCcEEEEEEEEEeCCCccCCCccceeEEEECHHHcC
Confidence 9999999886655544322 1 2255677888888766 34677789999887753
No 107
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=95.47 E-value=0.013 Score=53.36 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=64.5
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+||.++|. ....|.||++.++. .+|. . .+++..++.++.|+.+..
T Consensus 54 ~~~vLLvrr~r~~~----------~~~~w~lPgG~ve~-~gEs---~---------------~~aa~REl~EEtGl~~~~ 104 (207)
T 1mk1_A 54 NGNIPMVYQYRHTY----------GRRLWELPAGLLDV-AGEP---P---------------HLTAARELREEVGLQAST 104 (207)
T ss_dssp TSEEEEEEEEETTT----------TEEEEECCEEECCS-TTCC---H---------------HHHHHHHHHHHHCEEEEE
T ss_pred CCEEEEEEeecCCC----------CCcEEEeCCccccC-CCCC---H---------------HHHHHHHHHHHHCCcccc
Confidence 45999999987763 25689999988762 1222 2 478999999999998864
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCC-------cccccccccccCHHHHHHHHHhcC
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-------NQILQEGCKWMSTQSCINCLAEVK 152 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~-------~~~e~~~~~W~~~~~al~~~~~~~ 152 (439)
. ..+....+.+ +.. .....+|++....+ +..|.....|++.+++.+++...+
T Consensus 105 ~--~~l~~~~~~~--~~~-~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~ 163 (207)
T 1mk1_A 105 W--QVLVDLDTAP--GFS-DESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRGE 163 (207)
T ss_dssp E--EEEEEECSCT--TTB-CCCEEEEEEEEEEECCC----------CEEEEEHHHHHHHHHTTS
T ss_pred c--EEEEEEEcCC--Ccc-ccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHHcCC
Confidence 3 2333332222 111 11345666654332 356778999999999999887764
No 108
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=95.39 E-value=0.0065 Score=52.14 Aligned_cols=100 Identities=15% Similarity=0.240 Sum_probs=65.7
Q ss_pred eehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
.+++|.+ +.++||+|+ ...|.||++.++. +|. . .+++..++
T Consensus 22 ~~~ii~~---~~~vLl~~r----------------~~~w~lPgG~ve~--gE~---~---------------~~aa~REl 62 (154)
T 2pqv_A 22 ATALIVQ---NHKLLVTKD----------------KGKYYTIGGAIQV--NES---T---------------EDAVVREV 62 (154)
T ss_dssp EEECCEE---TTEEEEEEE----------------TTEEECEEEECBT--TCC---H---------------HHHHHHHH
T ss_pred EEEEEEE---CCEEEEEec----------------CCeEECcccCcCC--CCC---H---------------HHHHHHHH
Confidence 3455553 459999998 3469999998774 222 2 47899999
Q ss_pred HHHcCCeeccCceeeeeee-ccCCCCCCCCeeeEEEEEeEccCCc------ccccccccccCHHHHHH
Q 013654 86 LEQLGFGVRDGGEWKLWKC-VEEPEFGPGLTIHTVYIMGKLLDGN------QILQEGCKWMSTQSCIN 146 (439)
Q Consensus 86 l~~~gl~l~~~~~~~~~~w-~~~~~~~~~~~~dT~f~~a~~p~~~------~~e~~~~~W~~~~~al~ 146 (439)
.++.|+.+....+.....+ .+.. +..-..-+.+|.+.++.+. +.|.....|++++++.+
T Consensus 63 ~EEtGl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 128 (154)
T 2pqv_A 63 KEELGVKAQAGQLAFVVENRFEVD--GVSYHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQN 128 (154)
T ss_dssp HHHHCCCEEEEEEEEEEEEEEEET--TEEEEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGG
T ss_pred HHHhCCeeeeceEEEEEeeeecCC--CCcceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhh
Confidence 9999999887665443332 2322 1111223457888887662 34577899999888654
No 109
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=95.28 E-value=0.026 Score=50.41 Aligned_cols=115 Identities=10% Similarity=0.124 Sum_probs=71.4
Q ss_pred ehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCC-CccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDL-PAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
+.+|-|. +.++||+|++.... .....|++ |++.++. +|. . .+++..++
T Consensus 36 ~~~i~~~--~g~vLl~~R~~~~~---------~~~g~w~~~PgG~ve~--gEt---~---------------~~aa~REl 84 (190)
T 1hzt_A 36 SSWLFNA--KGQLLVTRRALSKK---------AWPGVWTNSVCGHPQL--GES---N---------------EDAVIRRC 84 (190)
T ss_dssp EEEEECT--TCCEEEEEECTTCS---------SSTTCEEESEEECCCT--TCC---H---------------HHHHHHHH
T ss_pred EEEEEcC--CCEEEEEEeCCCCC---------CCCCcccCcccccCCC--CCC---H---------------HHHHHHHH
Confidence 3455553 34899988764322 12357999 8888764 222 2 47899999
Q ss_pred HHHcCCeeccC-ceeeeeeeccCCCCCCCCeeeEEEEEeEccCC---cccccccccccCHHHHHHHHHhcC
Q 013654 86 LEQLGFGVRDG-GEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINCLAEVK 152 (439)
Q Consensus 86 l~~~gl~l~~~-~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~---~~~e~~~~~W~~~~~al~~~~~~~ 152 (439)
.++.|+.+..- ....-..|..+..-+...+.-+.+|++..+.. +..|.....|++++++.+.+.+.+
T Consensus 85 ~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~ 155 (190)
T 1hzt_A 85 RYELGVEITPPESIYPDFRYRATDPSGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLHGIDATP 155 (190)
T ss_dssp HHHHCCCBSCCEEEETTCEEEEECTTSCEEEEECCEEEEEBCSCCCCCTTTEEEEEEECHHHHHHHHHHCG
T ss_pred HHHHCCCchhhheeeeeEEEEeeCCCCCcceEEEEEEEEecCCCCcCCccceeeEEEecHHHHHHHHHcCh
Confidence 99999988763 22111122211100112244456778887543 456888999999999999887653
No 110
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=95.18 E-value=0.0082 Score=54.46 Aligned_cols=100 Identities=16% Similarity=0.137 Sum_probs=68.2
Q ss_pred eeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeeccCc
Q 013654 18 EFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGG 97 (439)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~~~ 97 (439)
++||+||.++|. +...|.||++.++. +|. . .+++..++.++.|+....
T Consensus 61 ~vLLvrq~r~~~----------~~~~welPgG~ve~--gEs---~---------------~~aA~REl~EEtGl~~~~-- 108 (198)
T 1vhz_A 61 HLILIREYAVGT----------ESYELGFSKGLIDP--GES---V---------------YEAANRELKEEVGFGAND-- 108 (198)
T ss_dssp EEEEEEEEETTT----------TEEEEECEEEECCT--TCC---H---------------HHHHHHHHHHHHSEEEEE--
T ss_pred EEEEEEcccCCC----------CCcEEEeCcccCCC--CcC---H---------------HHHHHHHHHHHHCCCcCc--
Confidence 999999987653 35679999998874 332 2 478999999999998753
Q ss_pred eeeeeeeccCCCCCCCCeeeEEEEEeEccCC-----cccccccccccCHHHHHHHHHhcC
Q 013654 98 EWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCINCLAEVK 152 (439)
Q Consensus 98 ~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~-----~~~e~~~~~W~~~~~al~~~~~~~ 152 (439)
+..+......+ +.. .....+|+|....+ +..|.....|++.+++.+++...+
T Consensus 109 ~~~l~~~~~~~--~~~-~~~~~~f~a~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~ 165 (198)
T 1vhz_A 109 LTFLKKLSMAP--SYF-SSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLEDPD 165 (198)
T ss_dssp EEEEEEEECCT--TTC-CCEEEEEEEEEEEECCCCCCCSSCCCEEEEEGGGGGGGGGCTT
T ss_pred eEEEEEEeCCC--Ccc-CcEEEEEEEEeCCcccCCCCCCceEEEEEEEHHHHHHHHHcCC
Confidence 33333333333 212 23345666664322 557888899999999998876653
No 111
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=95.07 E-value=0.008 Score=53.97 Aligned_cols=93 Identities=16% Similarity=0.240 Sum_probs=65.4
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|++. ...|.||++.++. +|. . .+++..++.++.|+.+..
T Consensus 14 ~~~vLL~~r~~--------------~g~W~lPGG~ve~--gEs---~---------------~~aa~REl~EEtGl~~~~ 59 (188)
T 3fk9_A 14 HDQVLLLQKPR--------------RGWWVAPGGKMEA--GES---I---------------LETVKREYWEETGITVKN 59 (188)
T ss_dssp TTEEEEEECTT--------------TCCEECCEEECCT--TCC---H---------------HHHHHHHHHHHHSCEESS
T ss_pred CCEEEEEEeCC--------------CCeEECCeecccC--CCC---H---------------HHHHHHHHHHHHCCCCCC
Confidence 35999999731 4689999988764 222 2 478999999999999987
Q ss_pred CceeeeeeeccCCCCCCC--CeeeEEEEEeEccCC---cccccccccccCHHHH
Q 013654 96 GGEWKLWKCVEEPEFGPG--LTIHTVYIMGKLLDG---NQILQEGCKWMSTQSC 144 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~--~~~dT~f~~a~~p~~---~~~e~~~~~W~~~~~a 144 (439)
..+.....+..+. +.. ..+.+.+|.+....+ ..+|.....|++++++
T Consensus 60 ~~~~~~~~~~~~~--~~~~~~~~~~~~f~a~~~~~~~~~~~e~~~~~W~~~~el 111 (188)
T 3fk9_A 60 PELKGIFSMVIFD--EGKIVSEWMLFTFKATEHEGEMLKQSPEGKLEWKKKDEV 111 (188)
T ss_dssp CEEEEEEEEEEEE--TTEEEEEEEEEEEEESCEESCCCSEETTEEEEEEEGGGG
T ss_pred ceEEEEEEEEecC--CCcceEEEEEEEEEEECCCCCCcCCCCCEeEEEEEHHHh
Confidence 7666555555543 221 334678888887766 2345568999998875
No 112
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=94.96 E-value=0.029 Score=50.65 Aligned_cols=97 Identities=19% Similarity=0.234 Sum_probs=63.4
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+||...| ..|.||++.++. +|. . .+++..++.++.|+.+..
T Consensus 53 ~~~vLLv~r~~~~-------------g~W~lPgG~ve~--gEt---~---------------~eaa~REl~EEtGl~~~~ 99 (194)
T 2fvv_A 53 EEEVLLVSSSRHP-------------DRWIVPGGGMEP--EEE---P---------------SVAAVREVCEEAGVKGTL 99 (194)
T ss_dssp CCEEEEEECSSCT-------------TSEECSEEECCT--TCC---H---------------HHHHHHHHHHHHCEEEEE
T ss_pred CCEEEEEEEeCCC-------------CcEECCCCcCCC--CcC---H---------------HHHHHHHHHHHhCCcccc
Confidence 4599999987532 479999998874 332 2 478999999999998765
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCC-c---c--cccccccccCHHHHHHHHHhcC
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-N---Q--ILQEGCKWMSTQSCINCLAEVK 152 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~-~---~--~e~~~~~W~~~~~al~~~~~~~ 152 (439)
..+ +..+-. . .+...+.+|++.++.. + . .+.....|++++++.+++...+
T Consensus 100 ~~~--l~~~~~-~----~~~~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~~~~ 155 (194)
T 2fvv_A 100 GRL--VGIFEN-Q----ERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHK 155 (194)
T ss_dssp EEE--EEEEEE-T----TTTEEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHTTTC
T ss_pred ceE--EEEEEc-C----CCceEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHhcCc
Confidence 433 222222 1 1233456777766432 1 1 1335789999999998776543
No 113
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=94.93 E-value=0.02 Score=49.07 Aligned_cols=99 Identities=18% Similarity=0.283 Sum_probs=66.1
Q ss_pred eehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
.+.+|.|. +.++||+|+..+| ....|.||++.++. +|. . .+++..++
T Consensus 23 v~~~i~~~--~~~vLl~~r~~~~-----------~~~~w~~PgG~ve~--gE~---~---------------~~aa~REl 69 (156)
T 3gg6_A 23 VLAVFLSE--QDEVLLIQEAKRE-----------CRGSWYLPAGRMEP--GET---I---------------VEALQREV 69 (156)
T ss_dssp EEEECBCT--TSEEEEEECCCTT-----------STTCEECSEEECCT--TCC---H---------------HHHHHHHH
T ss_pred EEEEEEeC--CCEEEEEEecCCC-----------CCCEEECCeeeccC--CCC---H---------------HHHHHHHH
Confidence 45556654 3499999998654 24689999998764 222 2 47899999
Q ss_pred HHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC-------cccccccccccCHHHHH
Q 013654 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG-------NQILQEGCKWMSTQSCI 145 (439)
Q Consensus 86 l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~-------~~~e~~~~~W~~~~~al 145 (439)
.++.|+.+....+.... . . ...+-+.+|++....+ ++.|.....|++.+++.
T Consensus 70 ~EEtGl~~~~~~~~~~~---~-~----~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~ 128 (156)
T 3gg6_A 70 KEEAGLHCEPETLLSVE---E-R----GPSWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLP 128 (156)
T ss_dssp HHHHCEEEEEEEEEEEE---E-S----STTEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCC
T ss_pred HHhhCceeEeeeEEEEE---c-C----CCCEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCc
Confidence 99999988755433221 1 1 1234556777777655 33577789999887653
No 114
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=94.87 E-value=0.033 Score=46.79 Aligned_cols=105 Identities=20% Similarity=0.298 Sum_probs=70.8
Q ss_pred ehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHH
Q 013654 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (439)
+.+|.+. +.++||+|++.... -..+|.||++.++. +|. . .+++..++.
T Consensus 12 ~~vi~~~--~~~vLl~~r~~~~~----------~~g~w~lPgG~ve~--gE~---~---------------~~aa~RE~~ 59 (144)
T 3r03_A 12 AAALIDP--DGRVLLAQRPPGKS----------LAGLWEFPGGKLEP--GET---P---------------EAALVRELA 59 (144)
T ss_dssp EEEEBCT--TSCEEEEECCTTSS----------STTCEECSEEECCT--TCC---H---------------HHHHHHHHH
T ss_pred EEEEEcC--CCEEEEEEeCCCCC----------CCCcEECCCcEecC--CCC---H---------------HHHHHHHHH
Confidence 4455543 34899998764321 24679999987764 222 1 477899999
Q ss_pred HHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC--cccccccccccCHHHHHH
Q 013654 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCIN 146 (439)
Q Consensus 87 ~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~--~~~e~~~~~W~~~~~al~ 146 (439)
++.|+.+....+..+... +.. ...++....+|.+....+ ...|.....|++++++.+
T Consensus 60 EE~Gl~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 118 (144)
T 3r03_A 60 EELGVDTRASCLAPLAFA-SHS--YDTFHLLMPLYACRSWRGRATAREGQTLAWVRAERLRE 118 (144)
T ss_dssp HHHCCBCCGGGCEEEEEE-EEE--CSSSEEEEEEEEECCCBSCCCCCSSCEEEEECGGGGGG
T ss_pred HHhCceeeccceEEEEee-ecc--CCCeEEEEEEEEEEecCCccCCCCcceEEEEeHHHhcc
Confidence 999999888755544222 112 235678888999988766 446778899999877543
No 115
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=94.86 E-value=0.036 Score=49.52 Aligned_cols=100 Identities=11% Similarity=0.052 Sum_probs=64.0
Q ss_pred CCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCC
Q 013654 12 NPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGF 91 (439)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl 91 (439)
+..++.++||+|++..++.. ...|.||++.++.-+ . . .+++..++.++.|+
T Consensus 43 ~~~~~~~vLL~~r~~~~~~~---------~g~w~lPgG~ve~gE--s---~---------------~~aa~REl~EEtGl 93 (194)
T 1nqz_A 43 TREADPRVLLTVRSSELPTH---------KGQIAFPGGSLDAGE--T---P---------------TQAALREAQEEVAL 93 (194)
T ss_dssp ESSSSCBBCEEEEC---------------CCCEECSEEECCTTC--C---H---------------HHHHHHHHHHHHCC
T ss_pred ecCCCeEEEEEEecCCCCCC---------CCeEECCcccCCCCC--C---H---------------HHHHHHHHHHHHCC
Confidence 43333389999987532211 346999999887432 2 1 47899999999999
Q ss_pred eeccCcee-eeeeeccCCCCCCCCeeeEEEEEeEccCC------cccccccccccCHHHH-HH
Q 013654 92 GVRDGGEW-KLWKCVEEPEFGPGLTIHTVYIMGKLLDG------NQILQEGCKWMSTQSC-IN 146 (439)
Q Consensus 92 ~l~~~~~~-~~~~w~~~~~~~~~~~~dT~f~~a~~p~~------~~~e~~~~~W~~~~~a-l~ 146 (439)
.+....+. .+.+..+ .+.+...+|++.++.+ +..|.....|++.+++ ++
T Consensus 94 ~~~~~~~l~~~~~~~~------~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 150 (194)
T 1nqz_A 94 DPAAVTLLGELDDVFT------PVGFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAV 150 (194)
T ss_dssp CGGGCEEEEECCCEEE------TTTEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHS
T ss_pred CccceEEEEEccCccC------CCCeEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccC
Confidence 87643322 2222222 2356778888887622 4468889999999988 54
No 116
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=94.80 E-value=0.015 Score=47.91 Aligned_cols=95 Identities=16% Similarity=0.243 Sum_probs=61.8
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|++.... ...+|.+|++.++. +|. . .+++..++.++.|+.+..
T Consensus 15 ~~~vLl~~r~~~~~----------~~g~w~~PgG~~e~--gE~---~---------------~~aa~RE~~EE~G~~~~~ 64 (129)
T 1mut_A 15 NNEIFITRRAADAH----------MANKLEFPGGKIEM--GET---P---------------EQAVVRELQEEVGITPQH 64 (129)
T ss_dssp TTEEEEEECSSCCS----------SSCCEECCCCCSSS--CSS---T---------------THHHHHHHHTTTCCSSCE
T ss_pred CCEEEEEEeCCCCC----------CCCeEECCccCcCC--CCC---H---------------HHHHHHHHHHHhCCcccc
Confidence 34899999876521 24689999987764 222 1 367899999999998764
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCC--cccccccccccCHHHHH
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCI 145 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~--~~~e~~~~~W~~~~~al 145 (439)
..+. .. ++.. ...++....||.+...++ ...|.....|++++++.
T Consensus 65 ~~~~--~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~ 111 (129)
T 1mut_A 65 FSLF--EK-LEYE--FPDRHITLWFWLVERWEGEPWGKEGQPGEWMSLVGLN 111 (129)
T ss_dssp ECCC--CC-CBCC--CSSCEEECCCEEEEECSSCCCCCSSCCCEEEESSSCC
T ss_pred ceEE--EE-EEEe--cCCceEEEEEEEEEccCCccCCcccceeEEeCHHHcc
Confidence 3222 11 1111 234566777888888766 34567788999876543
No 117
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=94.77 E-value=0.011 Score=56.43 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=66.9
Q ss_pred eehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
.++||-|+.+ .++||+||...| ..|.+|++.++. +|. . .+++..++
T Consensus 104 v~avv~~~~~-~~vLLv~r~~~~-------------g~W~lPgG~ve~--gEs---~---------------~eAA~REl 149 (271)
T 2a6t_A 104 RGAIMLDMSM-QQCVLVKGWKAS-------------SGWGFPKGKIDK--DES---D---------------VDCAIREV 149 (271)
T ss_dssp EEEEEBCSSS-SEEEEEEESSTT-------------CCCBCSEEECCT--TCC---H---------------HHHHHHHH
T ss_pred EEEEEEECCC-CEEEEEEEeCCC-------------CeEECCcccCCC--CcC---H---------------HHHHHHHH
Confidence 4667777653 499999997643 369999999874 332 2 47899999
Q ss_pred HHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEc-cCC------cccccccccccCHHHHHHHHH
Q 013654 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKL-LDG------NQILQEGCKWMSTQSCINCLA 149 (439)
Q Consensus 86 l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~-p~~------~~~e~~~~~W~~~~~al~~~~ 149 (439)
.++.|+.+.. +....+|..+. ... .+ .++|++.. +.. +..|.....|++++++.+...
T Consensus 150 ~EEtGl~~~~--l~~~~~~~~~~--~~~-~~-~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 214 (271)
T 2a6t_A 150 YEETGFDCSS--RINPNEFIDMT--IRG-QN-VRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKK 214 (271)
T ss_dssp HHHHCCCCTT--TCCTTCEEEEE--ETT-EE-EEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC-
T ss_pred HHHhCCCcee--eeeeeeeccCC--cCC-ce-EEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHh
Confidence 9999998876 33444565543 222 22 34455543 321 346888999999998876533
No 118
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=94.69 E-value=0.023 Score=51.17 Aligned_cols=105 Identities=11% Similarity=0.201 Sum_probs=61.9
Q ss_pred ehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHH
Q 013654 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (439)
+.+|-++. +.++||+|++. ...|.||++.++ .+|. . .+++..++.
T Consensus 49 ~~vv~~~~-~~~vLL~~r~~--------------~g~w~lPgG~ve--~gEs---~---------------~eaa~REl~ 93 (197)
T 3fcm_A 49 SAFAVNKE-RNKFLMIHHNI--------------YNSWAWTGGHSD--NEKD---Q---------------LKVAIKELK 93 (197)
T ss_dssp EEEEECTT-SCEEEEEEETT--------------TTEEECEEEECT--TCCB---H---------------HHHHHHHHH
T ss_pred EEEEEECC-CCEEEEEEecC--------------CCCEECCccccC--CCCC---H---------------HHHHHHHHH
Confidence 44555554 34999999762 238999999887 3443 2 478999999
Q ss_pred HHcCCe-ecc--CceeeeeeeccCCCCCCC--------CeeeEEEEEeEccCC-----cccccccccccCHHHHHHHHH
Q 013654 87 EQLGFG-VRD--GGEWKLWKCVEEPEFGPG--------LTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCINCLA 149 (439)
Q Consensus 87 ~~~gl~-l~~--~~~~~~~~w~~~~~~~~~--------~~~dT~f~~a~~p~~-----~~~e~~~~~W~~~~~al~~~~ 149 (439)
++.|+. +.. .....+..+..+. ..+ ..|+..| ++..+.+ +..|.....|++++++.+.+.
T Consensus 94 EEtGl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 169 (197)
T 3fcm_A 94 EETGVKNPTPLLDKAFALDVLTVNG--HIKRGKYVSSHLHLNLTY-LIECSEDETLMLKEDENSGVMWIPFNEISKYCS 169 (197)
T ss_dssp HHHCCSSCEESCSSCSEEEEEEECC--EEETTEEECCEEEEEEEE-EEECCTTSCCCCCC----CEEEEEGGGHHHHCC
T ss_pred HHHCCCcccccCCCceEEEEeeecC--ccccCcccCCceeEEEEE-EEEeCCCcccCCCcccccceEEccHHHHHhhcC
Confidence 999998 432 2222222222222 111 1233444 4455554 347888999999999887653
No 119
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=94.67 E-value=0.047 Score=46.84 Aligned_cols=104 Identities=19% Similarity=0.289 Sum_probs=69.5
Q ss_pred ehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHH
Q 013654 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (439)
+.+|.+. +.++||+|++....+ ..+|.||++.++. +|. . .+++..++.
T Consensus 33 ~~~i~~~--~~~vLL~~r~~~~~~----------~g~w~~PgG~ve~--gE~---~---------------~~aa~RE~~ 80 (158)
T 3hhj_A 33 ACALLDQ--DNRVLLTQRPEGKSL----------AGLWEFPGGKVEQ--GET---P---------------EASLIRELE 80 (158)
T ss_dssp EEEEBCT--TSEEEEEECCCTTSC----------CCCCBCCEEECCT--TCC---H---------------HHHHHHHHH
T ss_pred EEEEEeC--CCEEEEEEeCCCCCC----------CCEEECCceeecC--CCC---H---------------HHHHHHHHH
Confidence 4445543 348999997643211 3589999987763 222 1 477899999
Q ss_pred HHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC--cccccccccccCHHHHH
Q 013654 87 EQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCI 145 (439)
Q Consensus 87 ~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~--~~~e~~~~~W~~~~~al 145 (439)
++.|+.+....+..+.... .. ...+.....+|++....+ +..|.....|++.+++.
T Consensus 81 EEtGl~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~ 138 (158)
T 3hhj_A 81 EELGVHVQADNLFPLTFAS-HG--YETFHLLMPLYFCSHYKGVAQGREGQNLKWIFINDLD 138 (158)
T ss_dssp HHHCCBCCGGGCEEEEEEE-EE--CSSCEEEEEEEEESCCBSCCCCTTSCEEEEEEGGGGG
T ss_pred HHhCcEeecceEEEEEEEe-ec--cCCcEEEEEEEEEEECCCccCCccccceEEEcHHHHh
Confidence 9999998887654332211 11 234577888898888766 44677889999987754
No 120
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=94.32 E-value=0.03 Score=48.27 Aligned_cols=102 Identities=11% Similarity=0.039 Sum_probs=65.6
Q ss_pred ehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHH
Q 013654 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (439)
+++|.+ +.++||+|++. ...|.||++.++. +|. . .+++..++.
T Consensus 10 ~~vi~~---~~~vLL~~r~~--------------~g~w~lPgG~ve~--gEs---~---------------~~aa~REl~ 52 (159)
T 3f6a_A 10 SVFIVC---KDKVLLHLHKK--------------AKKMLPLGGHIEV--NEL---P---------------EEACIREAK 52 (159)
T ss_dssp EEEEEE---TTEEEEEECSS--------------SCCEECEEEECCT--TCC---H---------------HHHHHHHHH
T ss_pred EEEEEE---CCEEEEEEcCC--------------CCeEECCccCccC--CCC---H---------------HHHHHHHHH
Confidence 344554 34999999863 3579999998864 332 2 478999999
Q ss_pred HHcCCeeccCceeee-----------eeeccCC-----CCCCCCeeeEEEEEeEccCC----cccccccccccCHHHHH
Q 013654 87 EQLGFGVRDGGEWKL-----------WKCVEEP-----EFGPGLTIHTVYIMGKLLDG----NQILQEGCKWMSTQSCI 145 (439)
Q Consensus 87 ~~~gl~l~~~~~~~~-----------~~w~~~~-----~~~~~~~~dT~f~~a~~p~~----~~~e~~~~~W~~~~~al 145 (439)
++.|+.+....+... ..|..|. .+.+...+=+.+|++..+.+ +..|.....|++++++.
T Consensus 53 EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~ 131 (159)
T 3f6a_A 53 EEAGLNVTLYNPIDINLKKSCDLSGEKLLINPIHTILGDVSPNHSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLK 131 (159)
T ss_dssp HHHCCCCEECCCCCHHHHHHHHHTTCEEECCCSEEEEECSSSSSCEEEEEEEEECSCSCCCCCTTSCCCEEEECSSSST
T ss_pred HHhCCCceecccccccccccccccccccccCccccccccCCCCceEEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHh
Confidence 999998876544311 1111110 00122334446788888777 35788889999987654
No 121
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=94.22 E-value=0.033 Score=55.28 Aligned_cols=99 Identities=24% Similarity=0.286 Sum_probs=65.6
Q ss_pred CCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeec
Q 013654 15 NDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVR 94 (439)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~ 94 (439)
++.|+||+|++. .+.|.||++.++. +|. . .+++..|+.|+.|+.+.
T Consensus 36 ~~~~vLLv~r~~--------------~g~W~lPgG~ve~--gEs---~---------------~~AA~REl~EEtGl~~~ 81 (364)
T 3fjy_A 36 DSIEVCIVHRPK--------------YDDWSWPKGKLEQ--NET---H---------------RHAAVREIGEETGSPVK 81 (364)
T ss_dssp TTEEEEEEEETT--------------TTEEECCEEECCT--TCC---H---------------HHHHHHHHHHHHSCCEE
T ss_pred CceEEEEEEcCC--------------CCCEECCcCCCCC--CCC---H---------------HHHHHHHHHHHhCCeee
Confidence 355999999832 1679999988874 333 2 47899999999999987
Q ss_pred cCceeeeeeeccCCCCC---------CCCeeeEEEEEeEccCCc----------------ccccccccccCHHHHHHHH
Q 013654 95 DGGEWKLWKCVEEPEFG---------PGLTIHTVYIMGKLLDGN----------------QILQEGCKWMSTQSCINCL 148 (439)
Q Consensus 95 ~~~~~~~~~w~~~~~~~---------~~~~~dT~f~~a~~p~~~----------------~~e~~~~~W~~~~~al~~~ 148 (439)
...+.....+..+.+ + ........||++....++ ..|.....|++++++.+.+
T Consensus 82 ~~~~l~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~ 159 (364)
T 3fjy_A 82 LGPYLCEVEYPLSEE-GKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKIL 159 (364)
T ss_dssp EEEEEEEEC----------------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHC
T ss_pred eccccceEEEeccCC-CcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHh
Confidence 655444333333221 1 112577889998887652 3688899999999998764
No 122
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=94.02 E-value=0.055 Score=48.11 Aligned_cols=104 Identities=10% Similarity=0.022 Sum_probs=68.3
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|+++.++.+... .....|.||++.++. +|. . .+++..++.++.|+....
T Consensus 45 ~~~vLL~~r~~~~~~g~~~----~~~g~w~lPGG~ve~--gEs---~---------------~~aa~REl~EEtGl~~~~ 100 (187)
T 3i9x_A 45 TLHILLIKRSLTNAEGKPN----MEGGKWAVPGGFVDE--NES---A---------------EQAAERELEEETSLTDIP 100 (187)
T ss_dssp EEEEEEEECCSBCTTSSBC----TTTTCEECSEEECCT--TSC---H---------------HHHHHHHHHHHHCCCSCC
T ss_pred CCEEEEEEEccccccccCC----CCCCEEECCceeCCC--CCC---H---------------HHHHHHHHHHHHCCCCcc
Confidence 3589999998765544321 246789999998875 333 2 478999999999997654
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCC------cccccccccccCHHHHHH
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG------NQILQEGCKWMSTQSCIN 146 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~------~~~e~~~~~W~~~~~al~ 146 (439)
.. .+..+-.+. ..+..++-+.+|.+.+..+ +..|.....|++++++.+
T Consensus 101 ~~--~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 154 (187)
T 3i9x_A 101 LI--PFGVFDKPG-RDPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALE 154 (187)
T ss_dssp CE--EEEEECCTT-SSTTSSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTT
T ss_pred eE--EEEEEcCCc-cCCCCCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHccc
Confidence 33 333333322 1223345556666666544 346788899999998763
No 123
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=93.93 E-value=0.092 Score=50.03 Aligned_cols=99 Identities=18% Similarity=0.252 Sum_probs=72.3
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
..++||+|+...| + ...|.||++.++. +|. . .+++..++.++-|+.+..
T Consensus 55 ~~~VLLv~R~~~p---------~--~g~W~lPGG~ve~--gEs---~---------------~~AA~REl~EEtGl~v~~ 103 (273)
T 2fml_A 55 QLKVLLIQRKGHP---------F--RNSWALPGGFVNR--NES---T---------------EDSVLRETKEETGVVISQ 103 (273)
T ss_dssp EEEEEEEEECSSS---------S--TTCEECCEEECCT--TSC---H---------------HHHHHHHHHHHHCCCCCG
T ss_pred CcEEEEEEccCCC---------C--CCcEECCccCCCC--CcC---H---------------HHHHHHHHHHHHCCCCCc
Confidence 4589999997653 1 2579999999875 222 2 478999999999998887
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCC---cccccccccccCHHHHHH
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCIN 146 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~---~~~e~~~~~W~~~~~al~ 146 (439)
..+..+..|..+.. .+..++-+.+|++.++.+ ...|.....|++++++.+
T Consensus 104 ~~l~~l~~~~~~~r-~~~~~~~~~~y~a~~~~~~~~~~~E~~~~~W~~~~e~~~ 156 (273)
T 2fml_A 104 ENIEQLHSFSRPDR-DPRGWVVTVSYLAFIGEEPLIAGDDAKEVHWFNLERHGQ 156 (273)
T ss_dssp GGEEEEEEECCTTS-STTSSEEEEEEEEECCCCCCCCCTTEEEEEEEEEEEETT
T ss_pred CcEEEEEEEcCCCC-CCCceEEEEEEEEEeCCCCCCCCcceeeEEEEEhhHhhh
Confidence 77777777765541 233357788999988766 346788899998876543
No 124
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=93.90 E-value=0.053 Score=46.89 Aligned_cols=100 Identities=17% Similarity=0.079 Sum_probs=60.2
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|.+.... ....+|.||++.++. +| +. .+++..++.++.|+.+..
T Consensus 38 ~~~vLL~~r~~~~~---------~~~g~w~lPgG~ve~--gE---~~---------------~~aa~REl~EEtGl~~~~ 88 (165)
T 3oga_A 38 DGCYLLCKMADNRG---------VFPGQWALSGGGVEP--GE---RI---------------EEALRREIREELGEQLIL 88 (165)
T ss_dssp TTEEEEEEECC---------------CCEECCCEECCT--TC---CH---------------HHHHHHHHHHHHCSSCCE
T ss_pred CCEEEEEEecCCCC---------CCCCeEECCccccCC--CC---CH---------------HHHHHHHHHHHhCCCccc
Confidence 35899998764332 134689999988653 22 22 478999999999999877
Q ss_pred Cceeeee------eeccCCCCCCCCeee--EEEEEeEccCC---cccccccccccCHHHHHH
Q 013654 96 GGEWKLW------KCVEEPEFGPGLTIH--TVYIMGKLLDG---NQILQEGCKWMSTQSCIN 146 (439)
Q Consensus 96 ~~~~~~~------~w~~~~~~~~~~~~d--T~f~~a~~p~~---~~~e~~~~~W~~~~~al~ 146 (439)
..+..+. .+..+. +....+. ..+|.+....+ ...|.....|++++++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 148 (165)
T 3oga_A 89 SDITPWTFRDDIRIKTYAD--GRQEEIYMIYLIFDCVSANRDICINDEFQDYAWVKPEELAL 148 (165)
T ss_dssp EEEEEEEEEEEEEEEEC----CCEEEEEEEEEEEEEEESCCCCCCCTTEEEEEEECGGGGGG
T ss_pred cceeeeeeecceeeEecCC--CCceeEEEEEEEEEeeccCCCccCCchheeeEEccHHHHhh
Confidence 6665543 122222 1111222 34555665555 235778899999988654
No 125
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=93.43 E-value=0.12 Score=50.34 Aligned_cols=100 Identities=17% Similarity=0.074 Sum_probs=64.3
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|++..|. ...|.||++.++.- |. . .+++..|+.++.|+.+..
T Consensus 213 ~~~vLL~~r~~~~~-----------~g~w~lPgG~ve~g--E~---~---------------~~aa~REl~EEtGl~~~~ 261 (341)
T 2qjo_A 213 AGHVLMVRRQAKPG-----------LGLIALPGGFIKQN--ET---L---------------VEGMLRELKEETRLKVPL 261 (341)
T ss_dssp TTEEEEEECCSSSS-----------TTCEECSEEECCTT--SC---H---------------HHHHHHHHHHHHCCSSCH
T ss_pred CCEEEEEEecCCCC-----------CCeEECCCCcCCCC--CC---H---------------HHHHHHHHhhhhCCcccc
Confidence 45999999965431 46799999998752 22 2 478999999999998875
Q ss_pred Ccee----eeeeeccCCCCCCCCeeeEEEEEeEccCCc------ccccccccccCHHHHHHH
Q 013654 96 GGEW----KLWKCVEEPEFGPGLTIHTVYIMGKLLDGN------QILQEGCKWMSTQSCINC 147 (439)
Q Consensus 96 ~~~~----~~~~w~~~~~~~~~~~~dT~f~~a~~p~~~------~~e~~~~~W~~~~~al~~ 147 (439)
..+. ....|-.|. ..+..+.-+.+|++.++.++ ..|.....|++++++.+.
T Consensus 262 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 262 PVLRGSIVDSHVFDAPG-RSLRGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp HHHHHTEEEEEEECCTT-SCTTSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHT
T ss_pred ccccccccceEEEeCCC-CCCCCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhh
Confidence 4321 123333333 12222455778888887653 368889999999998763
No 126
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=93.39 E-value=0.03 Score=48.91 Aligned_cols=105 Identities=13% Similarity=0.288 Sum_probs=66.1
Q ss_pred hhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHH
Q 013654 8 LILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILE 87 (439)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 87 (439)
.+|-|. +.++||+|+.. ...|.+|++.++. +|. . .+++..++.+
T Consensus 13 ~~i~~~--~~~vLl~~r~~--------------~~~w~~p~G~~e~--gE~---~---------------~~aa~RE~~E 56 (164)
T 2kdv_A 13 IVICNR--QGQVMWARRFG--------------QHSWQFPQGGINP--GES---A---------------EQAMYRELFE 56 (164)
T ss_dssp EEEECT--TSEEEEEEETT--------------CCCEECCEEECCT--TCC---H---------------HHHHHHHHHH
T ss_pred EEEEcc--CCEEEEEEEcC--------------CCeEECCeeecCC--CCC---H---------------HHHHHHHHHH
Confidence 455554 34899999863 3679999987764 332 2 4789999999
Q ss_pred HcCCeeccCc-eeeeeeec---cCCCCC----CC--CeeeEEEEEeEccCCc---------ccccccccccCHHHHHHHH
Q 013654 88 QLGFGVRDGG-EWKLWKCV---EEPEFG----PG--LTIHTVYIMGKLLDGN---------QILQEGCKWMSTQSCINCL 148 (439)
Q Consensus 88 ~~gl~l~~~~-~~~~~~w~---~~~~~~----~~--~~~dT~f~~a~~p~~~---------~~e~~~~~W~~~~~al~~~ 148 (439)
+.|+...... +..+.+|+ .|.... .+ ......||++.+..++ ..|.....|+++.++++.+
T Consensus 57 E~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~l 136 (164)
T 2kdv_A 57 EVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQV 136 (164)
T ss_dssp HHCCCGGGEEEEEECSSCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGGS
T ss_pred HHCCCccceEEEEEecceeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhhh
Confidence 9999876432 33333443 222100 11 1224578888876552 2477889999988877653
No 127
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=93.29 E-value=0.04 Score=50.02 Aligned_cols=95 Identities=17% Similarity=0.314 Sum_probs=64.0
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|++. ...|.||++.++. +|. . .+++..++.++.|+.+..
T Consensus 78 ~~~vLLv~r~~--------------~g~w~lPgG~ve~--gEs---~---------------~~aa~REl~EEtGl~v~~ 123 (205)
T 3q1p_A 78 NEKLLFVKEKS--------------DGKWALPGGWADV--GYT---P---------------TEVAAKEVFEETGYEVDH 123 (205)
T ss_dssp TTEEEEEEC-----------------CCEECSEEECCT--TCC---H---------------HHHHHHHHHHHHSEEEEE
T ss_pred CCEEEEEEEcC--------------CCcEECCcCccCC--CCC---H---------------HHHHHHHHHHHHCCcccc
Confidence 45999999751 4589999998875 332 2 478999999999999886
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCC---cccccccccccCHHHH
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSC 144 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~---~~~e~~~~~W~~~~~a 144 (439)
..+.....+.....-+....+-..||++.+..+ .+.|.....|+++.+.
T Consensus 124 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el 175 (205)
T 3q1p_A 124 FKLLAIFDKEKHQPSPSATHVYKIFIGCEIIGGEKKTSIETEEVEFFGENEL 175 (205)
T ss_dssp EEEEEEEEHHHHSCCCCSSCEEEEEEEEEEEEECCCCCTTSCCEEEECTTSC
T ss_pred ceEEEEEeccccCCCCCCceEEEEEEEEEecCCccCCCCcceEEEEEeHHHh
Confidence 555544443322200223455567888888666 3368889999988764
No 128
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=93.11 E-value=0.12 Score=48.33 Aligned_cols=97 Identities=16% Similarity=0.146 Sum_probs=68.5
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|+...|. ...|.||++.++...+|. . .+++..++.++-|+....
T Consensus 36 ~~~vLLv~R~~~~~-----------~g~W~lPGG~ve~~~gEs---~---------------~~AA~REl~EEtGl~~~~ 86 (240)
T 3gz5_A 36 QLKVLLVQRSNHPF-----------LGLWGLPGGFIDETCDES---L---------------EQTVLRKLAEKTAVVPPY 86 (240)
T ss_dssp EEEEEEEECCSSSS-----------TTCEECSEEECCTTTCSB---H---------------HHHHHHHHHHHHSSCCSE
T ss_pred CcEEEEEECcCCCC-----------CCCEECCccccCCCCCcC---H---------------HHHHHHHHHHHHCCCCCc
Confidence 45899999875331 357999999988644544 1 478999999999998743
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCC----cccccccccccCHHHH
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG----NQILQEGCKWMSTQSC 144 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~----~~~e~~~~~W~~~~~a 144 (439)
+..+..+-.+.. .+..++-+.+|.|.++.+ +..|...+.|++++++
T Consensus 87 --~~~l~~~~~~~r-~~~~~~~~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el 136 (240)
T 3gz5_A 87 --IEQLCTVGNNSR-DARGWSVTVCYTALMSYQACQIQIASVSDVKWWPLADV 136 (240)
T ss_dssp --EEEEEEEEESSS-STTSCEEEEEEEEECCHHHHHHHHTTCTTEEEEEHHHH
T ss_pred --eeeEEEeCCCcc-CCCceEEEEEEEEEecccccCCCCCcccceEEecHHHc
Confidence 333333333321 344578888999998877 3468889999999886
No 129
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=93.06 E-value=0.039 Score=50.11 Aligned_cols=93 Identities=17% Similarity=0.305 Sum_probs=62.9
Q ss_pred ceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeeccC
Q 013654 17 SEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDG 96 (439)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~~ 96 (439)
.++||+|++ ...|.||++.++. +| +. .+++..++.++.|+.+...
T Consensus 81 ~~vLLvrr~---------------~g~w~lPgG~ve~--gE---s~---------------~~aa~REl~EEtGl~~~~~ 125 (206)
T 3o8s_A 81 DKILLVQEN---------------DGLWSLPGGWCDV--DQ---SV---------------KDNVVKEVKEEAGLDVEAQ 125 (206)
T ss_dssp TEEEEEECT---------------TSCEECSEEECCT--TS---CH---------------HHHHHHHHHHHHCEEEEEE
T ss_pred CEEEEEEec---------------CCeEECCeeccCC--CC---CH---------------HHHHHHHHHHHHCCcceee
Confidence 599999976 4689999988763 22 22 4789999999999998765
Q ss_pred ceeeeeeeccCCCCCCCCeeeEEEEEeEccCC---cccccccccccCHHHH
Q 013654 97 GEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSC 144 (439)
Q Consensus 97 ~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~---~~~e~~~~~W~~~~~a 144 (439)
.+.....+.....-+....+-..||.+.+..+ .+.|.....|+++++.
T Consensus 126 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el 176 (206)
T 3o8s_A 126 RVVAILDKHKNNPAKSAHRVTKVFILCRLLGGEFQPNSETVASGFFSLDDL 176 (206)
T ss_dssp EEEEEEEHHHHCC-----CEEEEEEEEEEEEECCCCCSSCSEEEEECTTSC
T ss_pred eEEEEEeccccCCCCCCceEEEEEEEEEecCCeecCCCCceEEEEEeHHHh
Confidence 55444443322200223466678888888766 2268888999988764
No 130
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=93.05 E-value=0.065 Score=46.02 Aligned_cols=96 Identities=21% Similarity=0.253 Sum_probs=59.6
Q ss_pred ehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHH
Q 013654 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQIL 86 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (439)
+.+|.+ +.++||+|++. ...|.||++.++. +|. . .+++..++.
T Consensus 5 ~~vi~~---~~~vLL~~r~~--------------~g~W~lPgG~ve~--gEs---~---------------~~aa~REl~ 47 (156)
T 1k2e_A 5 SGVLVE---NGKVLLVKHKR--------------LGVYIYPGGHVEH--NET---P---------------IEAVKREFE 47 (156)
T ss_dssp EEECEE---TTEEEEEECTT--------------TCSEECSEEECCT--TCC---H---------------HHHHHHHHH
T ss_pred EEEEEE---CCEEEEEEEcC--------------CCcEECCeeecCC--CCC---H---------------HHHHHHHHH
Confidence 344554 44999999753 3579999998875 222 2 477999999
Q ss_pred HHcCCeeccCceee-eeee---------------ccCCCCCCCCeee-EEEEEeEccCCcccccccccccCHHHHH
Q 013654 87 EQLGFGVRDGGEWK-LWKC---------------VEEPEFGPGLTIH-TVYIMGKLLDGNQILQEGCKWMSTQSCI 145 (439)
Q Consensus 87 ~~~gl~l~~~~~~~-~~~w---------------~~~~~~~~~~~~d-T~f~~a~~p~~~~~e~~~~~W~~~~~al 145 (439)
++.|+.+....+.. +..| ++-+ . ...+. +.+|.+..+. .|.....|++++++.
T Consensus 48 EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~f~~~~~~---~e~~~~~W~~~~el~ 117 (156)
T 1k2e_A 48 EETGIVVEPIGFTYGIIDENAVERPMPLVILEEVVKYP--E-ETHIHFDLIYLVKRVG---GDLKNGEWIDVREID 117 (156)
T ss_dssp HHHSEEEEECCCCCCCBSSSEEECCCCSEEEEEEEECS--S-CEEEEEEEEEEEEEEE---ECCCSCEEEEGGGGG
T ss_pred HHHCCcceeccceeeecccccccccccceeeeeeecCC--C-CceEEEEEEEEEEecC---CcEeeeEEeCHHHHh
Confidence 99999988765422 1111 1111 1 11211 2346666543 357789999988764
No 131
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=92.62 E-value=0.15 Score=49.87 Aligned_cols=100 Identities=15% Similarity=0.127 Sum_probs=67.2
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|+...| ....|.||++.++. +|. . .+++..|+.++.|+.+..
T Consensus 218 ~~~vLL~~r~~~~-----------~~g~w~lPgG~ve~--gEt---~---------------~~aa~REl~EEtGl~v~~ 266 (352)
T 2qjt_B 218 NDHILMVQRKAHP-----------GKDLWALPGGFLEC--DET---I---------------AQAIIRELFEETNINLTH 266 (352)
T ss_dssp TTEEEEEEESSSS-----------STTCEECSEEECCT--TSC---H---------------HHHHHHHHHHHHCCSCCH
T ss_pred CCEEEEEEEcCCC-----------CCCeEECCCCcCCC--CCC---H---------------HHHHHHHHHHhhCCCccc
Confidence 4599999997643 14689999998875 322 2 478999999999999875
Q ss_pred Cce----eeeeeeccCCCCCCCCeeeEEEEEeEccCCc-------ccccccccccCH-HHHHHH
Q 013654 96 GGE----WKLWKCVEEPEFGPGLTIHTVYIMGKLLDGN-------QILQEGCKWMST-QSCINC 147 (439)
Q Consensus 96 ~~~----~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~~-------~~e~~~~~W~~~-~~al~~ 147 (439)
..+ .....|..|. .....+.-+..|++.++.+. ..|.....|+++ +++.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 267 EQLAIAKRCEKVFDYPD-RSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp HHHHHHEEEEEEECCTT-SCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHT
T ss_pred chhcceeeeeEEecCCC-CCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhh
Confidence 432 1223343333 12223456677777776553 468889999999 887663
No 132
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=92.12 E-value=0.077 Score=49.05 Aligned_cols=95 Identities=14% Similarity=0.152 Sum_probs=64.4
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|+...|. ...|.||++.++. +|. . .+++..++.++-|+....
T Consensus 27 ~~~vLLv~r~~~~~-----------~g~w~lPGG~ve~--gEs---~---------------~~Aa~REl~EEtGl~~~~ 75 (226)
T 2fb1_A 27 EISLLLLKRNFEPA-----------MGEWSLMGGFVQK--DES---V---------------DDAAKRVLAELTGLENVY 75 (226)
T ss_dssp EEEEEEEECSSSSS-----------TTCEECEEEECCT--TSC---H---------------HHHHHHHHHHHHCCCSCE
T ss_pred CCEEEEEECcCCCC-----------CCCEECCeeccCC--CCC---H---------------HHHHHHHHHHHHCCCCCc
Confidence 45899999976431 3569999999984 333 2 478999999999998753
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCCc----ccccccccccCHHHH
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDGN----QILQEGCKWMSTQSC 144 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~~----~~e~~~~~W~~~~~a 144 (439)
+..+..+-.+. -.+..++-+.+|.|.++.+. ..|...+.|++++++
T Consensus 76 --~~~l~~~~~~~-r~~~~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el 125 (226)
T 2fb1_A 76 --MEQVGAFGAID-RDPGERVVSIAYYALININEYDRELVQKHNAYWVNINEL 125 (226)
T ss_dssp --EEEEEEECCTT-SSSSSCEEEEEEEEECCTTSSCHHHHHHTTEEEEETTSC
T ss_pred --eEEEEEeCCCC-cCCCceEEEEEEEEEecCcccccCCccccceEEEEHHHh
Confidence 22222222222 12334667778889888763 367888999988764
No 133
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=91.93 E-value=0.48 Score=41.29 Aligned_cols=107 Identities=12% Similarity=0.095 Sum_probs=66.8
Q ss_pred ehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCC-CccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 7 ALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDL-PAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
+.+|.|+. .++||.|.++.... -..+|+| |++.++. +| +. .+++..++
T Consensus 41 ~v~i~~~~--~~vLl~~R~~~~~~---------~~g~w~l~pGG~ve~--gE---~~---------------~~aa~REl 89 (180)
T 2fkb_A 41 YIVVHDGM--GKILVQRRTETKDF---------LPGMLDATAGGVVQA--DE---QL---------------LESARREA 89 (180)
T ss_dssp EEEEECSS--SCEEEEEECSSCSS---------STTCEESSBCCBCBT--TC---CH---------------HHHHHHHH
T ss_pred EEEEECCC--CEEEEEECCCCCcc---------CCCcEEeecCCCCCC--CC---CH---------------HHHHHHHH
Confidence 34555543 37888776543211 1357999 8888763 22 22 47899999
Q ss_pred HHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC---cccccccccccCHHHHHHHHH
Q 013654 86 LEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINCLA 149 (439)
Q Consensus 86 l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~---~~~e~~~~~W~~~~~al~~~~ 149 (439)
.++.|+.... +..+..+.... . .......+|++..... +..|.....|++++++.+.+.
T Consensus 90 ~EEtGl~~~~--~~~l~~~~~~~--~-~~~~~~~~f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 151 (180)
T 2fkb_A 90 EEELGIAGVP--FAEHGQFYFED--K-NCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCD 151 (180)
T ss_dssp HHHHCCBSCC--CEEEEEEEEEE--T-TEEEEEEEEEEECCCCCCCCTTTEEEEEEECHHHHHTTGG
T ss_pred HHHHCCCccc--eEEEEEEEecC--C-CceEEEEEEEEecCCCcCCChhHhheEEEecHHHHHHHHH
Confidence 9999997643 22333332222 1 3456677787774322 456788899999999887654
No 134
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=91.83 E-value=0.38 Score=40.89 Aligned_cols=106 Identities=16% Similarity=0.323 Sum_probs=62.5
Q ss_pred ehhhcCC-CCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 7 ALILKNP-LNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 7 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
+++|.+. ..+.++||+|++... .-..+|.||++.++. +|. ...+++..++
T Consensus 23 ~~vi~~~~~~~~~vLl~~R~~~~----------~~~g~w~~PgG~~e~--gE~-----------------~~~~a~~REl 73 (155)
T 1x51_A 23 TCVLEQPGALGAQILLVQRPNSG----------LLAGLWEFPSVTWEP--SEQ-----------------LQRKALLQEL 73 (155)
T ss_dssp EEEEEEECSSSEEEEEEECCCCS----------TTCSCEECCEEECCS--SHH-----------------HHHHHHHHHH
T ss_pred EEEEEecCCCCCEEEEEECCCCC----------CCCceecCCccccCC--CCC-----------------HHHHHHHHHH
Confidence 3455443 224589999865321 123589999987653 222 0125677889
Q ss_pred HHHcC-CeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCCc--ccccccccccCHHHHHH
Q 013654 86 LEQLG-FGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDGN--QILQEGCKWMSTQSCIN 146 (439)
Q Consensus 86 l~~~g-l~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~~--~~e~~~~~W~~~~~al~ 146 (439)
.++.| +..... ..+.. +. ..| ..++....+|.+.+..+. ..|.....|++++++.+
T Consensus 74 ~EE~g~l~~~~~--~~l~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 132 (155)
T 1x51_A 74 QRWAGPLPATHL--RHLGE-VV-HTF-SHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHT 132 (155)
T ss_dssp HHHSCCCCSTTC--EECCC-BC-CBC-SSCEEEEEEEEEECSSCCCCCCCCTTEEEEEHHHHHH
T ss_pred HHHhCCcceeee--eecce-EE-Eec-CCccEEEEEEEEEEcCCCCCCCCCCccEEccHHHhhh
Confidence 99999 654332 22211 11 111 234667778998887652 34667889999988764
No 135
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=91.66 E-value=0.1 Score=49.77 Aligned_cols=90 Identities=14% Similarity=0.120 Sum_probs=62.4
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||+|++..| ...|.||++.++. +|. . .+++..|+.++.|+.+..
T Consensus 150 ~~~vLL~rr~~~~------------~g~w~lPgG~vE~--GEt---~---------------eeAa~REv~EEtGl~v~~ 197 (269)
T 1vk6_A 150 DDSILLAQHTRHR------------NGVHTVLAGFVEV--GET---L---------------EQAVAREVMEESGIKVKN 197 (269)
T ss_dssp TTEEEEEEETTTC------------SSCCBCEEEECCT--TCC---H---------------HHHHHHHHHHHHCCEEEE
T ss_pred CCEEEEEEecCCC------------CCcEECCcCcCCC--CCC---H---------------HHHHHHHHHHHhCceeee
Confidence 4599999998654 1469999998874 322 2 478999999999999874
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCC----cccccccccccCHHHH
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG----NQILQEGCKWMSTQSC 144 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~----~~~e~~~~~W~~~~~a 144 (439)
-.+..-..|.- + ..-..+|++.+..+ +..|.....|++.+++
T Consensus 198 ~~~~~~~~~~~------~-~~~~~~f~a~~~~~~~~~~~~E~~~~~W~~~~el 243 (269)
T 1vk6_A 198 LRYVTSQPWPF------P-QSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDL 243 (269)
T ss_dssp EEEEEEEEEET------T-EEEEEEEEEEEEECCCCCCTTTEEEEEEEETTSC
T ss_pred EEEEEEEecCC------C-CEEEEEEEEEECCCCcCCCCcceEEEEEEEHHHh
Confidence 43322222321 2 22456788887666 4578899999998775
No 136
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=89.93 E-value=0.16 Score=43.14 Aligned_cols=79 Identities=14% Similarity=0.237 Sum_probs=58.5
Q ss_pred CCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEEEEe
Q 013654 44 WDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMG 123 (439)
Q Consensus 44 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a 123 (439)
|.||++.++. +|. . .+++..++.++.|+.+....+....++..+. ..++.+.+|.+
T Consensus 38 w~lPgG~ve~--gE~---~---------------~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 93 (155)
T 2b06_A 38 YAFPGGHVEN--DEA---F---------------AESVIREIYEETGLTIQNPQLVGIKNWPLDT----GGRYIVICYKA 93 (155)
T ss_dssp EECCCCBCCT--TSC---H---------------HHHHHHHHHHHHSEEEESCEEEEEEEEECTT----SCEEEEEEEEE
T ss_pred EeccceecCC--CCC---H---------------HHHHHHHHHHHhCccccCCcEEEEEeeccCC----CceEEEEEEEE
Confidence 8999998874 222 1 4779999999999999877766665665433 46778888888
Q ss_pred EccCC--cccccccccccCHHHHHH
Q 013654 124 KLLDG--NQILQEGCKWMSTQSCIN 146 (439)
Q Consensus 124 ~~p~~--~~~e~~~~~W~~~~~al~ 146 (439)
..+.+ ...|.....|++++++.+
T Consensus 94 ~~~~~~~~~~e~~~~~W~~~~el~~ 118 (155)
T 2b06_A 94 TEFSGTLQSSEEGEVSWVQKDQIPN 118 (155)
T ss_dssp CEEEECCCCBTTBEEEEEEGGGGGG
T ss_pred EecCCCCCCCcceeeEEeeHHHhhh
Confidence 87665 336778899999887654
No 137
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=87.06 E-value=0.25 Score=47.48 Aligned_cols=96 Identities=15% Similarity=0.146 Sum_probs=60.9
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
..++||+|.... ..|.||++.++. +|. . .+++..++.++.|+.+..
T Consensus 138 ~l~vLl~~r~~~--------------g~W~lPGG~Ve~--GEs---~---------------~eAA~REl~EETGl~~~~ 183 (292)
T 1q33_A 138 ILQFVAIKRKDC--------------GEWAIPGGMVDP--GEK---I---------------SATLKREFGEEALNSLQK 183 (292)
T ss_dssp CEEEEEEECTTT--------------CSEECCCEECCT--TCC---H---------------HHHHHHHHHHHHSCGGGS
T ss_pred ceEEEEEEecCC--------------CcEeCCCcccCC--CCC---H---------------HHHHHHHHHHHhCCcccc
Confidence 347999987541 589999998875 332 1 378999999999998522
Q ss_pred ------------Ccee------eeeeeccCCCCCCCCeeeEEEEEeEccCC---------cccccccccccCHHHHH
Q 013654 96 ------------GGEW------KLWKCVEEPEFGPGLTIHTVYIMGKLLDG---------NQILQEGCKWMSTQSCI 145 (439)
Q Consensus 96 ------------~~~~------~~~~w~~~~~~~~~~~~dT~f~~a~~p~~---------~~~e~~~~~W~~~~~al 145 (439)
..+. -|..+...+......++-|..|.+..+.+ .++|...+.|++++++.
T Consensus 184 ~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dpr~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~ 260 (292)
T 1q33_A 184 TSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKL 260 (292)
T ss_dssp CSSHHHHHHHHHHHHTTTSEEEEEEEECCCTTCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTC
T ss_pred ccccchhhHHHHHHHhhcccceeecccccCCCCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCc
Confidence 2121 12333333311122367788887765433 34688899999988753
No 138
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=85.64 E-value=1.6 Score=37.74 Aligned_cols=81 Identities=17% Similarity=0.159 Sum_probs=50.7
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.+.||+|+. ...|.||++.++. +|. . .+++..++.++.|+.+..
T Consensus 26 ~~~vLL~~r~---------------~g~w~lPgG~ve~--gEs---~---------------~~aa~REl~EEtGl~~~~ 70 (163)
T 3f13_A 26 PDGVLVTASR---------------GGRYNLPGGKANR--GEL---R---------------SQALIREIREETGLRINS 70 (163)
T ss_dssp TTEEEEEECC------------------BBCSEEECCT--TCC---H---------------HHHHHHHHHHHHCCCCCE
T ss_pred CCEEEEEEEC---------------CCeEECCceeCCC--CCC---H---------------HHHHHHHHHHHHCcccce
Confidence 3489999874 2479999988763 332 2 478999999999998754
Q ss_pred CceeeeeeeccCCCCCCCCeeeEEEEEeEccCC--cccccccccccC
Q 013654 96 GGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMS 140 (439)
Q Consensus 96 ~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~--~~~e~~~~~W~~ 140 (439)
. ..+..+..+. ....+|++.+... ...|.....|++
T Consensus 71 ~--~~l~~~~~~~-------~~~~~f~~~~~~~~~~~~E~~~~~W~~ 108 (163)
T 3f13_A 71 M--LYLFDHITPF-------NAHKVYLCIAQGQPKPQNEIERIALVS 108 (163)
T ss_dssp E--EEEEEEECSS-------EEEEEEEEEC-CCCCCCTTCCEEEEES
T ss_pred e--EEEEEEecCC-------eEEEEEEEEECCcCccCCCceEEEEEC
Confidence 3 3344433221 4455666676322 223778889987
No 139
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=85.47 E-value=0.51 Score=43.26 Aligned_cols=112 Identities=10% Similarity=0.059 Sum_probs=66.9
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCC-CccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeec
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDL-PAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVR 94 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~ 94 (439)
+.++|++|.+.+|. +. ++ ...|.+ |++.++.-+. . .|+ + --.+++..++.++.|+.+.
T Consensus 78 ~grvLl~~R~~~~~--e~----~~-~g~w~~gPGGhVE~GEs-~-~p~---E---------tleeAa~REl~EEtGl~v~ 136 (211)
T 3e57_A 78 GDRVLITKRTTKQS--EK----RL-HNLYSLGIGGHVREGDG-A-TPR---E---------AFLKGLEREVNEEVDVSLR 136 (211)
T ss_dssp TTEEEEEEC-------------------CBSSEECCCBGGGC-S-SHH---H---------HHHHHHHHHHHHHEEEEEE
T ss_pred CCEEEEEEECCCCC--cc----cc-cCCcccccceEEeCCCC-C-Cch---h---------hHHHHHHHHHHHHhCCeee
Confidence 45999998776552 11 11 246888 9999887654 1 110 0 0147899999999999887
Q ss_pred cCceeeeeeeccCCCCCCCCeeeEEEEEeEccCC--cccccccccccCHHHHHHHHHhc
Q 013654 95 DGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDG--NQILQEGCKWMSTQSCINCLAEV 151 (439)
Q Consensus 95 ~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~--~~~e~~~~~W~~~~~al~~~~~~ 151 (439)
...+.-+..|...+ ..+.+=..+|.+...++ .++|.....|+++++..+.....
T Consensus 137 ~~~~ig~~~~~~~~---~~~~~l~~~f~~~~~~g~~~~~E~~~~~W~~~~eL~~~~~~l 192 (211)
T 3e57_A 137 ELEFLGLINSSTTE---VSRVHLGALFLGRGKFFSVKEKDLFEWELIKLEELEKFSGVM 192 (211)
T ss_dssp EEEEEEEEECCSSH---HHHTEEEEEEEEEEEEEEESCTTTCEEEEEEHHHHHHHGGGC
T ss_pred ccEEEEEEeccCCC---CCeEEEEEEEEEEeCCceeCCCCeEEEEEEEHHHHHHhHhhc
Confidence 66655555553322 12222234577777666 44667789999999988765444
No 140
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=84.90 E-value=0.94 Score=44.90 Aligned_cols=99 Identities=16% Similarity=0.241 Sum_probs=65.8
Q ss_pred eehhhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHH
Q 013654 6 VALILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQI 85 (439)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (439)
.+++|.|. +.++||+|.+.... -..+|.||++..+. | +. .++...++
T Consensus 243 ~~~vi~~~--~g~vLL~rR~~~g~----------~~GlWefPGG~ve~--------g-t~------------~~al~REl 289 (369)
T 3fsp_A 243 AVAVLADD--EGRVLIRKRDSTGL----------LANLWEFPSCETDG--------A-DG------------KEKLEQMV 289 (369)
T ss_dssp EEEEEECS--SSEEEEEECCSSST----------TTTCEECCEEECSS--------S-CT------------HHHHHHHH
T ss_pred EEEEEEeC--CCEEEEEECCCCCC----------cCCcccCCCcccCC--------C-Cc------------HHHHHHHH
Confidence 45666653 34899988754211 14689999987642 2 11 25567788
Q ss_pred HHHcCCeeccCce-eeeeeeccCCCCCCCCeeeEEEEEeEccCCcccccccccccCHHHH
Q 013654 86 LEQLGFGVRDGGE-WKLWKCVEEPEFGPGLTIHTVYIMGKLLDGNQILQEGCKWMSTQSC 144 (439)
Q Consensus 86 l~~~gl~l~~~~~-~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~~~~e~~~~~W~~~~~a 144 (439)
.++.|+.+..... ..+.|..+ ...++..||.+.+..+ ..|.....|+++++.
T Consensus 290 ~EE~Gl~v~~~~~l~~~~h~~~------h~~~~~~~~~~~~~~~-~~e~~~~~Wv~~~el 342 (369)
T 3fsp_A 290 GEQYGLQVELTEPIVSFEHAFS------HLVWQLTVFPGRLVHG-GPVEEPYRLAPEDEL 342 (369)
T ss_dssp TTSSSCCEEECCCCCEEEEECS------SEEEEEEEEEEEECCS-SCCCTTEEEEEGGGG
T ss_pred HHHhCCceeeecccccEEEEcc------eEEEEEEEEEEEEcCC-CCCccccEEeeHHHh
Confidence 8889998876543 33444433 3478899999998765 457788899988764
No 141
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=80.07 E-value=1.4 Score=40.00 Aligned_cols=91 Identities=12% Similarity=0.064 Sum_probs=59.6
Q ss_pred CceeEEeecCCCCCCCcccccccccccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeecc
Q 013654 16 DSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRD 95 (439)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~ 95 (439)
+.++||.|+ | ...|.+|++.++. +|. +. .+++..++.++.|+....
T Consensus 55 ~~~vLl~~r----------~-----~g~w~~PGG~ve~--gE~--t~---------------~~aa~REl~EEtGl~~~~ 100 (212)
T 1u20_A 55 RRVLLMMMR----------F-----DGRLGFPGGFVDT--RDI--SL---------------EEGLKRELEEELGPALAT 100 (212)
T ss_dssp CEEEEEEEE----------T-----TSCEECSEEEECT--TTS--CH---------------HHHHHHHHHHHHCGGGGG
T ss_pred CCEEEEEEe----------C-----CCeEECCCcccCC--CCC--CH---------------HHHHHHHHHHHHCCCccc
Confidence 347888876 1 5689999988874 320 11 477999999999999876
Q ss_pred Ccee---eeeeeccCCCCCCCCeeeEEEEEeEccCC--------------cccccccccccCHHHH
Q 013654 96 GGEW---KLWKCVEEPEFGPGLTIHTVYIMGKLLDG--------------NQILQEGCKWMSTQSC 144 (439)
Q Consensus 96 ~~~~---~~~~w~~~~~~~~~~~~dT~f~~a~~p~~--------------~~~e~~~~~W~~~~~a 144 (439)
..+. ++..... . .+ .++-..||++.+..+ ++.|.....|++..++
T Consensus 101 ~~l~~~~~~~~~~~-~--~~-~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el 162 (212)
T 1u20_A 101 VEVTEDDYRSSQVR-E--HP-QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTL 162 (212)
T ss_dssp CCCCGGGEEEEEEE-C--TT-SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBC
T ss_pred cceeeeeEEEeccc-c--CC-CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHh
Confidence 5431 2222211 1 12 577888999988754 2245566889887654
No 142
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=78.90 E-value=1.5 Score=40.05 Aligned_cols=67 Identities=10% Similarity=0.048 Sum_probs=45.4
Q ss_pred ccCCCCCccccccccCccCCCcceecccccccccccchhhHHHHHHHHcCCeeccCceeeeeeeccCCCCCCCCeeeEEE
Q 013654 41 SDLWDLPAIKLNHIQGEKSEPTISIQGSEKINLGKFDIESALNQILEQLGFGVRDGGEWKLWKCVEEPEFGPGLTIHTVY 120 (439)
Q Consensus 41 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f 120 (439)
...|.||++.++. +|. +. .+++..++.++.|+......+..+..+.+.+ +.....-+.|
T Consensus 74 ~g~w~lPGG~ve~--gE~--t~---------------~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~--~~~~~~~~~~ 132 (217)
T 2xsq_A 74 DGRLGFPGGFVDT--QDR--SL---------------EDGLNRELREELGEAAAAFRVERTDYRSSHV--GSGPRVVAHF 132 (217)
T ss_dssp TSCEECSEEECCT--TCS--SH---------------HHHHHHHHHHHHCGGGGGCCCCGGGEEEEEE--CSSSSEEEEE
T ss_pred CCeEECCceecCC--CCC--CH---------------HHHHHHHHHHHHCCCCccceeEEEEEEeecC--CCCCeEEEEE
Confidence 3579999998885 330 11 4789999999999998865444444444434 3233667788
Q ss_pred EEeEccCC
Q 013654 121 IMGKLLDG 128 (439)
Q Consensus 121 ~~a~~p~~ 128 (439)
|++.++.+
T Consensus 133 f~~~l~~~ 140 (217)
T 2xsq_A 133 YAKRLTLE 140 (217)
T ss_dssp EEEECCHH
T ss_pred EEEEeccc
Confidence 89887654
No 143
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=72.25 E-value=17 Score=33.62 Aligned_cols=71 Identities=8% Similarity=-0.031 Sum_probs=45.0
Q ss_pred hhhHHHHHHHHcCCeecc---Cceeeeee--eccCCCCCCC---CeeeEEEEEeEccCC---cccccccccccCHHHHHH
Q 013654 78 IESALNQILEQLGFGVRD---GGEWKLWK--CVEEPEFGPG---LTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCIN 146 (439)
Q Consensus 78 ~~~~l~~~l~~~gl~l~~---~~~~~~~~--w~~~~~~~~~---~~~dT~f~~a~~p~~---~~~e~~~~~W~~~~~al~ 146 (439)
.+++..++.++.|+.... +.+.++.. |..+. ... ..++..| ++..+.. +..|....+|++++++.+
T Consensus 124 ~eAA~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~--~~~~~~~e~~~vf-~~~~~~~~~~~~~Ev~~~~wv~~eel~~ 200 (246)
T 2pny_A 124 RRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKS--DRIWGEHEICYLL-LVRKNVTLNPDPSETKSILYLSQEELWE 200 (246)
T ss_dssp HHHHHHHHHHHHCCCTTTCCGGGSEEEEEEEEEEES--SSSBEEEEEEEEE-EEECCCCCCCCTTTEEEEEEECHHHHHH
T ss_pred HHHHHHHHHHHHCCCccccCccccEEEEEEEEEecC--CCceeeeEEEEEE-EEEECCCCCCChHHeeEEEEEeHHHHHH
Confidence 478999999999998642 22333332 33322 111 1244444 4554322 457889999999999999
Q ss_pred HHHhc
Q 013654 147 CLAEV 151 (439)
Q Consensus 147 ~~~~~ 151 (439)
++.+.
T Consensus 201 ~l~~~ 205 (246)
T 2pny_A 201 LLERE 205 (246)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 98873
No 144
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=69.66 E-value=17 Score=33.32 Aligned_cols=117 Identities=11% Similarity=0.063 Sum_probs=65.6
Q ss_pred hhcCCCCCceeEEeecCCCCCCCcccccccccccCCCCCc-cccccccCccC-CCcceecccccccccccchhhHHHHHH
Q 013654 9 ILKNPLNDSEFLLVKQTPPPKFNDEEYDSYVDSDLWDLPA-IKLNHIQGEKS-EPTISIQGSEKINLGKFDIESALNQIL 86 (439)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l 86 (439)
+|-|+. .++||.|.+.. |. ....+|++|. +-+..=++|.. ++.+. -.+++..++.
T Consensus 65 ~v~~~~--g~lLLq~R~~~-k~--------~~pg~W~~p~gG~v~~Ge~E~~~E~~~~------------~~~Aa~REl~ 121 (235)
T 2dho_A 65 FLFNTE--NKLLLQQRSDA-KI--------TFPGCFTNTCCSHPLSNPAELEESDALG------------VRRAAQRRLK 121 (235)
T ss_dssp EEECTT--CCEEEEEECTT-CS--------SSTTCEESSEEECCBSSHHHHCCGGGHH------------HHHHHHHHHH
T ss_pred EEEcCC--CEEEEEEecCc-CC--------CCCCcEEeccCceecCCCcccccccchh------------HHHHHHHHHH
Confidence 345543 38888765432 21 1235799994 55543322210 11000 0478999999
Q ss_pred HHcCCeecc---Cceeeeee--eccCCCCCCC---CeeeEEEEEeEccCC---cccccccccccCHHHHHHHHHhc
Q 013654 87 EQLGFGVRD---GGEWKLWK--CVEEPEFGPG---LTIHTVYIMGKLLDG---NQILQEGCKWMSTQSCINCLAEV 151 (439)
Q Consensus 87 ~~~gl~l~~---~~~~~~~~--w~~~~~~~~~---~~~dT~f~~a~~p~~---~~~e~~~~~W~~~~~al~~~~~~ 151 (439)
++.|+.... +.+.++.+ |..+. ... ..++..| ++..... +..|....+|++++++.+++...
T Consensus 122 EElGi~~~~v~~~~l~~l~~~~y~~~~--~~~~~~~e~~~vf-~~~~~~~~~~~~~Ev~~~~wv~~~el~~~l~~~ 194 (235)
T 2dho_A 122 AELGIPLEEVPPEEINYLTRIHYKAQS--DGIWGEHEIDYIL-LVRMNVTLNPDPNEIKSYCYVSKEELKELLKKA 194 (235)
T ss_dssp HHHCCCGGGSCGGGSEEEEEEEEEEEC--SSSBEEEEEEEEE-EEECCCCCCCCTTTEEEEEEECHHHHHHHHHHH
T ss_pred HHHCCCccccChhhcEEEEEEEEeccC--CCccceeEEEEEE-EEEECCCCcCChHHEEEEEEEcHHHHHHHHhhc
Confidence 999998652 22333332 33322 111 1244444 4555322 45788999999999999998874
No 145
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=25.15 E-value=63 Score=30.78 Aligned_cols=104 Identities=10% Similarity=-0.019 Sum_probs=57.6
Q ss_pred hhhHHHHHHHHcCCeecc-Cceeee--eeec--cCCCCCCCCeeeEEEEEeEccCC-----cccccccccccCHHHHHHH
Q 013654 78 IESALNQILEQLGFGVRD-GGEWKL--WKCV--EEPEFGPGLTIHTVYIMGKLLDG-----NQILQEGCKWMSTQSCINC 147 (439)
Q Consensus 78 ~~~~l~~~l~~~gl~l~~-~~~~~~--~~w~--~~~~~~~~~~~dT~f~~a~~p~~-----~~~e~~~~~W~~~~~al~~ 147 (439)
.++++.++.++.|+.... ..+.+. -+|. .+. |-. +---..|.+.+|.+ +..|-...+|++.++++++
T Consensus 166 ~eaA~REl~EElGI~~~~~~~l~~~g~i~y~~~~~~--G~~-~E~~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~El~~~ 242 (300)
T 3dup_A 166 RQNLIKECAEEADLPEALARQAIPVGAITYCMESPA--GIK-PDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEA 242 (300)
T ss_dssp HHHHHHHHHHHHCCCHHHHTTCEEEEEEEEEEEETT--EEE-EEEEEEEEEECCTTCCCCCTTSSEEEEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHhCCChhhhhhccccceEEEEEecCC--CeE-EEEEEEEEEEecCCCcCCCCchHhheEEEECHHHHHHH
Confidence 477899999999997643 122211 1222 222 200 00112356777755 5579999999999999999
Q ss_pred HHhcCCCCCcCCchhhhhhccccccccccCCCC-CCCccccCC
Q 013654 148 LAEVKPSTDRVGPLVVIGLLNDLVQWRKWKVPP-TLSYQEYPP 189 (439)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ev~~ 189 (439)
+.+ +..-..-..++++-++ .+..+..+. ++.|.++..
T Consensus 243 l~~-pg~F~p~~~lV~ldfl----~RhG~i~~~~~~~y~~i~~ 280 (300)
T 3dup_A 243 VRT-TEAFKFNVNLTVIDFA----IRHGLIDPDNEPDYQEILA 280 (300)
T ss_dssp HHH-CCCBCTTHHHHHHHHH----HHTTSSCTTTSTTHHHHHH
T ss_pred Hhc-CCCcCccHHHHHHHHH----HHhCCcCCccCCCHHHHHH
Confidence 988 2111222233344332 222333333 666766643
No 146
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=23.18 E-value=1.3e+02 Score=28.67 Aligned_cols=55 Identities=20% Similarity=0.260 Sum_probs=38.3
Q ss_pred hhHHHHHHHHc-CCeeccCceeeeeeeccCCCCCCCCeeeEEEEEeEccCCcccccccccccCHHH
Q 013654 79 ESALNQILEQL-GFGVRDGGEWKLWKCVEEPEFGPGLTIHTVYIMGKLLDGNQILQEGCKWMSTQS 143 (439)
Q Consensus 79 ~~~l~~~l~~~-gl~l~~~~~~~~~~w~~~~~~~~~~~~dT~f~~a~~p~~~~~e~~~~~W~~~~~ 143 (439)
..++.+++++. |+......|.-. | .-+ .+..-+.||.+++..|. +....|.++.+
T Consensus 217 ~~a~RE~~EEttGl~v~~~~L~~v--~-~~~----~~~~~~i~f~~~~~~g~---~~e~~~f~~~e 272 (321)
T 3rh7_A 217 ARTLAAYLEQLTGLNVTIGFLYSV--Y-EDK----SDGRQNIVYHALASDGA---PRQGRFLRPAE 272 (321)
T ss_dssp HHHHHHHHHHHHSSCEEEEEEEEE--E-ECT----TTCCEEEEEEEEECSSC---CSSSEEECHHH
T ss_pred HHHHHHHHHHhcCCEEeeceEEEE--E-EcC----CCceEEEEEEEEeCCCC---eeeeEEECHHH
Confidence 47999999998 999997665433 2 323 12344679999998764 46677777655
Done!