BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013663
(438 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H0U4|TNPO1_ARATH Transportin-1 OS=Arabidopsis thaliana GN=TRN1 PE=1 SV=1
Length = 891
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/434 (78%), Positives = 389/434 (89%)
Query: 2 ATSVAWQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAE 61
AT+V WQP++ G EIC LLEQQISPSS DKSQIW+QLQ +SQFPDFNNYL FIL RAE
Sbjct: 3 ATAVVWQPRDDGLAEICSLLEQQISPSSVVDKSQIWKQLQHFSQFPDFNNYLVFILVRAE 62
Query: 62 GKSVEIRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVV 121
GKSVE+RQAAGLLLKNNLR AY SM+ NQ+YIKSELLPCLGAADR+IR+TVGTI+SV+V
Sbjct: 63 GKSVEVRQAAGLLLKNNLRGAYPSMTQENQKYIKSELLPCLGAADRNIRTTVGTIISVIV 122
Query: 122 QLGGIAGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIF 181
+ G++GW ELL ALVTCLDSND+NHM+GAMDALSKICEDIP VLD++VPGLAE PINIF
Sbjct: 123 NIEGVSGWHELLPALVTCLDSNDLNHMDGAMDALSKICEDIPHVLDTEVPGLAERPINIF 182
Query: 182 LPRLLQFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLV 241
LPRLLQFFQSPH SLRKL+LGSVNQ+I++MP+AL+ S+D+YLQGLF+L+NDP EVRKLV
Sbjct: 183 LPRLLQFFQSPHASLRKLALGSVNQYIIIMPAALYNSLDKYLQGLFVLANDPVPEVRKLV 242
Query: 242 CAAFNLLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKE 301
CAAF L EV PS +EPHLRN+ EYMLQVN+D D++V+LEACEFW +Y +AQLP ENLKE
Sbjct: 243 CAAFVHLTEVLPSSIEPHLRNVMEYMLQVNRDPDEEVSLEACEFWSAYCDAQLPPENLKE 302
Query: 302 FLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDDDI 361
FLPRL+PVLL NM YADDDESL++AEEDES PDRDQDLKPRFH+SRLHGSE+ +DDDDD
Sbjct: 303 FLPRLIPVLLENMAYADDDESLLDAEEDESQPDRDQDLKPRFHTSRLHGSEDFDDDDDDS 362
Query: 362 VNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAE 421
NVWNLRKCSAAA+DVLSNVFGDEILP LMP+IQ LSASGDEAWK REAAVLALGAIAE
Sbjct: 363 FNVWNLRKCSAAAIDVLSNVFGDEILPALMPLIQKNLSASGDEAWKQREAAVLALGAIAE 422
Query: 422 GCIKGLYPHLSEVI 435
GC+ GLYPHLSE++
Sbjct: 423 GCMNGLYPHLSEIV 436
>sp|B8ARW2|TNPO1_ORYSI Transportin-1 OS=Oryza sativa subsp. indica GN=OsI_18044 PE=2 SV=1
Length = 890
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/436 (70%), Positives = 371/436 (85%), Gaps = 3/436 (0%)
Query: 1 MATSVAWQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARA 60
MA + WQPQE+G EIC LL+ ISP+S D+++IWQQLQ YSQFPDFNNYL F+LAR
Sbjct: 1 MAAAALWQPQEEGLREICTLLDAHISPNS--DQARIWQQLQHYSQFPDFNNYLVFLLARG 58
Query: 61 EGKSVEIRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVV 120
EGKS E RQAAGLLLKNNLR + SM P++QQY+KSELLPC+GA ++ IRSTVGT++SV+
Sbjct: 59 EGKSFEARQAAGLLLKNNLRATFSSMPPASQQYVKSELLPCIGATNKAIRSTVGTVISVL 118
Query: 121 VQLGGIAGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINI 180
Q+ +AGW+EL QAL CLDSND++HMEGAMDA+ KICED+P+ LD DVPGL E PIN+
Sbjct: 119 FQIVRVAGWIELFQALHQCLDSNDLDHMEGAMDAIYKICEDVPEELDVDVPGLPERPINV 178
Query: 181 FLPRLLQFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKL 240
F+PRLLQFFQS H LRKL+LG +NQ+I++MP+AL++SMDQYLQGLF L+ DPSA+VRKL
Sbjct: 179 FMPRLLQFFQSTHAILRKLALGCINQYIVVMPAALYMSMDQYLQGLFNLAKDPSADVRKL 238
Query: 241 VCAAFNLLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLK 300
VC+A+ LIEVRPS LEPHL+N+ E MLQ NKD+DD+VALEACEFW +Y + +P E L+
Sbjct: 239 VCSAWVQLIEVRPSILEPHLKNVTELMLQANKDSDDEVALEACEFWSAYCDVSMPPEGLR 298
Query: 301 EFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDDD 360
EFLPRL+P LLSNM Y+DDDESL +AEE+ES PDRDQDLKPRFH+SRLHGSE EDDDDD
Sbjct: 299 EFLPRLIPTLLSNMSYSDDDESLADAEEEESFPDRDQDLKPRFHASRLHGSETGEDDDDD 358
Query: 361 I-VNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAI 419
VNVWNLRKCSAA LDVLSNVFGD+ILPTLMP+IQ L+ + D+AWK+REAAVL++GAI
Sbjct: 359 DAVNVWNLRKCSAAGLDVLSNVFGDDILPTLMPLIQQNLARTDDDAWKEREAAVLSIGAI 418
Query: 420 AEGCIKGLYPHLSEVI 435
AEGCI GLYPHL +++
Sbjct: 419 AEGCITGLYPHLPQIV 434
>sp|B9FDR3|TNPO1_ORYSJ Transportin-1 OS=Oryza sativa subsp. japonica GN=TRN1 PE=3 SV=2
Length = 891
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/435 (70%), Positives = 370/435 (85%), Gaps = 3/435 (0%)
Query: 2 ATSVAWQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAE 61
A + WQPQE+G EIC LL+ ISP+S D+++IWQQLQ YSQFPDFNNYL F+LAR E
Sbjct: 3 AAAALWQPQEEGLREICTLLDAHISPNS--DQARIWQQLQHYSQFPDFNNYLVFLLARGE 60
Query: 62 GKSVEIRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVV 121
GKS E RQAAGLLLKNNLR + SM P++QQY+KSELLPC+GA ++ IRSTVGT++SV+
Sbjct: 61 GKSFEARQAAGLLLKNNLRATFSSMPPASQQYVKSELLPCIGATNKAIRSTVGTVISVLF 120
Query: 122 QLGGIAGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIF 181
Q+ +AGW+EL QAL CLDSND++HMEGAMDA+ KICED+P+ LD DVPGL E PIN+F
Sbjct: 121 QIVRVAGWIELFQALHQCLDSNDLDHMEGAMDAIYKICEDVPEELDVDVPGLPERPINVF 180
Query: 182 LPRLLQFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLV 241
+PRLLQFFQS H LRKL+LG +NQ+I++MP+AL++SMDQYLQGLF L+ DPSA+VRKLV
Sbjct: 181 MPRLLQFFQSTHAILRKLALGCINQYIVVMPAALYMSMDQYLQGLFNLAKDPSADVRKLV 240
Query: 242 CAAFNLLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKE 301
C+A+ LIEVRPS LEPHL+N+ E MLQ NKD+DD+VALEACEFW +Y + +P E L+E
Sbjct: 241 CSAWVQLIEVRPSILEPHLKNVTELMLQANKDSDDEVALEACEFWSAYCDVSMPPEGLRE 300
Query: 302 FLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDDDI 361
FLPRL+P LLSNM Y+DDDESL +AEEDES PDRDQDLKPRFH+SRLHGSE EDDDDD
Sbjct: 301 FLPRLIPTLLSNMSYSDDDESLADAEEDESFPDRDQDLKPRFHASRLHGSETGEDDDDDD 360
Query: 362 -VNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIA 420
VNVWNLRKCSAA LDVLSNVFGD+ILPTLMP+IQ L+ + D+AWK+REAAVL++GAIA
Sbjct: 361 AVNVWNLRKCSAAGLDVLSNVFGDDILPTLMPLIQQNLARTDDDAWKEREAAVLSIGAIA 420
Query: 421 EGCIKGLYPHLSEVI 435
EGCI GLYPHL +++
Sbjct: 421 EGCITGLYPHLPQIV 435
>sp|Q8BFY9|TNPO1_MOUSE Transportin-1 OS=Mus musculus GN=Tnpo1 PE=1 SV=2
Length = 898
Score = 341 bits (874), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 190/443 (42%), Positives = 284/443 (64%), Gaps = 21/443 (4%)
Query: 7 WQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVE 66
W+P EQG +I +LL++ SP +T ++ + Q+L+Q +Q+PDFNNYL F+L + + +
Sbjct: 13 WKPDEQGLQQILQLLKESQSPDTTIQRT-VQQKLEQLNQYPDFNNYLIFVLTKLKSEDEP 71
Query: 67 IRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVVQLGGI 126
R +GL+LKNN++ +++ +IKSE L +G + IR+TVG +++ + G +
Sbjct: 72 TRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGEL 131
Query: 127 AGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLL 186
W +LL L + LDS D N EGA AL KICED ++LDSDV + P+NI +P+ L
Sbjct: 132 QNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDV---LDRPLNIMIPKFL 188
Query: 187 QFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFN 246
QFF+ +R ++ VNQFI+ AL + +D +++ LF L+ D AEVRK VC A
Sbjct: 189 QFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEAEVRKNVCRALV 248
Query: 247 LLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRL 306
+L+EVR L PH+ N+ EYMLQ +D D++VALEACEFW + E + + L LP+L
Sbjct: 249 MLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKL 308
Query: 307 VPVLLSNMIYADDDESLVEA--EEDESLPDRDQDLKPRFHSSRLHGSEN----------- 353
+PVL++ M Y+D D L++ EEDE++PD +QD++PRFH SR ++
Sbjct: 309 IPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHEEDGIEEEDDD 368
Query: 354 -PEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAA 412
E DDDD ++ WNLRKCSAAALDVL+NV+ DE+LP ++P+++ L W +E+
Sbjct: 369 DDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLF---HHEWVVKESG 425
Query: 413 VLALGAIAEGCIKGLYPHLSEVI 435
+L LGAIAEGC++G+ P+L E+I
Sbjct: 426 ILVLGAIAEGCMQGMIPYLPELI 448
>sp|Q92973|TNPO1_HUMAN Transportin-1 OS=Homo sapiens GN=TNPO1 PE=1 SV=2
Length = 898
Score = 338 bits (868), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/443 (42%), Positives = 283/443 (63%), Gaps = 21/443 (4%)
Query: 7 WQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVE 66
W+P EQG +I +LL++ SP +T ++ + Q+L+Q +Q+PDFNNYL F+L + + +
Sbjct: 13 WKPDEQGLQQILQLLKESQSPDTTIQRT-VQQKLEQLNQYPDFNNYLIFVLTKLKSEDEP 71
Query: 67 IRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVVQLGGI 126
R +GL+LKNN++ +++ +IKSE L +G + IR+TVG +++ + G +
Sbjct: 72 TRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGEL 131
Query: 127 AGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLL 186
W +LL L + LDS D N EGA AL KICED ++LDSDV + P+NI +P+ L
Sbjct: 132 QNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDV---LDRPLNIMIPKFL 188
Query: 187 QFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFN 246
QFF+ +R ++ VNQFI+ AL + +D +++ LF L+ D EVRK VC A
Sbjct: 189 QFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALV 248
Query: 247 LLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRL 306
+L+EVR L PH+ N+ EYMLQ +D D++VALEACEFW + E + + L LP+L
Sbjct: 249 MLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKL 308
Query: 307 VPVLLSNMIYADDDESLVEA--EEDESLPDRDQDLKPRFHSSRLHGSEN----------- 353
+PVL++ M Y+D D L++ EEDE++PD +QD++PRFH SR ++
Sbjct: 309 IPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDEDGIEEEDDD 368
Query: 354 -PEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAA 412
E DDDD ++ WNLRKCSAAALDVL+NV+ DE+LP ++P+++ L W +E+
Sbjct: 369 DDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLF---HHEWVVKESG 425
Query: 413 VLALGAIAEGCIKGLYPHLSEVI 435
+L LGAIAEGC++G+ P+L E+I
Sbjct: 426 ILVLGAIAEGCMQGMIPYLPELI 448
>sp|Q3SYU7|TNPO1_BOVIN Transportin-1 OS=Bos taurus GN=TNPO1 PE=2 SV=2
Length = 898
Score = 338 bits (868), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/443 (42%), Positives = 283/443 (63%), Gaps = 21/443 (4%)
Query: 7 WQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVE 66
W+P EQG +I +LL++ SP +T ++ + Q+L+Q +Q+PDFNNYL F+L + + +
Sbjct: 13 WKPDEQGLQQILQLLKESQSPDTTIQRT-VQQKLEQLNQYPDFNNYLIFVLTKLKSEDEP 71
Query: 67 IRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVVQLGGI 126
R +GL+LKNN++ +++ +IKSE L +G + IR+TVG +++ + G +
Sbjct: 72 TRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGEL 131
Query: 127 AGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLL 186
W +LL L + LDS D N EGA AL KICED ++LDSDV + P+NI +P+ L
Sbjct: 132 QNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDV---LDRPLNIMIPKFL 188
Query: 187 QFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFN 246
QFF+ +R ++ VNQFI+ AL + +D +++ LF L+ D EVRK VC A
Sbjct: 189 QFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALV 248
Query: 247 LLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRL 306
+L+EVR L PH+ N+ EYMLQ +D D++VALEACEFW + E + + L LP+L
Sbjct: 249 MLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLIRHLPKL 308
Query: 307 VPVLLSNMIYADDDESLVEA--EEDESLPDRDQDLKPRFHSSRLHGSEN----------- 353
+PVL++ M Y+D D L++ EEDE++PD +QD++PRFH SR ++
Sbjct: 309 IPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDEDGIEEEEDD 368
Query: 354 -PEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAA 412
E DDDD ++ WNLRKCSAAALDVL+NV+ DE+LP ++P+++ L W +E+
Sbjct: 369 DDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLF---HHEWVVKESG 425
Query: 413 VLALGAIAEGCIKGLYPHLSEVI 435
+L LGAIAEGC++G+ P+L E+I
Sbjct: 426 ILVLGAIAEGCMQGMIPYLPELI 448
>sp|Q99LG2|TNPO2_MOUSE Transportin-2 OS=Mus musculus GN=Tnpo2 PE=2 SV=1
Length = 887
Score = 317 bits (813), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 273/442 (61%), Gaps = 20/442 (4%)
Query: 7 WQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVE 66
WQP EQG ++ +LL+ SP+ TA + + +L+Q +QFPDFNNYL F+L R + +
Sbjct: 3 WQPDEQGLQQVLQLLKDSQSPN-TATQRIVQDKLKQLNQFPDFNNYLIFVLTRLKSEDEP 61
Query: 67 IRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVVQLGGI 126
R +GL+LKNN++ Y+S P +IK E L +G A IR+T+G +++ + G +
Sbjct: 62 TRSLSGLILKNNVKAHYQSFPPPVADFIKQECLNNIGDASSLIRATIGILITTIASKGEL 121
Query: 127 AGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLL 186
W ELL L L+S D N EGA AL KICED ++LDSD P+NI +P+ L
Sbjct: 122 QMWPELLPQLCNLLNSEDYNTCEGAFGALQKICEDSSELLDSDALNR---PLNIMIPKFL 178
Query: 187 QFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFN 246
QFF+ +R ++ VNQFIM AL ++D +++ LF L+ D EVRK VC A
Sbjct: 179 QFFKHCSPKIRSHAIACVNQFIMDRAQALMDNIDTFIEHLFALAVDDDPEVRKNVCRALV 238
Query: 247 LLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRL 306
+L+EVR L PH+ ++ +YMLQ +D D++VALEACEFW + E + E L L +L
Sbjct: 239 MLLEVRIDRLIPHMHSIIQYMLQRTQDHDENVALEACEFWLTLAEQPICKEVLASHLVQL 298
Query: 307 VPVLLSNMIYADDDESLVEA--EEDESLPDRDQDLKPRFHSSR----LHGSENP------ 354
+P+L++ M Y++ D L++ EEDE++PD +QD+KPRFH SR H +E P
Sbjct: 299 IPILVNGMKYSEIDIILLKGDVEEDEAVPDSEQDIKPRFHKSRTVTLTHEAERPDSSEDA 358
Query: 355 -EDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAV 413
+DDDDD ++ WNLRKCSAAALDVL+NVF +E L ++ W +E+ +
Sbjct: 359 EDDDDDDALSDWNLRKCSAAALDVLANVFREE---LLPHLLPLLKGLLFHPEWVVKESGI 415
Query: 414 LALGAIAEGCIKGLYPHLSEVI 435
L LGAIAEGC++G+ P+L E+I
Sbjct: 416 LVLGAIAEGCMQGMVPYLPELI 437
>sp|O14787|TNPO2_HUMAN Transportin-2 OS=Homo sapiens GN=TNPO2 PE=1 SV=3
Length = 897
Score = 317 bits (813), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 273/442 (61%), Gaps = 20/442 (4%)
Query: 7 WQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVE 66
WQP EQG ++ +LL+ SP+ TA + + +L+Q +QFPDFNNYL F+L R + +
Sbjct: 3 WQPDEQGLQQVLQLLKDSQSPN-TATQRIVQDKLKQLNQFPDFNNYLIFVLTRLKSEDEP 61
Query: 67 IRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVVQLGGI 126
R +GL+LKNN++ Y+S P +IK E L +G A IR+T+G +++ + G +
Sbjct: 62 TRSLSGLILKNNVKAHYQSFPPPVADFIKQECLNNIGDASSLIRATIGILITTIASKGEL 121
Query: 127 AGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLL 186
W ELL L L+S D N EGA AL KICED ++LDSD P+NI +P+ L
Sbjct: 122 QMWPELLPQLCNLLNSEDYNTCEGAFGALQKICEDSSELLDSDALNR---PLNIMIPKFL 178
Query: 187 QFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFN 246
QFF+ +R ++ VNQFIM AL ++D +++ LF L+ D EVRK VC A
Sbjct: 179 QFFKHCSPKIRSHAIACVNQFIMDRAQALMDNIDTFIEHLFALAVDDDPEVRKNVCRALV 238
Query: 247 LLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRL 306
+L+EVR L PH+ ++ +YMLQ +D D++VALEACEFW + E + E L L +L
Sbjct: 239 MLLEVRIDRLIPHMHSIIQYMLQRTQDHDENVALEACEFWLTLAEQPICKEVLASHLVQL 298
Query: 307 VPVLLSNMIYADDDESLVEA--EEDESLPDRDQDLKPRFHSSRL----HGSENP------ 354
+P+L++ M Y++ D L++ EEDE++PD +QD+KPRFH SR H +E P
Sbjct: 299 IPILVNGMKYSEIDIILLKGDVEEDEAVPDSEQDIKPRFHKSRTVTLPHEAERPDGSEDA 358
Query: 355 -EDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAV 413
+DDDDD ++ WNLRKCSAAALDVL+NVF +E L ++ W +E+ +
Sbjct: 359 EDDDDDDALSDWNLRKCSAAALDVLANVFREE---LLPHLLPLLKGLLFHPEWVVKESGI 415
Query: 414 LALGAIAEGCIKGLYPHLSEVI 435
L LGAIAEGC++G+ P+L E+I
Sbjct: 416 LVLGAIAEGCMQGMVPYLPELI 437
>sp|O14089|IMB2_SCHPO Importin subunit beta-2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=kap104 PE=3 SV=1
Length = 910
Score = 255 bits (652), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 251/457 (54%), Gaps = 35/457 (7%)
Query: 7 WQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVE 66
W QEQ E+ +++ +S +S + + L++ PD NNYL IL A SV
Sbjct: 6 WVLQEQVLVELSEVIKNSLSENSQTRNAAL-NLLEKAKDIPDLNNYLTCILINATELSVS 64
Query: 67 IRQAAGLLLKNNLRTAYKSMSPSNQQ--YIKSELLPCLGAADRHIRSTVGTIVSVVVQLG 124
IR AAGLLLKNN+R + Q Y KS ++ L ++ IR G +++ ++
Sbjct: 65 IRSAAGLLLKNNVRVSSLESGSGLQSLDYTKSTVIRGLCDPEQLIRGISGNVITTIISRW 124
Query: 125 GIAGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPR 184
GI+ W E+L L+ L S EGA AL+KICED Q LD D G P++ +PR
Sbjct: 125 GISTWPEVLPQLMEMLSSPASTTQEGAFSALTKICEDSAQELDRDFNGTR--PLDFMIPR 182
Query: 185 LLQFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAA 244
++ + + +R +L +NQF+++ +L+ +D +L+ + L+ D S VRK VC A
Sbjct: 183 FIELARHENPKIRTDALFCLNQFVLIQSQSLYAHIDTFLETCYALATDVSPNVRKNVCQA 242
Query: 245 FNLLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLP 304
L++VRP + P L ++ EYML +D+D +VALEACEFW + E L +L
Sbjct: 243 LVYLLDVRPDKIAPSLGSIVEYMLYSTQDSDQNVALEACEFWLAIAEQPDLCSALGPYLD 302
Query: 305 RLVPVLLSNMIYADDDESLVEAEEDE-SLPDRDQDLKPRF--HSSRL----------HGS 351
++VP+LL M+Y+D D L+ + D+ + DR++D++P+ SR+ GS
Sbjct: 303 KIVPMLLQGMVYSDMDLLLLGNDADDYDVEDREEDIRPQHAKGKSRITLNTQGPITQQGS 362
Query: 352 ENPEDDDDDIVNV--------------WNLRKCSAAALDVLSNVFGDEILPTLMPVIQAK 397
N + D+ + + WNLRKCSAAALDVLS+ + +L ++P ++
Sbjct: 363 SNADADELEDEDEDDDEFDEDDDAFMDWNLRKCSAAALDVLSSFWKQRLLEIILPHLKQS 422
Query: 398 LSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSEV 434
L++ E WK +EA VLA+GAIAEGC+ G+ +L E+
Sbjct: 423 LTS---EDWKVQEAGVLAVGAIAEGCMDGMVQYLPEL 456
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 114/283 (40%), Gaps = 40/283 (14%)
Query: 181 FLPRLLQFFQSPHTSLRKL-------SLGSVNQFIMLMPS-----ALFVSMDQYLQGLFL 228
+LP L +F S S + L +LG +++ + S FV + LQGL
Sbjct: 452 YLPELYPYFLSLLDSKKPLVRTITCWTLGRYSKWASCLESEEDRQKYFVPL---LQGLLR 508
Query: 229 LSNDPSAEVRKLVCAAFNLLIE-VRPS---FLEPHLRNLFEYMLQVNKDTDDDVALEACE 284
+ D + +V++ C+AF +L E PS +LEP L NL + Q + + + +A +
Sbjct: 509 MVVDNNKKVQEAGCSAFAILEEQAGPSLVPYLEPILTNL-AFAFQKYQRKNVLILYDAVQ 567
Query: 285 FWHSYFEAQLPHENLKEFLPRLVPVLLSNMIYADDD----------ESLVEAEEDESLPD 334
Y + L + E L + P+L + DDD S+ A D P
Sbjct: 568 TLADYVGSALNDKRYIELL--ITPLLQKWSMIPDDDPNLFPLFECLSSVAVALRDGFAPF 625
Query: 335 RDQDLKPRFHSSRLHGSENPEDDDDDIVNVWNLRKCSAAALDVLSNV---FGDEILPTLM 391
+ F R +D V+V + R LD++S + G ++ P L
Sbjct: 626 AAETYARTFRILRNTLYLITTAQNDPTVDVPD-RDFLVTTLDLVSGIIQALGSQVSPLLA 684
Query: 392 ----PVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPH 430
P+ Q + DE + R++A LG + C + P+
Sbjct: 685 QADPPLGQIIGICAKDEVPEVRQSAYALLGDMCMYCFDQIRPY 727
>sp|Q55CQ7|TNPO_DICDI Transportin OS=Dictyostelium discoideum GN=tnpo PE=3 SV=1
Length = 931
Score = 248 bits (633), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 200/335 (59%), Gaps = 5/335 (1%)
Query: 7 WQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVE 66
W P + G ++ +L S S QI ++L ++ PD+NNYL I E +
Sbjct: 4 WVPNQDGLKQLVYVLNLSNSTSREV-HDQIREELDKFHSVPDYNNYLTLIFKSNELQP-H 61
Query: 67 IRQAAGLLLKNNLRTAYKSMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVVQLGGI 126
IR AGL+LK N++ ++ M Q YIK E+LP L D +R TVG I++ +++
Sbjct: 62 IRSVAGLVLKTNIKQYFEKMPREVQNYIKREILPVLSDPDASVRHTVGNIITNLIKKSCF 121
Query: 127 AGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLL 186
+ W ELL AL LDSN + +EG++ LS +CED + LDSD G A +N +P+L+
Sbjct: 122 SEWPELLPALNLALDSNSQDLIEGSLYTLSLLCEDSTKKLDSDDSGRA---LNQLIPKLI 178
Query: 187 QFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFN 246
FF+ + RK +L S++ FI+ MP AL ++M+ +L+G+F +S DPS VR VC
Sbjct: 179 MFFKCNNADFRKKALVSISYFIISMPGALLINMEAFLKGIFSMSEDPSEAVRTNVCKTLV 238
Query: 247 LLIEVRPSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRL 306
L+E + FL P+++++ +YML KD ++VALEACEFW + +A+ + L+++LP L
Sbjct: 239 TLVETKIEFLLPYIKDVIQYMLHATKDKSEEVALEACEFWTAISQAEGCRDLLRDYLPVL 298
Query: 307 VPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKP 341
VP+LL+ M+Y + D ++ +D PDR QD+KP
Sbjct: 299 VPILLNGMVYTEQDYEYLDQGDDSMTPDRPQDIKP 333
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 365 WNLRKCSAAALDVLSNVFGD-EILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGC 423
W +RK SA A+DVLS +F D E L +P+I+ +++ W RE+A+LALGAIA+G
Sbjct: 405 WTIRKSSAFAIDVLSGIFPDAEYLSVTLPLIEQRMNEQN--PWPVRESAILALGAIADGS 462
Query: 424 IKGLYPHLSEVI 435
GL PHLS+VI
Sbjct: 463 KNGLAPHLSKVI 474
>sp|P38217|IMB2_YEAST Importin subunit beta-2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=KAP104 PE=1 SV=1
Length = 918
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 235/461 (50%), Gaps = 51/461 (11%)
Query: 6 AWQPQEQGFNEICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSV 65
W+P E ++ LL+ +SP+ ++ + ++ + P+F NYL +IL E V
Sbjct: 4 TWKPAEDYVLQLATLLQNCMSPNPEI-RNNAMEAMENFQLQPEFLNYLCYILIEGESDDV 62
Query: 66 -----------EIRQAAGLLLKNNLRTAYKSMSPSNQQ---YIKSELLPCLGAADRHIRS 111
R AG+LLKN++ ++ SN Y+KS ++ L ++ ++ S
Sbjct: 63 LKQHYSLQDLQNNRATAGMLLKNSMLGG-NNLIKSNSHDLGYVKSNIIHGLYNSNNNLVS 121
Query: 112 TVGTIVSVVV------QLGGIAGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQV 165
V IV + Q L++L L+ N E ++ ALSKI ED Q
Sbjct: 122 NVTGIVITTLFSTYYRQHRDDPTGLQMLYQLLELTS----NGNEPSIKALSKIMEDSAQF 177
Query: 166 LDSDVPGLAECPINIFLPRLLQFFQSPHTS--LRKLSLGSVNQFIMLMPSALFVSMDQYL 223
+ G + P+ L +F +P+ S +R S+ +N I L + V +D++L
Sbjct: 178 FQLEWSGNTK-PMEALLDSFFRFISNPNFSPVIRSESVKCINTVIPLQTQSFIVRLDKFL 236
Query: 224 QGLFLLS-NDPSAEVRKLVCAAFNLLIEVRPSFLEPHLRNLFEYMLQ-VNKDTDDDVALE 281
+ +F L+ ND + VR +C +F+ L+E RP L HL + ++ML + ++ VA+E
Sbjct: 237 EIIFQLAQNDENDLVRAQICISFSFLLEFRPDKLVSHLDGIVQFMLHLITTVNEEKVAIE 296
Query: 282 ACEFWHSYFEA-QLPHENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDES--LPDRDQD 338
ACEF H++ + +P L+ ++ +VP+LLS M+Y ++ L+EA D+ L D+D+D
Sbjct: 297 ACEFLHAFATSPNIPEHILQPYVKDIVPILLSKMVYNEESIVLLEASNDDDAFLEDKDED 356
Query: 339 LKP---RFHSSRLHGS-----------ENPEDDDDDIVNVWNLRKCSAAALDVLSNVFGD 384
+KP R + G+ ++ +D+D D+ WNLRKCSAA LDV++N+
Sbjct: 357 IKPIAPRIVKKKEAGNGEDADDNEDDDDDDDDEDGDVDTQWNLRKCSAATLDVMTNILPH 416
Query: 385 EILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIK 425
+++ P ++ L G + W REA +LALGA+AEG +K
Sbjct: 417 QVMDIAFPFLREHL---GSDRWFIREATILALGAMAEGGMK 454
>sp|O18388|IMB_DROME Importin subunit beta OS=Drosophila melanogaster GN=Fs(2)Ket PE=2
SV=2
Length = 884
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 183/437 (41%), Gaps = 72/437 (16%)
Query: 16 EICRLLEQQISPSSTADKSQIWQQ---LQQY--SQFPDFNNYLAFILARAEGKSVEIRQA 70
++ +LE+ +SP DK+++ L+Q S P+F L+ IL +V R A
Sbjct: 8 QLIAILEKTVSP----DKNELLSAKNFLEQAAASNLPEFLKALSEILVNTANSAVA-RMA 62
Query: 71 AGLLLKNNLRTAYKSMSPSNQ-----------QYIKSELLPCLGAADRHIRSTVGTIVSV 119
AGL LKN+L + + +S Q + IK+ +L LG + + V
Sbjct: 63 AGLQLKNHLTSKDEKVSQQYQDRWHQFPSEIRELIKNNILAALGTENTRPSCAAQCVAYV 122
Query: 120 VVQLGGIAGWLELLQALVTCLDSNDIN--HMEGAMDALSKICEDIPQVLDSDVPGLAECP 177
V I W L+Q LV + S + H E A++A+ IC+DI G+ E
Sbjct: 123 AVIELPINRWPMLIQTLVNKVVSEGSSEMHRESALEAIGYICQDIR-------FGVMENQ 175
Query: 178 INIFLPRLLQFFQS--PHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSA 235
N L ++ + P +R + +++ + S M++ + ++
Sbjct: 176 SNDVLTAIIHGMRKVEPSNHVRLAATTALHNSLEFTKSNFEKDMERNFI-MEVVCEATQC 234
Query: 236 EVRKLVCAAFNLLIEVRP---SFLEPHL-RNLFEYMLQVNKDTDDDVALEACEFWHSYFE 291
+ ++ AA L+++ ++EP++ + LF L K +D VAL+ EFW
Sbjct: 235 QDSQICVAALQCLVKIMTLYYQYMEPYMAQALFPITLAAMKSDNDAVALQGIEFW----- 289
Query: 292 AQLPHENLKEFLPRLVPVLLSNMIYADDDESL--VEAEEDESLPDRDQDLKPR----FHS 345
SN+ + D ++ EA + P R R F +
Sbjct: 290 --------------------SNVCDEEIDLAIESQEATDQGRAPQRVSKHYARGALQFLT 329
Query: 346 SRLHGSENPEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEA 405
L +D+ DD + W+ K ++ L VL+ DEI+P ++P I+ + +
Sbjct: 330 PVLVEKLTKQDECDD-EDTWSPAKAASVCLMVLATCCEDEIVPHVLPFIKENIESPN--- 385
Query: 406 WKDREAAVLALGAIAEG 422
W+ R+AAV+ G++ G
Sbjct: 386 WRFRDAAVMTFGSVLNG 402
>sp|P70168|IMB1_MOUSE Importin subunit beta-1 OS=Mus musculus GN=Kpnb1 PE=1 SV=2
Length = 876
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 181/445 (40%), Gaps = 88/445 (19%)
Query: 16 EICRLLEQQISPSSTA-DKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVEIRQAAGLL 74
E+ +LE+ +SP + +Q + + P F L+ +LA G S R AAGL
Sbjct: 2 ELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANP-GNSQVARVAAGLQ 60
Query: 75 LKNNLRTAYKSMSPSNQQY-----------IKSELLPCLGAADRHIRSTVGTIVSVVVQL 123
+KN+L + + QQ +K+ +L LG S + +
Sbjct: 61 IKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAE 120
Query: 124 GGIAGWLELLQALVT-CLDSNDINHM-EGAMDALSKICEDI-PQVLDSDVPGLAECPINI 180
++ W EL+ LV + N HM E ++A+ IC+DI P+ L N
Sbjct: 121 IPVSQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS--------NE 172
Query: 181 FLPRLLQFFQSPHTSLRKLSLGSVNQFIMLMPSALFV--SMDQYLQGLFLL------SND 232
L ++Q + S + L + N L+ S F + D+ + F++ +
Sbjct: 173 ILTAIIQGMRKEEPS-NNVKLAATN---ALLNSLEFTKANFDKESERHFIMQVVCEATQC 228
Query: 233 PSAEVRKLVCAAFNL--LIEVRPSFLEPHLR-NLFEYMLQVNKDTDDDVALEACEFWHSY 289
P VR V A NL ++ + ++E ++ LF ++ K D+VAL+ EFW
Sbjct: 229 PDTRVR--VAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFW--- 283
Query: 290 FEAQLPHENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLH 349
SN+ + D ++ +E E +P H+S+ +
Sbjct: 284 ----------------------SNVCDEEMDLAIEASEAAEQ-------GRPPEHTSKFY 314
Query: 350 GSEN------------PEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAK 397
+ D++D + WN K + L +LS D+I+P ++P I+
Sbjct: 315 AKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLSTCCEDDIVPHVLPFIKEH 374
Query: 398 LSASGDEAWKDREAAVLALGAIAEG 422
+ + W+ R+AAV+A G+I EG
Sbjct: 375 IK---NPDWRYRDAAVMAFGSILEG 396
>sp|Q14974|IMB1_HUMAN Importin subunit beta-1 OS=Homo sapiens GN=KPNB1 PE=1 SV=2
Length = 876
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 179/445 (40%), Gaps = 88/445 (19%)
Query: 16 EICRLLEQQISPSSTA-DKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVEIRQAAGLL 74
E+ +LE+ +SP + +Q + + P F L+ +LA G S R AAGL
Sbjct: 2 ELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANP-GNSQVARVAAGLQ 60
Query: 75 LKNNLRTAYKSMSPSNQQY-----------IKSELLPCLGAADRHIRSTVGTIVSVVVQL 123
+KN+L + + QQ +K+ +L LG S + +
Sbjct: 61 IKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAE 120
Query: 124 GGIAGWLELLQALVT-CLDSNDINHM-EGAMDALSKICEDI-PQVLDSDVPGLAECPINI 180
+ W EL+ LV + N HM E ++A+ IC+DI P+ L N
Sbjct: 121 IPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS--------NE 172
Query: 181 FLPRLLQFFQSPHTSLRKLSLGSVNQFIMLMPSALFV--SMDQYLQGLFLL------SND 232
L ++Q + S + L + N L+ S F + D+ + F++ +
Sbjct: 173 ILTAIIQGMRKEEPS-NNVKLAATN---ALLNSLEFTKANFDKESERHFIMQVVCEATQC 228
Query: 233 PSAEVRKLVCAAFNL--LIEVRPSFLEPHLR-NLFEYMLQVNKDTDDDVALEACEFWHSY 289
P VR V A NL ++ + ++E ++ LF ++ K D+VAL+ EFW
Sbjct: 229 PDTRVR--VAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFW--- 283
Query: 290 FEAQLPHENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLH 349
SN+ + D ++ +E E +P H+S+ +
Sbjct: 284 ----------------------SNVCDEEMDLAIEASEAAEQ-------GRPPEHTSKFY 314
Query: 350 GSEN------------PEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAK 397
+ D++D + WN K + L +L+ D+I+P ++P I+
Sbjct: 315 AKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEH 374
Query: 398 LSASGDEAWKDREAAVLALGAIAEG 422
+ + W+ R+AAV+A G I EG
Sbjct: 375 IK---NPDWRYRDAAVMAFGCILEG 396
>sp|O00410|IPO5_HUMAN Importin-5 OS=Homo sapiens GN=IPO5 PE=1 SV=4
Length = 1097
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 173/437 (39%), Gaps = 70/437 (16%)
Query: 20 LLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILA--RAEGKSVEIRQAAGLLLKN 77
LL +SP + K Q + Y P + + F+L R + E RQ A +LL+
Sbjct: 14 LLGNLLSPDNVVRK----QAEETYENIPG-QSKITFLLQAIRNTTAAEEARQMAAVLLRR 68
Query: 78 NLRTAYKSMSPS----NQQYIKSELLPCL-----GAADRHIRSTVGTIVSVVVQLGGIAG 128
L +A+ + P+ Q IKSELL + + + + + ++ G
Sbjct: 69 LLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAELARNLIDEDGNNQ 128
Query: 129 WLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLLQF 188
W E L+ L + S ++ E A+ I + P + + + +++ L+Q
Sbjct: 129 WPEGLKFLFDSVSSQNVGLREAAL----HIFWNFPGIFGNQ----QQHYLDVIKRMLVQC 180
Query: 189 FQ-SPHTSLRKLSLGSVNQFIMLMPS--ALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAF 245
Q H S+R LS + FI+ ALF L G ND + V +
Sbjct: 181 MQDQEHPSIRTLSARATAAFILANEHNVALFKHFADLLPGFLQAVNDSCYQNDDSVLKSL 240
Query: 246 NLLIEVRPSFLEPHLRNLFEYMLQVNKDTD-----DDVALEACEFWHSYFEAQL-PHENL 299
+ + P +L PHL + L++ DT +ALE A L H N+
Sbjct: 241 VEIADTVPKYLRPHLEATLQLSLKLCGDTSLNNMQRQLALEVIVTLSETAAAMLRKHTNI 300
Query: 300 KEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDD 359
+ + +P +L+ M+ ++DE A+E EDDD
Sbjct: 301 ---VAQTIPQMLAMMVDLEEDEDWANADE-------------------------LEDDDF 332
Query: 360 DIVNVWNLRKCSAAALDVLSNVFGDE-ILPTLMPVIQAKLSASGDEAWKDREAAVLALGA 418
D V +ALD ++ G + +LP + I L + WK R A ++AL A
Sbjct: 333 DSNAV-----AGESALDRMACGLGGKLVLPMIKEHIMQMLQ---NPDWKYRHAGLMALSA 384
Query: 419 IAEGCIKGLYPHLSEVI 435
I EGC + + L+E++
Sbjct: 385 IGEGCHQQMEGILNEIV 401
>sp|Q8BKC5|IPO5_MOUSE Importin-5 OS=Mus musculus GN=Ipo5 PE=1 SV=3
Length = 1097
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 174/437 (39%), Gaps = 70/437 (16%)
Query: 20 LLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILA--RAEGKSVEIRQAAGLLLKN 77
LL +SP + K Q + Y P + + F+L R + E RQ A +LL+
Sbjct: 14 LLGNLLSPDNVVRK----QAEETYENIPG-RSKITFLLQAIRNTTAAEEARQMAAVLLRR 68
Query: 78 NLRTAYKSMSPS----NQQYIKSELLPCL-----GAADRHIRSTVGTIVSVVVQLGGIAG 128
L +A+ + P+ Q IKSELL + + + I + ++ G
Sbjct: 69 LLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKICDIAAELARNLIDEDGNNQ 128
Query: 129 WLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLLQF 188
W E L+ L + S ++ E A+ I + P + + + +++ L+Q
Sbjct: 129 WPEGLKFLFDSVSSQNMGLREAAL----HIFWNFPGIFGNQ----QQHYLDVIKRMLVQC 180
Query: 189 FQ-SPHTSLRKLSLGSVNQFIMLMPS--ALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAF 245
Q H S+R LS + FI+ ALF L G ND + V +
Sbjct: 181 MQDQEHPSIRTLSARATAAFILANEHNVALFKHFADLLPGFLQAVNDSCYQNDDSVLKSL 240
Query: 246 NLLIEVRPSFLEPHLRNLFEYMLQVNKDTD-----DDVALEACEFWHSYFEAQL-PHENL 299
+ + P +L PHL + L++ DT+ +ALE A L H +L
Sbjct: 241 VEIADTVPKYLRPHLEATLQLSLKLCGDTNLNNMQRQLALEVIVTLSETAAAMLRKHTSL 300
Query: 300 KEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDD 359
+ + +P +L+ M+ ++DE A+E EDDD
Sbjct: 301 ---IAQTIPQMLAMMVDLEEDEDWANADE-------------------------LEDDDF 332
Query: 360 DIVNVWNLRKCSAAALDVLSNVFGDE-ILPTLMPVIQAKLSASGDEAWKDREAAVLALGA 418
D V +ALD ++ G + +LP + I L + WK R A ++AL A
Sbjct: 333 DSNAV-----AGESALDRMACGLGGKLVLPMIKEHIMQMLQ---NPDWKYRHAGLMALSA 384
Query: 419 IAEGCIKGLYPHLSEVI 435
I EGC + + L+E++
Sbjct: 385 IGEGCHQQMEGILNEIV 401
>sp|Q06142|IMB1_YEAST Importin subunit beta-1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=KAP95 PE=1 SV=1
Length = 861
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 132/315 (41%), Gaps = 64/315 (20%)
Query: 127 AGWLELLQALVTCLDSNDINHMEGA-MDALSKICEDIPQVLDSDVPGLAECPINIFLPRL 185
W EL++ +V + +++ A + AL +CE D L NI + +
Sbjct: 130 GAWPELMKIMVDNTGAEQPENVKRASLLALGYMCESA----DPQSQALVSSSNNILIA-I 184
Query: 186 LQFFQSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQG-----LFLLSNDPSAEVRKL 240
+Q QS TS + + L ++N L S +F+ + +G + ++ AE ++
Sbjct: 185 VQGAQSTETS-KAVRLAALN---ALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEV 240
Query: 241 VCAAFNLLIEVRP---SFLEPHLRN-LFEYMLQVNKDTDDDVALEACEFWHSYFE----- 291
AAF L ++ +F++P++ L+ + K +D VA EFW + E
Sbjct: 241 QAAAFGCLCKIMSLYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDI 300
Query: 292 ----AQLPHENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSR 347
AQ P L+ + L + +D+ P +
Sbjct: 301 AYELAQFPQSPLQSYNFALSSI---------------------------KDVVPNLLNLL 333
Query: 348 LHGSENPEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWK 407
+E+PEDDD WN+ + A L + + G+ IL ++ ++ ++A W+
Sbjct: 334 TRQNEDPEDDD------WNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNITADN---WR 384
Query: 408 DREAAVLALGAIAEG 422
+REAAV+A G+I +G
Sbjct: 385 NREAAVMAFGSIMDG 399
>sp|P52296|IMB1_RAT Importin subunit beta-1 OS=Rattus norvegicus GN=Kpnb1 PE=1 SV=1
Length = 875
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 184/444 (41%), Gaps = 87/444 (19%)
Query: 16 EICRLLEQQISPSSTA-DKSQIWQQLQQYSQFPDFNNYLAFILARAEGKSVEIRQAAGLL 74
E+ +LE+ +SP + +Q + + P F L+ +LA G S R AAGL
Sbjct: 2 ELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANP-GNSQVARVAAGLQ 60
Query: 75 LK------NNLRTAYK----SMSPSNQQYIKSELLPCLGAADRHIRSTVGTIVSVVVQLG 124
++ +++ Y+ ++ + ++ +K+ +L LG S + +
Sbjct: 61 IRLLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAEI 120
Query: 125 GIAGWLELLQALVT-CLDSNDINHM-EGAMDALSKICEDI-PQVLDSDVPGLAECPINIF 181
++ W EL+ LV + N HM E ++A+ IC+DI P+ L N
Sbjct: 121 PVSQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS--------NEI 172
Query: 182 LPRLLQFFQSPHTSLRKLSLGSVNQFIMLMPSALFV--SMDQYLQGLFLL------SNDP 233
L ++Q + S + L + N L+ S F + D+ + F++ + P
Sbjct: 173 LTAIIQGMRKEEPS-NNVKLAATN---ALLNSLEFTKANFDKESERHFIMQVVCEATQCP 228
Query: 234 SAEVRKLVCAAFNL--LIEVRPSFLEPHLR-NLFEYMLQVNKDTDDDVALEACEFWHSYF 290
VR V A NL ++ + ++E ++ LF ++ K D+VAL+ EFW
Sbjct: 229 DTRVR--VAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFW---- 282
Query: 291 EAQLPHENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHG 350
SN+ + D ++ +E E +P H+S+ +
Sbjct: 283 ---------------------SNVCDEEMDLAIEASEAAEQ-------GRPPEHTSKFYA 314
Query: 351 SEN------------PEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKL 398
+ D++D + WN K + L +LS D+I+P ++P I+ +
Sbjct: 315 KGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLSTCCEDDIVPHVLPFIKEHI 374
Query: 399 SASGDEAWKDREAAVLALGAIAEG 422
+ W+ R+AAV+A G+I EG
Sbjct: 375 K---NPDWRYRDAAVMAFGSILEG 395
>sp|O13864|IMB1_SCHPO Importin subunit beta-1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=kap95 PE=3 SV=1
Length = 863
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 187/443 (42%), Gaps = 92/443 (20%)
Query: 20 LLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFILAR-AEGKSVE-IRQAAGLLLKN 77
L Q +SP + + +QL+ ++ DF Y+ + A S+ IR AAGL LKN
Sbjct: 6 FLAQTLSPDANV-RLNAEKQLENAAR-TDFAQYMVLLAQELANDNSMPYIRMAAGLALKN 63
Query: 78 NL-----------RTAYKSMSPSNQQYIKSELLPCLGAADRHI-RSTVGTIVSVVVQLGG 125
+ + ++S+ +Q +KS L LG+++ +S + ++
Sbjct: 64 AITAREEARKLEYQQLWQSLPVEIKQQVKSLALQTLGSSEHQAGQSAAQLVAAIAAYELA 123
Query: 126 IAGWLELLQALVTCLDSNDINHM-EGAMDALSKICEDI-PQVLDSDVPGLAECPINIFLP 183
W +L+ LV + + + + ++ + ICE + P+VL + N L
Sbjct: 124 TNQWPDLMVTLVANVGEGQPSALKQHSLQTIGYICESVSPEVLSAQS--------NAILT 175
Query: 184 RLLQFFQS--PHTSLRKLSLGSVNQFIMLMPSALFV--------SMDQYLQGLFLLSNDP 233
++ + P ++R +LG+ L S FV + +Q + + P
Sbjct: 176 AVVAGARKEEPDAAVRLAALGA------LYDSLEFVRENFNNEYERNYIMQVVCEATQSP 229
Query: 234 SAEVRKLVCAAFNLLIEVR-------PSFLEPHLRNLFEYMLQVNKDTDDDVALEACEFW 286
A ++ AAF L+++ P ++E + LF Q +T++ VAL+A EFW
Sbjct: 230 EASIQT---AAFGCLVKIMHLYYDTMPFYME---KALFALTTQGMYNTNEQVALQAVEFW 283
Query: 287 HSYFEAQLPHENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSS 346
+ E ++ NL+ + EA++ +P R R ++
Sbjct: 284 STVCEEEI-EVNLE----------------------IQEAQDLNEVPARQNHGFARAAAA 320
Query: 347 -------RLHGSENPEDDDDDIVNVWNLRKCSAAALDVLSNVFGDEILPTLMPVIQAKLS 399
+L +++ + D+DD WN+ +A L + + V GD I+ ++ ++ +
Sbjct: 321 DILPVLLKLLCNQDEDADEDD----WNISMAAATCLQLFAQVVGDLIVNPVLAFVEQNIQ 376
Query: 400 ASGDEAWKDREAAVLALGAIAEG 422
+ W REAAV+A G++ EG
Sbjct: 377 ---NPDWHQREAAVMAFGSVLEG 396
>sp|Q8BIV3|RNBP6_MOUSE Ran-binding protein 6 OS=Mus musculus GN=Ranbp6 PE=2 SV=3
Length = 1105
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 172/445 (38%), Gaps = 78/445 (17%)
Query: 16 EICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFIL--ARAEGKSVEIRQAAGL 73
E +LL+ I+PS + Q + Y P F+L R E+RQ A
Sbjct: 18 EFYQLLKNLINPSCMVRR----QAEEVYENIPGLCKT-TFLLDAVRNRRAGYEVRQMAAA 72
Query: 74 LLKNNLRTA----YKSMSPSNQQYIKSELLPCLG-AADRHIRSTVGTIVSVV----VQLG 124
LL+ L + Y ++ P Q+ +K EL+ + +R + I +V+ +
Sbjct: 73 LLRRLLSSGFEEVYPNLPPEVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDES 132
Query: 125 GIAGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGL----AECPINI 180
G W E L+ L+ + S ++ E A+ PG+ ++I
Sbjct: 133 GTNHWPEGLKFLIDSIHSKNVVLWEVALHVFWHF------------PGIFGNQDRHDLDI 180
Query: 181 FLPRLLQFFQ-SPHTSLRKLSLGSVNQFIMLMPS--ALFVSMDQYLQGLFLLSNDPSAEV 237
L Q Q H ++R LS + F++ + ALF L G+ ND +
Sbjct: 181 IKRLLDQCIQDQEHPAIRTLSARAAATFVLANENNIALFKDFADLLPGILQAVNDSCYQD 240
Query: 238 RKLVCAAFNLLIEVRPSFLEPHLRNLFEYMLQVNKDT-----DDDVALEACEFWHSYFEA 292
V + + + P +L P+L + + L++ D+ +ALE
Sbjct: 241 DDSVLESLVEIADTVPKYLGPYLEDTLQLSLKLCGDSRLSNLQRQLALEVIVTLSETATP 300
Query: 293 QL-PHENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGS 351
L H N+ + + VP +L+ M+ DD+ V A+E
Sbjct: 301 MLKKHTNI---IAQAVPHILAMMVDLQDDDDWVNADE----------------------- 334
Query: 352 ENPEDDDDDIVNVWNLRKCSAAALDVLSNVFGDE-ILPTLMPVIQAKLSASGDEAWKDRE 410
E+DD D V + +ALD L+ G + +LP I L + WK R
Sbjct: 335 --MEEDDFDSNAV-----AAESALDRLACGLGGKVVLPMTKEHIMQMLQSPD---WKCRH 384
Query: 411 AAVLALGAIAEGCIKGLYPHLSEVI 435
A ++AL AI EGC + + P L E +
Sbjct: 385 AGLMALSAIGEGCHQQMEPILDETV 409
>sp|O60518|RNBP6_HUMAN Ran-binding protein 6 OS=Homo sapiens GN=RANBP6 PE=1 SV=2
Length = 1105
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 173/442 (39%), Gaps = 72/442 (16%)
Query: 16 EICRLLEQQISPSSTADKSQIWQQLQQYSQFPDFNNYLAFIL--ARAEGKSVEIRQAAGL 73
E +LL+ I+PS + Q + Y P F+L R E+RQ A
Sbjct: 18 EFYQLLKNLINPSCMVRR----QAEEIYENIPGLCK-TTFLLDAVRNRRAGYEVRQMAAA 72
Query: 74 LLKNNLRTAYKSMSPS----NQQYIKSELLPCLG-AADRHIRSTVGTIVSVV----VQLG 124
LL+ L + ++ + P+ Q+ +K EL+ + +R + I +V+ +
Sbjct: 73 LLRRLLSSGFEEVYPNLPADVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDED 132
Query: 125 GIAGWLELLQALVTCLDSNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPR 184
G W E L+ L+ + S ++ E A+ P + G E + R
Sbjct: 133 GTNHWPEGLKFLIDSIYSKNVVLWEVALHVFWHF----PGIF-----GTQERHDLDIIKR 183
Query: 185 LL-QFFQ-SPHTSLRKLSLGSVNQFIMLMPS--ALFVSMDQYLQGLFLLSNDPSAEVRKL 240
LL Q Q H ++R LS + F++ + ALF L G+ ND +
Sbjct: 184 LLDQCIQDQEHPAIRTLSARAAAAFVLANENNIALFKDFADLLPGILQAVNDSCYQDDDS 243
Query: 241 VCAAFNLLIEVRPSFLEPHLRNLFEYMLQVNKDT-----DDDVALEACEFWHSYFEAQLP 295
V + + + P +L P+L + + L++ D+ +ALE L
Sbjct: 244 VLESLVEIADTVPKYLGPYLEDTLQLSLKLCGDSRLSNLQRQLALEVIVTLSETATPMLK 303
Query: 296 -HENLKEFLPRLVPVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENP 354
H N+ + + VP +L+ M+ DDE V A+E
Sbjct: 304 KHTNI---IAQAVPHILAMMVDLQDDEDWVNADE-------------------------M 335
Query: 355 EDDDDDIVNVWNLRKCSAAALDVLSNVFGDEI-LPTLMPVIQAKLSASGDEAWKDREAAV 413
E+DD D V + +ALD L+ G ++ LP I L + WK R A +
Sbjct: 336 EEDDFDSNAV-----AAESALDRLACGLGGKVVLPMTKEHIMQMLQSPD---WKYRHAGL 387
Query: 414 LALGAIAEGCIKGLYPHLSEVI 435
+AL AI EGC + + L E +
Sbjct: 388 MALSAIGEGCHQQMESILDETV 409
>sp|Q96P70|IPO9_HUMAN Importin-9 OS=Homo sapiens GN=IPO9 PE=1 SV=3
Length = 1041
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 17/151 (11%)
Query: 48 DFNNYLAFILARAEGKSVEIRQAAGLLLKNNLRTAYKSMS-----PSNQQYIK---SELL 99
+F +LA + +G ++ IRQ A ++LK + T + + S P + K ELL
Sbjct: 55 EFGVHLAELTVDPQG-ALAIRQLASVILKQYVETHWCAQSEKFRPPETTERAKIVIRELL 113
Query: 100 P-CLGAADRHIRSTVGTIVSVVVQLGGIAGWLELLQALVTCLDSNDINHMEGAMDALSKI 158
P L + +RS+V VS + W +L L+ L S D+N + GAM L++
Sbjct: 114 PNGLRESISKVRSSVAYAVSAIAHWDWPEAWPQLFNLLMEMLVSGDLNAVHGAMRVLTEF 173
Query: 159 CEDIPQVLDSDVPGLAECPINIFLPRLLQFF 189
+ V D+ +P +A + LP + + F
Sbjct: 174 TRE---VTDTQMPLVAP----VILPEMYKIF 197
>sp|Q91YE6|IPO9_MOUSE Importin-9 OS=Mus musculus GN=Ipo9 PE=1 SV=3
Length = 1041
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 17/151 (11%)
Query: 48 DFNNYLAFILARAEGKSVEIRQAAGLLLKNNLRTAYKSMS-----PSNQQYIK---SELL 99
+F +LA + +G ++ IRQ A ++LK + T + + S P + K ELL
Sbjct: 55 EFGVHLAELTVDPQG-ALAIRQLASVILKQYVETHWCAQSEKFRPPETTERAKIVIRELL 113
Query: 100 P-CLGAADRHIRSTVGTIVSVVVQLGGIAGWLELLQALVTCLDSNDINHMEGAMDALSKI 158
P L + +RS+V VS + W +L L+ L S D+N + GAM L++
Sbjct: 114 PNGLRESISKVRSSVAYAVSAIAHWDWPEAWPQLFNLLMEMLVSGDLNAVHGAMRVLTEF 173
Query: 159 CEDIPQVLDSDVPGLAECPINIFLPRLLQFF 189
+ V D+ +P +A + LP + + F
Sbjct: 174 TRE---VTDTQMPLVAP----VILPEMYKIF 197
>sp|O74476|IMB3_SCHPO Importin subunit beta-3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=sal3 PE=3 SV=1
Length = 1095
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 149/379 (39%), Gaps = 78/379 (20%)
Query: 83 YKSMSPSNQQYIKSELLPC-----LGAADRHIRSTVGTIVSVVVQLGGIAGWLELLQALV 137
+ S+S ++Q ++S+LL C + + T+ I + G W EL+ +
Sbjct: 88 FSSISNESKQSLQSQLLACFVKESVPTVRNKLCDTIAEIARSIYDCQG--EWPELINVIF 145
Query: 138 TCLDSNDINHMEGAMDALSKICEDIPQVL---DSDVP-----GLAECPINIFLPRLLQFF 189
++S D + E ++ + P++L DS V GLA+ I + + +
Sbjct: 146 NAVNSPDESFRESVFRTITSL----PRLLSGQDSAVTPLFTTGLADPSIRVRISAARAY- 200
Query: 190 QSPHTSLRKLSLGSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFNLLI 249
+ + + +Q I L+PS + + L L D ++ A +
Sbjct: 201 ---SAVILESKQSTRDQVIPLLPSLMNI--------LPPLQQDRDSDNLADCLMAITEIA 249
Query: 250 EVRPSFLEPHLRNLFEYMLQVNKDTD-DDVALEACEFWHSYFEAQLPHENLK--EFLPRL 306
EV P +P ++ + L + KD + D+ A +A F P K ++ +L
Sbjct: 250 EVFPKLFKPIFESVIAFGLGIIKDKELDNSARQAALELLVCFSEGAPAMCRKSSDYTDQL 309
Query: 307 V--PVLLSNMIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDDDIVNV 364
V +LL + D ++ E +E + D DQD E D + +V
Sbjct: 310 VLQCLLLMTDVAGDPEDEAEELQEWLNTDDLDQD----------------ESDANHVV-- 351
Query: 365 WNLRKCSAAALDVLSNVFGDEI--------LPTLMPVIQAKLSASGDEAWKDREAAVLAL 416
+ A+D LS G + LP L+P + W +R AA++A+
Sbjct: 352 ------AEQAMDRLSRKLGGKTILPPSFTWLPRLIP----------SQKWSERHAALMAI 395
Query: 417 GAIAEGCIKGLYPHLSEVI 435
+IAEG K + LS V+
Sbjct: 396 SSIAEGAEKLMKKELSRVL 414
>sp|Q54WR2|GCN1L_DICDI Translational activator gcn1 OS=Dictyostelium discoideum GN=gcn1l1
PE=3 SV=1
Length = 2667
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 368 RKCSAAALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGL 427
R+ SA L + + D ILP ++P+++ L + +E R+ + L + L
Sbjct: 1944 RQISAKTLGDIVSKLSDRILPEILPILERGLRSELEET---RQGVCIGLSEVISSAKTQL 2000
Query: 428 YPHLSEVI 435
P+LS V+
Sbjct: 2001 LPYLSSVV 2008
>sp|A9QM74|IMA8_HUMAN Importin subunit alpha-8 OS=Homo sapiens GN=KPNA7 PE=1 SV=1
Length = 516
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 20/169 (11%)
Query: 88 PSNQQYIKSELLPCL----GAADRHIRSTVGTIVSVVVQLGGIAGWLELLQALVTCLDSN 143
P +++KS L PCL A +I S VV+ G I Q L+ L S+
Sbjct: 116 PRMVEFLKSSLYPCLQFEAAWALTNIASGTSEQTRAVVEGGAI-------QPLIELLSSS 168
Query: 144 DINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLLQFFQS--PHTSLRKLSL 201
++ E A+ AL I D P+ D+ + A +P LL P T LR ++
Sbjct: 169 NVAVCEQAVWALGNIAGDGPEFRDNVITSNA-------IPHLLALISPTLPITFLRNITW 221
Query: 202 GSVNQFIMLMPSALFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFNLLIE 250
N P ++ Q L L L +EV C A + L +
Sbjct: 222 TLSNLCRNKNPYPCDTAVKQILPALLHLLQHQDSEVLSDACWALSYLTD 270
>sp|Q54EW3|IPO5_DICDI Probable importin-5 homolog OS=Dictyostelium discoideum
GN=DDB_G0291650 PE=3 SV=1
Length = 1067
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 144/362 (39%), Gaps = 52/362 (14%)
Query: 84 KSMSPSNQQYIKSELLPCLGAADR-HIRSTVGTIVSVV-VQLGGIAGWLELLQALVTCLD 141
K + P +K+EL+ + + HIR ++ +++++ +QL W E+L ++
Sbjct: 77 KGLKPETLVTLKTELMFAVREEPKNHIRHSILNVIAILAIQLVPEQKWPEILSFIIESSS 136
Query: 142 SNDINHMEGAMDALSKICEDIPQVLDSDVPGLAECPINIFLPRLLQFFQSPHTSLRKLSL 201
S + N E + + I +D +V ++ P + F + + P ++ +L
Sbjct: 137 SPEENLRESSFYLIGAIIDD-SRVAETLAPHFDK-----FALLVEKGLNDPSAKVQVSAL 190
Query: 202 GSVNQFIMLMPSA------LFVSMDQYLQGLFLLSNDPSAEVRKLVCAAFNLLIEVRPSF 255
+V+ FI P L +M +Q + ++ E +K + F ++ + +
Sbjct: 191 ETVSTFIDANPEKAEVFKPLIPAMLNTIQKT--IESNLEKEAQKGILT-FIIIAQYHSDW 247
Query: 256 LEPHLRNLFEYMLQV--NKDTDDDVALEACEFWHSYFEAQLPHENLKEFLPRLVPVLLSN 313
+ + +F+ Q ++ +D+ F+ ++ E + K +L +V +LL
Sbjct: 248 FKTNFDMIFKVFFQFLEHQSLEDETKHACLHFFLTFAEFKSSIMKKKLYLEPIVLLLLKW 307
Query: 314 MIYADDDESLVEAEEDESLPDRDQDLKPRFHSSRLHGSENPEDDDDDIVNVWNLRKCSAA 373
M + ED L D + P DDDD V + S
Sbjct: 308 M----------SSVEDMDLKDWNS------------LDTEPSDDDDSNVAFEAIEALSHC 345
Query: 374 ALDVLSNVFGDEILPTLMPVIQAKLSASGDEAWKDREAAVLALGAIAEGCIKGLYPHLSE 433
L F + PTL+ SG+ WK+R ++ L +I+EGC K + +
Sbjct: 346 VSKGLWEFFL-QCAPTLL--------NSGN--WKERYTGLMTLSSISEGCEKQIKTNFKL 394
Query: 434 VI 435
+I
Sbjct: 395 II 396
>sp|Q9ZKF8|SYFB_HELPJ Phenylalanine--tRNA ligase beta subunit OS=Helicobacter pylori
(strain J99) GN=pheT PE=3 SV=1
Length = 764
Score = 32.3 bits (72), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 140 LDSNDINHMEGAMDALSKICEDIPQV---LDSDVPGLAECPINIFLPRLLQFFQSPHTSL 196
L ND+N ++K+CED+ ++ ++S +P +A P N+ + ++L+ ++PH +
Sbjct: 3 LSVNDLNVFVNTPKDIAKLCEDLSRLGLEVESCIPCIA--PKNVVVGKVLE--KAPHKNA 58
Query: 197 RKLSLGSVNQFIMLMP 212
KLS+ V+ ++P
Sbjct: 59 EKLSVCQVDVGKEVLP 74
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,434,231
Number of Sequences: 539616
Number of extensions: 6591925
Number of successful extensions: 21095
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 20853
Number of HSP's gapped (non-prelim): 205
length of query: 438
length of database: 191,569,459
effective HSP length: 120
effective length of query: 318
effective length of database: 126,815,539
effective search space: 40327341402
effective search space used: 40327341402
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)