Query 013658
Match_columns 438
No_of_seqs 201 out of 382
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 14:41:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013658.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013658hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i07_A Epidermal growth factor 32.3 32 0.0011 24.5 2.9 23 317-339 32-54 (60)
2 1jlp_A PSI-conotoxin PIIIF; mu 30.0 17 0.00058 22.4 0.8 8 271-278 14-21 (26)
3 2x3w_D Syndapin I, protein kin 29.7 58 0.002 22.9 4.0 39 296-338 19-57 (60)
4 2lx7_A GAS-7, growth arrest-sp 27.7 43 0.0015 24.7 2.9 23 315-337 34-56 (60)
5 3eg3_A Proto-oncogene tyrosine 27.1 51 0.0017 23.4 3.3 22 316-338 37-58 (63)
6 1csk_A C-SRC SH3 domain; phosp 26.7 47 0.0016 24.4 3.1 23 316-338 43-65 (71)
7 1gcq_C VAV proto-oncogene; SH3 26.6 60 0.0021 23.7 3.7 21 316-337 42-64 (70)
8 2vkn_A Protein SSU81; membrane 26.1 66 0.0023 23.6 3.8 39 296-340 23-61 (70)
9 2jxb_A T-cell surface glycopro 25.1 62 0.0021 25.0 3.7 21 317-337 62-82 (86)
10 2dl5_A KIAA0769 protein; SH3 d 24.9 66 0.0023 24.2 3.7 25 317-341 46-70 (78)
11 2k2m_A EPS8-like protein 1; al 24.6 56 0.0019 24.0 3.1 23 318-340 40-62 (68)
12 1uj0_A Signal transducing adap 23.5 75 0.0026 22.7 3.6 21 316-337 36-56 (62)
13 2v1q_A SLA1, cytoskeleton asse 23.1 77 0.0026 22.2 3.6 38 296-337 18-56 (60)
14 1wxb_A Epidermal growth factor 23.0 69 0.0024 23.4 3.4 24 317-340 38-61 (68)
15 1u5s_A Cytoplasmic protein NCK 22.9 58 0.002 23.9 3.0 41 297-340 23-63 (71)
16 2eqi_A Phospholipase C, gamma 22.3 55 0.0019 23.9 2.7 26 316-341 38-63 (69)
17 1b07_A Protein (proto-oncogene 21.9 1.2E+02 0.004 22.1 4.5 37 297-338 20-56 (65)
18 1wxt_A Hypothetical protein FL 21.6 76 0.0026 23.1 3.4 24 318-341 39-62 (68)
19 2lj0_A Sorbin and SH3 domain-c 21.6 82 0.0028 23.3 3.5 36 297-337 23-59 (65)
20 1gl5_A Tyrosine-protein kinase 21.5 81 0.0028 22.8 3.5 24 316-339 33-56 (67)
21 2iim_A Proto-oncogene tyrosine 21.5 80 0.0027 22.4 3.4 21 318-338 38-59 (62)
22 2jw4_A Cytoplasmic protein NCK 21.3 73 0.0025 23.6 3.3 23 317-339 38-60 (72)
23 2ege_A Uncharacterized protein 21.3 81 0.0028 23.6 3.5 30 310-340 40-69 (75)
24 1nm7_A Peroxisomal membrane pr 21.3 83 0.0028 23.6 3.6 21 317-337 45-65 (69)
25 4hwm_A Uncharacterized protein 21.1 40 0.0014 28.8 1.8 21 58-78 35-56 (130)
26 2b86_A Cytoplasmic protein NCK 21.0 57 0.0019 24.2 2.5 22 317-338 35-56 (67)
27 2jt4_A Cytoskeleton assembly c 20.9 87 0.003 22.8 3.6 41 297-341 23-64 (71)
28 1wx6_A Cytoplasmic protein NCK 20.0 1E+02 0.0035 23.8 4.0 25 316-340 50-74 (91)
No 1
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=32.33 E-value=32 Score=24.51 Aligned_cols=23 Identities=17% Similarity=0.465 Sum_probs=16.6
Q ss_pred CCCeeEEeCCCeeeeeechhhhh
Q 013658 317 LGNWWMGFGENLLVGYWPAELFT 339 (438)
Q Consensus 317 tgnWWL~~g~~~~IGYWP~~LF~ 339 (438)
..+||..-..+--.||.|++...
T Consensus 32 ~~~Ww~~~~~~g~~G~~P~~yv~ 54 (60)
T 1i07_A 32 RRQWWKVRNASGDSGFVPNNILD 54 (60)
T ss_dssp GCCEEEEECTTSCEEEEEGGGEE
T ss_pred CCCeEEEEECCCCEEEEEHHHeE
Confidence 78899875323568999997654
No 2
>1jlp_A PSI-conotoxin PIIIF; multiple disulfide bonds, amidated C-terminus; HET: HYP; NMR {Synthetic} SCOP: j.30.1.4
Probab=29.96 E-value=17 Score=22.42 Aligned_cols=8 Identities=75% Similarity=1.834 Sum_probs=7.2
Q ss_pred cceecccC
Q 013658 271 TGCYNLLC 278 (438)
Q Consensus 271 tGCyNl~C 278 (438)
.||||.+|
T Consensus 14 pgcynalc 21 (26)
T 1jlp_A 14 PGCYNALC 21 (26)
T ss_dssp TTTTTSST
T ss_pred Cchhhhhh
Confidence 59999998
No 3
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=29.67 E-value=58 Score=22.93 Aligned_cols=39 Identities=21% Similarity=0.350 Sum_probs=21.7
Q ss_pred cccccCCceeEEEEeeecCCCCCCeeEEeCCCeeeeeechhhh
Q 013658 296 PISTYAGNQFDITILIWKDPKLGNWWMGFGENLLVGYWPAELF 338 (438)
Q Consensus 296 pvS~~~G~q~~i~i~I~kD~~tgnWWL~~g~~~~IGYWP~~LF 338 (438)
.+|...|... .|.+.....+||..-..+.-.||.|++..
T Consensus 19 eLs~~~Gd~i----~v~~~~~~~~W~~g~~~~g~~G~~P~~yv 57 (60)
T 2x3w_D 19 ELSFKAGDEL----TKLGEEDEQGWCRGRLDSGQLGLYPANYV 57 (60)
T ss_dssp BCCBCTTCEE----EECSCCCSSSEEEEECSSCCEEEEEGGGE
T ss_pred cccCCCCCEE----EEEEccCCCCceEEEeCCCCEEEecHHHE
Confidence 3445555532 33333233478876543357899998753
No 4
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=27.72 E-value=43 Score=24.67 Aligned_cols=23 Identities=39% Similarity=0.819 Sum_probs=15.7
Q ss_pred CCCCCeeEEeCCCeeeeeechhh
Q 013658 315 PKLGNWWMGFGENLLVGYWPAEL 337 (438)
Q Consensus 315 ~~tgnWWL~~g~~~~IGYWP~~L 337 (438)
....+||.--..+--.||+|++-
T Consensus 34 ~~~~~Ww~g~~~~G~~G~fP~ny 56 (60)
T 2lx7_A 34 VPDGGWWEGEKEDGLRGWFPASY 56 (60)
T ss_dssp CCTTSCEEEECTTSCEEEECGGG
T ss_pred ecCCCeEEEEeCCCCEEEEcHHH
Confidence 34678998653223579999964
No 5
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=27.13 E-value=51 Score=23.40 Aligned_cols=22 Identities=23% Similarity=0.456 Sum_probs=15.1
Q ss_pred CCCCeeEEeCCCeeeeeechhhh
Q 013658 316 KLGNWWMGFGENLLVGYWPAELF 338 (438)
Q Consensus 316 ~tgnWWL~~g~~~~IGYWP~~LF 338 (438)
..+.||..-.++ -.||+|++..
T Consensus 37 ~~~~W~~~~~~g-~~G~~P~~yv 58 (63)
T 3eg3_A 37 HNGEWCEAQTKN-GQGWVPSAYI 58 (63)
T ss_dssp TTSSEEEEEETT-EEEEEEGGGE
T ss_pred CCCCeEEEEECC-CeEEEehHHe
Confidence 457788765433 4699998754
No 6
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=26.71 E-value=47 Score=24.45 Aligned_cols=23 Identities=26% Similarity=0.313 Sum_probs=16.4
Q ss_pred CCCCeeEEeCCCeeeeeechhhh
Q 013658 316 KLGNWWMGFGENLLVGYWPAELF 338 (438)
Q Consensus 316 ~tgnWWL~~g~~~~IGYWP~~LF 338 (438)
...+||.-...+--.||+|++..
T Consensus 43 ~~~~Ww~g~~~~g~~G~~P~~yv 65 (71)
T 1csk_A 43 KDPNWYKAKNKVGREGIIPANYV 65 (71)
T ss_dssp SSTTEEEEECTTSCEEEEETTSE
T ss_pred CCCCCEEEEeCCCCEEEEehHHe
Confidence 46789987622346899998754
No 7
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=26.57 E-value=60 Score=23.70 Aligned_cols=21 Identities=33% Similarity=0.779 Sum_probs=15.5
Q ss_pred CCCCeeEE--eCCCeeeeeechhh
Q 013658 316 KLGNWWMG--FGENLLVGYWPAEL 337 (438)
Q Consensus 316 ~tgnWWL~--~g~~~~IGYWP~~L 337 (438)
...+||.- ..+ --+|++|+..
T Consensus 42 ~~~~Ww~g~~~~~-g~~G~fP~~y 64 (70)
T 1gcq_C 42 AEHNWWEGRNTAT-NEVGWFPCNR 64 (70)
T ss_dssp TTCSEEEEEETTT-TEEEEEEGGG
T ss_pred CCCCCeEEEeCCC-CCEeEeehHH
Confidence 46899987 333 4589999865
No 8
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=26.12 E-value=66 Score=23.59 Aligned_cols=39 Identities=21% Similarity=0.318 Sum_probs=23.6
Q ss_pred cccccCCceeEEEEeeecCCCCCCeeEEeCCCeeeeeechhhhhh
Q 013658 296 PISTYAGNQFDITILIWKDPKLGNWWMGFGENLLVGYWPAELFTH 340 (438)
Q Consensus 296 pvS~~~G~q~~i~i~I~kD~~tgnWWL~~g~~~~IGYWP~~LF~~ 340 (438)
.+|...|....+ .+ ...+||.....+--.||+|++...-
T Consensus 23 eLsf~~Gd~i~v----~~--~~~~Ww~g~~~~g~~G~~P~~yv~~ 61 (70)
T 2vkn_A 23 EISFEQNEILQV----SD--IEGRWWKARRANGETGIIPSNYVQL 61 (70)
T ss_dssp BCCBCTTCEEEE----EC--TTSSEEEEECTTSCEEEEEGGGEEE
T ss_pred cccCCCCCEEEE----EE--cCCCeEEEEECCCCEEEEehHHEEE
Confidence 345555654332 23 2688998742234689999976543
No 9
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=25.09 E-value=62 Score=24.98 Aligned_cols=21 Identities=24% Similarity=0.537 Sum_probs=15.1
Q ss_pred CCCeeEEeCCCeeeeeechhh
Q 013658 317 LGNWWMGFGENLLVGYWPAEL 337 (438)
Q Consensus 317 tgnWWL~~g~~~~IGYWP~~L 337 (438)
+++||..-..+--+||+|++.
T Consensus 62 ~~~Ww~g~~~~g~~G~~P~~y 82 (86)
T 2jxb_A 62 SKTWWRVRNAANRTGYVPSNY 82 (86)
T ss_dssp CSSEEEEECTTSCEEEEEGGG
T ss_pred CCCeEEEEECCCCEEEeehHH
Confidence 578998763234689999864
No 10
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.87 E-value=66 Score=24.23 Aligned_cols=25 Identities=20% Similarity=0.384 Sum_probs=17.3
Q ss_pred CCCeeEEeCCCeeeeeechhhhhhh
Q 013658 317 LGNWWMGFGENLLVGYWPAELFTHL 341 (438)
Q Consensus 317 tgnWWL~~g~~~~IGYWP~~LF~~l 341 (438)
..+||.-...+--.||+|+....-+
T Consensus 46 ~~~Ww~g~~~~g~~G~~P~~yv~~~ 70 (78)
T 2dl5_A 46 MEDWVKARNKVGQVGYVPEKYLQFP 70 (78)
T ss_dssp SSSEEEEECTTCCEEEEETTTSCCS
T ss_pred CCCcEEEEeCCCCEEEEEhHHEEEC
Confidence 4789986543246899999765543
No 11
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=24.56 E-value=56 Score=23.96 Aligned_cols=23 Identities=26% Similarity=0.523 Sum_probs=16.3
Q ss_pred CCeeEEeCCCeeeeeechhhhhh
Q 013658 318 GNWWMGFGENLLVGYWPAELFTH 340 (438)
Q Consensus 318 gnWWL~~g~~~~IGYWP~~LF~~ 340 (438)
++||.....+--.||.|+.....
T Consensus 40 ~~Ww~~~~~~g~~G~~P~~yv~~ 62 (68)
T 2k2m_A 40 RKWWKVRDPAGQEGYVPYNILTP 62 (68)
T ss_dssp SSEEEEECTTSCCEEEEGGGEEE
T ss_pred CCeEEEEeCCCCEEEEEhhhEEE
Confidence 78998743234689999976543
No 12
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=23.53 E-value=75 Score=22.67 Aligned_cols=21 Identities=29% Similarity=0.778 Sum_probs=15.3
Q ss_pred CCCCeeEEeCCCeeeeeechhh
Q 013658 316 KLGNWWMGFGENLLVGYWPAEL 337 (438)
Q Consensus 316 ~tgnWWL~~g~~~~IGYWP~~L 337 (438)
...+||.-...+ -.||+|+..
T Consensus 36 ~~~~Ww~g~~~g-~~G~~P~~y 56 (62)
T 1uj0_A 36 SDANWWQGENHR-GTGLFPSNF 56 (62)
T ss_dssp CSSSEEEEEETT-EEEEEEGGG
T ss_pred CCCCEEEEEECC-CEEEechhH
Confidence 457899865544 489999865
No 13
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=23.09 E-value=77 Score=22.20 Aligned_cols=38 Identities=26% Similarity=0.504 Sum_probs=22.4
Q ss_pred cccccCCceeEEEEeeecCCCCCCeeEEeC-CCeeeeeechhh
Q 013658 296 PISTYAGNQFDITILIWKDPKLGNWWMGFG-ENLLVGYWPAEL 337 (438)
Q Consensus 296 pvS~~~G~q~~i~i~I~kD~~tgnWWL~~g-~~~~IGYWP~~L 337 (438)
.+|...|.... |.++....+||.-.. .+--.||.|++.
T Consensus 18 eLs~~~Gd~i~----v~~~~~~~~Ww~g~~~~~g~~G~~P~~y 56 (60)
T 2v1q_A 18 ELTIKSGDKVY----ILDDKKSKDWWMCQLVDSGKSGLVPAQF 56 (60)
T ss_dssp BCCBCTTCEEE----EEESSSCSSEEEEEETTTCCEEEEEGGG
T ss_pred CccCCCCCEEE----EEeCCCCCCCEEEEECCCCCEEEEEHHH
Confidence 34555555433 333334678998653 234689999865
No 14
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.96 E-value=69 Score=23.38 Aligned_cols=24 Identities=21% Similarity=0.493 Sum_probs=16.7
Q ss_pred CCCeeEEeCCCeeeeeechhhhhh
Q 013658 317 LGNWWMGFGENLLVGYWPAELFTH 340 (438)
Q Consensus 317 tgnWWL~~g~~~~IGYWP~~LF~~ 340 (438)
..+||.--..+--.||.|+.....
T Consensus 38 ~~~Ww~~~~~~g~~G~~P~~yv~~ 61 (68)
T 1wxb_A 38 GRQWWKLRSRSGQAGYVPCNILGE 61 (68)
T ss_dssp SSSEEEEECTTSCEEEEETTTCCB
T ss_pred CCCEEEEEECCCCEEEEEHHHeEE
Confidence 388998753235689999976543
No 15
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=22.87 E-value=58 Score=23.86 Aligned_cols=41 Identities=20% Similarity=0.336 Sum_probs=23.8
Q ss_pred ccccCCceeEEEEeeecCCCCCCeeEEeCCCeeeeeechhhhhh
Q 013658 297 ISTYAGNQFDITILIWKDPKLGNWWMGFGENLLVGYWPAELFTH 340 (438)
Q Consensus 297 vS~~~G~q~~i~i~I~kD~~tgnWWL~~g~~~~IGYWP~~LF~~ 340 (438)
+|...|....+ +-++....+||.-...+--.||+|++....
T Consensus 23 Ls~~~Gd~i~v---~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~ 63 (71)
T 1u5s_A 23 LNFEKGETMEV---IEKPENDPEWWKCKNARGQVGLVPKNYVVV 63 (71)
T ss_dssp CCCCSSCCEEE---EECCCTTTCEEEEEETTTEEEEEETTSEEE
T ss_pred ccCCCCCEEEE---EECCCCCCCCEEEEeCCCCEEEEeHHHEEE
Confidence 44445554322 223335788998742234689999976543
No 16
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=22.31 E-value=55 Score=23.91 Aligned_cols=26 Identities=23% Similarity=0.680 Sum_probs=18.2
Q ss_pred CCCCeeEEeCCCeeeeeechhhhhhh
Q 013658 316 KLGNWWMGFGENLLVGYWPAELFTHL 341 (438)
Q Consensus 316 ~tgnWWL~~g~~~~IGYWP~~LF~~l 341 (438)
...+||.-...+...||+|+.....+
T Consensus 38 ~~~~Ww~g~~~~~~~G~~P~~yv~~~ 63 (69)
T 2eqi_A 38 EPGGWWKGDYGTRIQQYFPSNYVEDI 63 (69)
T ss_dssp CSSSCEEEEETTEEEEEECGGGEEEC
T ss_pred CCCCeEEEEECCCCEEEEchHHcEEC
Confidence 45689986544566799999875443
No 17
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=21.91 E-value=1.2e+02 Score=22.07 Aligned_cols=37 Identities=16% Similarity=0.302 Sum_probs=22.3
Q ss_pred ccccCCceeEEEEeeecCCCCCCeeEEeCCCeeeeeechhhh
Q 013658 297 ISTYAGNQFDITILIWKDPKLGNWWMGFGENLLVGYWPAELF 338 (438)
Q Consensus 297 vS~~~G~q~~i~i~I~kD~~tgnWWL~~g~~~~IGYWP~~LF 338 (438)
+|...|....+ .+ ....+||.....+--+||.|++..
T Consensus 20 Lsf~~Gd~i~v----~~-~~~~~Ww~g~~~~g~~G~~P~~yv 56 (65)
T 1b07_A 20 LPFKKGDILRI----RD-KPEEQWWNAEDSEGKRGMIPVPYV 56 (65)
T ss_dssp CCBCTTCEEEE----EE-CSSSSEEEEECTTSCEEEEEGGGE
T ss_pred cCCcCCCEEEE----EE-ecCCCeEEEEECCCCEEEEChHHE
Confidence 45555554332 22 235789987632356899999764
No 18
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=21.59 E-value=76 Score=23.13 Aligned_cols=24 Identities=29% Similarity=0.691 Sum_probs=17.1
Q ss_pred CCeeEEeCCCeeeeeechhhhhhh
Q 013658 318 GNWWMGFGENLLVGYWPAELFTHL 341 (438)
Q Consensus 318 gnWWL~~g~~~~IGYWP~~LF~~l 341 (438)
.+||.-...+--+||.|+.....+
T Consensus 39 ~~Ww~~~~~~g~~G~~P~~yv~~~ 62 (68)
T 1wxt_A 39 KRWWLVKNEAGRSGYIPSNILEPL 62 (68)
T ss_dssp SSEEEEECTTSCEEEEEGGGEECC
T ss_pred CCEEEEEECCCCEEEEEhHHcEEC
Confidence 789987632457899999765443
No 19
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=21.57 E-value=82 Score=23.34 Aligned_cols=36 Identities=17% Similarity=0.433 Sum_probs=21.0
Q ss_pred ccccCCceeEEEEeeecCCCCCCeeEEe-CCCeeeeeechhh
Q 013658 297 ISTYAGNQFDITILIWKDPKLGNWWMGF-GENLLVGYWPAEL 337 (438)
Q Consensus 297 vS~~~G~q~~i~i~I~kD~~tgnWWL~~-g~~~~IGYWP~~L 337 (438)
+|...|....+ . +....+||... ..+.-.||+|++-
T Consensus 23 Ls~~~Gd~i~v----~-~~~~~gWw~g~~~~~g~~G~~P~ny 59 (65)
T 2lj0_A 23 LELRDGDIVDV----M-EKCDDGWFVGTSRRTKQFGTFPGNY 59 (65)
T ss_dssp CCBCTTCEEEE----E-EECTTSEEEEEETTTCCEEEEETTS
T ss_pred cCCCCCCEEEE----e-EeCCCCEEEEEECCCCCEEEEehhH
Confidence 45555654432 2 22456899853 3234689999864
No 20
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=21.53 E-value=81 Score=22.84 Aligned_cols=24 Identities=25% Similarity=0.472 Sum_probs=16.6
Q ss_pred CCCCeeEEeCCCeeeeeechhhhh
Q 013658 316 KLGNWWMGFGENLLVGYWPAELFT 339 (438)
Q Consensus 316 ~tgnWWL~~g~~~~IGYWP~~LF~ 339 (438)
...+||.-...+--.||+|++...
T Consensus 33 ~~~~Ww~g~~~~g~~G~~P~~yv~ 56 (67)
T 1gl5_A 33 NDLHWWRARDKYGSEGYIPSNYVT 56 (67)
T ss_dssp SSSSEEEEECSSSCEEEEETTSEE
T ss_pred cCCCcEEEEECCCCEEEEEhHhEE
Confidence 457899876223468999987643
No 21
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=21.48 E-value=80 Score=22.45 Aligned_cols=21 Identities=24% Similarity=0.691 Sum_probs=14.8
Q ss_pred CCeeEEeC-CCeeeeeechhhh
Q 013658 318 GNWWMGFG-ENLLVGYWPAELF 338 (438)
Q Consensus 318 gnWWL~~g-~~~~IGYWP~~LF 338 (438)
++||.-.. .+--.||+|++..
T Consensus 38 ~~Ww~g~~~~~g~~G~~P~~yv 59 (62)
T 2iim_A 38 GEWWKAQSLTTGQEGFIPFNFV 59 (62)
T ss_dssp SSEEEEEETTTCCEEEEEGGGE
T ss_pred CCEEEEEECCCCCEEEEEHHHE
Confidence 58998762 1346899998753
No 22
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=21.32 E-value=73 Score=23.58 Aligned_cols=23 Identities=17% Similarity=0.435 Sum_probs=16.1
Q ss_pred CCCeeEEeCCCeeeeeechhhhh
Q 013658 317 LGNWWMGFGENLLVGYWPAELFT 339 (438)
Q Consensus 317 tgnWWL~~g~~~~IGYWP~~LF~ 339 (438)
+.+||.--..+--.||+|+....
T Consensus 38 ~~~Ww~g~~~~g~~G~~P~~yv~ 60 (72)
T 2jw4_A 38 SKSWWRVRNSMNKTGFVPSNYVE 60 (72)
T ss_dssp SSSSEEEECTTSCEEEECTTSCE
T ss_pred CCCEEEEEECCCCEEEEEhhHEE
Confidence 46899875323468999997654
No 23
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.32 E-value=81 Score=23.57 Aligned_cols=30 Identities=20% Similarity=0.277 Sum_probs=20.0
Q ss_pred eeecCCCCCCeeEEeCCCeeeeeechhhhhh
Q 013658 310 LIWKDPKLGNWWMGFGENLLVGYWPAELFTH 340 (438)
Q Consensus 310 ~I~kD~~tgnWWL~~g~~~~IGYWP~~LF~~ 340 (438)
.|.++.....||..--+ --.||+|+.....
T Consensus 40 ~v~~~~~~~gWw~g~~~-g~~G~fP~~yv~~ 69 (75)
T 2ege_A 40 MVYGPMDDQGFYYGELG-GHRGLVPAHLLDH 69 (75)
T ss_dssp EEESCCCTTCEEEEESS-SCEEEEETTTEEE
T ss_pred EEeEccCCCCEEEEEEC-CcEEEEChHHeEE
Confidence 34443357889986553 4689999976543
No 24
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=21.29 E-value=83 Score=23.60 Aligned_cols=21 Identities=29% Similarity=0.597 Sum_probs=14.6
Q ss_pred CCCeeEEeCCCeeeeeechhh
Q 013658 317 LGNWWMGFGENLLVGYWPAEL 337 (438)
Q Consensus 317 tgnWWL~~g~~~~IGYWP~~L 337 (438)
..+||..-..+--+||.|+..
T Consensus 45 ~~gWW~g~~~~G~~G~~Psny 65 (69)
T 1nm7_A 45 DSDWWKVRTKNGNIGYIPYNY 65 (69)
T ss_dssp SSSCEEEEETTTEEEEECGGG
T ss_pred CCCeeEEEeCCCCEEEecHHH
Confidence 458998654224589999864
No 25
>4hwm_A Uncharacterized protein YEDD; YEDD-like protein, PF13987 family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 1.38A {Klebsiella pneumoniae subsp}
Probab=21.11 E-value=40 Score=28.79 Aligned_cols=21 Identities=24% Similarity=0.621 Sum_probs=17.0
Q ss_pred hCCCCceE-EeCCCCCeeeeee
Q 013658 58 INKPPVMT-IESPDGDIIDCVH 78 (438)
Q Consensus 58 lnkp~vkt-I~s~dGdiiDCVd 78 (438)
+...|+.| |.|.+||..||--
T Consensus 35 vSpeAiASLivt~eGdTLDCRQ 56 (130)
T 4hwm_A 35 MSPDAIASLIVTKEGDTFDCRQ 56 (130)
T ss_dssp SSTTCEEEEEECTTSEEEEEEE
T ss_pred cChhheeeEEEcCCCCccchhh
Confidence 55667776 8899999999964
No 26
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=20.99 E-value=57 Score=24.24 Aligned_cols=22 Identities=23% Similarity=0.515 Sum_probs=15.5
Q ss_pred CCCeeEEeCCCeeeeeechhhh
Q 013658 317 LGNWWMGFGENLLVGYWPAELF 338 (438)
Q Consensus 317 tgnWWL~~g~~~~IGYWP~~LF 338 (438)
+++||..-..+--+||.|++..
T Consensus 35 ~~~Ww~~~~~~g~~G~~Psnyv 56 (67)
T 2b86_A 35 SKTWWRVRNAANRTGYVPSNYV 56 (67)
T ss_dssp SSSSCEEECTTSCEEECCCCSE
T ss_pred CCCeEEEEeCCCCEEEeChHHE
Confidence 3689987632346899999764
No 27
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=20.94 E-value=87 Score=22.81 Aligned_cols=41 Identities=24% Similarity=0.507 Sum_probs=24.1
Q ss_pred ccccCCceeEEEEeeecCCCCCCeeEEeC-CCeeeeeechhhhhhh
Q 013658 297 ISTYAGNQFDITILIWKDPKLGNWWMGFG-ENLLVGYWPAELFTHL 341 (438)
Q Consensus 297 vS~~~G~q~~i~i~I~kD~~tgnWWL~~g-~~~~IGYWP~~LF~~l 341 (438)
+|...|... .|..+....+||.-.. .+--.||+|++....+
T Consensus 23 Ls~~~Gd~i----~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~ 64 (71)
T 2jt4_A 23 LTIKSGDKV----YILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPV 64 (71)
T ss_dssp CCBCTTCEE----EEEESSSCSSEEEEEETTTCCEEEEEGGGEEET
T ss_pred ccCCCCCEE----EEEECCCCCCCEEEEECCCCCeEEechHHeEEC
Confidence 455555543 3333333788998654 2346899999775443
No 28
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=20.04 E-value=1e+02 Score=23.76 Aligned_cols=25 Identities=20% Similarity=0.349 Sum_probs=17.8
Q ss_pred CCCCeeEEeCCCeeeeeechhhhhh
Q 013658 316 KLGNWWMGFGENLLVGYWPAELFTH 340 (438)
Q Consensus 316 ~tgnWWL~~g~~~~IGYWP~~LF~~ 340 (438)
...+||.--..+--.||+|+.....
T Consensus 50 ~~~~Ww~g~~~~g~~G~~P~~yv~~ 74 (91)
T 1wx6_A 50 NDPEWWKCKNARGQVGLVPKNYVVV 74 (91)
T ss_dssp SCTTEEEEECTTCCEEEEEGGGEEE
T ss_pred CCCCcEEEEeCCCCEEEEchHHEEE
Confidence 5788998752235689999977544
Done!