Query 013669
Match_columns 438
No_of_seqs 416 out of 3495
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 14:53:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013669.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013669hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kh5_A Protein MJ1225; AMPK, A 100.0 1E-32 3.6E-37 263.2 25.7 253 56-416 19-279 (280)
2 3t4n_C Nuclear protein SNF4; C 100.0 7.3E-33 2.5E-37 270.5 23.5 287 37-419 23-321 (323)
3 3ddj_A CBS domain-containing p 100.0 7.5E-32 2.6E-36 260.1 18.5 261 41-418 17-285 (296)
4 2qrd_G Protein C1556.08C; AMPK 100.0 2.4E-30 8.1E-35 253.8 27.7 290 35-420 13-317 (334)
5 2v8q_E 5'-AMP-activated protei 100.0 1.1E-30 3.7E-35 255.9 23.9 295 33-419 24-324 (330)
6 2yzq_A Putative uncharacterize 100.0 1.8E-30 6.1E-35 248.3 18.2 236 57-419 17-280 (282)
7 3ddj_A CBS domain-containing p 99.9 4.9E-24 1.7E-28 205.2 17.0 194 193-417 16-213 (296)
8 3kh5_A Protein MJ1225; AMPK, A 99.9 1.8E-23 6.2E-28 199.1 20.3 186 209-418 12-205 (280)
9 3t4n_C Nuclear protein SNF4; C 99.9 4.8E-23 1.6E-27 200.8 14.9 207 195-418 28-248 (323)
10 2yzq_A Putative uncharacterize 99.9 2.8E-22 9.6E-27 191.2 13.7 177 198-413 2-179 (282)
11 2qrd_G Protein C1556.08C; AMPK 99.9 3.9E-21 1.3E-25 188.1 18.1 206 197-418 22-243 (334)
12 2v8q_E 5'-AMP-activated protei 99.9 3.1E-21 1.1E-25 188.6 17.2 205 195-418 33-251 (330)
13 4esy_A CBS domain containing m 99.8 4.1E-20 1.4E-24 163.3 10.3 129 271-419 16-163 (170)
14 3lhh_A CBS domain protein; str 99.8 5.9E-19 2E-23 156.2 14.3 129 270-423 39-169 (172)
15 3k6e_A CBS domain protein; str 99.8 3E-19 1E-23 155.6 8.8 128 272-419 14-143 (156)
16 3i8n_A Uncharacterized protein 99.8 1.6E-18 5.6E-23 145.8 12.9 125 271-419 4-130 (130)
17 3l2b_A Probable manganase-depe 99.8 3.8E-18 1.3E-22 159.7 15.5 190 197-416 7-242 (245)
18 3hf7_A Uncharacterized CBS-dom 99.8 1.9E-18 6.5E-23 145.6 11.7 125 274-419 3-128 (130)
19 3nqr_A Magnesium and cobalt ef 99.8 1.1E-18 3.9E-23 146.2 10.0 123 273-419 3-127 (127)
20 3lv9_A Putative transporter; C 99.8 5.1E-18 1.8E-22 146.0 13.5 125 270-419 20-146 (148)
21 3lfr_A Putative metal ION tran 99.8 8.7E-19 3E-23 148.8 8.5 129 273-424 3-133 (136)
22 3jtf_A Magnesium and cobalt ef 99.7 3.5E-18 1.2E-22 143.7 10.3 124 271-419 3-127 (129)
23 4esy_A CBS domain containing m 99.7 1.1E-18 3.9E-23 153.9 7.7 130 196-337 17-162 (170)
24 3kpb_A Uncharacterized protein 99.7 1.2E-17 4.1E-22 138.5 11.8 119 274-418 2-120 (122)
25 3oco_A Hemolysin-like protein 99.7 3.5E-18 1.2E-22 148.0 8.8 130 271-424 18-149 (153)
26 2nyc_A Nuclear protein SNF4; b 99.7 6.4E-17 2.2E-21 137.9 15.9 137 271-419 6-142 (144)
27 2p9m_A Hypothetical protein MJ 99.7 4.8E-17 1.7E-21 137.8 14.7 125 271-418 6-136 (138)
28 2ef7_A Hypothetical protein ST 99.7 5.6E-17 1.9E-21 136.6 14.9 123 272-418 3-125 (133)
29 3ocm_A Putative membrane prote 99.7 2.3E-17 8E-22 146.1 12.5 131 271-426 34-165 (173)
30 3gby_A Uncharacterized protein 99.7 2.3E-17 7.9E-22 138.3 11.5 124 271-418 3-126 (128)
31 2rih_A Conserved protein with 99.7 5.5E-17 1.9E-21 138.3 14.0 122 272-417 4-127 (141)
32 2yzi_A Hypothetical protein PH 99.7 1.1E-16 3.9E-21 135.6 15.5 125 271-419 5-130 (138)
33 3lv9_A Putative transporter; C 99.7 1.2E-16 4.2E-21 137.3 15.2 127 192-336 18-144 (148)
34 3fhm_A Uncharacterized protein 99.7 4.6E-17 1.6E-21 142.8 12.5 134 267-421 18-153 (165)
35 3k6e_A CBS domain protein; str 99.7 4.4E-17 1.5E-21 141.8 11.6 126 198-336 16-141 (156)
36 1vr9_A CBS domain protein/ACT 99.7 6.6E-17 2.3E-21 148.1 13.3 162 197-400 13-174 (213)
37 4gqw_A CBS domain-containing p 99.7 7E-17 2.4E-21 138.9 12.6 130 272-419 4-144 (152)
38 1pbj_A Hypothetical protein; s 99.7 1.1E-16 3.8E-21 133.1 13.4 117 282-418 6-122 (125)
39 1y5h_A Hypothetical protein RV 99.7 4.1E-17 1.4E-21 137.4 10.8 124 272-418 7-131 (133)
40 3kpb_A Uncharacterized protein 99.7 1.5E-16 5.3E-21 131.7 13.9 119 198-337 2-120 (122)
41 3lqn_A CBS domain protein; csg 99.7 5.3E-17 1.8E-21 139.8 11.2 129 270-418 12-143 (150)
42 3oi8_A Uncharacterized protein 99.7 3.7E-17 1.2E-21 142.2 9.6 118 271-413 36-155 (156)
43 2uv4_A 5'-AMP-activated protei 99.7 2E-16 6.8E-21 136.7 14.1 122 287-418 30-151 (152)
44 2o16_A Acetoin utilization pro 99.7 1.7E-16 5.8E-21 138.5 13.4 126 272-417 4-134 (160)
45 3kxr_A Magnesium transporter, 99.7 1.6E-16 5.4E-21 144.7 13.6 129 271-427 52-183 (205)
46 3ctu_A CBS domain protein; str 99.7 3.3E-17 1.1E-21 142.1 8.7 130 271-420 13-144 (156)
47 3hf7_A Uncharacterized CBS-dom 99.7 2.1E-16 7.1E-21 133.0 13.1 125 197-336 2-126 (130)
48 3fv6_A YQZB protein; CBS domai 99.7 3.1E-16 1.1E-20 136.6 14.5 128 271-418 15-144 (159)
49 2rc3_A CBS domain; in SITU pro 99.7 2.3E-16 7.9E-21 133.3 13.3 123 274-419 7-132 (135)
50 1o50_A CBS domain-containing p 99.7 4.1E-16 1.4E-20 135.5 15.1 128 271-419 14-154 (157)
51 3lhh_A CBS domain protein; str 99.7 3.8E-16 1.3E-20 138.0 15.0 128 192-337 37-164 (172)
52 2pfi_A Chloride channel protei 99.7 5.7E-16 2E-20 135.1 15.5 135 271-418 11-147 (164)
53 2ef7_A Hypothetical protein ST 99.7 5.4E-16 1.8E-20 130.5 14.6 122 196-336 3-124 (133)
54 3i8n_A Uncharacterized protein 99.7 1.4E-16 4.9E-21 133.8 10.9 126 194-336 3-128 (130)
55 3jtf_A Magnesium and cobalt ef 99.7 3.9E-16 1.3E-20 131.0 13.5 122 196-336 4-125 (129)
56 2emq_A Hypothetical conserved 99.7 3.8E-16 1.3E-20 135.4 13.7 131 270-420 8-141 (157)
57 3k2v_A Putative D-arabinose 5- 99.7 5.3E-16 1.8E-20 133.6 14.2 121 272-414 27-148 (149)
58 4fry_A Putative signal-transdu 99.7 4.3E-16 1.5E-20 135.2 13.6 128 273-422 7-139 (157)
59 3nqr_A Magnesium and cobalt ef 99.7 2.4E-16 8E-21 132.0 11.5 123 197-336 3-125 (127)
60 3oco_A Hemolysin-like protein 99.7 1.9E-16 6.5E-21 137.1 10.9 126 194-337 17-143 (153)
61 3sl7_A CBS domain-containing p 99.7 1.1E-16 3.8E-21 141.9 9.5 127 274-418 5-156 (180)
62 3lfr_A Putative metal ION tran 99.7 3.2E-16 1.1E-20 132.9 11.7 124 197-336 3-126 (136)
63 1pvm_A Conserved hypothetical 99.7 5.4E-16 1.8E-20 138.5 13.6 126 272-418 8-133 (184)
64 3gby_A Uncharacterized protein 99.7 3.4E-16 1.2E-20 131.1 11.5 122 196-336 4-125 (128)
65 3lqn_A CBS domain protein; csg 99.7 6.5E-16 2.2E-20 132.9 13.3 130 195-336 13-142 (150)
66 2yzi_A Hypothetical protein PH 99.7 1.5E-15 5.3E-20 128.6 15.4 125 194-337 4-129 (138)
67 2rih_A Conserved protein with 99.7 1.5E-15 5E-20 129.3 15.1 121 197-336 5-127 (141)
68 2j9l_A Chloride channel protei 99.7 3.2E-16 1.1E-20 139.6 11.4 129 271-418 9-165 (185)
69 1yav_A Hypothetical protein BS 99.7 5.2E-16 1.8E-20 135.0 11.8 130 270-419 11-143 (159)
70 2p9m_A Hypothetical protein MJ 99.7 9.7E-16 3.3E-20 129.7 13.1 125 194-336 5-135 (138)
71 3fhm_A Uncharacterized protein 99.7 1.2E-15 4.1E-20 133.7 14.0 133 191-337 18-150 (165)
72 1pbj_A Hypothetical protein; s 99.6 1.8E-15 6.3E-20 125.6 14.0 121 198-337 2-122 (125)
73 4gqw_A CBS domain-containing p 99.6 6E-16 2E-20 133.0 10.2 132 197-337 5-143 (152)
74 1vr9_A CBS domain protein/ACT 99.6 1E-15 3.4E-20 140.2 11.9 121 271-419 11-131 (213)
75 3k2v_A Putative D-arabinose 5- 99.6 2E-15 7E-20 129.9 13.0 121 197-333 28-148 (149)
76 2o16_A Acetoin utilization pro 99.6 2.1E-15 7.3E-20 131.5 13.3 128 197-336 5-134 (160)
77 3fv6_A YQZB protein; CBS domai 99.6 3.4E-15 1.1E-19 130.0 14.4 125 195-336 15-143 (159)
78 2emq_A Hypothetical conserved 99.6 4E-15 1.4E-19 128.9 14.1 131 194-336 8-138 (157)
79 1y5h_A Hypothetical protein RV 99.6 1.2E-15 4.3E-20 128.3 10.3 125 194-336 5-130 (133)
80 2rc3_A CBS domain; in SITU pro 99.6 7.7E-15 2.6E-19 123.8 14.8 125 198-337 7-131 (135)
81 1yav_A Hypothetical protein BS 99.6 2.7E-15 9.3E-20 130.5 12.4 131 194-336 11-141 (159)
82 3ctu_A CBS domain protein; str 99.6 1.5E-15 5E-20 131.7 10.3 127 197-336 15-141 (156)
83 2uv4_A 5'-AMP-activated protei 99.6 3.2E-15 1.1E-19 129.1 12.2 116 209-336 29-150 (152)
84 1pvm_A Conserved hypothetical 99.6 5.3E-15 1.8E-19 132.0 14.0 124 197-336 9-132 (184)
85 2nyc_A Nuclear protein SNF4; b 99.6 3.1E-15 1.1E-19 127.4 11.9 126 196-336 7-140 (144)
86 3oi8_A Uncharacterized protein 99.6 1.3E-15 4.6E-20 132.2 9.6 121 194-332 35-155 (156)
87 2pfi_A Chloride channel protei 99.6 5.9E-15 2E-19 128.6 13.7 130 194-336 10-146 (164)
88 3ocm_A Putative membrane prote 99.6 5E-15 1.7E-19 131.0 13.1 125 194-337 33-157 (173)
89 3sl7_A CBS domain-containing p 99.6 2.3E-15 8E-20 133.3 10.6 131 197-336 4-155 (180)
90 2yvy_A MGTE, Mg2+ transporter 99.6 4.1E-15 1.4E-19 141.8 12.8 131 271-429 133-268 (278)
91 2oux_A Magnesium transporter; 99.6 2E-15 6.7E-20 144.6 10.6 126 271-424 135-265 (286)
92 4fry_A Putative signal-transdu 99.6 1.1E-14 3.9E-19 126.1 13.3 128 197-338 7-136 (157)
93 3kxr_A Magnesium transporter, 99.6 1.3E-14 4.6E-19 131.9 14.2 122 193-337 50-174 (205)
94 1o50_A CBS domain-containing p 99.6 9.2E-15 3.1E-19 126.9 12.3 130 194-336 13-152 (157)
95 2j9l_A Chloride channel protei 99.6 1.5E-14 5.1E-19 128.7 13.6 136 194-337 8-165 (185)
96 2d4z_A Chloride channel protei 99.6 9.7E-15 3.3E-19 136.6 12.5 140 271-418 11-246 (250)
97 3l2b_A Probable manganase-depe 99.6 1.5E-14 5.1E-19 135.1 12.5 222 44-335 7-242 (245)
98 2d4z_A Chloride channel protei 99.6 2.7E-14 9.2E-19 133.5 13.0 134 195-336 11-245 (250)
99 3pc3_A CG1753, isoform A; CBS, 99.5 5.6E-14 1.9E-18 145.8 11.7 127 270-420 381-513 (527)
100 2oux_A Magnesium transporter; 99.5 1.1E-13 3.7E-18 132.4 12.4 122 192-336 132-258 (286)
101 2zy9_A Mg2+ transporter MGTE; 99.5 2.2E-13 7.4E-18 139.2 13.6 120 271-418 153-277 (473)
102 2yvy_A MGTE, Mg2+ transporter 99.5 3.5E-13 1.2E-17 128.4 14.2 121 194-337 132-257 (278)
103 3pc3_A CG1753, isoform A; CBS, 99.4 3.8E-13 1.3E-17 139.5 12.6 128 193-338 380-512 (527)
104 3org_A CMCLC; transporter, tra 99.4 3.7E-14 1.3E-18 150.0 3.5 129 272-419 452-626 (632)
105 3usb_A Inosine-5'-monophosphat 99.4 2.9E-12 9.9E-17 131.7 13.1 116 282-418 118-234 (511)
106 4fxs_A Inosine-5'-monophosphat 99.4 4.6E-13 1.6E-17 137.2 6.0 115 282-418 94-209 (496)
107 2zy9_A Mg2+ transporter MGTE; 99.3 4.3E-12 1.5E-16 129.6 13.0 122 192-336 150-276 (473)
108 3usb_A Inosine-5'-monophosphat 99.3 1.1E-11 3.8E-16 127.4 15.8 156 209-399 121-278 (511)
109 1me8_A Inosine-5'-monophosphat 99.3 1.5E-13 5.1E-18 141.4 0.4 116 283-418 103-221 (503)
110 3org_A CMCLC; transporter, tra 99.3 1.2E-12 4.1E-17 138.4 7.4 132 195-336 451-624 (632)
111 1zfj_A Inosine monophosphate d 99.3 7.3E-12 2.5E-16 128.8 12.6 115 282-418 95-211 (491)
112 1me8_A Inosine-5'-monophosphat 99.3 4.9E-13 1.7E-17 137.6 0.6 152 209-395 105-260 (503)
113 4avf_A Inosine-5'-monophosphat 99.3 5.6E-13 1.9E-17 136.5 -0.1 115 282-418 93-207 (490)
114 1vrd_A Inosine-5'-monophosphat 99.2 8.7E-13 3E-17 135.8 0.3 117 282-419 100-216 (494)
115 4af0_A Inosine-5'-monophosphat 99.2 9.8E-13 3.4E-17 132.1 0.0 110 287-418 147-258 (556)
116 1zfj_A Inosine monophosphate d 99.2 1E-10 3.5E-15 120.2 13.4 118 199-337 92-211 (491)
117 4fxs_A Inosine-5'-monophosphat 99.1 1.5E-11 5.2E-16 125.9 4.6 116 200-336 92-208 (496)
118 4avf_A Inosine-5'-monophosphat 99.1 1.2E-11 4.3E-16 126.5 2.9 117 199-337 90-207 (490)
119 1vrd_A Inosine-5'-monophosphat 99.1 2.4E-11 8.1E-16 125.0 3.1 119 199-338 97-216 (494)
120 1jcn_A Inosine monophosphate d 99.1 2.8E-12 9.4E-17 132.6 -5.0 123 274-418 109-233 (514)
121 3ghd_A A cystathionine beta-sy 99.1 4.4E-10 1.5E-14 83.4 8.2 65 287-355 1-65 (70)
122 2cu0_A Inosine-5'-monophosphat 99.0 2.3E-11 7.7E-16 124.8 0.2 110 282-417 98-207 (486)
123 4af0_A Inosine-5'-monophosphat 99.0 3.5E-11 1.2E-15 120.9 0.2 110 209-336 146-257 (556)
124 2cu0_A Inosine-5'-monophosphat 99.0 1.1E-10 3.7E-15 119.7 1.5 158 209-408 101-258 (486)
125 3ghd_A A cystathionine beta-sy 98.9 1.6E-09 5.6E-14 80.3 7.2 68 211-290 2-69 (70)
126 1jcn_A Inosine monophosphate d 98.9 9.3E-11 3.2E-15 121.1 -3.0 121 199-337 110-233 (514)
127 3fio_A A cystathionine beta-sy 98.7 8.4E-08 2.9E-12 70.5 8.2 65 287-355 1-65 (70)
128 3fio_A A cystathionine beta-sy 98.6 1.5E-07 5E-12 69.2 7.6 49 368-418 1-49 (70)
129 1tif_A IF3-N, translation init 39.6 41 0.0014 24.5 4.4 26 390-416 13-38 (78)
130 1svj_A Potassium-transporting 21.6 39 0.0013 28.0 1.9 35 378-414 121-155 (156)
No 1
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=100.00 E-value=1e-32 Score=263.23 Aligned_cols=253 Identities=20% Similarity=0.338 Sum_probs=207.8
Q ss_pred CCCCHHHHHHHHHHcCCccCceecCCCCCCCCcccceeEEeehhHHHHHHHHhhHHhhhhcccccccccccCCcccccch
Q 013669 56 RDTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGTGTVGALG 135 (438)
Q Consensus 56 ~~~sv~~A~~~l~~~~i~~~PV~d~~~~~~~~~~~~~iGiv~~~di~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 135 (438)
+++|+.+|+++|.+++++++||+|++. ++++|++|..||+.++.......
T Consensus 19 ~~~sl~~a~~~m~~~~~~~lpV~d~~~-------~~~~Givt~~di~~~~~~~~~~~----------------------- 68 (280)
T 3kh5_A 19 PTTTIRKALMTMNENKYRRLPVVNAGN-------NKVVGIITSMDIVDFMGGGSKYN----------------------- 68 (280)
T ss_dssp TTSBHHHHHHHHHHHCCCEEEEECTTT-------CBEEEEEEHHHHHHHTTTSGGGH-----------------------
T ss_pred CCCcHHHHHHHHHhCCCcEeeEEECCC-------CeEEEEEEHHHHHHHhcccchhh-----------------------
Confidence 499999999999999999999999744 69999999999998742211000
Q ss_pred hhhccCCCcchhhhhhHHHhhhhhhccccccccCCCCCccccccccchhhhhhhccCCCCCCchhhhccccCCCCceEEe
Q 013669 136 ALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRWAPFLPVA 215 (438)
Q Consensus 136 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~di~~~~~~~~~i~v~ 215 (438)
+ .......+++..+ ..+++++|. .+++++.
T Consensus 69 --------------~-------------------------~~~~~~~~~~~~~-------~~~v~~im~----~~~~~v~ 98 (280)
T 3kh5_A 69 --------------L-------------------------IREKHERNFLAAI-------NEPVREIME----ENVITLK 98 (280)
T ss_dssp --------------H-------------------------HHTTSTTCHHHHT-------TSBGGGTSB----CSCCCEE
T ss_pred --------------h-------------------------hhhccccchhHHh-------hhhHHHhcC----CCCEEEC
Confidence 0 0000111222111 356999998 6899999
Q ss_pred CCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCccccccCCCCCCCceEEcCCC
Q 013669 216 TDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMSSDEVITIQSNE 295 (438)
Q Consensus 216 ~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~l~l~~m~~~~vv~v~~~~ 295 (438)
+++++.+|+++|.+++++++||+|++ |+++|++|..|+++.+..... ...++.+ +|.+ ++.++.+++
T Consensus 99 ~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~-------~~~~v~~----~m~~-~~~~v~~~~ 165 (280)
T 3kh5_A 99 ENADIDEAIETFLTKNVGGAPIVNDE-NQLISLITERDVIRALLDKID-------ENEVIDD----YITR-DVIVATPGE 165 (280)
T ss_dssp TTCBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHGGGSC-------TTCBSGG----GCBC-SCCCBCTTC
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEcCC-CEEEEEEEHHHHHHHHhhcCC-------CCCCHHH----HhCC-CCeEECCCC
Confidence 99999999999999999999999987 899999999999998865421 2347888 7876 889999999
Q ss_pred cHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCcccc--------ccccCcHHHHhcccCCCCCCCCCCC
Q 013669 296 LILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFS--------NFRQLTVRDFMNAVVPTTPDSGKVN 367 (438)
Q Consensus 296 ~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~--------~~~~~~v~~~m~~~~~~~~~~~~~~ 367 (438)
++.++++.|.+++++++||++ +|+++|+||.+|++..+.....+. .....++.++|..
T Consensus 166 ~l~~~~~~~~~~~~~~~~Vv~--~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~------------ 231 (280)
T 3kh5_A 166 RLKDVARTMVRNGFRRLPVVS--EGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRMEEIMKR------------ 231 (280)
T ss_dssp BHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBHHHHSBS------------
T ss_pred cHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcHHHHhcC------------
Confidence 999999999999999999995 799999999999999876432111 1245689999985
Q ss_pred CCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHh
Q 013669 368 PPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCF 416 (438)
Q Consensus 368 ~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l 416 (438)
+++++++++++.+|++.|.+++++++||+|++| +++|+||.+||++++
T Consensus 232 ~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g-~~~Givt~~dil~~l 279 (280)
T 3kh5_A 232 DVITAKEGDKLKKIAEIMVTNDIGALPVVDENL-RIKGIITEKDVLKYF 279 (280)
T ss_dssp SCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTC-BEEEEEEHHHHGGGG
T ss_pred CCEEECCCCCHHHHHHHHHHCCCCEEEEECCCC-eEEEEEeHHHHHHhh
Confidence 889999999999999999999999999999987 999999999999876
No 2
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=100.00 E-value=7.3e-33 Score=270.48 Aligned_cols=287 Identities=14% Similarity=0.271 Sum_probs=218.0
Q ss_pred HHHHhccCCCccCCCCCCC-----CCCCHHHHHHHHHHcCCccCceecCCCCCCCCcccceeEEeehhHHHHHHHHhhHH
Q 013669 37 LTAAFARIPVLSFPNVPGG-----RDTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAEL 111 (438)
Q Consensus 37 ~~~~~~~~pvs~~p~~~~~-----~~~sv~~A~~~l~~~~i~~~PV~d~~~~~~~~~~~~~iGiv~~~di~~~~l~~~~~ 111 (438)
+..|+....++++..+... .++|+.+|++.|.+++++++||+|++. ++++|+++..|++..++.....
T Consensus 23 i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~-------~~lvGilt~~Dl~~~l~~~~~~ 95 (323)
T 3t4n_C 23 IRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKT-------SRFAGLLTTTDFINVIQYYFSN 95 (323)
T ss_dssp HHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTT-------TEEEEEECHHHHHHHHHHHHHC
T ss_pred HHHHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCC-------CeEEEEEEHHHHHHHHHHHHcC
Confidence 3445566666665553221 289999999999999999999999875 6999999999999886643321
Q ss_pred hhhhcccccccccccCCcccccchhhhccCCCcchhhhhhHHHhhhhhhccccccccCCCCCccccccccchhhhhhhcc
Q 013669 112 AAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQE 191 (438)
Q Consensus 112 ~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~ 191 (438)
... +..+
T Consensus 96 ~~~----------------------------------------------------------------------~~~l--- 102 (323)
T 3t4n_C 96 PDK----------------------------------------------------------------------FELV--- 102 (323)
T ss_dssp GGG----------------------------------------------------------------------GGGG---
T ss_pred cch----------------------------------------------------------------------hHHH---
Confidence 100 0000
Q ss_pred CCCCCCchhhhccc--cCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCC-----EEEEEeHHHHHHHhhcCCCC
Q 013669 192 EPFKSTTVRSIIKS--YRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPD-----IKNYITQSAVVQGLEGCKGR 264 (438)
Q Consensus 192 ~~~~~~~v~di~~~--~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~-----v~Giit~~Di~~~l~~~~~~ 264 (438)
+.+....+++++.. ....+++++.+++++.+|++.|.+++++++||+|++ +. ++|++|.+|+++++......
T Consensus 103 ~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~~~~~l~Givt~~di~~~l~~~~~~ 181 (323)
T 3t4n_C 103 DKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQD-EETHREIVVSVLTQYRILKFVALNCRE 181 (323)
T ss_dssp GGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEEC-TTTCCEEEEEEEEHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecC-CCCCccceEEEecHHHHHHHHHhcCCc
Confidence 00111123333311 112678999999999999999999999999999976 54 99999999999988644211
Q ss_pred CcccccccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCcccccc
Q 013669 265 DWFDIIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNF 344 (438)
Q Consensus 265 ~~~~~l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~ 344 (438)
..+...++++++. .|.+ +++++.+++++.++++.|.+++++++||+|+ +|+++|+||.+|++..+.... + ..
T Consensus 182 ---~~~~~~~v~~~~~-~m~~-~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~-~~~~~Giit~~dl~~~~~~~~-~-~~ 253 (323)
T 3t4n_C 182 ---THFLKIPIGDLNI-ITQD-NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE-NGYLINVYEAYDVLGLIKGGI-Y-ND 253 (323)
T ss_dssp ---GGGCCSBGGGTTC-SBCT-TCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEETTHHHHHHHTTH-H-HH
T ss_pred ---hhhhhCcHHHcCC-CCCC-CcEEECCCCcHHHHHHHHHHcCCCEEEEECC-CCeEEEEEeHHHHHHHHhhch-h-hh
Confidence 2335668888332 1665 8999999999999999999999999999997 799999999999999876432 1 12
Q ss_pred ccCcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 345 RQLTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 345 ~~~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
...++.++|..... ...++++|.+++++.+|+++|.+++++++||+|++| +++|+||.+||++++..+
T Consensus 254 ~~~~v~~~m~~~~~------~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~-~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 254 LSLSVGEALMRRSD------DFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVG-RLVGVLTLSDILKYILLG 321 (323)
T ss_dssp TTSBHHHHGGGSCT------TCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTS-BEEEEEEHHHHHHHHHHC
T ss_pred ccCCHHHHHhhccc------cCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCC-cEEEEEEHHHHHHHHHhc
Confidence 35689999985211 112689999999999999999999999999999888 999999999999999864
No 3
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.98 E-value=7.5e-32 Score=260.06 Aligned_cols=261 Identities=16% Similarity=0.243 Sum_probs=214.1
Q ss_pred hccCCCccCCCCC---CCCCCCHHHHHHHHHHcCCccCceecCCCCCCCCcccceeEEeehhHHHHHHHHhhHHhhhhcc
Q 013669 41 FARIPVLSFPNVP---GGRDTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFS 117 (438)
Q Consensus 41 ~~~~pvs~~p~~~---~~~~~sv~~A~~~l~~~~i~~~PV~d~~~~~~~~~~~~~iGiv~~~di~~~~l~~~~~~~~~~~ 117 (438)
+...+|+++...+ ..+++|+.+|++.|.+++++++||+| . +++|++|..||+.++......
T Consensus 17 ~~~~~V~dim~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d--~--------~l~GivT~~Di~~~~~~~~~~------ 80 (296)
T 3ddj_A 17 FQGMNIETLMIKNPPILSKEDRLGSAFKKINEGGIGRIIVAN--E--------KIEGLLTTRDLLSTVESYCKD------ 80 (296)
T ss_dssp TCCSSGGGTCEESCCEECTTSBHHHHHHHTTGGGCCEEEEES--S--------SEEEEEEHHHHHGGGTTCC--------
T ss_pred hcccCHHHhccCCCcEECCCccHHHHHHHHHHCCCceEEEEC--C--------eEEEEEeHHHHHHHhcccccc------
Confidence 3556666655421 12399999999999999999999999 4 999999999999763211000
Q ss_pred cccccccccCCcccccchhhhccCCCcchhhhhhHHHhhhhhhccccccccCCCCCccccccccchhhhhhhccCCCCCC
Q 013669 118 VGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKST 197 (438)
Q Consensus 118 ~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~ 197 (438)
.....+++.. ...
T Consensus 81 ------------------------------------------------------------~~~~~~~~~~-------~~~ 93 (296)
T 3ddj_A 81 ------------------------------------------------------------SCSQGDLYHI-------STT 93 (296)
T ss_dssp -------------------------------------------------------------CCHHHHHHH-------HTS
T ss_pred ------------------------------------------------------------cccchhhHHH-------hcc
Confidence 0011222221 134
Q ss_pred chhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCccc
Q 013669 198 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISD 277 (438)
Q Consensus 198 ~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~ 277 (438)
+++++|. .+++++.+++++.+|+++|.+++++++||+|++ ++++|++|..|+++.+.... ...++.+
T Consensus 94 ~v~~im~----~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-~~lvGivt~~dl~~~~~~~~--------~~~~v~~ 160 (296)
T 3ddj_A 94 PIIDYMT----PNPVTVYNTSDEFTAINIMVTRNFGSLPVVDIN-DKPVGIVTEREFLLLYKDLD--------EIFPVKV 160 (296)
T ss_dssp BGGGTSE----ESCCCEETTSCHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHGGGGGGSC--------CCCBHHH
T ss_pred cHHHhcc----CCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHhhhccc--------ccccHHH
Confidence 5899998 679999999999999999999999999999977 89999999999998775432 3457888
Q ss_pred cccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCcccc-----ccccCcHHHH
Q 013669 278 LGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFS-----NFRQLTVRDF 352 (438)
Q Consensus 278 l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~-----~~~~~~v~~~ 352 (438)
+|.+ +++++.+++++.++++.|.+++++++||+|+ +|+++|++|.+|++..+.. .+. .....++.++
T Consensus 161 ----~m~~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~--~~~~~~~~~~~~~~v~~~ 232 (296)
T 3ddj_A 161 ----FMST-KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDD-DNKVVGIVTVVNAIKQLAK--AVDKLDPDYFYGKVVKDV 232 (296)
T ss_dssp ----HSBC-SCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHH--HHHHTCTHHHHTCBHHHH
T ss_pred ----hhcC-CCeEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHHH--HHhhcChhhhcCcCHHHH
Confidence 7876 8999999999999999999999999999997 7999999999999988752 111 1235789999
Q ss_pred hcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 353 MNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 353 m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
|.. ++++|.+++++.+|+++|.+++++++||+|++| +++|+||++||++++..
T Consensus 233 m~~------------~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g-~~~Giit~~Dil~~l~~ 285 (296)
T 3ddj_A 233 MVT------------NLVTIDELASVNRAAAEMIVKRIGSLLILNKDN-TIRGIITERDLLIALHH 285 (296)
T ss_dssp SBC------------CCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTS-CEEEEEEHHHHHHHHHH
T ss_pred hCC------------CCeEECCCCcHHHHHHHHHHcCCCEEEEECCCC-eEEEEEcHHHHHHHHHH
Confidence 985 889999999999999999999999999999888 99999999999999985
No 4
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.97 E-value=2.4e-30 Score=253.84 Aligned_cols=290 Identities=18% Similarity=0.302 Sum_probs=220.0
Q ss_pred HHHHHHhccCCCccCCCCCC-----CCCCCHHHHHHHHHHcCCccCceecCCCCCCCCcccceeEEeehhHHHHHHHHhh
Q 013669 35 ETLTAAFARIPVLSFPNVPG-----GRDTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETA 109 (438)
Q Consensus 35 ~~~~~~~~~~pvs~~p~~~~-----~~~~sv~~A~~~l~~~~i~~~PV~d~~~~~~~~~~~~~iGiv~~~di~~~~l~~~ 109 (438)
+.+..|+...+++++..+.. ..++|+.+|++.|.+++++++||+|++. ++++|+|+..|++.++....
T Consensus 13 ~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~-------~~~vGiv~~~Dl~~~~~~~~ 85 (334)
T 2qrd_G 13 KEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEA-------NKFAGLLTMADFVNVIKYYY 85 (334)
T ss_dssp HHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTT-------TEEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCC-------CeEEEEEEHHHHHHHHHHHh
Confidence 34566778899999876421 2299999999999999999999999865 69999999999998765432
Q ss_pred HHhhhhcccccccccccCCcccccchhhhccCCCcchhhhhhHHHhhhhhhccccccccCCCCCccccccccchhhhhhh
Q 013669 110 ELAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVIL 189 (438)
Q Consensus 110 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~ 189 (438)
..... + +.+..+
T Consensus 86 ~~~~~-----------------------------~--------------------------------------~~~~~~- 97 (334)
T 2qrd_G 86 QSSSF-----------------------------P--------------------------------------EAIAEI- 97 (334)
T ss_dssp HHCSC-----------------------------G--------------------------------------GGGGGG-
T ss_pred hccCC-----------------------------c--------------------------------------cHHHHH-
Confidence 11000 0 000000
Q ss_pred ccCCCCCCch----hhhccccCCCCc--eEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCC----EEEEEeHHHHHHHhh
Q 013669 190 QEEPFKSTTV----RSIIKSYRWAPF--LPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPD----IKNYITQSAVVQGLE 259 (438)
Q Consensus 190 ~~~~~~~~~v----~di~~~~~~~~~--i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~----v~Giit~~Di~~~l~ 259 (438)
.......+ +++|. .++ +++.+++++.++++.|.+++++++||+|++.++ ++|++|..|+++++.
T Consensus 98 --~~~~~~~i~~~l~~im~----~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~ 171 (334)
T 2qrd_G 98 --DKFRLLGLREVERKIGA----IPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFIS 171 (334)
T ss_dssp --GSCBHHHHHHHHHHHTC----SCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHH
T ss_pred --hhhchhhHHHHHHhhcc----CCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHH
Confidence 00000112 23454 455 999999999999999999999999999976234 999999999999886
Q ss_pred cCCCCCcccccccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCc
Q 013669 260 GCKGRDWFDIIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPE 339 (438)
Q Consensus 260 ~~~~~~~~~~l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~ 339 (438)
... ... .+...+++++.. +|.+ +++++.+++++.++++.|.+++++++||+|+ +|+++|+||.+|++..+....
T Consensus 172 ~~~--~~~-~~~~~~v~~l~~-~m~~-~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~~~~ 245 (334)
T 2qrd_G 172 MNC--KET-AMLRVPLNQMTI-GTWS-NLATASMETKVYDVIKMLAEKNISAVPIVNS-EGTLLNVYESVDVMHLIQDGD 245 (334)
T ss_dssp HHC--GGG-GGCCCBGGGSSC-SBCS-SCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEETHHHHHHHTTSC
T ss_pred hhc--cch-hhhhCcHHHhCC-cccC-CceEECCCCcHHHHHHHHHHcCCcEEEEEcC-CCcEEEEEEHHHHHHHhhccc
Confidence 431 100 123456777432 3665 8899999999999999999999999999997 789999999999999876432
Q ss_pred cccccccCcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 340 LFSNFRQLTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 340 ~~~~~~~~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
+ .....++.++|...... ..++++|++++++.+|+++|.+++++++||+|++| +++|+||.+||++++..+
T Consensus 246 -~-~~~~~~v~~~m~~~~~~------~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g-~l~Giit~~dil~~~~~~ 316 (334)
T 2qrd_G 246 -Y-SNLDLSVGEALLKRPAN------FDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENL-KLEGILSLADILNYIIYD 316 (334)
T ss_dssp -G-GGGGSBHHHHHTTCCTT------CCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTC-BEEEEEEHHHHHHHHHSC
T ss_pred -c-ccccCcHHHHHhccccc------CCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCC-eEEEEEeHHHHHHHHHhc
Confidence 1 12356899999731000 02789999999999999999999999999999887 999999999999999864
Q ss_pred C
Q 013669 420 P 420 (438)
Q Consensus 420 ~ 420 (438)
.
T Consensus 317 ~ 317 (334)
T 2qrd_G 317 K 317 (334)
T ss_dssp C
T ss_pred c
Confidence 3
No 5
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.97 E-value=1.1e-30 Score=255.91 Aligned_cols=295 Identities=15% Similarity=0.234 Sum_probs=224.9
Q ss_pred HHHHHHHHhccCCCccCCCCCC-----CCCCCHHHHHHHHHHcCCccCceecCCCCCCCCcccceeEEeehhHHHHHHHH
Q 013669 33 LQETLTAAFARIPVLSFPNVPG-----GRDTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLE 107 (438)
Q Consensus 33 ~~~~~~~~~~~~pvs~~p~~~~-----~~~~sv~~A~~~l~~~~i~~~PV~d~~~~~~~~~~~~~iGiv~~~di~~~~l~ 107 (438)
..+.++.+|...+++++..+.. ..++|+.+|++.|.+++++++||+|++. ++++|+|+..|++..+..
T Consensus 24 ~~~~~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~-------~~~vGivt~~Dll~~l~~ 96 (330)
T 2v8q_E 24 NSSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKK-------QSFVGMLTITDFINILHR 96 (330)
T ss_dssp CSCHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTT-------TEEEEEEEHHHHHHHHHH
T ss_pred hhHHHHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCC-------CeEEEEEEHHHHHHHHHH
Confidence 3456888999999999884321 1299999999999999999999999875 589999999999987654
Q ss_pred hhHHhhhhcccccccccccCCcccccchhhhccCCCcchhhhhhHHHhhhhhhccccccccCCCCCccccccccchhhhh
Q 013669 108 TAELAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKV 187 (438)
Q Consensus 108 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 187 (438)
..+..... . +. ........+.
T Consensus 97 ~~~~~~~~-----------------------~------------------------------~~----l~~~~~~~~~-- 117 (330)
T 2v8q_E 97 YYKSALVQ-----------------------I------------------------------YE----LEEHKIETWR-- 117 (330)
T ss_dssp HHHHHTTT-----------------------C------------------------------CC----GGGCBHHHHH--
T ss_pred HHhccccc-----------------------h------------------------------hH----HhhccHHHHH--
Confidence 32111000 0 00 0000000010
Q ss_pred hhccCCCCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcC-CCCCEEEEEeHHHHHHHhhcCCCCCc
Q 013669 188 ILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEP-GTPDIKNYITQSAVVQGLEGCKGRDW 266 (438)
Q Consensus 188 l~~~~~~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~-~~~~v~Giit~~Di~~~l~~~~~~~~ 266 (438)
.+++++|. .+++++.+++++.+|+++|.+++++++||+|+ + |+++|++|..|+++++........
T Consensus 118 ---------~~~~~im~----~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~-~~~~Givt~~dl~~~~~~~~~~~~ 183 (330)
T 2v8q_E 118 ---------EVYLQDSF----KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPES-GNTLYILTHKRILKFLKLFITEFP 183 (330)
T ss_dssp ---------HHHSSSSC----CCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTT-CCEEEEECHHHHHHHHHHHSCSSS
T ss_pred ---------HHHhhccc----CCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCC-CcEEEEEcHHHHHHHHHHHhhccC
Confidence 12345666 77999999999999999999999999999997 5 899999999999998865322222
Q ss_pred ccccccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCcccccccc
Q 013669 267 FDIIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQ 346 (438)
Q Consensus 267 ~~~l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~ 346 (438)
...+...+++++. +|...+++++.+++++.++++.|.+++++++||+|+ +|+++|+||.+|++..+.... +. ...
T Consensus 184 ~~~~~~~~v~~~~--v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~~~l~Giit~~dl~~~~~~~~-~~-~~~ 258 (330)
T 2v8q_E 184 KPEFMSKSLEELQ--IGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDE-KGRVVDIYSKFDVINLAAEKT-YN-NLD 258 (330)
T ss_dssp CCGGGGSBHHHHT--CSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECT-TSBEEEEEEGGGTGGGGGSSC-CC-CCS
T ss_pred chhhhcCCHHHhc--ccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECC-CCcEEEEEEHHHHHHHHhccc-cc-ccc
Confidence 2233455666642 354137899999999999999999999999999997 799999999999998765432 11 125
Q ss_pred CcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 347 LTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 347 ~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
.++.++|..... ...+++++.+++++.+++++|.+++++++||+|++| +++|+||.+||++++..+
T Consensus 259 ~~v~~~~~~~~~------~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g-~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 259 VSVTKALQHRSH------YFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHD-VVKGIVSLSDILQALVLT 324 (330)
T ss_dssp SBHHHHGGGCCS------CCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTS-BEEEEEEHHHHHHHHHSS
T ss_pred CcHHHHHhcccc------ccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCC-cEEEEEeHHHHHHHHHhh
Confidence 689999952100 113889999999999999999999999999999988 999999999999998864
No 6
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.97 E-value=1.8e-30 Score=248.27 Aligned_cols=236 Identities=18% Similarity=0.261 Sum_probs=180.7
Q ss_pred CCCHHHHHHHHHHcCCccCceecCCCCCCCCcccceeEEeehhHHHHHHHHhhHHhhhhcccccccccccCCcccccchh
Q 013669 57 DTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGTGTVGALGA 136 (438)
Q Consensus 57 ~~sv~~A~~~l~~~~i~~~PV~d~~~~~~~~~~~~~iGiv~~~di~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 136 (438)
++|+.+|+++|.++++.++||+|++ ++++|+++..|++..+.
T Consensus 17 ~~~~~~a~~~~~~~~~~~~pV~d~~--------~~~~Giv~~~dl~~~~~------------------------------ 58 (282)
T 2yzq_A 17 PATRNYALELFKKYKVRSFPVVNKE--------GKLVGIISVKRILVNPD------------------------------ 58 (282)
T ss_dssp SCC------------CCEEEEECTT--------CCEEEEEESSCC-----------------------------------
T ss_pred CCcHHHHHHHHHHcCCCeEEEEcCC--------CcEEEEEEHHHHHhhhc------------------------------
Confidence 8899999999999999999999974 59999999999984310
Q ss_pred hhccCCCcchhhhhhHHHhhhhhhccccccccCCCCCccccccccchhhhhhhccCCCCCCchhhhccccCCCCceEEeC
Q 013669 137 LALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRWAPFLPVAT 216 (438)
Q Consensus 137 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~di~~~~~~~~~i~v~~ 216 (438)
..+++++|. .+++++.+
T Consensus 59 -----------------------------------------------------------~~~v~~~m~----~~~~~v~~ 75 (282)
T 2yzq_A 59 -----------------------------------------------------------EEQLAMLVK----RDVPVVKE 75 (282)
T ss_dssp ----------------------------------------------------------------CCCB----SCCCEEET
T ss_pred -----------------------------------------------------------cCCHHHHcC----CCCcEECC
Confidence 123667776 56899999
Q ss_pred CCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHH-HhhcCCCCCcccccccCCccccccCCCCCCCceEEcCCC
Q 013669 217 DDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQ-GLEGCKGRDWFDIIASQPISDLGLPFMSSDEVITIQSNE 295 (438)
Q Consensus 217 ~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~-~l~~~~~~~~~~~l~~~~v~~l~l~~m~~~~vv~v~~~~ 295 (438)
++++.+|++.|.+++++++||+|++ |+++|++|..|+++ ++.... .....++++ +|.. +++++.+++
T Consensus 76 ~~~l~~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~di~~~~~~~~~------~~~~~~v~~----~m~~-~~~~v~~~~ 143 (282)
T 2yzq_A 76 NDTLKKAAKLMLEYDYRRVVVVDSK-GKPVGILTVGDIIRRYFAKSE------KYKGVEIEP----YYQR-YVSIVWEGT 143 (282)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCS------GGGGCBSTT----TSBS-CCCCEETTS
T ss_pred CCcHHHHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHhccC------CcccCcHHH----HhCC-CCEEECCCC
Confidence 9999999999999999999999987 89999999999998 665320 113557788 7876 889999999
Q ss_pred cHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHH------HHhc------CC-----------cc----ccccccCc
Q 013669 296 LILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIR------HLLL------KP-----------EL----FSNFRQLT 348 (438)
Q Consensus 296 ~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~------~~l~------~~-----------~~----~~~~~~~~ 348 (438)
++.++++.|.+++++++||+|+ +|+++|++|.+|++ ..+. .+ .. .......+
T Consensus 144 ~l~~~~~~~~~~~~~~l~Vvd~-~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (282)
T 2yzq_A 144 PLKAALKALLLSNSMALPVVDS-EGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKP 222 (282)
T ss_dssp BHHHHHHHHHTCSSSEEEEECT-TSCEEEEEEGGGGGGCGGGCC--------------------------------CCCB
T ss_pred CHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhccCC
Confidence 9999999999999999999997 78999999999998 4432 00 00 01123568
Q ss_pred HHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 349 VRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 349 v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
+.++|++ +++++++++++.+|+++|.+++++++||+|++| +++|+||++||++++..+
T Consensus 223 v~~im~~------------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~-~lvGiit~~Dil~~~~~~ 280 (282)
T 2yzq_A 223 VAEIMTR------------DVIVATPHMTVHEVALKMAKYSIEQLPVIRGEG-DLIGLIRDFDLLKVLVKS 280 (282)
T ss_dssp GGGTCBS------------SCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTT-EEEEEEEHHHHGGGGCC-
T ss_pred HHHhcCC------------CCceeCCCCCHHHHHHHHHHcCcceeEEECCCC-CEEEEEeHHHHHHHHHhh
Confidence 8899985 899999999999999999999999999999887 999999999999988754
No 7
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.91 E-value=4.9e-24 Score=205.24 Aligned_cols=194 Identities=20% Similarity=0.292 Sum_probs=167.5
Q ss_pred CCCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCC----ccc
Q 013669 193 PFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRD----WFD 268 (438)
Q Consensus 193 ~~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~----~~~ 268 (438)
.....+|+++|. .+++++++++++.+|+++|.+++++++||+| ++++|++|..|+++.+....... .+-
T Consensus 16 ~~~~~~V~dim~----~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~~~~~~~~~~ 88 (296)
T 3ddj_A 16 YFQGMNIETLMI----KNPPILSKEDRLGSAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCKDSCSQGDLY 88 (296)
T ss_dssp TTCCSSGGGTCE----ESCCEECTTSBHHHHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC---CCHHHHH
T ss_pred hhcccCHHHhcc----CCCcEECCCccHHHHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhcccccccccchhhH
Confidence 355678999999 6799999999999999999999999999998 68999999999999875432110 011
Q ss_pred ccccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCc
Q 013669 269 IIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLT 348 (438)
Q Consensus 269 ~l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~ 348 (438)
.....++++ +|++ +++++.+++++.++++.|.+++++++||+|+ +|+++|++|.+|++..+... ....+
T Consensus 89 ~~~~~~v~~----im~~-~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~-~~~lvGivt~~dl~~~~~~~-----~~~~~ 157 (296)
T 3ddj_A 89 HISTTPIID----YMTP-NPVTVYNTSDEFTAINIMVTRNFGSLPVVDI-NDKPVGIVTEREFLLLYKDL-----DEIFP 157 (296)
T ss_dssp HHHTSBGGG----TSEE-SCCCEETTSCHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHGGGGGGS-----CCCCB
T ss_pred HHhcccHHH----hccC-CCEEEcCCCCHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHhhhcc-----ccccc
Confidence 123568888 7887 8899999999999999999999999999987 79999999999998876432 23458
Q ss_pred HHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 013669 349 VRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFI 417 (438)
Q Consensus 349 v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~ 417 (438)
+.++|.. +++++.+++++.++++.|.+++++++||+|++| +++|+||.+||++.+.
T Consensus 158 v~~~m~~------------~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~-~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 158 VKVFMST------------KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDN-KVVGIVTVVNAIKQLA 213 (296)
T ss_dssp HHHHSBC------------SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTS-CEEEEEEHHHHHHHHH
T ss_pred HHHhhcC------------CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCC-EEEEEEEHHHHHHHHH
Confidence 9999984 889999999999999999999999999999887 9999999999999876
No 8
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.91 E-value=1.8e-23 Score=199.06 Aligned_cols=186 Identities=23% Similarity=0.395 Sum_probs=158.3
Q ss_pred CCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCc--------ccccccCCcccccc
Q 013669 209 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDW--------FDIIASQPISDLGL 280 (438)
Q Consensus 209 ~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~--------~~~l~~~~v~~l~l 280 (438)
++++++++++|+.+|+++|.+++++++||+|+++++++|++|.+|+++++........ +......++++
T Consensus 12 ~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--- 88 (280)
T 3kh5_A 12 KKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINEPVRE--- 88 (280)
T ss_dssp SCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHTTSBGGG---
T ss_pred CCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHhhhhHHH---
Confidence 6799999999999999999999999999999734899999999999998753321111 11122568888
Q ss_pred CCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcccCCCC
Q 013669 281 PFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAVVPTT 360 (438)
Q Consensus 281 ~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~~~~~~ 360 (438)
+|.+ +++++.+++++.++++.|.+++++++||+|+ +|+++|++|.+|++..+..... ...++.++|..
T Consensus 89 -im~~-~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~----~~~~v~~~m~~----- 156 (280)
T 3kh5_A 89 -IMEE-NVITLKENADIDEAIETFLTKNVGGAPIVND-ENQLISLITERDVIRALLDKID----ENEVIDDYITR----- 156 (280)
T ss_dssp -TSBC-SCCCEETTCBHHHHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHHHHHGGGSC----TTCBSGGGCBC-----
T ss_pred -hcCC-CCEEECCCCCHHHHHHHHHhCCCCEEEEEcC-CCEEEEEEEHHHHHHHHhhcCC----CCCCHHHHhCC-----
Confidence 7887 8999999999999999999999999999997 8999999999999988753211 23478899974
Q ss_pred CCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 361 PDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 361 ~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
+++++++++++.++++.|.+++++++||+ ++| +++|+||.+||++.+..
T Consensus 157 -------~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~-~~~Givt~~dl~~~~~~ 205 (280)
T 3kh5_A 157 -------DVIVATPGERLKDVARTMVRNGFRRLPVV-SEG-RLVGIITSTDFIKLLGS 205 (280)
T ss_dssp -------SCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETT-EEEEEEEHHHHHHHHTS
T ss_pred -------CCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECC-EEEEEEEHHHHHHHHhh
Confidence 88999999999999999999999999999 556 99999999999998753
No 9
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.89 E-value=4.8e-23 Score=200.80 Aligned_cols=207 Identities=14% Similarity=0.228 Sum_probs=162.1
Q ss_pred CCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCC----CCccccc
Q 013669 195 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG----RDWFDII 270 (438)
Q Consensus 195 ~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~----~~~~~~l 270 (438)
...++.++|... .+++.++.++++.+|++.|.+++++++||+|++.++++|++|..|++.++..... ...+...
T Consensus 28 ~~~~~~d~m~~~--~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~~~~~~~~~l~~~ 105 (323)
T 3t4n_C 28 NSKTSYDVLPVS--YRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSNPDKFELVDKL 105 (323)
T ss_dssp HHSBHHHHSCSE--EEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHCGGGGGGGGGC
T ss_pred HhCchHhhCCCC--CcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHHcCcchhHHHHHH
Confidence 456799999844 6799999999999999999999999999999865699999999999987642210 0111111
Q ss_pred ccCCcccc--ccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCe-----EEEEEeHHHHHHHhcCCccccc
Q 013669 271 ASQPISDL--GLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKK-----IVGNVSIRDIRHLLLKPELFSN 343 (438)
Q Consensus 271 ~~~~v~~l--~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~-----lvGiIs~~Dl~~~l~~~~~~~~ 343 (438)
....+.++ ...+|.+ +++++.+++++.++++.|.+++++++||+++ ++. ++|++|.+|++..+........
T Consensus 106 ~~~~v~~i~~~~~~~~~-~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~~~~~~~~l~Givt~~di~~~l~~~~~~~~ 183 (323)
T 3t4n_C 106 QLDGLKDIERALGVDQL-DTASIHPSRPLFEACLKMLESRSGRIPLIDQ-DEETHREIVVSVLTQYRILKFVALNCRETH 183 (323)
T ss_dssp BHHHHHHHHHHTTC-----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEE-CTTTCCEEEEEEEEHHHHHHHHHHHCGGGG
T ss_pred HHHHHHHHHHHhCCCCC-CceEeCCCCcHHHHHHHHHhCCeeEEEEEec-CCCCCccceEEEecHHHHHHHHHhcCCchh
Confidence 11222221 0114555 7899999999999999999999999999997 554 9999999999988753211123
Q ss_pred cccCcHHHH---hcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 344 FRQLTVRDF---MNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 344 ~~~~~v~~~---m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
+...++.++ |.. +++++.+++++.+|++.|.+++++++||+|++| +++|+||.+||++.+..
T Consensus 184 ~~~~~v~~~~~~m~~------------~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~-~~~Giit~~dl~~~~~~ 248 (323)
T 3t4n_C 184 FLKIPIGDLNIITQD------------NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENG-YLINVYEAYDVLGLIKG 248 (323)
T ss_dssp GCCSBGGGTTCSBCT------------TCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTC-BEEEEEETTHHHHHHHT
T ss_pred hhhCcHHHcCCCCCC------------CcEEECCCCcHHHHHHHHHHcCCCEEEEECCCC-eEEEEEeHHHHHHHHhh
Confidence 345688898 653 889999999999999999999999999999988 99999999999998864
No 10
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.88 E-value=2.8e-22 Score=191.25 Aligned_cols=177 Identities=18% Similarity=0.313 Sum_probs=138.9
Q ss_pred chhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCccc
Q 013669 198 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISD 277 (438)
Q Consensus 198 ~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~ 277 (438)
+++++|. .+++++++++++.+|+++|.+++++++||+|++ |+++|++|..|+++.+. ..++++
T Consensus 2 ~v~~im~----~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~------------~~~v~~ 64 (282)
T 2yzq_A 2 RVKTIMT----QNPVTITLPATRNYALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPD------------EEQLAM 64 (282)
T ss_dssp BHHHHSE----ESCCCEESSCC------------CCEEEEECTT-CCEEEEEESSCC----------------------C
T ss_pred chHHhcc----CCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhc------------cCCHHH
Confidence 4788998 779999999999999999999999999999975 89999999999976432 357788
Q ss_pred cccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHH-HhcCCccccccccCcHHHHhccc
Q 013669 278 LGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRH-LLLKPELFSNFRQLTVRDFMNAV 356 (438)
Q Consensus 278 l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~-~l~~~~~~~~~~~~~v~~~m~~~ 356 (438)
+|.+ ++.++.+++++.++++.|.+++++++||+|+ +|+++|++|.+|++. .+..... ....++.++|..
T Consensus 65 ----~m~~-~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-~~~~~Giit~~di~~~~~~~~~~---~~~~~v~~~m~~- 134 (282)
T 2yzq_A 65 ----LVKR-DVPVVKENDTLKKAAKLMLEYDYRRVVVVDS-KGKPVGILTVGDIIRRYFAKSEK---YKGVEIEPYYQR- 134 (282)
T ss_dssp ----CCBS-CCCEEETTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHTTTTCSG---GGGCBSTTTSBS-
T ss_pred ----HcCC-CCcEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHHhccCC---cccCcHHHHhCC-
Confidence 7876 7899999999999999999999999999997 789999999999998 6653211 235578888874
Q ss_pred CCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHH
Q 013669 357 VPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVI 413 (438)
Q Consensus 357 ~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl 413 (438)
+++++.+++++.++++.|.+++++++||+|++| +++|+||.+|++
T Consensus 135 -----------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~-~~~Giit~~dl~ 179 (282)
T 2yzq_A 135 -----------YVSIVWEGTPLKAALKALLLSNSMALPVVDSEG-NLVGIVDETDLL 179 (282)
T ss_dssp -----------CCCCEETTSBHHHHHHHHHTCSSSEEEEECTTS-CEEEEEEGGGGG
T ss_pred -----------CCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCC-eEEEEEEHHHHh
Confidence 889999999999999999999999999999887 999999999999
No 11
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.86 E-value=3.9e-21 Score=188.12 Aligned_cols=206 Identities=14% Similarity=0.140 Sum_probs=159.1
Q ss_pred CchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCC----CCCccccccc
Q 013669 197 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCK----GRDWFDIIAS 272 (438)
Q Consensus 197 ~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~----~~~~~~~l~~ 272 (438)
.+++++|... .+++++++++++.+|++.|.+++++++||+|++.++++|++|.+|+++++.... ....+..+..
T Consensus 22 ~~v~dim~~~--~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~~~~~~~ 99 (334)
T 2qrd_G 22 RTSYDVLPTS--FRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPEAIAEIDK 99 (334)
T ss_dssp SBGGGGSCSE--EEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGGGGGGGGS
T ss_pred CchhhhCCCC--CCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCccHHHHHhh
Confidence 5699999733 568999999999999999999999999999976578999999999998764210 0111111223
Q ss_pred CCccccc---cCCCCCCCc--eEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCe----EEEEEeHHHHHHHhcCCccccc
Q 013669 273 QPISDLG---LPFMSSDEV--ITIQSNELILEAFKRMKDNNIGGIPVVEGQQKK----IVGNVSIRDIRHLLLKPELFSN 343 (438)
Q Consensus 273 ~~v~~l~---l~~m~~~~v--v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~----lvGiIs~~Dl~~~l~~~~~~~~ 343 (438)
.++..+. -.+|.. ++ +++.+++++.++++.|.+++++++||+|+.+++ ++|++|.+|++..+........
T Consensus 100 ~~~~~i~~~l~~im~~-~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~~~ 178 (334)
T 2qrd_G 100 FRLLGLREVERKIGAI-PPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKETA 178 (334)
T ss_dssp CBHHHHHHHHHHHTCS-CSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGGGG
T ss_pred hchhhHHHHHHhhccC-CCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccchh
Confidence 3333310 002443 45 899999999999999999999999999862234 9999999999987753110011
Q ss_pred cccCcHHHH---hcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 344 FRQLTVRDF---MNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 344 ~~~~~v~~~---m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
+...++.++ |.. +++++.+++++.++++.|.+++++++||+|++| +++|+||.+||++.+..
T Consensus 179 ~~~~~v~~l~~~m~~------------~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~-~~~Giit~~dl~~~~~~ 243 (334)
T 2qrd_G 179 MLRVPLNQMTIGTWS------------NLATASMETKVYDVIKMLAEKNISAVPIVNSEG-TLLNVYESVDVMHLIQD 243 (334)
T ss_dssp GCCCBGGGSSCSBCS------------SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTC-BEEEEEETHHHHHHHTT
T ss_pred hhhCcHHHhCCcccC------------CceEECCCCcHHHHHHHHHHcCCcEEEEEcCCC-cEEEEEEHHHHHHHhhc
Confidence 234578884 553 789999999999999999999999999999887 99999999999998765
No 12
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.86 E-value=3.1e-21 Score=188.60 Aligned_cols=205 Identities=13% Similarity=0.127 Sum_probs=160.7
Q ss_pred CCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCC--CCCccccccc
Q 013669 195 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCK--GRDWFDIIAS 272 (438)
Q Consensus 195 ~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~--~~~~~~~l~~ 272 (438)
...+++++|... .+++++++++++.+|++.|.+++++++||+|.+.++++|++|..|++..+.... .......+..
T Consensus 33 ~~~~v~dim~p~--~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l~~ 110 (330)
T 2v8q_E 33 KSHRCYDLIPTS--SKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEE 110 (330)
T ss_dssp HHSBGGGGSCSE--EEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCCGGG
T ss_pred HcCcHhhhccCC--CcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhHHhh
Confidence 345699999311 679999999999999999999999999999986468999999999998764321 0001111111
Q ss_pred CC-------ccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCc---ccc
Q 013669 273 QP-------ISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPE---LFS 342 (438)
Q Consensus 273 ~~-------v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~---~~~ 342 (438)
.+ +++ +|.+ +++++.+++++.++++.|.+++++++||+|+++|+++|++|.+|++..+.... ...
T Consensus 111 ~~~~~~~~~~~~----im~~-~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~~ 185 (330)
T 2v8q_E 111 HKIETWREVYLQ----DSFK-PLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKP 185 (330)
T ss_dssp CBHHHHHHHHSS----SSCC-CCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSCC
T ss_pred ccHHHHHHHHhh----cccC-CceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCch
Confidence 22 234 5776 89999999999999999999999999999852489999999999998764210 011
Q ss_pred ccccCcHHHH--hcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 343 NFRQLTVRDF--MNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 343 ~~~~~~v~~~--m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
.+...++.++ |.. .+++++.+++++.++++.|.+++++++||+|++| +++|+||.+||++.+..
T Consensus 186 ~~~~~~v~~~~v~~~-----------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~-~l~Giit~~dl~~~~~~ 251 (330)
T 2v8q_E 186 EFMSKSLEELQIGTY-----------ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKG-RVVDIYSKFDVINLAAE 251 (330)
T ss_dssp GGGGSBHHHHTCSBC-----------SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTS-BEEEEEEGGGTGGGGGS
T ss_pred hhhcCCHHHhcccCc-----------CCceEECCCCCHHHHHHHHHHcCCCeEEEECCCC-cEEEEEEHHHHHHHHhc
Confidence 2234566666 320 2789999999999999999999999999999887 99999999999998764
No 13
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.81 E-value=4.1e-20 Score=163.27 Aligned_cols=129 Identities=29% Similarity=0.476 Sum_probs=112.1
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCc-----------
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPE----------- 339 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~----------- 339 (438)
...++++ +|++ +++++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+|+++.+....
T Consensus 16 ~~~~V~d----iM~~-~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~ 89 (170)
T 4esy_A 16 RQVPIRD----ILTS-PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ-NGHLVGIITESDFLRGSIPFWIYEASEILSRA 89 (170)
T ss_dssp HTSBGGG----GCCS-CCCCEETTSBHHHHHHHHHHTTCSEEEEECT-TSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTT
T ss_pred cCCCHHH----hcCC-CCcEECCcCcHHHHHHHHHHcCCeEEEEEcC-CccEEEEEEHHHHHHHHhhccccchhhhhhhc
Confidence 4568999 8987 8999999999999999999999999999998 899999999999976543211
Q ss_pred --------cccccccCcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHH
Q 013669 340 --------LFSNFRQLTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRD 411 (438)
Q Consensus 340 --------~~~~~~~~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~D 411 (438)
.+......++.++|++ ++++|++++++.+|+++|.+++++++||+|+ | +++|+||++|
T Consensus 90 ~~~~~~~~~~~~~~~~~v~~im~~------------~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~-g-~lvGivt~~D 155 (170)
T 4esy_A 90 IPAPEVEHLFETGRKLTASAVMTQ------------PVVTAAPEDSVGSIADQMRRHGIHRIPVVQD-G-VPVGIVTRRD 155 (170)
T ss_dssp SCHHHHHHHHHHHTTCBHHHHCBC------------CSCCBCTTSBHHHHHHHHHHTTCSEEEEEET-T-EEEEEEEHHH
T ss_pred cchhhHHhhhccccccchhhhccc------------CcccCCcchhHHHHHHHHHHcCCcEEEEEEC-C-EEEEEEEHHH
Confidence 1112345689999985 8999999999999999999999999999984 5 9999999999
Q ss_pred HHHHhhcC
Q 013669 412 VISCFIFE 419 (438)
Q Consensus 412 Il~~l~~e 419 (438)
|+++++.+
T Consensus 156 il~~l~~~ 163 (170)
T 4esy_A 156 LLKLLLLE 163 (170)
T ss_dssp HTTTSCCC
T ss_pred HHHHHHhc
Confidence 99998754
No 14
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.80 E-value=5.9e-19 Score=156.22 Aligned_cols=129 Identities=14% Similarity=0.233 Sum_probs=111.2
Q ss_pred cccCCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCC-CeEEEEEeHHHHHHHhcCCccccccccC
Q 013669 270 IASQPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQ-KKIVGNVSIRDIRHLLLKPELFSNFRQL 347 (438)
Q Consensus 270 l~~~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~-~~lvGiIs~~Dl~~~l~~~~~~~~~~~~ 347 (438)
+...++++ +|++ .+++++.+++++.+|++.|.+++++++||+++ + ++++|+||.+|++..+... ...
T Consensus 39 l~~~~v~d----iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~-~~~~lvGivt~~dl~~~~~~~------~~~ 107 (172)
T 3lhh_A 39 LDERTISS----LMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRN-NVDDMVGIISAKQLLSESIAG------ERL 107 (172)
T ss_dssp ----CTTT----TSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESS-STTSEEEEEEHHHHHHHHHTT------CCC
T ss_pred cCCCCHHH----hCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeC-CCCeEEEEEEHHHHHHHHhhc------Ccc
Confidence 35668888 7883 27899999999999999999999999999997 5 8999999999999887542 146
Q ss_pred cHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcCCCCc
Q 013669 348 TVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFEPPNH 423 (438)
Q Consensus 348 ~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e~~~~ 423 (438)
++.++| . +++++.+++++.+|+++|.+++++++||+|++| +++|+||++||++.+..+..+.
T Consensus 108 ~v~~im-~------------~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g-~lvGiit~~Dil~~l~~~~~de 169 (172)
T 3lhh_A 108 ELVDLV-K------------NCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYG-DLKGLVTLQDMMDALTGEFFQE 169 (172)
T ss_dssp CGGGGC-B------------CCEEEETTCCHHHHHHHHHHHTCSEEEEECTTS-CEEEEEEHHHHHHHHHTTCC--
T ss_pred cHHHHh-c------------CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCC-CEEEEeeHHHHHHHHhCCCccc
Confidence 899999 5 889999999999999999999999999999988 9999999999999999765443
No 15
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.78 E-value=3e-19 Score=155.60 Aligned_cols=128 Identities=18% Similarity=0.250 Sum_probs=108.7
Q ss_pred cCCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCcc-ccccccCcH
Q 013669 272 SQPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPEL-FSNFRQLTV 349 (438)
Q Consensus 272 ~~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~-~~~~~~~~v 349 (438)
..++++ +|.+ ++++++.+++++.+|+++|.+++++++||+|+ +|+++|+||.+|++..+..... ...+...++
T Consensus 14 ~~~~~~----iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~-~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v 88 (156)
T 3k6e_A 14 LGQEET----FLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-EKQFVGTIGLRDIMAYQMEHDLSQEIMADTDI 88 (156)
T ss_dssp HTTGGG----GEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBG
T ss_pred hccHHH----hCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC-CCcEEEEEEecchhhhhhhcccccccccccCH
Confidence 346677 7775 47899999999999999999999999999997 7999999999999887654322 123346789
Q ss_pred HHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 350 RDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 350 ~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
.++|.+ +++++++++++.+|+++|.+++ .+||||++| +++|+||++||++++...
T Consensus 89 ~~im~~------------~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g-~l~GiiT~~Dil~~~~~~ 143 (156)
T 3k6e_A 89 VHMTKT------------DVAVVSPDFTITEVLHKLVDES--FLPVVDAEG-IFQGIITRKSILKAVNAL 143 (156)
T ss_dssp GGTCBC------------SCCCBCTTCCHHHHHHHTTTSS--EEEEECTTS-BEEEEEEHHHHHHHHHHH
T ss_pred HHhhcC------------CceecccccHHHHHHHHHHHcC--CeEEEecCC-EEEEEEEHHHHHHHHHHH
Confidence 999985 8999999999999999999875 499999998 999999999999998653
No 16
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.78 E-value=1.6e-18 Score=145.82 Aligned_cols=125 Identities=20% Similarity=0.273 Sum_probs=109.1
Q ss_pred ccCCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCC-CeEEEEEeHHHHHHHhcCCccccccccCc
Q 013669 271 ASQPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQ-KKIVGNVSIRDIRHLLLKPELFSNFRQLT 348 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~-~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~ 348 (438)
...++++ +|++ ..++++.+++++.+|++.|.+++++++||+++ + |+++|+||.+|++..+.... ...+
T Consensus 4 ~~~~v~~----iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-~~~~~~Givt~~dl~~~~~~~~-----~~~~ 73 (130)
T 3i8n_A 4 QDVPVTQ----VMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSE-QKDNIIGFVHRLELFKMQQSGS-----GQKQ 73 (130)
T ss_dssp ---CCTT----TSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESS-STTCEEEECCHHHHHHHHHTTT-----TTSB
T ss_pred CcCCHhh----CCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeC-CCCcEEEEEEHHHHHHHHhcCC-----CcCC
Confidence 5568888 7875 25679999999999999999999999999997 5 89999999999998875432 2568
Q ss_pred HHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 349 VRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 349 v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
+.++|. +++++.+++++.+|++.|.+++++++||+|++| +++|+||++||++.+..|
T Consensus 74 v~~~m~-------------~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g-~~vGivt~~dil~~l~ge 130 (130)
T 3i8n_A 74 LGAVMR-------------PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYG-TVLGLVTLEDIFEHLVGE 130 (130)
T ss_dssp HHHHSE-------------ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTS-CEEEEEEHHHHHHHHHTC
T ss_pred HHHHhc-------------CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCC-CEEEEEEHHHHHHHHcCC
Confidence 999995 678999999999999999999999999999988 999999999999998753
No 17
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.77 E-value=3.8e-18 Score=159.71 Aligned_cols=190 Identities=13% Similarity=0.197 Sum_probs=137.4
Q ss_pred CchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCccc--------
Q 013669 197 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFD-------- 268 (438)
Q Consensus 197 ~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~-------- 268 (438)
.+|+++|. .+++++.+++++.+|+++|.+++++++||+|++ |+++|++|..|+++.+........+.
T Consensus 7 ~~v~~im~----~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3l2b_A 7 LKVEDLEM----DKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDSNILAKSATSLDN 81 (245)
T ss_dssp CBGGGSCC----BCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHH
T ss_pred CcHHHhcC----CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHH
Confidence 56999998 779999999999999999999999999999987 89999999999999886432111000
Q ss_pred --------------------------ccccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCC----
Q 013669 269 --------------------------IIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQ---- 318 (438)
Q Consensus 269 --------------------------~l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~---- 318 (438)
.+....+.+ ++.+..++.+. + -.++...+.+.+++++++++..
T Consensus 82 v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~----~~~~~~ivIvg-d--r~~~~~~~i~~~~~~liit~~~~~~~ 154 (245)
T 3l2b_A 82 ILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKE----FISEGDIAIAG-D--RAEIQAELIELKVSLLIVTGGHTPSK 154 (245)
T ss_dssp HHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGG----TCCTTCEEEEC-S--CHHHHHHHHHTTCSEEEECTTCCCCH
T ss_pred HHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHh----cCCCCCEEEEC-C--CHHHHHHHHHcCCCEEEECCCCCCCH
Confidence 000111222 33443444442 2 3688888999999999888531
Q ss_pred -------CCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhc-ccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCC
Q 013669 319 -------QKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMN-AVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSV 390 (438)
Q Consensus 319 -------~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~-~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i 390 (438)
++.+..+.+..|....... . ....++.++|+ . +++++++++++.+++++|.++++
T Consensus 155 ~v~~~a~~~~~~~i~t~~d~~~~~~~--~---~~~~~v~~im~~~------------~~~~~~~~~~~~~~~~~m~~~~~ 217 (245)
T 3l2b_A 155 EIIELAKKNNITVITTPHDSFTASRL--I---VQSLPVDYVMTKD------------NLVAVSTDDLVEDVKVTMSETRY 217 (245)
T ss_dssp HHHHHHHHHTCEEEECSSCHHHHHHH--G---GGGSBHHHHSBCT------------TCCCEETTSBHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCeEEEeCCChHHHHHH--H---hcCCceeeEecCC------------ccEEECCCCcHHHHHHHHHhcCC
Confidence 1123455666665443221 1 13568999998 4 88999999999999999999999
Q ss_pred CEEEEEeCCCCeEEEEEeHHHHHHHh
Q 013669 391 HRIYVVAGEEAEVVGVITLRDVISCF 416 (438)
Q Consensus 391 ~~l~VVd~~g~~lvGvIT~~DIl~~l 416 (438)
+++||+|++| +++|+||.+||+++.
T Consensus 218 ~~~pVvd~~~-~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 218 SNYPVIDENN-KVVGSIARFHLISTH 242 (245)
T ss_dssp SEEEEECTTC-BEEEEEECC------
T ss_pred ceEEEEcCCC-eEEEEEEHHHhhchh
Confidence 9999999987 999999999999864
No 18
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.77 E-value=1.9e-18 Score=145.61 Aligned_cols=125 Identities=13% Similarity=0.220 Sum_probs=108.3
Q ss_pred CccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHH
Q 013669 274 PISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDF 352 (438)
Q Consensus 274 ~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~ 352 (438)
++++ +|++ .+++++.+++++.+|++.|.+++++++||+++++++++|++|.+|++..+..... +...++.++
T Consensus 3 ~v~~----iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~---~~~~~v~~~ 75 (130)
T 3hf7_A 3 SVND----IMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKE---FTKEIMLRA 75 (130)
T ss_dssp BHHH----HSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSC---CCHHHHHHH
T ss_pred CHHH----hCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCc---cchhhHHHh
Confidence 4666 6864 3689999999999999999999999999997535899999999999998765332 234578999
Q ss_pred hcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 353 MNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 353 m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
|. +++++.+++++.+|++.|.+++++++||+|++| +++|+||.+||++.+..+
T Consensus 76 m~-------------~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g-~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 76 AD-------------EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYG-DIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp SB-------------CCCEEETTCBHHHHHHHHHHHCCCEEEEECTTS-CEEEEEEHHHHHHHHHC-
T ss_pred cc-------------CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCC-CEEEEeeHHHHHHHHhCC
Confidence 85 789999999999999999999999999999988 999999999999999864
No 19
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.77 E-value=1.1e-18 Score=146.17 Aligned_cols=123 Identities=16% Similarity=0.329 Sum_probs=106.5
Q ss_pred CCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCC-CeEEEEEeHHHHHHHhcCCccccccccCcHH
Q 013669 273 QPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQ-KKIVGNVSIRDIRHLLLKPELFSNFRQLTVR 350 (438)
Q Consensus 273 ~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~-~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~ 350 (438)
.++++ +|++ .+++++.+++++.++++.|.+++++++||+++ + |+++|+||.+|++..+.... ...++.
T Consensus 3 ~~v~d----iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-~~~~~vGivt~~dl~~~~~~~~-----~~~~v~ 72 (127)
T 3nqr_A 3 QRVRD----IMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISE-DKDHIEGILMAKDLLPFMRSDA-----EAFSMD 72 (127)
T ss_dssp CBHHH----HSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS-STTCEEEEEEGGGGGGGGSTTC-----CCCCHH
T ss_pred cCHHH----hcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcC-CCCcEEEEEEHHHHHHHHhccC-----CCCCHH
Confidence 45677 6875 24899999999999999999999999999997 5 89999999999988764321 356899
Q ss_pred HHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 351 DFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 351 ~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
++|. +++++.+++++.+|+++|.+++++++||+|++| +++|+||++||++.+..|
T Consensus 73 ~~m~-------------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g-~~~Giit~~dll~~l~ge 127 (127)
T 3nqr_A 73 KVLR-------------TAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFG-GVSGLVTIEDILELIVGE 127 (127)
T ss_dssp HHCB-------------CCCEEETTCBHHHHHHHHHHTTCCEEEEECTTS-CEEEEEEHHHHHHHC---
T ss_pred HHcC-------------CCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCC-CEEEEEEHHHHHHHHhCC
Confidence 9996 578999999999999999999999999999988 999999999999998753
No 20
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.76 E-value=5.1e-18 Score=146.04 Aligned_cols=125 Identities=17% Similarity=0.311 Sum_probs=111.7
Q ss_pred cccCCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCC-CeEEEEEeHHHHHHHhcCCccccccccC
Q 013669 270 IASQPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQ-KKIVGNVSIRDIRHLLLKPELFSNFRQL 347 (438)
Q Consensus 270 l~~~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~-~~lvGiIs~~Dl~~~l~~~~~~~~~~~~ 347 (438)
+...++++ +|++ .+++++.+++++.++++.|.+++++++||+|+ + |+++|+||.+|++..+.... ..
T Consensus 20 l~~~~v~d----iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-~~~~lvGivt~~dl~~~~~~~~------~~ 88 (148)
T 3lv9_A 20 FEEKKIRE----IMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRK-NKDDILGFVHIRDLYNQKINEN------KI 88 (148)
T ss_dssp GGTCBGGG----TSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESS-STTSEEEEEEHHHHHHHHHHHS------CC
T ss_pred cCCCCHHH----ccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC-CCCcEEEEEEHHHHHHHHhcCC------Cc
Confidence 35678999 7874 36889999999999999999999999999997 5 89999999999998865321 46
Q ss_pred cHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 348 TVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 348 ~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
++.++| . +++++++++++.+|+++|.+++++++||+|++| +++|+||..||++.+..+
T Consensus 89 ~v~~~m-~------------~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g-~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 89 ELEEIL-R------------DIIYISENLTIDKALERIRKEKLQLAIVVDEYG-GTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp CGGGTC-B------------CCEEEETTSBHHHHHHHHHHHTCSEEEEECTTS-SEEEEEEHHHHHHHHHHT
T ss_pred cHHHhc-C------------CCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCC-CEEEEEEHHHHHHHHhCc
Confidence 799999 4 889999999999999999999999999999988 999999999999999875
No 21
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.76 E-value=8.7e-19 Score=148.84 Aligned_cols=129 Identities=18% Similarity=0.304 Sum_probs=106.9
Q ss_pred CCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCC-CeEEEEEeHHHHHHHhcCCccccccccCcHH
Q 013669 273 QPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQ-KKIVGNVSIRDIRHLLLKPELFSNFRQLTVR 350 (438)
Q Consensus 273 ~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~-~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~ 350 (438)
.++++ +|++ .+++++.+++++.+|++.|.+++++++||+++ + ++++|+||.+|++..+.... ....++.
T Consensus 3 ~~v~~----iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~-~~~~~vGivt~~dl~~~~~~~~----~~~~~v~ 73 (136)
T 3lfr_A 3 LQVRD----IMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGE-SHDDVLGVLLAKDLLPLILKAD----GDSDDVK 73 (136)
T ss_dssp CBHHH----HSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS-STTCEEEEEEGGGGGGGGGSSS----GGGCCGG
T ss_pred CChHh----ccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcC-CCCcEEEEEEHHHHHHHHHhcc----CCCcCHH
Confidence 45677 6873 26899999999999999999999999999997 5 79999999999998765321 2356899
Q ss_pred HHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcCCCCcc
Q 013669 351 DFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFEPPNHL 424 (438)
Q Consensus 351 ~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e~~~~~ 424 (438)
++|+ +++++.+++++.+|+++|.+++++++||+|++| +++|+||++||++.+..+-.+.+
T Consensus 74 ~~m~-------------~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g-~lvGiit~~Dil~~l~~~~~de~ 133 (136)
T 3lfr_A 74 KLLR-------------PATFVPESKRLNVLLREFRANHNHMAIVIDEYG-GVAGLVTIEDVLEQIVGDIEDEH 133 (136)
T ss_dssp GTCB-------------CCCEEETTCBHHHHHHHHHHHTCCEEEEECTTS-CEEEEEEHHHHHTTC--------
T ss_pred HHcC-------------CCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCC-CEEEEEEHHHHHHHHhCCCcCcc
Confidence 9996 689999999999999999999999999999988 99999999999999987554433
No 22
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.75 E-value=3.5e-18 Score=143.69 Aligned_cols=124 Identities=16% Similarity=0.344 Sum_probs=107.6
Q ss_pred ccCCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcH
Q 013669 271 ASQPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTV 349 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v 349 (438)
...++++ +|++ .+++++.+++++.++++.|.+++++++||++++.++++|+||.+|++..+.. ...++
T Consensus 3 ~~~~v~d----iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~-------~~~~v 71 (129)
T 3jtf_A 3 AERTVAD----IMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLE-------PALDI 71 (129)
T ss_dssp -CCBHHH----HCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTC-------TTSCG
T ss_pred CCCCHHH----hCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhcc-------CCcCH
Confidence 3457788 7873 2678999999999999999999999999999622899999999999887542 24578
Q ss_pred HHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 350 RDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 350 ~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
.++|. +++++.+++++.+|+++|.+++++++||+|++| +++|+||++||++.+..|
T Consensus 72 ~~~m~-------------~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g-~~~Giit~~Dil~~l~ge 127 (129)
T 3jtf_A 72 RSLVR-------------PAVFIPEVKRLNVLLREFRASRNHLAIVIDEHG-GISGLVTMEDVLEQIVGD 127 (129)
T ss_dssp GGGCB-------------CCCEEETTCBHHHHHHHHHTSSCCEEEEECC-C-CEEEEEEHHHHHHHHHHT
T ss_pred HHHhC-------------CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCC-CEEEEEEHHHHHHHHhCC
Confidence 89986 688999999999999999999999999999988 999999999999999875
No 23
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.75 E-value=1.1e-18 Score=153.94 Aligned_cols=130 Identities=24% Similarity=0.339 Sum_probs=109.8
Q ss_pred CCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCC-----------
Q 013669 196 STTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGR----------- 264 (438)
Q Consensus 196 ~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~----------- 264 (438)
..+|+++|+ .+++++.+++++.+|+++|.+++++++||+|++ |+++|+||.+|+++.+......
T Consensus 17 ~~~V~diM~----~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~ 91 (170)
T 4esy_A 17 QVPIRDILT----SPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWIYEASEILSRAIP 91 (170)
T ss_dssp TSBGGGGCC----SCCCCEETTSBHHHHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSC
T ss_pred CCCHHHhcC----CCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhccccchhhhhhhccc
Confidence 456999998 789999999999999999999999999999987 8999999999998765432100
Q ss_pred -----CcccccccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 265 -----DWFDIIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 265 -----~~~~~l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
.........++++ +|++ +++++.+++++.+|+++|.+++++++||+| +|+++|+||.+||++++..
T Consensus 92 ~~~~~~~~~~~~~~~v~~----im~~-~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd--~g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 92 APEVEHLFETGRKLTASA----VMTQ-PVVTAAPEDSVGSIADQMRRHGIHRIPVVQ--DGVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp HHHHHHHHHHHTTCBHHH----HCBC-CSCCBCTTSBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHTTTSCC
T ss_pred hhhHHhhhccccccchhh----hccc-CcccCCcchhHHHHHHHHHHcCCcEEEEEE--CCEEEEEEEHHHHHHHHHh
Confidence 0011123457788 7987 899999999999999999999999999998 6899999999999988653
No 24
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.74 E-value=1.2e-17 Score=138.52 Aligned_cols=119 Identities=28% Similarity=0.377 Sum_probs=107.0
Q ss_pred CccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHh
Q 013669 274 PISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFM 353 (438)
Q Consensus 274 ~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m 353 (438)
++++ +|.+ +++++.+++++.++++.|.+++++++||+|+ +|+++|+++.+|++..+... ..++.++|
T Consensus 2 ~v~~----im~~-~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~G~vt~~dl~~~~~~~-------~~~v~~~~ 68 (122)
T 3kpb_A 2 LVKD----ILSK-PPITAHSNISIMEAAKILIKHNINHLPIVDE-HGKLVGIITSWDIAKALAQN-------KKTIEEIM 68 (122)
T ss_dssp BHHH----HCCS-CCCCEETTSBHHHHHHHHHHHTCSCEEEECT-TSBEEEEECHHHHHHHHHTT-------CCBGGGTS
T ss_pred chHH----hhCC-CCEEeCCCCcHHHHHHHHHHcCCCeEEEECC-CCCEEEEEEHHHHHHHHHhc-------ccCHHHHh
Confidence 4566 6887 8899999999999999999999999999997 89999999999999887642 23799999
Q ss_pred cccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 354 NAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
.+ +++++.+++++.++++.|.+++++++||+|++| +++|+||..||++++..
T Consensus 69 ~~------------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g-~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 69 TR------------NVITAHEDEPVDHVAIKMSKYNISGVPVVDDYR-RVVGIVTSEDISRLFGG 120 (122)
T ss_dssp BS------------SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTC-BEEEEEEHHHHHHHHC-
T ss_pred cC------------CCeEECCCCCHHHHHHHHHHhCCCeEEEECCCC-CEEEEEeHHHHHHHhhc
Confidence 74 889999999999999999999999999999988 99999999999998865
No 25
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.74 E-value=3.5e-18 Score=148.03 Aligned_cols=130 Identities=17% Similarity=0.215 Sum_probs=110.0
Q ss_pred ccCCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEE-eCCCCeEEEEEeHHHHHHHhcCCccccccccCc
Q 013669 271 ASQPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVV-EGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLT 348 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVv-d~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~ 348 (438)
...++++ +|++ .+++++.+++++.+|++.|.+++++++||+ ++++|+++|+||.+|++..+... ...+
T Consensus 18 ~~~~v~~----iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~------~~~~ 87 (153)
T 3oco_A 18 NDKVASD----VMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARID------DKAK 87 (153)
T ss_dssp HHCBHHH----HSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHH------TTSB
T ss_pred CCCEeee----EecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcC------CCCc
Confidence 4568888 7874 368999999999999999999999999999 54248999999999999886532 1568
Q ss_pred HHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcCCCCcc
Q 013669 349 VRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFEPPNHL 424 (438)
Q Consensus 349 v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e~~~~~ 424 (438)
+.++| . +++++.+++++.+|++.|.+++++++||+|++| +++|+||++||++.+..+-.+.+
T Consensus 88 v~~~m-~------------~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g-~~vGivt~~dil~~l~~~~~de~ 149 (153)
T 3oco_A 88 ISTIM-R------------DIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYG-GTSGIITDKDVYEELFGNLRDEQ 149 (153)
T ss_dssp GGGTC-B------------CCEEEETTSBHHHHHHHHHHTTCSCEEEECTTS-CEEEEECHHHHHHHHHC------
T ss_pred HHHHh-C------------CCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCC-CEEEEeeHHHHHHHHhccCCCcc
Confidence 99999 4 899999999999999999999999999999988 99999999999999997654443
No 26
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.73 E-value=6.4e-17 Score=137.93 Aligned_cols=137 Identities=18% Similarity=0.383 Sum_probs=110.9
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHH
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVR 350 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~ 350 (438)
..++++++.. +|.. +++++.+++++.+|++.|.+++++++||+|+ +|+++|+++.+|++..+.... + .....++.
T Consensus 6 ~~~~v~~~~~-~~~~-~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~-~-~~~~~~v~ 80 (144)
T 2nyc_A 6 LKIPIGDLNI-ITQD-NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE-NGYLINVYEAYDVLGLIKGGI-Y-NDLSLSVG 80 (144)
T ss_dssp GGSBGGGSSC-CBCS-SCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHTC------CCSBHH
T ss_pred hhcchhhcCC-CCCC-CceEECCCCcHHHHHHHHHHcCcceeeEEcC-CCcEEEEEcHHHHHHHhcccc-c-ccCCccHH
Confidence 4567777554 5665 8999999999999999999999999999997 799999999999998875421 1 12356899
Q ss_pred HHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 351 DFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 351 ~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
++|..... ...+++++.+++++.++++.|.+++++++||+|++| +++|+||.+||++.+..+
T Consensus 81 ~~m~~~~~------~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g-~~~Giit~~dil~~l~~~ 142 (144)
T 2nyc_A 81 EALMRRSD------DFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVG-RLVGVLTLSDILKYILLG 142 (144)
T ss_dssp HHHHHCC------------CEECTTSBHHHHHHHHHHHTCSEEEEECTTS-BEEEEEEHHHHHHHHHHC
T ss_pred HHHhcCcc------ccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCC-CEEEEEEHHHHHHHHHhc
Confidence 99974100 001578999999999999999999999999999887 999999999999998764
No 27
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.73 E-value=4.8e-17 Score=137.84 Aligned_cols=125 Identities=26% Similarity=0.424 Sum_probs=110.3
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHH-HHHhcCCccccccccCcH
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDI-RHLLLKPELFSNFRQLTV 349 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl-~~~l~~~~~~~~~~~~~v 349 (438)
...++++ +|.+ ++.++.+++++.++++.|.+++.+++||+|+ +|+++|+++.+|+ +..+.... ....++
T Consensus 6 ~~~~v~~----im~~-~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~----~~~~~v 75 (138)
T 2p9m_A 6 KNIKVKD----VMTK-NVITAKRHEGVVEAFEKMLKYKISSLPVIDD-ENKVIGIVTTTDIGYNLIRDKY----TLETTI 75 (138)
T ss_dssp TTCBGGG----TSBC-SCCCEETTSBHHHHHHHHHHHTCCEEEEECT-TCBEEEEEEHHHHHHHHTTTCC----CSSCBH
T ss_pred ccCCHHH----hhcC-CceEECCCCcHHHHHHHHHHCCCcEEEEECC-CCeEEEEEEHHHHHHHHHhhcc----cCCcCH
Confidence 4567888 7876 8899999999999999999999999999997 7999999999999 88765322 235689
Q ss_pred HHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCC-----CCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 350 RDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKS-----VHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 350 ~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~-----i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
.++|.. ++.++++++++.++++.|.+++ ++++||+|++| +++|+||..||++.+..
T Consensus 76 ~~~m~~------------~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g-~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 76 GDVMTK------------DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNN-KLVGIISDGDIIRTISK 136 (138)
T ss_dssp HHHSCS------------SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTS-BEEEEEEHHHHHHHHHH
T ss_pred HHHhCC------------CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCC-eEEEEEEHHHHHHHHHh
Confidence 999985 7899999999999999999999 99999999887 99999999999998865
No 28
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.73 E-value=5.6e-17 Score=136.64 Aligned_cols=123 Identities=24% Similarity=0.391 Sum_probs=110.1
Q ss_pred cCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHH
Q 013669 272 SQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRD 351 (438)
Q Consensus 272 ~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~ 351 (438)
..++++ +|.+ ++.++.+++++.++++.|.+++++++||+| +|+++|++|.+|++..+..... ...++.+
T Consensus 3 ~~~v~~----im~~-~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~~~~~----~~~~v~~ 71 (133)
T 2ef7_A 3 EEIVKE----YMKT-QVISVTKDAKLNDIAKVMTEKNIGSVIVVD--GNKPVGIITERDIVKAIGKGKS----LETKAEE 71 (133)
T ss_dssp CCBGGG----TSBC-SCCEEETTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHTTCC----TTCBGGG
T ss_pred cccHHH----hccC-CCEEECCCCcHHHHHHHHHhcCCCEEEEEE--CCEEEEEEcHHHHHHHHhcCCC----cccCHHH
Confidence 457888 7887 799999999999999999999999999999 6899999999999988764321 2468999
Q ss_pred HhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 352 FMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 352 ~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
+|.. ++.++++++++.++++.|.+++++++||+|++| +++|+||..||++.+..
T Consensus 72 ~~~~------------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g-~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 72 FMTA------------SLITIREDSPITGALALMRQFNIRHLPVVDDKG-NLKGIISIRDITRAIDD 125 (133)
T ss_dssp TSEE------------CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTS-CEEEEEEHHHHHHHHHH
T ss_pred HcCC------------CCEEECCCCCHHHHHHHHHHcCCCEEEEECCCC-eEEEEEEHHHHHHHHHH
Confidence 9975 889999999999999999999999999999887 99999999999998875
No 29
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.73 E-value=2.3e-17 Score=146.12 Aligned_cols=131 Identities=16% Similarity=0.198 Sum_probs=112.3
Q ss_pred ccCCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcH
Q 013669 271 ASQPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTV 349 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v 349 (438)
...++++ +|++ .+++++.+++++.++++.|.+++++++||++++.++++|+|+.+|++..+... ...++
T Consensus 34 ~~~~v~d----iM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~------~~~~v 103 (173)
T 3ocm_A 34 AERSIRS----IMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE------GRVRR 103 (173)
T ss_dssp TTSCSTT----TSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHH------SSCCG
T ss_pred CCCCHHH----hCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcC------Ccchh
Confidence 5678899 8974 36899999999999999999999999999986228999999999999886432 13467
Q ss_pred HHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcCCCCcccc
Q 013669 350 RDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFEPPNHLDN 426 (438)
Q Consensus 350 ~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e~~~~~~~ 426 (438)
. ++. +++++.+++++.+|+++|.+++++++||+|++| +++|+||..||++.+..+..+.++.
T Consensus 104 ~-~~~-------------~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g-~lvGiIT~~Dil~~l~~~i~de~~~ 165 (173)
T 3ocm_A 104 N-RLR-------------DPIIVHESIGILRLMDTLKRSRGQLVLVADEFG-AIEGLVTPIDVFEAIAGEFPDEDEL 165 (173)
T ss_dssp G-GSB-------------CCCEECGGGCHHHHHHHHHHSTTCCEEEECTTC-CEEEEECHHHHHHHHHCCCCCTTSC
T ss_pred H-hcC-------------CCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCC-CEEEEEeHHHHHHHHhCcCCCcccc
Confidence 6 443 789999999999999999999999999999988 9999999999999999876665553
No 30
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.72 E-value=2.3e-17 Score=138.31 Aligned_cols=124 Identities=12% Similarity=0.123 Sum_probs=109.3
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHH
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVR 350 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~ 350 (438)
...++++ +|.+ ++.++.+++++.++++.|.+++++++||+|+ |+++|++|.+|++..+..... ...++.
T Consensus 3 ~s~~v~~----~m~~-~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~----~~~~v~ 71 (128)
T 3gby_A 3 ASVTFSY----LAET-DYPVFTLGGSTADAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPT----VKEKLG 71 (128)
T ss_dssp TTCBGGG----GCBC-CSCCEETTSBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCC----TTCBCC
T ss_pred cceEHHH----hhcC-CcceECCCCCHHHHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCc----ccCcHH
Confidence 3467888 7887 7999999999999999999999999999994 899999999999987653221 235788
Q ss_pred HHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 351 DFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 351 ~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
++|.+ ++.++.+++++.++++.|.+++++++||+|++| +++|+||.+||++++..
T Consensus 72 ~~m~~------------~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g-~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 72 EELLE------------TVRSYRPGEQLFDNLISVAAAKCSVVPLADEDG-RYEGVVSRKRILGFLAE 126 (128)
T ss_dssp GGGCB------------CCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTC-BEEEEEEHHHHHHHHHT
T ss_pred HHccC------------CCcEECCCCCHHHHHHHHHhCCCcEEEEECCCC-CEEEEEEHHHHHHHHHh
Confidence 99985 889999999999999999999999999999887 99999999999998864
No 31
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.72 E-value=5.5e-17 Score=138.30 Aligned_cols=122 Identities=17% Similarity=0.221 Sum_probs=107.7
Q ss_pred cCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCC--eEEEEEeHHHHHHHhcCCccccccccCcH
Q 013669 272 SQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQK--KIVGNVSIRDIRHLLLKPELFSNFRQLTV 349 (438)
Q Consensus 272 ~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~--~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v 349 (438)
..++++ +|.+ +++++.+++++.++++.|.+++++++||+|+ ++ +++|+||.+|++..+..... ...++
T Consensus 4 ~~~v~~----im~~-~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~~~Givt~~dl~~~~~~~~~----~~~~v 73 (141)
T 2rih_A 4 AIRTSE----LLKR-PPVSLPETATIREVATELAKNRVGLAVLTAR-DNPKRPVAVVSERDILRAVAQRLD----LDGPA 73 (141)
T ss_dssp -CBGGG----GCCS-CCEEEETTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEEEEHHHHHHHHHTTCC----TTSBS
T ss_pred ceEHHH----HhcC-CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC-CCcceeEEEEEHHHHHHHHhcCCC----CCCCH
Confidence 356788 7886 8999999999999999999999999999997 67 99999999999988754321 25689
Q ss_pred HHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 013669 350 RDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFI 417 (438)
Q Consensus 350 ~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~ 417 (438)
.++|.. +++++.++ ++.+|++.|.+++++++||+|++| +++|+||.+||++.+.
T Consensus 74 ~~~m~~------------~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g-~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 74 MPIANS------------PITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNG-ELVGVLSIRDLCFERA 127 (141)
T ss_dssp GGGCBC------------CCEEETTS-BHHHHHHHHHHHTCSEEEEECTTS-CEEEEEEHHHHHSCHH
T ss_pred HHHcCC------------CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCC-cEEEEEEHHHHHHHHH
Confidence 999974 88999999 999999999999999999999887 9999999999988665
No 32
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.72 E-value=1.1e-16 Score=135.64 Aligned_cols=125 Identities=22% Similarity=0.415 Sum_probs=109.8
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHH-HhcCCccccccccCcH
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRH-LLLKPELFSNFRQLTV 349 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~-~l~~~~~~~~~~~~~v 349 (438)
...++++ +|.+ +++++.+++++.++++.|.+++++++||+|+ +|+++|+||.+|++. ++.... ....++
T Consensus 5 ~~~~v~~----im~~-~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~----~~~~~v 74 (138)
T 2yzi_A 5 MKAPIKV----YMTK-KLLGVKPSTSVQEASRLMMEFDVGSLVVIND-DGNVVGFFTKSDIIRRVIVPGL----PYDIPV 74 (138)
T ss_dssp TTSBGGG----TCBC-CCCEECTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHTTTTCC----CTTSBG
T ss_pred hhhhHHH----HhcC-CCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHHhcCC----cccCCH
Confidence 4567888 7886 8999999999999999999999999999997 799999999999974 433221 235689
Q ss_pred HHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 350 RDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 350 ~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
.++|.. +++++++++++.++++.|.+++++++ |+|++| +++|+||..||++.+..+
T Consensus 75 ~~~m~~------------~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g-~~~Giit~~dil~~~~~~ 130 (138)
T 2yzi_A 75 ERIMTR------------NLITANVNTPLGEVLRKMAEHRIKHI-LIEEEG-KIVGIFTLSDLLEASRRR 130 (138)
T ss_dssp GGTCBC------------SCCEEETTSBHHHHHHHHHHHTCSEE-EEEETT-EEEEEEEHHHHHHHHHCC
T ss_pred HHHhhC------------CCeEECCCCcHHHHHHHHHhcCCCEE-EECCCC-CEEEEEEHHHHHHHHHHH
Confidence 999985 88999999999999999999999999 999887 999999999999998864
No 33
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.72 E-value=1.2e-16 Score=137.32 Aligned_cols=127 Identities=18% Similarity=0.270 Sum_probs=111.5
Q ss_pred CCCCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccc
Q 013669 192 EPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIA 271 (438)
Q Consensus 192 ~~~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~ 271 (438)
..+...+|+++|... .+++++++++++.+|+++|.+++++++||+|++.++++|+||..|+++.+... .
T Consensus 18 ~~l~~~~v~diM~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~---------~ 86 (148)
T 3lv9_A 18 FEFEEKKIREIMVPR--TDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINE---------N 86 (148)
T ss_dssp CGGGTCBGGGTSEET--TTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHH---------S
T ss_pred hccCCCCHHHccccH--HHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcC---------C
Confidence 345667899999832 37999999999999999999999999999997536999999999999887643 1
Q ss_pred cCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 272 SQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 272 ~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
..++++ +| + ++.++.+++++.++++.|.+++++.+||+|+ +|+++|+||..|++..+.
T Consensus 87 ~~~v~~----~m-~-~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 87 KIELEE----IL-R-DIIYISENLTIDKALERIRKEKLQLAIVVDE-YGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp CCCGGG----TC-B-CCEEEETTSBHHHHHHHHHHHTCSEEEEECT-TSSEEEEEEHHHHHHHHH
T ss_pred CccHHH----hc-C-CCeEECCCCCHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHh
Confidence 467888 78 5 7899999999999999999999999999997 799999999999998864
No 34
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=4.6e-17 Score=142.80 Aligned_cols=134 Identities=19% Similarity=0.269 Sum_probs=114.5
Q ss_pred ccccccCCccccccCCCCC--CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCcccccc
Q 013669 267 FDIIASQPISDLGLPFMSS--DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNF 344 (438)
Q Consensus 267 ~~~l~~~~v~~l~l~~m~~--~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~ 344 (438)
...+...++++ +|.+ ++++++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+|++..+.... ...
T Consensus 18 ~~~l~~~~v~d----im~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~--~~~ 90 (165)
T 3fhm_A 18 YFQGMATFVKD----LLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA-DGVVLGIFTERDLVKAVAGQG--AAS 90 (165)
T ss_dssp CCSSSSCBHHH----HHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHHHG--GGG
T ss_pred hHhhhhcCHHH----HhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCeEEEEEEHHHHHHHHHhcC--Ccc
Confidence 33456678888 7874 36999999999999999999999999999997 799999999999998875421 122
Q ss_pred ccCcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcCCC
Q 013669 345 RQLTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFEPP 421 (438)
Q Consensus 345 ~~~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e~~ 421 (438)
...++.++|.. +++++.+++++.+|+++|.+++++++||+|+ | +++|+||..||++++..+..
T Consensus 91 ~~~~v~~~m~~------------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g-~~~Giit~~dil~~~~~~~~ 153 (165)
T 3fhm_A 91 LQQSVSVAMTK------------NVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-G-RLAGIISIGDVVKARIGEIE 153 (165)
T ss_dssp GTSBGGGTSBS------------SCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-T-EEEEEEEHHHHHHHTTCC--
T ss_pred ccCCHHHHhcC------------CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-C-EEEEEEEHHHHHHHHHHHHH
Confidence 45789999985 8899999999999999999999999999999 7 99999999999999986543
No 35
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.71 E-value=4.4e-17 Score=141.82 Aligned_cols=126 Identities=15% Similarity=0.220 Sum_probs=108.0
Q ss_pred chhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCccc
Q 013669 198 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISD 277 (438)
Q Consensus 198 ~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~ 277 (438)
++.++|... .+++++.+++|+.+|+.+|.+++++++||+|++ ++++|++|.+|+++++.... .....+...++.+
T Consensus 16 ~~~~iM~P~--~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~-~~lvGiit~~Di~~~~~~~~--~~~~~~~~~~v~~ 90 (156)
T 3k6e_A 16 QEETFLTPA--KNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHD--LSQEIMADTDIVH 90 (156)
T ss_dssp TGGGGEEET--TSSCCEETTSBHHHHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHT--CCHHHHTTSBGGG
T ss_pred cHHHhCcch--hHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCC-CcEEEEEEecchhhhhhhcc--cccccccccCHHH
Confidence 478888743 789999999999999999999999999999977 89999999999998876541 1222345678889
Q ss_pred cccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 278 LGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 278 l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
+|.+ ++.++.+++++.++++.|.++++ +||+|+ +|+++|+||.+||++.+.
T Consensus 91 ----im~~-~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~-~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 91 ----MTKT-DVAVVSPDFTITEVLHKLVDESF--LPVVDA-EGIFQGIITRKSILKAVN 141 (156)
T ss_dssp ----TCBC-SCCCBCTTCCHHHHHHHTTTSSE--EEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred ----hhcC-CceecccccHHHHHHHHHHHcCC--eEEEec-CCEEEEEEEHHHHHHHHH
Confidence 7887 89999999999999999998764 999997 899999999999998874
No 36
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.71 E-value=6.6e-17 Score=148.12 Aligned_cols=162 Identities=13% Similarity=0.177 Sum_probs=105.7
Q ss_pred CchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCcc
Q 013669 197 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPIS 276 (438)
Q Consensus 197 ~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~ 276 (438)
.++.++|. .+++++.+++++.+|+++|.+++++++||+|++ ++++|++|..|+.+.+ ...+++
T Consensus 13 ~~~~~~~~----~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~-~~l~Givt~~dl~~~~------------~~~~v~ 75 (213)
T 1vr9_A 13 MKVKKWVT----QDFPMVEESATVRECLHRMRQYQTNECIVKDRE-GHFRGVVNKEDLLDLD------------LDSSVF 75 (213)
T ss_dssp CBGGGGCB----SCSCEEETTCBHHHHHHHHHHTTSSEEEEECTT-SBEEEEEEGGGGTTSC------------TTSBSG
T ss_pred cCHHHhhc----CCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCC-CEEEEEEEHHHHHhhc------------CCCcHH
Confidence 44778888 789999999999999999999999999999976 8999999999986533 135788
Q ss_pred ccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhccc
Q 013669 277 DLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAV 356 (438)
Q Consensus 277 ~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~~ 356 (438)
+ +|++ +++++.+++++.++++.|.+++++++||+|+ +|+++|+||.+|++..+.... .+.+.+...
T Consensus 76 ~----im~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~lvGiit~~Dil~~~~~~~--------~~~~~~~~l 141 (213)
T 1vr9_A 76 N----KVSL-PDFFVHEEDNITHALLLFLEHQEPYLPVVDE-EMRLKGAVSLHDFLEALIEAL--------AMDVPGIRF 141 (213)
T ss_dssp G----GCBC-TTCCEETTSBHHHHHHHHHHCCCSEEEEECT-TCBEEEEEEHHHHHHHHHHSC--------C--------
T ss_pred H----HccC-CCEEECCCCcHHHHHHHHHHhCCCEEEEEcC-CCEEEEEEEHHHHHHHHHHHh--------cCCCCcEEE
Confidence 8 7887 8999999999999999999999999999997 799999999999998865211 122333210
Q ss_pred CCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCC
Q 013669 357 VPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEE 400 (438)
Q Consensus 357 ~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g 400 (438)
.+.+.....++.++.+.|.+++++.++|++.+|
T Consensus 142 -----------~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~ 174 (213)
T 1vr9_A 142 -----------SVLLEDKPGELRKVVDALALSNINILSVITTRS 174 (213)
T ss_dssp --------------------------------------------
T ss_pred -----------EEEeCCCCccHHHHHHHHHHCCCcEEEEEEEec
Confidence 111223344599999999999999999986654
No 37
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.71 E-value=7e-17 Score=138.89 Aligned_cols=130 Identities=25% Similarity=0.375 Sum_probs=107.8
Q ss_pred cCCccccccCCCCCC-CceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCc----------c
Q 013669 272 SQPISDLGLPFMSSD-EVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPE----------L 340 (438)
Q Consensus 272 ~~~v~~l~l~~m~~~-~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~----------~ 340 (438)
..++++ +|.+. +++++.+++++.++++.|.+++++++||+|+ +++++|+||.+|++..+.... .
T Consensus 4 ~~~v~~----im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~ 78 (152)
T 4gqw_A 4 VYTVGE----FMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDE-DWKLVGLVSDYDLLALDSGDSTWKTFNAVQKL 78 (152)
T ss_dssp CSBGGG----TSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHTTCC----CCHHHHHHHTC
T ss_pred eEEhhh----ccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeC-CCeEEEEEEHHHHHHhhcccCcccchHHHHHH
Confidence 356778 67642 5899999999999999999999999999997 789999999999976432211 1
Q ss_pred ccccccCcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 341 FSNFRQLTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 341 ~~~~~~~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
.......++.++|.+ +++++.+++++.+|+++|.+++++++||+|++| +++|+||.+||++++...
T Consensus 79 ~~~~~~~~v~~~m~~------------~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g-~~~Giit~~dil~~~~~~ 144 (152)
T 4gqw_A 79 LSKTNGKLVGDLMTP------------APLVVEEKTNLEDAAKILLETKYRRLPVVDSDG-KLVGIITRGNVVRAALQI 144 (152)
T ss_dssp -----CCBHHHHSEE------------SCCCEESSSBHHHHHHHHHHSSCCEEEEECTTS-BEEEEEEHHHHHHHHHC-
T ss_pred HHHhccccHHHhcCC------------CceEECCCCcHHHHHHHHHHCCCCEEEEECCCC-cEEEEEEHHHHHHHHHhc
Confidence 112235689999985 788999999999999999999999999999887 999999999999998853
No 38
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.71 E-value=1.1e-16 Score=133.09 Aligned_cols=117 Identities=21% Similarity=0.338 Sum_probs=104.4
Q ss_pred CCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcccCCCCC
Q 013669 282 FMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAVVPTTP 361 (438)
Q Consensus 282 ~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~~~~~~~ 361 (438)
+|.+ ++.++.+++++.++++.|.+++.+++||+| +|+++|+++.+|++..+.... .....++.++|.+
T Consensus 6 ~m~~-~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~G~it~~dl~~~~~~~~---~~~~~~v~~~m~~------ 73 (125)
T 1pbj_A 6 VMVT-DVDTIDITASLEDVLRNYVENAKGSSVVVK--EGVRVGIVTTWDVLEAIAEGD---DLAEVKVWEVMER------ 73 (125)
T ss_dssp HCBC-SCCEEETTCBHHHHHHHHHHHCCCEEEEEE--TTEEEEEEEHHHHHHHHHHTC---CTTTSBHHHHCBC------
T ss_pred hcCC-CceEECCCCcHHHHHHHHHHcCCCEEEEEe--CCeeEEEEeHHHHHHHHhcCC---cccccCHHHHcCC------
Confidence 6776 899999999999999999999999999999 699999999999998765322 1235689999984
Q ss_pred CCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 362 DSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 362 ~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
++.++.+++++.++++.|.+++++++||+|+ | +++|+||.+||++++..
T Consensus 74 ------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~-~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 74 ------DLVTISPRATIKEAAEKMVKNVVWRLLVEED-D-EIIGVISATDILRAKMA 122 (125)
T ss_dssp ------GGGEECTTSCHHHHHHHHHHHTCSEEEEEET-T-EEEEEEEHHHHHHHHC-
T ss_pred ------CCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-C-EEEEEEEHHHHHHHHHh
Confidence 7899999999999999999999999999998 7 99999999999998875
No 39
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.71 E-value=4.1e-17 Score=137.45 Aligned_cols=124 Identities=18% Similarity=0.305 Sum_probs=107.3
Q ss_pred cCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHH-HhcCCccccccccCcHH
Q 013669 272 SQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRH-LLLKPELFSNFRQLTVR 350 (438)
Q Consensus 272 ~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~-~l~~~~~~~~~~~~~v~ 350 (438)
..++++ +|.+ +++++.+++++.++++.|.+++++++||+|+ +++++|+||.+|++. ++.... .....++.
T Consensus 7 ~~~v~~----im~~-~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~---~~~~~~v~ 77 (133)
T 1y5h_A 7 MTTARD----IMNA-GVTCVGEHETLTAAAQYMREHDIGALPICGD-DDRLHGMLTDRDIVIKGLAAGL---DPNTATAG 77 (133)
T ss_dssp -CCHHH----HSEE-TCCCEETTSBHHHHHHHHHHHTCSEEEEECG-GGBEEEEEEHHHHHHTTGGGTC---CTTTSBHH
T ss_pred hcCHHH----HhcC-CceEeCCCCCHHHHHHHHHHhCCCeEEEECC-CCeEEEEEeHHHHHHHHHhcCC---CccccCHH
Confidence 357778 6876 7899999999999999999999999999987 799999999999984 543221 12356899
Q ss_pred HHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 351 DFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 351 ~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
++|.+ +++++++++++.++++.|.+++++++||+|+ | +++|+||.+||++++..
T Consensus 78 ~~m~~------------~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g-~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 78 ELARD------------SIYYVDANASIQEMLNVMEEHQVRRVPVISE-H-RLVGIVTEADIARHLPE 131 (133)
T ss_dssp HHHTT------------CCCCEETTCCHHHHHHHHHHHTCSEEEEEET-T-EEEEEEEHHHHHHTCC-
T ss_pred HHhcC------------CCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-C-EEEEEEEHHHHHHHHHh
Confidence 99985 8899999999999999999999999999998 6 99999999999998765
No 40
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.70 E-value=1.5e-16 Score=131.74 Aligned_cols=119 Identities=25% Similarity=0.430 Sum_probs=107.6
Q ss_pred chhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCccc
Q 013669 198 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISD 277 (438)
Q Consensus 198 ~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~ 277 (438)
+++++|. .+++++.+++++.+|++.|.+++++++||+|++ |+++|++|..|+++++... ..++.+
T Consensus 2 ~v~~im~----~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~----------~~~v~~ 66 (122)
T 3kpb_A 2 LVKDILS----KPPITAHSNISIMEAAKILIKHNINHLPIVDEH-GKLVGIITSWDIAKALAQN----------KKTIEE 66 (122)
T ss_dssp BHHHHCC----SCCCCEETTSBHHHHHHHHHHHTCSCEEEECTT-SBEEEEECHHHHHHHHHTT----------CCBGGG
T ss_pred chHHhhC----CCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCC-CCEEEEEEHHHHHHHHHhc----------ccCHHH
Confidence 5889998 779999999999999999999999999999976 8999999999999987653 237888
Q ss_pred cccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 278 LGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 278 l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
+|.+ ++.++.+++++.++++.|.+++.+++||+|+ +|+++|+||..|++..+..
T Consensus 67 ----~~~~-~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 67 ----IMTR-NVITAHEDEPVDHVAIKMSKYNISGVPVVDD-YRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp ----TSBS-SCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHC-
T ss_pred ----HhcC-CCeEECCCCCHHHHHHHHHHhCCCeEEEECC-CCCEEEEEeHHHHHHHhhc
Confidence 7876 8899999999999999999999999999997 7999999999999998753
No 41
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.70 E-value=5.3e-17 Score=139.80 Aligned_cols=129 Identities=20% Similarity=0.264 Sum_probs=111.5
Q ss_pred cccCCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCcc--cccccc
Q 013669 270 IASQPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPEL--FSNFRQ 346 (438)
Q Consensus 270 l~~~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~--~~~~~~ 346 (438)
+...++++ +|.+ .+++++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+|++..+..... ......
T Consensus 12 l~~~~v~~----im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~ 86 (150)
T 3lqn_A 12 FQQIFVKD----LMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP-MYKLHGLISTAMILDGILGLERIEFERLEE 86 (150)
T ss_dssp HHHCBHHH----HSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHTBCSSSBCGGGGGG
T ss_pred hhcCChhh----cccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECC-CCCEEEEEEHHHHHHHHHhhcccchhHHhc
Confidence 45668888 7874 26899999999999999999999999999997 8999999999999998754221 112346
Q ss_pred CcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 347 LTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 347 ~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
.++.++|.+ +++++.+++++.+|+++|.++++ +||+|++| +++|+||.+||++++..
T Consensus 87 ~~v~~~m~~------------~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g-~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 87 MKVEQVMKQ------------DIPVLKLEDSFAKALEMTIDHPF--ICAVNEDG-YFEGILTRRAILKLLNK 143 (150)
T ss_dssp CBGGGTCBS------------SCCEEETTCBHHHHHHHHHHCSE--EEEECTTC-BEEEEEEHHHHHHHHHH
T ss_pred CCHHHHhcC------------CCceeCCCCCHHHHHHHHHhCCE--EEEECCCC-cEEEEEEHHHHHHHHHH
Confidence 789999985 88999999999999999999986 99999887 99999999999999875
No 42
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.70 E-value=3.7e-17 Score=142.18 Aligned_cols=118 Identities=16% Similarity=0.352 Sum_probs=105.4
Q ss_pred ccCCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCC-CeEEEEEeHHHHHHHhcCCccccccccCc
Q 013669 271 ASQPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQ-KKIVGNVSIRDIRHLLLKPELFSNFRQLT 348 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~-~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~ 348 (438)
...++++ +|++ .+++++.+++++.++++.|.+++++++||+++ + ++++|+||.+|++..+... ...+
T Consensus 36 ~~~~v~d----iM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~-~~~~lvGivt~~dl~~~~~~~------~~~~ 104 (156)
T 3oi8_A 36 SDLEVRD----AMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGE-DKDEVLGILHAKDLLKYMFNP------EQFH 104 (156)
T ss_dssp TTCBGGG----TCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS-STTCEEEEEEGGGGGGGSSCG------GGCC
T ss_pred CCCCHhh----eeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC-CCCcEEEEEEHHHHHHHHHcC------Cccc
Confidence 5678899 7875 26899999999999999999999999999997 5 5999999999998875432 3568
Q ss_pred HHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHH
Q 013669 349 VRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVI 413 (438)
Q Consensus 349 v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl 413 (438)
+.++|. +++++.+++++.+|++.|.+++++++||+|++| +++|+||++||+
T Consensus 105 v~~im~-------------~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g-~~~Givt~~Dil 155 (156)
T 3oi8_A 105 LKSILR-------------PAVFVPEGKSLTALLKEFREQRNHMAIVIDEYG-GTSGLVTFEDII 155 (156)
T ss_dssp HHHHCB-------------CCCEEETTSBHHHHHHHHHHTTCCEEEEECTTS-SEEEEEEHHHHC
T ss_pred HHHHcC-------------CCEEECCCCCHHHHHHHHHhcCCeEEEEECCCC-CEEEEEEHHHhc
Confidence 999996 688999999999999999999999999999988 999999999986
No 43
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.70 E-value=2e-16 Score=136.70 Aligned_cols=122 Identities=20% Similarity=0.388 Sum_probs=102.5
Q ss_pred CceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcccCCCCCCCCCC
Q 013669 287 EVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAVVPTTPDSGKV 366 (438)
Q Consensus 287 ~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~~ 366 (438)
+++++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+|++..+..... .....++.++|..... ..
T Consensus 30 ~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-~~~~vGivt~~dl~~~~~~~~~--~~~~~~v~~~m~~~~~------~~ 100 (152)
T 2uv4_A 30 NIAMVRTTTPVYVALGIFVQHRVSALPVVDE-KGRVVDIYSKFDVINLAAEKTY--NNLDVSVTKALQHRSH------YF 100 (152)
T ss_dssp SCCCEETTCBHHHHHHHHHHHCCSEEEEECT-TSBEEEEEEHHHHHHHHHCSSC--CCTTSBGGGGGGTCCH------HH
T ss_pred CceEeCCCCcHHHHHHHHHHcCCceEeEECC-CCcEEEEEeHHHHHHHhcchhh--hhhcchHHHHHhhhhc------cc
Confidence 7889999999999999999999999999997 7999999999999988754321 1125678899851000 00
Q ss_pred CCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 367 NPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 367 ~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
.+++++.+++++.+|++.|.+++++++||+|++| +++|+||..||++.+..
T Consensus 101 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g-~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 101 EGVLKCYLHETLETIINRLVEAEVHRLVVVDEND-VVKGIVSLSDILQALVL 151 (152)
T ss_dssp HTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTS-BEEEEEEHHHHHHHHC-
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCC-eEEEEEEHHHHHHHHHh
Confidence 1789999999999999999999999999999887 99999999999998764
No 44
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.69 E-value=1.7e-16 Score=138.51 Aligned_cols=126 Identities=21% Similarity=0.231 Sum_probs=108.2
Q ss_pred cCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCcc-----cccccc
Q 013669 272 SQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPEL-----FSNFRQ 346 (438)
Q Consensus 272 ~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~-----~~~~~~ 346 (438)
..++++ +|.+ +++++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+|++..+..... ......
T Consensus 4 ~~~v~d----im~~-~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~ 77 (160)
T 2o16_A 4 MIKVED----MMTR-HPHTLLRTHTLNDAKHLMEALDIRHVPIVDA-NKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFE 77 (160)
T ss_dssp CCBGGG----TSEE-SCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHHHCC---------CC
T ss_pred cCcHHH----HhcC-CCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHHHhhcccccccchhcc
Confidence 356788 7886 8899999999999999999999999999997 7999999999999887642100 011235
Q ss_pred CcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 013669 347 LTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFI 417 (438)
Q Consensus 347 ~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~ 417 (438)
.++.++|.. +++++++++++.+|++.|.+++++++||+|+ | +++|+||.+||++++.
T Consensus 78 ~~v~~im~~------------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g-~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 78 TPLFEVMHT------------DVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-D-VLVGIITDSDFVTIAI 134 (160)
T ss_dssp CBHHHHSCS------------CEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-T-EEEEEECHHHHHHHHH
T ss_pred cCHHHHhcC------------CCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-C-EEEEEEEHHHHHHHHH
Confidence 689999985 8899999999999999999999999999998 6 9999999999999875
No 45
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.69 E-value=1.6e-16 Score=144.69 Aligned_cols=129 Identities=13% Similarity=0.177 Sum_probs=110.4
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHc---CCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccC
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDN---NIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQL 347 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~---~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~ 347 (438)
...++++ +|++ +++++.+++++.+|++.|.++ +++.+||+|+ +++++|+||.+|++.. . ...
T Consensus 52 ~~~~v~~----iM~~-~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~-~~~lvGivt~~dll~~--~-------~~~ 116 (205)
T 3kxr_A 52 SENEIGR----YTDH-QMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDE-ADKYLGTVRRYDIFKH--E-------PHE 116 (205)
T ss_dssp CTTCGGG----GCBC-CCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECT-TCBEEEEEEHHHHTTS--C-------TTS
T ss_pred CcchHHh----hccC-ceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcC-CCeEEEEEEHHHHHhC--C-------Ccc
Confidence 4568889 8987 899999999999999999997 8899999998 8999999999998643 1 245
Q ss_pred cHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcCCCCccccc
Q 013669 348 TVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFEPPNHLDNY 427 (438)
Q Consensus 348 ~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e~~~~~~~~ 427 (438)
++.++|.+ +++++++++++.+|++.|.+++++++||||++| +++|+||..||++.+..+....+..+
T Consensus 117 ~v~~im~~------------~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g-~lvGiIT~~Dil~~i~~e~~ed~~~~ 183 (205)
T 3kxr_A 117 PLISLLSE------------DSRALTANTTLLDAAEAIEHSREIELPVIDDAG-ELIGRVTLRAATALVREHYEAQLMAT 183 (205)
T ss_dssp BGGGGCCS------------SCCCEETTSCHHHHHHHHHTSSCSEEEEECTTS-BEEEEEEHHHHHHHHHHHHC------
T ss_pred hHHHHhcC------------CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCC-eEEEEEEHHHHHHHHHHHHHHHHHHh
Confidence 89999975 889999999999999999999999999999988 99999999999999986555544443
No 46
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.69 E-value=3.3e-17 Score=142.15 Aligned_cols=130 Identities=18% Similarity=0.237 Sum_probs=109.8
Q ss_pred ccCCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccc-cccccCc
Q 013669 271 ASQPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELF-SNFRQLT 348 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~-~~~~~~~ 348 (438)
...++++ +|++ ++++++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+|++..+...... ..+...+
T Consensus 13 ~~~~v~d----im~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~ 87 (156)
T 3ctu_A 13 LLGQEET----FLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-EKQFVGTIGLRDIMAYQMEHDLSQEIMADTD 87 (156)
T ss_dssp HHTTGGG----GEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHTTSB
T ss_pred HHHHHHH----HcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC-CCEEEEEEcHHHHHHHHHhccccccccccCc
Confidence 4567888 7874 37899999999999999999999999999997 79999999999999887532211 1123568
Q ss_pred HHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcCC
Q 013669 349 VRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFEP 420 (438)
Q Consensus 349 v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e~ 420 (438)
+.++|.. +++++.+++++.+|++.|.+++ ++||+|++| +++|+||.+||++++....
T Consensus 88 v~~~m~~------------~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g-~~~Giit~~dil~~l~~~~ 144 (156)
T 3ctu_A 88 IVHMTKT------------DVAVVSPDFTITEVLHKLVDES--FLPVVDAEG-IFQGIITRKSILKAVNALL 144 (156)
T ss_dssp GGGGCBC------------SCCCBCSSCCHHHHHHHTTTSS--EEEEECTTS-BEEEEEETTHHHHHHHHHS
T ss_pred HHHhccC------------CceeeCCCCcHHHHHHHHHHcC--eEEEEcCCC-eEEEEEEHHHHHHHHHHHH
Confidence 9999974 8899999999999999999986 799999887 9999999999999998643
No 47
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.69 E-value=2.1e-16 Score=133.02 Aligned_cols=125 Identities=13% Similarity=0.143 Sum_probs=107.2
Q ss_pred CchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCcc
Q 013669 197 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPIS 276 (438)
Q Consensus 197 ~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~ 276 (438)
.+++++|... .+++++++++++.+|+++|.+++++++||++++.++++|++|..|+++.+..... +...++.
T Consensus 2 ~~v~~iM~~~--~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~------~~~~~v~ 73 (130)
T 3hf7_A 2 VSVNDIMVPR--NEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKE------FTKEIML 73 (130)
T ss_dssp CBHHHHSEEG--GGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSC------CCHHHHH
T ss_pred cCHHHhCccH--HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCc------cchhhHH
Confidence 4689999632 4689999999999999999999999999997644799999999999998865421 1235677
Q ss_pred ccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 277 DLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 277 ~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
+ +| . ++.++.+++++.++++.|.+++++.+||+|+ +|+++|+||..|++..+.
T Consensus 74 ~----~m-~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 74 R----AA-D-EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDE-YGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp H----HS-B-CCCEEETTCBHHHHHHHHHHHCCCEEEEECT-TSCEEEEEEHHHHHHHHH
T ss_pred H----hc-c-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcC-CCCEEEEeeHHHHHHHHh
Confidence 8 67 3 6889999999999999999999999999997 799999999999998865
No 48
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.69 E-value=3.1e-16 Score=136.63 Aligned_cols=128 Identities=20% Similarity=0.313 Sum_probs=109.4
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHH
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVR 350 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~ 350 (438)
...++++ +|++ ++++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+|++..+..... ....++.
T Consensus 15 ~~~~v~~----im~~--~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~---~~~~~v~ 84 (159)
T 3fv6_A 15 KKLQVKD----FQSI--PVVIHENVSVYDAICTMFLEDVGTLFVVDR-DAVLVGVLSRKDLLRASIGQQE---LTSVPVH 84 (159)
T ss_dssp TTCBGGG----SCBC--CCEEETTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHTSCSC---TTTCBGG
T ss_pred hhCCHHH----HcCC--CEEECCCCcHHHHHHHHHHCCCCEEEEEcC-CCcEEEEEeHHHHHHHhhccCc---ccCcCHH
Confidence 4568889 7875 459999999999999999999999999997 7999999999999987643222 2456899
Q ss_pred HHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCC--eEEEEEeHHHHHHHhhc
Q 013669 351 DFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEA--EVVGVITLRDVISCFIF 418 (438)
Q Consensus 351 ~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~--~lvGvIT~~DIl~~l~~ 418 (438)
++|.+. .+++++.+++++.+|+++|.+++++++||+|++|+ +++|+||.+||++++..
T Consensus 85 ~~m~~~----------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 85 IIMTRM----------PNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp GTSEET----------TSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred HHHcCC----------CCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 999731 16789999999999999999999999999997532 89999999999999873
No 49
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.69 E-value=2.3e-16 Score=133.27 Aligned_cols=123 Identities=19% Similarity=0.381 Sum_probs=106.2
Q ss_pred CccccccCCCC---CCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHH
Q 013669 274 PISDLGLPFMS---SDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVR 350 (438)
Q Consensus 274 ~v~~l~l~~m~---~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~ 350 (438)
++++ +|+ + +++++.+++++.++++.|.+++++++||+| +|+++|+||.+|++..+..... .....++.
T Consensus 7 ~v~~----im~~~~~-~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~~~~~--~~~~~~v~ 77 (135)
T 2rc3_A 7 TVKH----LLQEKGH-TVVAIGPDDSVFNAMQKMAADNIGALLVMK--DEKLVGILTERDFSRKSYLLDK--PVKDTQVK 77 (135)
T ss_dssp BHHH----HHHHHCC-CCCEECTTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHGGGSSS--CGGGSBGG
T ss_pred eHHH----HHhcCCC-CcEEECCCCcHHHHHHHHHhcCCCEEEEEE--CCEEEEEEehHHHHHHHHHcCC--CcccCCHH
Confidence 5677 676 5 789999999999999999999999999998 6899999999999864332111 12466899
Q ss_pred HHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 351 DFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 351 ~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
++|.. ++.++++++++.+|++.|.+++++++||+| +| +++|+||.+||++++..+
T Consensus 78 ~~m~~------------~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g-~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 78 EIMTR------------QVAYVDLNNTNEDCMALITEMRVRHLPVLD-DG-KVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp GTSBC------------SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TT-EEEEEEEHHHHHHHHHC-
T ss_pred HhccC------------CCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CC-EEEEEEEHHHHHHHHHhc
Confidence 99985 889999999999999999999999999999 66 999999999999998764
No 50
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.69 E-value=4.1e-16 Score=135.49 Aligned_cols=128 Identities=14% Similarity=0.284 Sum_probs=109.5
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCce-EeEEeCCCCeEEEEEeHHHHHHHhcC--------Ccc-
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGG-IPVVEGQQKKIVGNVSIRDIRHLLLK--------PEL- 340 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~-lpVvd~~~~~lvGiIs~~Dl~~~l~~--------~~~- 340 (438)
...++++ +|++ +++++.+++++.+|++.|.++++++ +||+|+ + +++|+||.+|++..+.. ...
T Consensus 14 ~~~~v~~----im~~-~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~-~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 14 KVKDVCK----LISL-KPTVVEEDTPIEEIVDRILEDPVTRTVYVARD-N-KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp BHHHHTT----SSCC-CCEEECTTCBHHHHHHHHHHSTTCCEEEEEET-T-EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred ccccHhh----cccC-CCceECCCCCHHHHHHHHHhCCCCccEEEEEC-C-EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 4567888 7887 8999999999999999999999999 999996 5 99999999999887531 000
Q ss_pred ---ccccccCcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 013669 341 ---FSNFRQLTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFI 417 (438)
Q Consensus 341 ---~~~~~~~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~ 417 (438)
.......++.++|. . ++++++++++.+|+++|.+++++++||+|++| +++|+||.+||++.+.
T Consensus 87 ~~~~~~~~~~~v~~im~------------~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g-~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 87 RSSMKRLIAKNASEIML------------D-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKG-EIVGDLNSLEILLALW 152 (157)
T ss_dssp --CCCCCSSCBHHHHCB------------C-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTS-CEEEEEEHHHHHHHHH
T ss_pred HHHHHHHcCCcHHHHcC------------C-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCC-EEEEEEEHHHHHHHHH
Confidence 01234678999997 3 88999999999999999999999999999887 9999999999999987
Q ss_pred cC
Q 013669 418 FE 419 (438)
Q Consensus 418 ~e 419 (438)
.+
T Consensus 153 ~~ 154 (157)
T 1o50_A 153 KG 154 (157)
T ss_dssp HS
T ss_pred Hh
Confidence 53
No 51
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.69 E-value=3.8e-16 Score=138.02 Aligned_cols=128 Identities=11% Similarity=0.133 Sum_probs=109.0
Q ss_pred CCCCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccc
Q 013669 192 EPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIA 271 (438)
Q Consensus 192 ~~~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~ 271 (438)
..+...+|+++|... .+++++++++++.+|+++|.+++++++||+|++.++++|+||..|+++.+... .
T Consensus 37 ~~l~~~~v~diM~~~--~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~---------~ 105 (172)
T 3lhh_A 37 FRLDERTISSLMVPR--SDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAG---------E 105 (172)
T ss_dssp ------CTTTTSEEG--GGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTT---------C
T ss_pred hccCCCCHHHhCccH--HHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhc---------C
Confidence 346667899999833 56899999999999999999999999999987546999999999999987653 2
Q ss_pred cCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 272 SQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 272 ~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
..++++ +| + +++++.+++++.++++.|.+++++.+||+|+ +|+++|+||..|++..+..
T Consensus 106 ~~~v~~----im-~-~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 106 RLELVD----LV-K-NCNFVPNSLSGMELLEHFRTTGSQMVFVVDE-YGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp CCCGGG----GC-B-CCEEEETTCCHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHT
T ss_pred cccHHH----Hh-c-CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC-CCCEEEEeeHHHHHHHHhC
Confidence 467888 78 5 7999999999999999999999999999997 7999999999999998763
No 52
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.68 E-value=5.7e-16 Score=135.10 Aligned_cols=135 Identities=16% Similarity=0.233 Sum_probs=108.5
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeC-CCCeEEEEEeHHHHHHHhcCCcc-ccccccCc
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEG-QQKKIVGNVSIRDIRHLLLKPEL-FSNFRQLT 348 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~~~~lvGiIs~~Dl~~~l~~~~~-~~~~~~~~ 348 (438)
...++++ +|.+ +++++.+++++.+|++.|.+++++++||+|+ ++|+++|+||.+|++..+..... .......+
T Consensus 11 ~~~~v~d----im~~-~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 85 (164)
T 2pfi_A 11 HHVRVEH----FMNH-SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQC 85 (164)
T ss_dssp CSCBHHH----HCBC-CCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCB
T ss_pred cCCCHHH----HcCC-CCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccch
Confidence 3567888 7887 8999999999999999999999999999984 25899999999999988753211 01112457
Q ss_pred HHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 349 VRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 349 v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
+.++|..... ....++++.+++++.+|+++|.+++++++||+| +| +++|+||.+||++.+..
T Consensus 86 v~~~m~~~~~------~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g-~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 86 LQDILARGCP------TEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RG-RAVGCVSWVEMKKAISN 147 (164)
T ss_dssp HHHHHHTTCC------CBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TT-EEEEEEEHHHHHHHHHH
T ss_pred hhhhhccccc------ccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CC-EEEEEEEHHHHHHHHHh
Confidence 9999984100 000178999999999999999999999999999 66 99999999999998873
No 53
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.68 E-value=5.4e-16 Score=130.54 Aligned_cols=122 Identities=24% Similarity=0.413 Sum_probs=109.0
Q ss_pred CCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCc
Q 013669 196 STTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPI 275 (438)
Q Consensus 196 ~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v 275 (438)
..+++++|. .+++++.+++++.+|+++|.+++++++||+| + ++++|++|..|+++++..... ...++
T Consensus 3 ~~~v~~im~----~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~-------~~~~v 69 (133)
T 2ef7_A 3 EEIVKEYMK----TQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-G-NKPVGIITERDIVKAIGKGKS-------LETKA 69 (133)
T ss_dssp CCBGGGTSB----CSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTCC-------TTCBG
T ss_pred cccHHHhcc----CCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-C-CEEEEEEcHHHHHHHHhcCCC-------cccCH
Confidence 456899998 6799999999999999999999999999999 5 899999999999988765421 34678
Q ss_pred cccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 276 SDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 276 ~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
++ +|.+ ++.++.+++++.++++.|.+++.+++||+|+ +|+++|+||..|++..+.
T Consensus 70 ~~----~~~~-~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 70 EE----FMTA-SLITIREDSPITGALALMRQFNIRHLPVVDD-KGNLKGIISIRDITRAID 124 (133)
T ss_dssp GG----TSEE-CCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHH
T ss_pred HH----HcCC-CCEEECCCCCHHHHHHHHHHcCCCEEEEECC-CCeEEEEEEHHHHHHHHH
Confidence 88 7876 8899999999999999999999999999997 799999999999998865
No 54
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.68 E-value=1.4e-16 Score=133.83 Aligned_cols=126 Identities=12% Similarity=0.183 Sum_probs=107.1
Q ss_pred CCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccC
Q 013669 194 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQ 273 (438)
Q Consensus 194 ~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~ 273 (438)
+...+++++|... .+++++++++++.+|+++|.+++++++||+|++.++++|++|..|+++.+.... ...
T Consensus 3 l~~~~v~~iM~~~--~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~--------~~~ 72 (130)
T 3i8n_A 3 AQDVPVTQVMTPR--PVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS--------GQK 72 (130)
T ss_dssp ----CCTTTSCCB--CCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT--------TTS
T ss_pred cCcCCHhhCCCcH--HHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC--------CcC
Confidence 3456789999833 567799999999999999999999999999975479999999999999876541 346
Q ss_pred CccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 274 PISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 274 ~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
++++ +|. ++.++.+++++.++++.|.+++++.+||+|+ +|+++|+||..|++..+.
T Consensus 73 ~v~~----~m~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 73 QLGA----VMR--PIQVVLNNTALPKVFDQMMTHRLQLALVVDE-YGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp BHHH----HSE--ECCEEETTSCHHHHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHHHHH
T ss_pred CHHH----Hhc--CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcC-CCCEEEEEEHHHHHHHHc
Confidence 7888 674 5889999999999999999999999999997 799999999999998764
No 55
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.68 E-value=3.9e-16 Score=131.05 Aligned_cols=122 Identities=11% Similarity=0.168 Sum_probs=105.8
Q ss_pred CCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCc
Q 013669 196 STTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPI 275 (438)
Q Consensus 196 ~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v 275 (438)
..+++++|... .+++++++++++.+|+++|.+++++++||+|++.++++|++|..|+++.+.. ...++
T Consensus 4 ~~~v~diM~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~----------~~~~v 71 (129)
T 3jtf_A 4 ERTVADIMVPR--SRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLE----------PALDI 71 (129)
T ss_dssp CCBHHHHCEEG--GGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTC----------TTSCG
T ss_pred CCCHHHhCccH--HHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhcc----------CCcCH
Confidence 45699999833 4688999999999999999999999999999744799999999999886642 24578
Q ss_pred cccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 276 SDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 276 ~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
++ +|. +++++.+++++.++++.|.+++.+.+||+|+ +|+++|+||..|++..+.
T Consensus 72 ~~----~m~--~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~-~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 72 RS----LVR--PAVFIPEVKRLNVLLREFRASRNHLAIVIDE-HGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp GG----GCB--CCCEEETTCBHHHHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHHHH
T ss_pred HH----HhC--CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHh
Confidence 88 675 4789999999999999999999999999997 799999999999998764
No 56
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.68 E-value=3.8e-16 Score=135.39 Aligned_cols=131 Identities=18% Similarity=0.292 Sum_probs=110.3
Q ss_pred cccCCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccc--ccccc
Q 013669 270 IASQPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELF--SNFRQ 346 (438)
Q Consensus 270 l~~~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~--~~~~~ 346 (438)
+...++++ +|.+ ++++++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+|++..+.....+ .....
T Consensus 8 l~~~~v~~----im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~ 82 (157)
T 2emq_A 8 FMQMTVKP----FLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT-SYKLHGLISMTMMMDAILGLERIEFERLET 82 (157)
T ss_dssp --CCBSTT----TCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT-TCCEEEEEEHHHHHHHSBCSSSBCGGGGGT
T ss_pred HhhCcHHh----hccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC-CCCEEEEeeHHHHHHHHhcccccchHHhcC
Confidence 35567888 7763 36889999999999999999999999999997 79999999999999887542111 12345
Q ss_pred CcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcCC
Q 013669 347 LTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFEP 420 (438)
Q Consensus 347 ~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e~ 420 (438)
.++.++|.. +++++++++++.+|++.|.++++ +||+|++| +++|+||.+||++++....
T Consensus 83 ~~v~~~m~~------------~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g-~~~Giit~~dil~~~~~~~ 141 (157)
T 2emq_A 83 MKVEEVMNR------------NIPRLRLDDSLMKAVGLIVNHPF--VCVENDDG-YFAGIFTRREVLKQLNKQL 141 (157)
T ss_dssp CBGGGTCBC------------CCCEEETTSBHHHHHHHHHHSSE--EEEECSSS-SEEEEEEHHHHHHHHHHTT
T ss_pred CcHHHHhCC------------CCceecCCCcHHHHHHHHhhCCE--EEEEcCCC-eEEEEEEHHHHHHHHHHHh
Confidence 689999985 88999999999999999999987 99999887 9999999999999988643
No 57
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.68 E-value=5.3e-16 Score=133.55 Aligned_cols=121 Identities=17% Similarity=0.364 Sum_probs=106.5
Q ss_pred cCCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHH
Q 013669 272 SQPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVR 350 (438)
Q Consensus 272 ~~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~ 350 (438)
..++++ +|.+ ++++++.+++++.++++.|.+++++++||+|+ +|+++|+||.+|++..+.... .+...++.
T Consensus 27 ~~~v~d----im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~---~~~~~~v~ 98 (149)
T 3k2v_A 27 LLRVND----IMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD-DMNIIGIFTDGDLRRVFDTGV---DMRDASIA 98 (149)
T ss_dssp TSBGGG----TSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT-TCBEEEEEEHHHHHHHHCSSS---CCTTCBHH
T ss_pred ccCHHH----HhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC-CCcEEEEecHHHHHHHHhcCC---CcccCcHH
Confidence 357888 7763 25889999999999999999999999999997 799999999999999876432 23467899
Q ss_pred HHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHH
Q 013669 351 DFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVIS 414 (438)
Q Consensus 351 ~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~ 414 (438)
++|.. +++++++++++.+|++.|.+++++++||+|+ + +++|+||.+||++
T Consensus 99 ~~m~~------------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 99 DVMTR------------GGIRIRPGTLAVDALNLMQSRHITCVLVADG-D-HLLGVVHMHDLLR 148 (149)
T ss_dssp HHSEE------------SCCEECTTCBHHHHHHHHHHHTCSEEEEEET-T-EEEEEEEHHHHTC
T ss_pred HHcCC------------CCeEECCCCCHHHHHHHHHHcCCCEEEEecC-C-EEEEEEEHHHhhc
Confidence 99985 7899999999999999999999999999996 3 9999999999975
No 58
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.68 E-value=4.3e-16 Score=135.19 Aligned_cols=128 Identities=18% Similarity=0.350 Sum_probs=109.1
Q ss_pred CCccccccCCCCC-----CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccC
Q 013669 273 QPISDLGLPFMSS-----DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQL 347 (438)
Q Consensus 273 ~~v~~l~l~~m~~-----~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~ 347 (438)
.++++ +|.+ ++++++.+++++.+|++.|.+++++++||++ +|+++|+||.+|++..+..... .....
T Consensus 7 ~~v~d----im~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~--~~~~~ 78 (157)
T 4fry_A 7 TTVAQ----ILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD--GDDIAGIVTERDYARKVVLQER--SSKAT 78 (157)
T ss_dssp CBHHH----HHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES--SSSEEEEEEHHHHHHHSGGGTC--CSSSC
T ss_pred HHHHH----HHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee--CCEEEEEEEHHHHHHHHHhccC--Ccccc
Confidence 35666 5652 2579999999999999999999999999965 7999999999999988654221 12467
Q ss_pred cHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcCCCC
Q 013669 348 TVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFEPPN 422 (438)
Q Consensus 348 ~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e~~~ 422 (438)
++.++|.+ +++++.+++++.+++++|.+++++++||+| +| +++|+||.+||++++..+...
T Consensus 79 ~v~~~m~~------------~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g-~~~Giit~~dil~~l~~~~~~ 139 (157)
T 4fry_A 79 RVEEIMTA------------KVRYVEPSQSTDECMALMTEHRMRHLPVLD-GG-KLIGLISIGDLVKSVIADQQF 139 (157)
T ss_dssp BHHHHSBS------------SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TT-EEEEEEEHHHHHHHHHTTCCC
T ss_pred CHHHHcCC------------CCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CC-EEEEEEEHHHHHHHHHHHHHh
Confidence 89999985 889999999999999999999999999999 66 999999999999999875543
No 59
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.68 E-value=2.4e-16 Score=131.97 Aligned_cols=123 Identities=12% Similarity=0.238 Sum_probs=105.9
Q ss_pred CchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCcc
Q 013669 197 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPIS 276 (438)
Q Consensus 197 ~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~ 276 (438)
.+++++|... .+++++.+++++.+|+++|.+++++++||+|++.++++|++|..|+++.+.... ...+++
T Consensus 3 ~~v~diM~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~--------~~~~v~ 72 (127)
T 3nqr_A 3 QRVRDIMIPR--SQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDA--------EAFSMD 72 (127)
T ss_dssp CBHHHHSEEG--GGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTC--------CCCCHH
T ss_pred cCHHHhcccH--HHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccC--------CCCCHH
Confidence 4689999832 348999999999999999999999999999975469999999999988765331 356788
Q ss_pred ccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 277 DLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 277 ~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
+ +|. ++.++.+++++.++++.|.+++++.+||+|+ +|+++|+||..|++..+.
T Consensus 73 ~----~m~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 73 K----VLR--TAVVVPESKRVDRMLKEFRSQRYHMAIVIDE-FGGVSGLVTIEDILELIV 125 (127)
T ss_dssp H----HCB--CCCEEETTCBHHHHHHHHHHTTCCEEEEECT-TSCEEEEEEHHHHHHHC-
T ss_pred H----HcC--CCeEECCCCcHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHh
Confidence 8 675 4789999999999999999999999999997 899999999999998754
No 60
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.67 E-value=1.9e-16 Score=137.06 Aligned_cols=126 Identities=14% Similarity=0.251 Sum_probs=110.0
Q ss_pred CCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEE-cCCCCCEEEEEeHHHHHHHhhcCCCCCccccccc
Q 013669 194 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPII-EPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIAS 272 (438)
Q Consensus 194 ~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVv-d~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~ 272 (438)
+...+|+++|... .+++++++++++.+|+++|.+++++++||+ |++.++++|+||..|+++.+... ..
T Consensus 17 l~~~~v~~iM~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~---------~~ 85 (153)
T 3oco_A 17 MNDKVASDVMVDR--TSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARID---------DK 85 (153)
T ss_dssp HHHCBHHHHSEEG--GGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHH---------TT
T ss_pred cCCCEeeeEecch--hheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcC---------CC
Confidence 3456799999831 368999999999999999999999999999 64337999999999999887653 24
Q ss_pred CCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 273 QPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 273 ~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
.++++ +| + ++.++.+++++.++++.|.+++++.+||+|+ +|+++|+||..|++..+..
T Consensus 86 ~~v~~----~m-~-~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~-~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 86 AKIST----IM-R-DIVSVPENMKVPDVMEEMSAHRVPMAIVIDE-YGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp SBGGG----TC-B-CCEEEETTSBHHHHHHHHHHTTCSCEEEECT-TSCEEEEECHHHHHHHHHC
T ss_pred CcHHH----Hh-C-CCeEECCCCCHHHHHHHHHHcCCcEEEEEeC-CCCEEEEeeHHHHHHHHhc
Confidence 67888 78 5 7999999999999999999999999999997 7999999999999988763
No 61
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.67 E-value=1.1e-16 Score=141.88 Aligned_cols=127 Identities=21% Similarity=0.375 Sum_probs=105.9
Q ss_pred CccccccCCCCCC-CceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCc-------------
Q 013669 274 PISDLGLPFMSSD-EVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPE------------- 339 (438)
Q Consensus 274 ~v~~l~l~~m~~~-~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~------------- 339 (438)
++++ +|.+. +++++.+++++.+|++.|.+++++++||+|+ +++++|+||.+|++.+.....
T Consensus 5 ~v~d----im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 79 (180)
T 3sl7_A 5 TVGD----FMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDD-NWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVD 79 (180)
T ss_dssp BHHH----HSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHTCC------------------
T ss_pred eHHH----hcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECC-CCeEEEEEEHHHHHhhhhhccccCCccccccccc
Confidence 5666 56542 5889999999999999999999999999997 799999999999974321000
Q ss_pred -----------cccccccCcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEe
Q 013669 340 -----------LFSNFRQLTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVIT 408 (438)
Q Consensus 340 -----------~~~~~~~~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT 408 (438)
........++.++|.+ +++++++++++.+|+++|.+++++++||+|++| +++|+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~v~~~m~~------------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g-~~vGiit 146 (180)
T 3sl7_A 80 STWKTFNELQKLISKTYGKVVGDLMTP------------SPLVVRDSTNLEDAARLLLETKFRRLPVVDADG-KLIGILT 146 (180)
T ss_dssp -CCCSHHHHHHHHHTTTTCBHHHHSEE------------SCCCEETTSBHHHHHHHHTTSTTCEEEEECTTC-BEEEEEE
T ss_pred chhhhhHHHHHHHhccccccHHHHhCC------------CceEeCCCCcHHHHHHHHHHcCCCEEEEECCCC-eEEEEEE
Confidence 0012235689999985 789999999999999999999999999999887 9999999
Q ss_pred HHHHHHHhhc
Q 013669 409 LRDVISCFIF 418 (438)
Q Consensus 409 ~~DIl~~l~~ 418 (438)
.+||++++..
T Consensus 147 ~~dil~~~~~ 156 (180)
T 3sl7_A 147 RGNVVRAALQ 156 (180)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999864
No 62
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.67 E-value=3.2e-16 Score=132.92 Aligned_cols=124 Identities=11% Similarity=0.179 Sum_probs=107.0
Q ss_pred CchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCcc
Q 013669 197 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPIS 276 (438)
Q Consensus 197 ~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~ 276 (438)
.+|+++|... .+++++.+++++.+|+++|.+++++++||+|++.++++|+||..|+++.+.... ....+++
T Consensus 3 ~~v~~iM~~~--~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~-------~~~~~v~ 73 (136)
T 3lfr_A 3 LQVRDIMVPR--SQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKAD-------GDSDDVK 73 (136)
T ss_dssp CBHHHHSEEG--GGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSS-------GGGCCGG
T ss_pred CChHhccccH--HHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhcc-------CCCcCHH
Confidence 4689999833 468999999999999999999999999999975369999999999998775321 1456788
Q ss_pred ccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 277 DLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 277 ~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
+ +|+ +++++.+++++.++++.|.+++++.+||+|+ +|+++|+||.+|++..+.
T Consensus 74 ~----~m~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 74 K----LLR--PATFVPESKRLNVLLREFRANHNHMAIVIDE-YGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp G----TCB--CCCEEETTCBHHHHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHTTC-
T ss_pred H----HcC--CCeEECCCCcHHHHHHHHHhcCCeEEEEEeC-CCCEEEEEEHHHHHHHHh
Confidence 8 785 4899999999999999999999999999997 799999999999988754
No 63
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.67 E-value=5.4e-16 Score=138.52 Aligned_cols=126 Identities=24% Similarity=0.313 Sum_probs=110.6
Q ss_pred cCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHH
Q 013669 272 SQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRD 351 (438)
Q Consensus 272 ~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~ 351 (438)
..++++ +|.+ +++++.+++++.+|+++|.+++++++||+++ +|+++|++|.+|++..+.... ......++.+
T Consensus 8 ~~~v~~----im~~-~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~-~g~~vGivt~~dl~~~~~~~~--~~~~~~~v~~ 79 (184)
T 1pvm_A 8 FMRVEK----IMNS-NFKTVNWNTTVFDAVKIMNENHLYGLVVKDD-NGNDVGLLSERSIIKRFIPRN--KKPDEVPIRL 79 (184)
T ss_dssp CCBGGG----TSBT-TCCEEETTCBHHHHHHHHHHHTCCEEEEECT-TSCEEEEEEHHHHHHHTGGGC--CCGGGSBGGG
T ss_pred ccCHHH----hcCC-CCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHhhcc--cCcccCCHHH
Confidence 357888 7886 8999999999999999999999999999987 799999999999998765311 1123568999
Q ss_pred HhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 352 FMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 352 ~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
+|.+ +++++.+++++.+|+++|.+++++++||+|++| +++|+||..||++++..
T Consensus 80 im~~------------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g-~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 80 VMRK------------PIPKVKSDYDVKDVAAYLSENGLERCAVVDDPG-RVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp TSBS------------SCCEEETTCBHHHHHHHHHHHTCSEEEEECTTC-CEEEEEEHHHHTTTSCH
T ss_pred HhCC------------CCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCC-eEEEEEEHHHHHHHHHh
Confidence 9985 789999999999999999999999999999887 99999999999987764
No 64
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.67 E-value=3.4e-16 Score=131.10 Aligned_cols=122 Identities=13% Similarity=0.200 Sum_probs=108.2
Q ss_pred CCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCc
Q 013669 196 STTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPI 275 (438)
Q Consensus 196 ~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v 275 (438)
+.+++++|. .++.++.+++++.+|++.|.+++++++||+|+ ++++|++|..|+.+.+..... ...++
T Consensus 4 s~~v~~~m~----~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~-------~~~~v 70 (128)
T 3gby_A 4 SVTFSYLAE----TDYPVFTLGGSTADAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPT-------VKEKL 70 (128)
T ss_dssp TCBGGGGCB----CCSCCEETTSBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCC-------TTCBC
T ss_pred ceEHHHhhc----CCcceECCCCCHHHHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCc-------ccCcH
Confidence 356999999 77999999999999999999999999999997 799999999999987654311 22568
Q ss_pred cccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 276 SDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 276 ~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
++ +|.+ ++.++.+++++.++++.|.++++.++||+|+ +|+++|+||..|++..+.
T Consensus 71 ~~----~m~~-~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~-~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 71 GE----ELLE-TVRSYRPGEQLFDNLISVAAAKCSVVPLADE-DGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp CG----GGCB-CCCCBCTTSBGGGSHHHHHHCSSSEEEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred HH----HccC-CCcEECCCCCHHHHHHHHHhCCCcEEEEECC-CCCEEEEEEHHHHHHHHH
Confidence 88 7886 8899999999999999999999999999997 899999999999998875
No 65
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.66 E-value=6.5e-16 Score=132.92 Aligned_cols=130 Identities=18% Similarity=0.299 Sum_probs=110.6
Q ss_pred CCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCC
Q 013669 195 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQP 274 (438)
Q Consensus 195 ~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~ 274 (438)
...+++++|... .+++++.+++++.+|++.|.+++++++||+|++ |+++|+||..|+++.+...... ........+
T Consensus 13 ~~~~v~~im~~~--~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~-~~~~~~~~~ 88 (150)
T 3lqn_A 13 QQIFVKDLMISS--EKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPM-YKLHGLISTAMILDGILGLERI-EFERLEEMK 88 (150)
T ss_dssp HHCBHHHHSEEG--GGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHTBCSSSB-CGGGGGGCB
T ss_pred hcCChhhcccCC--CceEEECCCCcHHHHHHHHHHcCCcEEEEECCC-CCEEEEEEHHHHHHHHHhhccc-chhHHhcCC
Confidence 345699999832 458999999999999999999999999999977 8999999999999988643211 122335678
Q ss_pred ccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 275 ISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 275 v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
+.+ +|.+ ++.++.+++++.++++.|.++++ +||+|+ +|+++|+||.+|++..+.
T Consensus 89 v~~----~m~~-~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~-~g~~~Giit~~dil~~l~ 142 (150)
T 3lqn_A 89 VEQ----VMKQ-DIPVLKLEDSFAKALEMTIDHPF--ICAVNE-DGYFEGILTRRAILKLLN 142 (150)
T ss_dssp GGG----TCBS-SCCEEETTCBHHHHHHHHHHCSE--EEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred HHH----HhcC-CCceeCCCCCHHHHHHHHHhCCE--EEEECC-CCcEEEEEEHHHHHHHHH
Confidence 888 7886 88999999999999999999987 999997 899999999999999875
No 66
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.66 E-value=1.5e-15 Score=128.57 Aligned_cols=125 Identities=18% Similarity=0.313 Sum_probs=109.1
Q ss_pred CCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHH-hhcCCCCCccccccc
Q 013669 194 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQG-LEGCKGRDWFDIIAS 272 (438)
Q Consensus 194 ~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~-l~~~~~~~~~~~l~~ 272 (438)
+...+++++|. .+++++.+++++.+|++.|.+++++++||+|++ |+++|+||..|+++. +.... ...
T Consensus 4 l~~~~v~~im~----~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~-------~~~ 71 (138)
T 2yzi_A 4 DMKAPIKVYMT----KKLLGVKPSTSVQEASRLMMEFDVGSLVVINDD-GNVVGFFTKSDIIRRVIVPGL-------PYD 71 (138)
T ss_dssp CTTSBGGGTCB----CCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCC-------CTT
T ss_pred hhhhhHHHHhc----CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHhcCC-------ccc
Confidence 45567999998 789999999999999999999999999999976 899999999999853 33221 145
Q ss_pred CCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 273 QPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 273 ~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
.++.+ +|.+ ++.++.+++++.++++.|.+++++++ |+|+ +|+++|+||..|++..+..
T Consensus 72 ~~v~~----~m~~-~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~-~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 72 IPVER----IMTR-NLITANVNTPLGEVLRKMAEHRIKHI-LIEE-EGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp SBGGG----TCBC-SCCEEETTSBHHHHHHHHHHHTCSEE-EEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred CCHHH----HhhC-CCeEECCCCcHHHHHHHHHhcCCCEE-EECC-CCCEEEEEEHHHHHHHHHH
Confidence 67888 7886 89999999999999999999999999 9997 7999999999999988763
No 67
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.66 E-value=1.5e-15 Score=129.34 Aligned_cols=121 Identities=17% Similarity=0.244 Sum_probs=107.3
Q ss_pred CchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCC--CEEEEEeHHHHHHHhhcCCCCCcccccccCC
Q 013669 197 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTP--DIKNYITQSAVVQGLEGCKGRDWFDIIASQP 274 (438)
Q Consensus 197 ~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~--~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~ 274 (438)
.+++++|. .+++++.+++++.+|+++|.+++++++||+|++ + +++|++|..|+++++..... ...+
T Consensus 5 ~~v~~im~----~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~~-------~~~~ 72 (141)
T 2rih_A 5 IRTSELLK----RPPVSLPETATIREVATELAKNRVGLAVLTARD-NPKRPVAVVSERDILRAVAQRLD-------LDGP 72 (141)
T ss_dssp CBGGGGCC----SCCEEEETTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEEEEHHHHHHHHHTTCC-------TTSB
T ss_pred eEHHHHhc----CCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCC-CcceeEEEEEHHHHHHHHhcCCC-------CCCC
Confidence 45899998 779999999999999999999999999999986 7 89999999999998765421 3567
Q ss_pred ccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 275 ISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 275 v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
+.+ +|.+ ++.++.++ ++.++++.|.+++++++||+|+ +|+++|+||.+|++..+.
T Consensus 73 v~~----~m~~-~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 73 AMP----IANS-PITVLDTD-PVHVAAEKMRRHNIRHVVVVNK-NGELVGVLSIRDLCFERA 127 (141)
T ss_dssp SGG----GCBC-CCEEETTS-BHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHSCHH
T ss_pred HHH----HcCC-CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcC-CCcEEEEEEHHHHHHHHH
Confidence 888 7876 89999999 9999999999999999999997 799999999999976543
No 68
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.66 E-value=3.2e-16 Score=139.61 Aligned_cols=129 Identities=19% Similarity=0.288 Sum_probs=108.3
Q ss_pred ccCCccccccCCCCCCC---ceEE--cCCCcHHHHHHHHHHcCCceEeEE--eCCCCeEEEEEeHHHHHHHhcCCcc---
Q 013669 271 ASQPISDLGLPFMSSDE---VITI--QSNELILEAFKRMKDNNIGGIPVV--EGQQKKIVGNVSIRDIRHLLLKPEL--- 340 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~---vv~v--~~~~~l~~a~~~m~~~~~~~lpVv--d~~~~~lvGiIs~~Dl~~~l~~~~~--- 340 (438)
...++++ +|.+.. ++++ .+++++.+|++.|.+++++++||+ |+ +|+++|+||.+|++..+.....
T Consensus 9 ~~~~v~d----im~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~-~~~lvGiit~~dl~~~~~~~~~~~~ 83 (185)
T 2j9l_A 9 HKTLAMD----VMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRE-SQRLVGFVLRRDLIISIENARKKQD 83 (185)
T ss_dssp CCCBHHH----HSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTT-TCBEEEEEEHHHHHHHHHHHHTSCS
T ss_pred ccCcHHH----HhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECC-CCeEEEEEEHHHHHHHHHhhcccCC
Confidence 4567888 787621 7788 999999999999999999999999 55 7999999999999987643110
Q ss_pred ------------------ccccccCcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCe
Q 013669 341 ------------------FSNFRQLTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAE 402 (438)
Q Consensus 341 ------------------~~~~~~~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~ 402 (438)
.......++.++|.. +++++.+++++.+|+++|.+++++++||+| +| +
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~------------~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g-~ 149 (185)
T 2j9l_A 84 GVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDL------------SPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NG-R 149 (185)
T ss_dssp CCCTTCEEECSSSCCCCCTTCCCCEECGGGEES------------SCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TT-E
T ss_pred CccccceeecccCCcccccccccCccHHHhhCc------------CCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CC-E
Confidence 001235678899874 889999999999999999999999999999 66 9
Q ss_pred EEEEEeHHHHHHHhhc
Q 013669 403 VVGVITLRDVISCFIF 418 (438)
Q Consensus 403 lvGvIT~~DIl~~l~~ 418 (438)
++|+||.+||++++..
T Consensus 150 ~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 150 LLGIITKKDVLKHIAQ 165 (185)
T ss_dssp EEEEEEHHHHHHHHHH
T ss_pred EEEEEEHHHHHHHHHH
Confidence 9999999999999874
No 69
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.66 E-value=5.2e-16 Score=135.04 Aligned_cols=130 Identities=18% Similarity=0.251 Sum_probs=110.4
Q ss_pred cccCCccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCcc--cccccc
Q 013669 270 IASQPISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPEL--FSNFRQ 346 (438)
Q Consensus 270 l~~~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~--~~~~~~ 346 (438)
+...++++ +|.+ ++++++.+++++.+|++.|.+++++++||+|+ +|+++|+||.+|++..+..... +.....
T Consensus 11 l~~~~v~~----im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-~~~lvGivt~~dl~~~~~~~~~~~~~~~~~ 85 (159)
T 1yav_A 11 LLEATVGQ----FMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP-SYRLHGLIGTNMIMNSIFGLERIEFEKLDQ 85 (159)
T ss_dssp CTTCBHHH----HSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT-TCBEEEEEEHHHHHHHHBCSSSBCGGGTTT
T ss_pred HhHhhHHH----HhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECC-CCCEEEEeEHHHHHHHhhhhcccchhhhcc
Confidence 34567888 6753 25889999999999999999999999999997 7899999999999998765321 112346
Q ss_pred CcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 347 LTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 347 ~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
.++.++|.+ +++++.+++++.+|++.|.++++ +||+|++| +++|+||.+||++.+..+
T Consensus 86 ~~v~~~m~~------------~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g-~~vGiit~~dil~~~~~~ 143 (159)
T 1yav_A 86 ITVEEVMLT------------DIPRLHINDPIMKGFGMVINNGF--VCVENDEQ-VFEGIFTRRVVLKELNKH 143 (159)
T ss_dssp SBHHHHSBC------------SCCEEETTSBHHHHHHHTTTCSE--EEEECTTC-BEEEEEEHHHHHHHHHHH
T ss_pred CCHHHhcCC------------CCceEcCCCCHHHHHHHHHhCCE--EEEEeCCC-eEEEEEEHHHHHHHHHHH
Confidence 789999985 88999999999999999999976 99999887 999999999999998753
No 70
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.65 E-value=9.7e-16 Score=129.74 Aligned_cols=125 Identities=24% Similarity=0.431 Sum_probs=109.2
Q ss_pred CCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHH-HHHhhcCCCCCccccccc
Q 013669 194 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAV-VQGLEGCKGRDWFDIIAS 272 (438)
Q Consensus 194 ~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di-~~~l~~~~~~~~~~~l~~ 272 (438)
+...+++++|. .+++++.+++++.+|+++|.+++++++||+|++ ++++|++|..|+ .+++.... ...
T Consensus 5 l~~~~v~~im~----~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~-------~~~ 72 (138)
T 2p9m_A 5 LKNIKVKDVMT----KNVITAKRHEGVVEAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRDKY-------TLE 72 (138)
T ss_dssp CTTCBGGGTSB----CSCCCEETTSBHHHHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTTCC-------CSS
T ss_pred cccCCHHHhhc----CCceEECCCCcHHHHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhhcc-------cCC
Confidence 44567999998 679999999999999999999999999999976 899999999999 88775431 145
Q ss_pred CCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcC-----CceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 273 QPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNN-----IGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 273 ~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~-----~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
.++.+ +|.+ ++.++.+++++.++++.|.+++ ++++||+|+ +|+++|+||.+|++..+.
T Consensus 73 ~~v~~----~m~~-~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 73 TTIGD----VMTK-DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK-NNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp CBHHH----HSCS-SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred cCHHH----HhCC-CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC-CCeEEEEEEHHHHHHHHH
Confidence 67888 7876 8899999999999999999999 999999997 799999999999998764
No 71
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=1.2e-15 Score=133.68 Aligned_cols=133 Identities=18% Similarity=0.190 Sum_probs=114.2
Q ss_pred cCCCCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCccccc
Q 013669 191 EEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDII 270 (438)
Q Consensus 191 ~~~~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l 270 (438)
...+...+|+++|... ..+++++.+++++.+|+++|.+++++++||+|++ |+++|+||..|+++.+..... ..
T Consensus 18 ~~~l~~~~v~dim~~~-~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~-----~~ 90 (165)
T 3fhm_A 18 YFQGMATFVKDLLDRK-GRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGA-----AS 90 (165)
T ss_dssp CCSSSSCBHHHHHHHH-CSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGG-----GG
T ss_pred hHhhhhcCHHHHhccC-CCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCC-----cc
Confidence 3456668899999831 1368999999999999999999999999999977 899999999999988765310 12
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
...++.+ +|.+ +++++.+++++.++++.|.+++++++||+|+ |+++|+||..||+..+..
T Consensus 91 ~~~~v~~----~m~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 91 LQQSVSV----AMTK-NVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp GTSBGGG----TSBS-SCCCBCTTCBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTTC
T ss_pred ccCCHHH----HhcC-CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHH
Confidence 4568888 7886 8899999999999999999999999999994 899999999999998764
No 72
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.65 E-value=1.8e-15 Score=125.65 Aligned_cols=121 Identities=18% Similarity=0.215 Sum_probs=106.9
Q ss_pred chhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCccc
Q 013669 198 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISD 277 (438)
Q Consensus 198 ~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~ 277 (438)
+++++|. .+++++.+++++.+|++.|.+++++++||+| + |+++|++|..|+++++..... ....++.+
T Consensus 2 ~v~~~m~----~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-~~~~G~it~~dl~~~~~~~~~------~~~~~v~~ 69 (125)
T 1pbj_A 2 RVEDVMV----TDVDTIDITASLEDVLRNYVENAKGSSVVVK-E-GVRVGIVTTWDVLEAIAEGDD------LAEVKVWE 69 (125)
T ss_dssp CHHHHCB----CSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-T-TEEEEEEEHHHHHHHHHHTCC------TTTSBHHH
T ss_pred CHHHhcC----CCceEECCCCcHHHHHHHHHHcCCCEEEEEe-C-CeeEEEEeHHHHHHHHhcCCc------ccccCHHH
Confidence 4788998 6799999999999999999999999999999 5 899999999999988765421 13567888
Q ss_pred cccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 278 LGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 278 l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
+|.+ ++.++.+++++.++++.|.+++++++||+|+ |+++|+||.+|++..+..
T Consensus 70 ----~m~~-~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 70 ----VMER-DLVTISPRATIKEAAEKMVKNVVWRLLVEED--DEIIGVISATDILRAKMA 122 (125)
T ss_dssp ----HCBC-GGGEECTTSCHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHHC-
T ss_pred ----HcCC-CCeEECCCCCHHHHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHHHHHh
Confidence 7876 8999999999999999999999999999994 899999999999988753
No 73
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.64 E-value=6e-16 Score=133.00 Aligned_cols=132 Identities=16% Similarity=0.254 Sum_probs=107.2
Q ss_pred CchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCC-------cccc
Q 013669 197 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRD-------WFDI 269 (438)
Q Consensus 197 ~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~-------~~~~ 269 (438)
.+++++|... .+++++.+++++.+|+++|.+++++++||+|++ ++++|+||..|+++++....... .+..
T Consensus 5 ~~v~~im~~~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~ 81 (152)
T 4gqw_A 5 YTVGEFMTKK--EDLHVVKPTTTVDEALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSK 81 (152)
T ss_dssp SBGGGTSEES--TTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----CCHHHHHHHTC---
T ss_pred EEhhhccCCC--CCCeEECCCCcHHHHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCcccchHHHHHHHHH
Confidence 5689999831 379999999999999999999999999999987 89999999999986543221100 0111
Q ss_pred cccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 270 IASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 270 l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
....++.+ +|.+ +++++.+++++.++++.|.+++++++||+|+ +|+++|+||.+||+..+..
T Consensus 82 ~~~~~v~~----~m~~-~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~-~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 82 TNGKLVGD----LMTP-APLVVEEKTNLEDAAKILLETKYRRLPVVDS-DGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp --CCBHHH----HSEE-SCCCEESSSBHHHHHHHHHHSSCCEEEEECT-TSBEEEEEEHHHHHHHHHC
T ss_pred hccccHHH----hcCC-CceEECCCCcHHHHHHHHHHCCCCEEEEECC-CCcEEEEEEHHHHHHHHHh
Confidence 23567888 7876 7889999999999999999999999999997 7999999999999998764
No 74
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.64 E-value=1e-15 Score=140.23 Aligned_cols=121 Identities=16% Similarity=0.242 Sum_probs=106.9
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHH
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVR 350 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~ 350 (438)
...++.+ +|.+ +++++.+++++.+++++|.+++++++||+|+ +++++|+||.+|++..+. ..++.
T Consensus 11 ~~~~~~~----~~~~-~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~l~Givt~~dl~~~~~---------~~~v~ 75 (213)
T 1vr9_A 11 HHMKVKK----WVTQ-DFPMVEESATVRECLHRMRQYQTNECIVKDR-EGHFRGVVNKEDLLDLDL---------DSSVF 75 (213)
T ss_dssp --CBGGG----GCBS-CSCEEETTCBHHHHHHHHHHTTSSEEEEECT-TSBEEEEEEGGGGTTSCT---------TSBSG
T ss_pred cccCHHH----hhcC-CCeEECCCCcHHHHHHHHHHCCCCEEEEEcC-CCEEEEEEEHHHHHhhcC---------CCcHH
Confidence 3456666 6876 8999999999999999999999999999997 799999999999876532 45799
Q ss_pred HHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 351 DFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 351 ~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
++|.+ +++++.+++++.+|+++|.+++++++||+|++| +++|+||.+||++.+...
T Consensus 76 ~im~~------------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g-~lvGiit~~Dil~~~~~~ 131 (213)
T 1vr9_A 76 NKVSL------------PDFFVHEEDNITHALLLFLEHQEPYLPVVDEEM-RLKGAVSLHDFLEALIEA 131 (213)
T ss_dssp GGCBC------------TTCCEETTSBHHHHHHHHHHCCCSEEEEECTTC-BEEEEEEHHHHHHHHHHS
T ss_pred HHccC------------CCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCC-EEEEEEEHHHHHHHHHHH
Confidence 99985 889999999999999999999999999999887 999999999999988753
No 75
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.63 E-value=2e-15 Score=129.86 Aligned_cols=121 Identities=19% Similarity=0.304 Sum_probs=105.9
Q ss_pred CchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCcc
Q 013669 197 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPIS 276 (438)
Q Consensus 197 ~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~ 276 (438)
.+++++|... .+++++.+++++.+|+++|.+++++++||+|++ |+++|+||..|+++.+..... +...++.
T Consensus 28 ~~v~dim~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~------~~~~~v~ 98 (149)
T 3k2v_A 28 LRVNDIMHTG--DEIPHVGLQATLRDALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVD------MRDASIA 98 (149)
T ss_dssp SBGGGTSBCG--GGSCEECTTCBHHHHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSC------CTTCBHH
T ss_pred cCHHHHhcCC--CCCeEECCCCcHHHHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCC------cccCcHH
Confidence 4699999821 279999999999999999999999999999977 899999999999998865421 2456888
Q ss_pred ccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHH
Q 013669 277 DLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRH 333 (438)
Q Consensus 277 ~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~ 333 (438)
+ +|.+ +++++.+++++.++++.|.+++++.+||+|+ ++++|+||..||+.
T Consensus 99 ~----~m~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~~~~Giit~~dil~ 148 (149)
T 3k2v_A 99 D----VMTR-GGIRIRPGTLAVDALNLMQSRHITCVLVADG--DHLLGVVHMHDLLR 148 (149)
T ss_dssp H----HSEE-SCCEECTTCBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHTC
T ss_pred H----HcCC-CCeEECCCCCHHHHHHHHHHcCCCEEEEecC--CEEEEEEEHHHhhc
Confidence 8 7876 7899999999999999999999999999995 49999999999863
No 76
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.63 E-value=2.1e-15 Score=131.47 Aligned_cols=128 Identities=17% Similarity=0.311 Sum_probs=107.7
Q ss_pred CchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCC--cccccccCC
Q 013669 197 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRD--WFDIIASQP 274 (438)
Q Consensus 197 ~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~--~~~~l~~~~ 274 (438)
.+|+++|. .+++++.+++++.+|+++|.+++++++||+|++ |+++|+||..|+++++....... ........+
T Consensus 5 ~~v~dim~----~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~ 79 (160)
T 2o16_A 5 IKVEDMMT----RHPHTLLRTHTLNDAKHLMEALDIRHVPIVDAN-KKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETP 79 (160)
T ss_dssp CBGGGTSE----ESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHHHCC---------CCCB
T ss_pred CcHHHHhc----CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHHhhcccccccchhcccC
Confidence 56899998 679999999999999999999999999999976 89999999999998875321000 001124567
Q ss_pred ccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 275 ISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 275 v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
+.+ +|.+ +++++.+++++.++++.|.+++++++||+| +|+++|+||.+||+..+.
T Consensus 80 v~~----im~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd--~g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 80 LFE----VMHT-DVTSVAPQAGLKESAIYMQKHKIGCLPVVA--KDVLVGIITDSDFVTIAI 134 (160)
T ss_dssp HHH----HSCS-CEEEBCTTSBHHHHHHHHHHTTCSCEEEEE--TTEEEEEECHHHHHHHHH
T ss_pred HHH----HhcC-CCeEECCCCCHHHHHHHHHHhCCCEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 888 7886 899999999999999999999999999999 489999999999998865
No 77
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.63 E-value=3.4e-15 Score=130.00 Aligned_cols=125 Identities=12% Similarity=0.332 Sum_probs=107.6
Q ss_pred CCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCC
Q 013669 195 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQP 274 (438)
Q Consensus 195 ~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~ 274 (438)
...+|+++|. .+ +++.+++++.+|+++|.+++++++||+|++ ++++|+||..|+++.+..... ....+
T Consensus 15 ~~~~v~~im~----~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~------~~~~~ 82 (159)
T 3fv6_A 15 KKLQVKDFQS----IP-VVIHENVSVYDAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIGQQE------LTSVP 82 (159)
T ss_dssp TTCBGGGSCB----CC-CEEETTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTSCSC------TTTCB
T ss_pred hhCCHHHHcC----CC-EEECCCCcHHHHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhccCc------ccCcC
Confidence 3456999998 54 599999999999999999999999999976 899999999999997754311 14567
Q ss_pred ccccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCC---eEEEEEeHHHHHHHhc
Q 013669 275 ISDLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQK---KIVGNVSIRDIRHLLL 336 (438)
Q Consensus 275 v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~---~lvGiIs~~Dl~~~l~ 336 (438)
+.+ +|.+ .+++++.+++++.++++.|.+++++++||+|+ +| +++|+||.+||+..+.
T Consensus 83 v~~----~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~~~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 83 VHI----IMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKD-TDKGFEVIGRVTKTNMTKILV 143 (159)
T ss_dssp GGG----TSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE-CSSSEEEEEEEEHHHHHHHHH
T ss_pred HHH----HHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC-CCcceeEEEEEEHHHHHHHHH
Confidence 888 6763 25789999999999999999999999999997 66 9999999999998875
No 78
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.63 E-value=4e-15 Score=128.92 Aligned_cols=131 Identities=14% Similarity=0.277 Sum_probs=109.2
Q ss_pred CCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccC
Q 013669 194 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQ 273 (438)
Q Consensus 194 ~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~ 273 (438)
+...+++++|... .+++++.+++++.+|++.|.+++++++||+|++ |+++|+||..|+++.+...... ....+...
T Consensus 8 l~~~~v~~im~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~-~~~~~~~~ 83 (157)
T 2emq_A 8 FMQMTVKPFLIPA--DKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTS-YKLHGLISMTMMMDAILGLERI-EFERLETM 83 (157)
T ss_dssp --CCBSTTTCEEG--GGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTT-CCEEEEEEHHHHHHHSBCSSSB-CGGGGGTC
T ss_pred HhhCcHHhhccCC--ccceEECCCCcHHHHHHHHHHCCceEEEEEcCC-CCEEEEeeHHHHHHHHhccccc-chHHhcCC
Confidence 4456799999821 278999999999999999999999999999976 8999999999999887643111 11223466
Q ss_pred CccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 274 PISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 274 ~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
++.+ +|.+ +++++.+++++.++++.|.++++ +||+|+ +|+++|+||.+|++..+.
T Consensus 84 ~v~~----~m~~-~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~-~g~~~Giit~~dil~~~~ 138 (157)
T 2emq_A 84 KVEE----VMNR-NIPRLRLDDSLMKAVGLIVNHPF--VCVEND-DGYFAGIFTRREVLKQLN 138 (157)
T ss_dssp BGGG----TCBC-CCCEEETTSBHHHHHHHHHHSSE--EEEECS-SSSEEEEEEHHHHHHHHH
T ss_pred cHHH----HhCC-CCceecCCCcHHHHHHHHhhCCE--EEEEcC-CCeEEEEEEHHHHHHHHH
Confidence 8888 7887 89999999999999999999987 999997 799999999999998875
No 79
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.62 E-value=1.2e-15 Score=128.30 Aligned_cols=125 Identities=20% Similarity=0.361 Sum_probs=106.5
Q ss_pred CCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHH-HHhhcCCCCCccccccc
Q 013669 194 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVV-QGLEGCKGRDWFDIIAS 272 (438)
Q Consensus 194 ~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~-~~l~~~~~~~~~~~l~~ 272 (438)
+...+++++|. .+++++.+++++.+|+++|.+++++++||+|++ ++++|++|..|++ +++..... ...
T Consensus 5 ~~~~~v~~im~----~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~------~~~ 73 (133)
T 1y5h_A 5 FTMTTARDIMN----AGVTCVGEHETLTAAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGLD------PNT 73 (133)
T ss_dssp ---CCHHHHSE----ETCCCEETTSBHHHHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTCC------TTT
T ss_pred hhhcCHHHHhc----CCceEeCCCCCHHHHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCCC------ccc
Confidence 33457999998 679999999999999999999999999999876 8999999999998 45544311 134
Q ss_pred CCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 273 QPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 273 ~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
.++.+ +|.+ ++.++.+++++.++++.|.+++.+++||+| +|+++|+||.+|++..+.
T Consensus 74 ~~v~~----~m~~-~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd--~g~~~Giit~~dil~~l~ 130 (133)
T 1y5h_A 74 ATAGE----LARD-SIYYVDANASIQEMLNVMEEHQVRRVPVIS--EHRLVGIVTEADIARHLP 130 (133)
T ss_dssp SBHHH----HHTT-CCCCEETTCCHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHTCC
T ss_pred cCHHH----HhcC-CCEEECCCCCHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 67888 7876 889999999999999999999999999999 489999999999988754
No 80
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.62 E-value=7.7e-15 Score=123.81 Aligned_cols=125 Identities=13% Similarity=0.272 Sum_probs=106.3
Q ss_pred chhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCccc
Q 013669 198 TVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISD 277 (438)
Q Consensus 198 ~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~ 277 (438)
+++++|... ..+++++++++++.+|++.|.+++++++||+| + ++++|++|..|+++.+.... . .....++.+
T Consensus 7 ~v~~im~~~-~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~-~----~~~~~~v~~ 78 (135)
T 2rc3_A 7 TVKHLLQEK-GHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-D-EKLVGILTERDFSRKSYLLD-K----PVKDTQVKE 78 (135)
T ss_dssp BHHHHHHHH-CCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHGGGSS-S----CGGGSBGGG
T ss_pred eHHHHHhcC-CCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-C-CEEEEEEehHHHHHHHHHcC-C----CcccCCHHH
Confidence 588998621 14589999999999999999999999999998 5 89999999999997544321 1 124568888
Q ss_pred cccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 278 LGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 278 l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
+|.+ ++.++.+++++.++++.|.+++++++||+| +|+++|+||.+|++..+.+
T Consensus 79 ----~m~~-~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 79 ----IMTR-QVAYVDLNNTNEDCMALITEMRVRHLPVLD--DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp ----TSBC-SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHC
T ss_pred ----hccC-CCeEECCCCcHHHHHHHHHHhCCCEEEEEe--CCEEEEEEEHHHHHHHHHh
Confidence 7887 899999999999999999999999999999 5899999999999988754
No 81
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.62 E-value=2.7e-15 Score=130.45 Aligned_cols=131 Identities=16% Similarity=0.288 Sum_probs=110.4
Q ss_pred CCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccC
Q 013669 194 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQ 273 (438)
Q Consensus 194 ~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~ 273 (438)
+...+++++|... .+++++.+++++.+|+++|.+++++++||+|++ ++++|+||..|+++.+...... ........
T Consensus 11 l~~~~v~~im~~~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~-~~~~~~~~ 86 (159)
T 1yav_A 11 LLEATVGQFMIEA--DKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGLERI-EFEKLDQI 86 (159)
T ss_dssp CTTCBHHHHSEEG--GGSCCEETTCBHHHHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCSSSB-CGGGTTTS
T ss_pred HhHhhHHHHhCCc--cceEEECCCCcHHHHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhhccc-chhhhccC
Confidence 4457799999821 269999999999999999999999999999976 8999999999999987653211 11223466
Q ss_pred CccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 274 PISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 274 ~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
++.+ +|.+ ++.++.+++++.++++.|.++++ +||+|+ +|+++|+||.+|++..+.
T Consensus 87 ~v~~----~m~~-~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~-~g~~vGiit~~dil~~~~ 141 (159)
T 1yav_A 87 TVEE----VMLT-DIPRLHINDPIMKGFGMVINNGF--VCVEND-EQVFEGIFTRRVVLKELN 141 (159)
T ss_dssp BHHH----HSBC-SCCEEETTSBHHHHHHHTTTCSE--EEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred CHHH----hcCC-CCceEcCCCCHHHHHHHHHhCCE--EEEEeC-CCeEEEEEEHHHHHHHHH
Confidence 8888 7886 88999999999999999999887 999997 799999999999998865
No 82
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.62 E-value=1.5e-15 Score=131.68 Aligned_cols=127 Identities=15% Similarity=0.199 Sum_probs=107.7
Q ss_pred CchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCcc
Q 013669 197 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPIS 276 (438)
Q Consensus 197 ~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~ 276 (438)
.+++++|... .+++++.+++++.+|+++|.+++++++||+|++ |+++|+||..|+++.+.... .....+...++.
T Consensus 15 ~~v~dim~p~--~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~--~~~~~~~~~~v~ 89 (156)
T 3ctu_A 15 GQEETFLTPA--KNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHD--LSQEIMADTDIV 89 (156)
T ss_dssp TTGGGGEEEG--GGCCCEETTSBHHHHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHT--CCHHHHTTSBGG
T ss_pred HHHHHHcCcc--cCceEECCCCCHHHHHHHHHHCCCceEeEECCC-CEEEEEEcHHHHHHHHHhcc--ccccccccCcHH
Confidence 4589999843 568999999999999999999999999999977 89999999999999886531 111122367888
Q ss_pred ccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 277 DLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 277 ~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
+ +|.+ +++++.+++++.++++.|.+++ ++||+|+ +|+++|+||.+|++..+.
T Consensus 90 ~----~m~~-~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~-~g~~~Giit~~dil~~l~ 141 (156)
T 3ctu_A 90 H----MTKT-DVAVVSPDFTITEVLHKLVDES--FLPVVDA-EGIFQGIITRKSILKAVN 141 (156)
T ss_dssp G----GCBC-SCCCBCSSCCHHHHHHHTTTSS--EEEEECT-TSBEEEEEETTHHHHHHH
T ss_pred H----hccC-CceeeCCCCcHHHHHHHHHHcC--eEEEEcC-CCeEEEEEEHHHHHHHHH
Confidence 9 7876 8899999999999999999886 6999997 899999999999999875
No 83
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.61 E-value=3.2e-15 Score=129.10 Aligned_cols=116 Identities=16% Similarity=0.227 Sum_probs=100.8
Q ss_pred CCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCccccccCCCC----
Q 013669 209 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMS---- 284 (438)
Q Consensus 209 ~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~l~l~~m~---- 284 (438)
.+++++.+++++.+|+++|.+++++.+||+|++ |+++|++|..|+++.+..... . ....++.+ +|.
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~-~----~~~~~v~~----~m~~~~~ 98 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTY-N----NLDVSVTK----ALQHRSH 98 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSC-C----CTTSBGGG----GGGTCCH
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhh-h----hhcchHHH----HHhhhhc
Confidence 468899999999999999999999999999976 899999999999988765321 0 13456777 675
Q ss_pred --CCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 285 --SDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 285 --~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
. ++.++.+++++.++++.|.+++++++||+|+ +|+++|+||..|++..+.
T Consensus 99 ~~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 99 YFE-GVLKCYLHETLETIINRLVEAEVHRLVVVDE-NDVVKGIVSLSDILQALV 150 (152)
T ss_dssp HHH-TCSEECTTSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHC
T ss_pred ccC-CCeEECCCCcHHHHHHHHHHcCCeEEEEECC-CCeEEEEEEHHHHHHHHH
Confidence 4 7899999999999999999999999999997 799999999999998864
No 84
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.61 E-value=5.3e-15 Score=132.00 Aligned_cols=124 Identities=14% Similarity=0.259 Sum_probs=108.7
Q ss_pred CchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCcc
Q 013669 197 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPIS 276 (438)
Q Consensus 197 ~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~ 276 (438)
.+++++|. .+++++.+++++.+|+++|.+++++++||+|++ |+++|++|..|+++.+..... .....++.
T Consensus 9 ~~v~~im~----~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~-----~~~~~~v~ 78 (184)
T 1pvm_A 9 MRVEKIMN----SNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNK-----KPDEVPIR 78 (184)
T ss_dssp CBGGGTSB----TTCCEEETTCBHHHHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCC-----CGGGSBGG
T ss_pred cCHHHhcC----CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhccc-----CcccCCHH
Confidence 46899998 789999999999999999999999999999976 899999999999987753210 11456788
Q ss_pred ccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 277 DLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 277 ~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
+ +|.+ +++++.+++++.++++.|.+++++.+||+|+ +|+++|+||..||+..+.
T Consensus 79 ~----im~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 79 L----VMRK-PIPKVKSDYDVKDVAAYLSENGLERCAVVDD-PGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp G----TSBS-SCCEEETTCBHHHHHHHHHHHTCSEEEEECT-TCCEEEEEEHHHHTTTSC
T ss_pred H----HhCC-CCcEECCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHHHHH
Confidence 8 7886 8899999999999999999999999999997 799999999999987654
No 85
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.61 E-value=3.1e-15 Score=127.35 Aligned_cols=126 Identities=17% Similarity=0.264 Sum_probs=104.4
Q ss_pred CCchhh---hccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCccccccc
Q 013669 196 STTVRS---IIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIAS 272 (438)
Q Consensus 196 ~~~v~d---i~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~ 272 (438)
..++++ +|. .+++++.+++++.+|+++|.+++++++||+|++ ++++|++|..|+++++..... ....
T Consensus 7 ~~~v~~~~~~~~----~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~-----~~~~ 76 (144)
T 2nyc_A 7 KIPIGDLNIITQ----DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIY-----NDLS 76 (144)
T ss_dssp GSBGGGSSCCBC----SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC---------CC
T ss_pred hcchhhcCCCCC----CCceEECCCCcHHHHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhccccc-----ccCC
Confidence 345777 555 679999999999999999999999999999976 899999999999988764310 0134
Q ss_pred CCccccccCCCCCC-----CceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 273 QPISDLGLPFMSSD-----EVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 273 ~~v~~l~l~~m~~~-----~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
.++.+ +|.+. ++.++.+++++.++++.|.+++++++||+|+ +|+++|+||.+|++..+.
T Consensus 77 ~~v~~----~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 77 LSVGE----ALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD-VGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp SBHHH----HHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred ccHHH----HHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECC-CCCEEEEEEHHHHHHHHH
Confidence 57777 56531 5889999999999999999999999999997 799999999999998864
No 86
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.61 E-value=1.3e-15 Score=132.22 Aligned_cols=121 Identities=11% Similarity=0.173 Sum_probs=105.1
Q ss_pred CCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccC
Q 013669 194 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQ 273 (438)
Q Consensus 194 ~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~ 273 (438)
+...+|+++|... .+++++++++++.+|+++|.+++++++||+|++.++++|+||..|+++.+... ...
T Consensus 35 l~~~~v~diM~~~--~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~---------~~~ 103 (156)
T 3oi8_A 35 FSDLEVRDAMITR--SRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP---------EQF 103 (156)
T ss_dssp HTTCBGGGTCEEG--GGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG---------GGC
T ss_pred cCCCCHhheeeeH--HHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC---------Ccc
Confidence 5567899999832 36899999999999999999999999999997634999999999998765432 346
Q ss_pred CccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHH
Q 013669 274 PISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIR 332 (438)
Q Consensus 274 ~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~ 332 (438)
++++ +|. +++++.+++++.++++.|.+++++.+||+|+ +|+++|+||..|++
T Consensus 104 ~v~~----im~--~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-~g~~~Givt~~Dil 155 (156)
T 3oi8_A 104 HLKS----ILR--PAVFVPEGKSLTALLKEFREQRNHMAIVIDE-YGGTSGLVTFEDII 155 (156)
T ss_dssp CHHH----HCB--CCCEEETTSBHHHHHHHHHHTTCCEEEEECT-TSSEEEEEEHHHHC
T ss_pred cHHH----HcC--CCEEECCCCCHHHHHHHHHhcCCeEEEEECC-CCCEEEEEEHHHhc
Confidence 7888 675 4889999999999999999999999999997 79999999999985
No 87
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.61 E-value=5.9e-15 Score=128.58 Aligned_cols=130 Identities=16% Similarity=0.229 Sum_probs=106.1
Q ss_pred CCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcC-CCCCEEEEEeHHHHHHHhhcCCCCCccccccc
Q 013669 194 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEP-GTPDIKNYITQSAVVQGLEGCKGRDWFDIIAS 272 (438)
Q Consensus 194 ~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~-~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~ 272 (438)
....+++++|. .+++++.+++++.+|+++|.+++++++||+|+ ++++++|+||..|+++.+..... .. .....
T Consensus 10 ~~~~~v~dim~----~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~-~~-~~~~~ 83 (164)
T 2pfi_A 10 SHHVRVEHFMN----HSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPP-SR-APGHQ 83 (164)
T ss_dssp CCSCBHHHHCB----CCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC---------CCC
T ss_pred ccCCCHHHHcC----CCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhcc-cc-CCccc
Confidence 34467999998 67999999999999999999999999999996 23899999999999988754311 00 01123
Q ss_pred CCccccccCCCCCCC------ceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 273 QPISDLGLPFMSSDE------VITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 273 ~~v~~l~l~~m~~~~------vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
.++.+ +|.. + ++++.+++++.++++.|.+++++++||+| +|+++|+||.+||+..+.
T Consensus 84 ~~v~~----~m~~-~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~l~Giit~~dil~~~~ 146 (164)
T 2pfi_A 84 QCLQD----ILAR-GCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS--RGRAVGCVSWVEMKKAIS 146 (164)
T ss_dssp CBHHH----HHHT-TCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHHH
T ss_pred chhhh----hhcc-cccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE--CCEEEEEEEHHHHHHHHH
Confidence 45666 4544 3 78999999999999999999999999999 689999999999998865
No 88
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.61 E-value=5e-15 Score=131.03 Aligned_cols=125 Identities=15% Similarity=0.104 Sum_probs=106.3
Q ss_pred CCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccC
Q 013669 194 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQ 273 (438)
Q Consensus 194 ~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~ 273 (438)
+...+|+++|... .+++++++++++.+|+++|.+++++++||+|++.++++|+||.+|+++.+... ...
T Consensus 33 l~~~~v~diM~~~--~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~---------~~~ 101 (173)
T 3ocm_A 33 LAERSIRSIMTPR--TDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE---------GRV 101 (173)
T ss_dssp HTTSCSTTTSEEG--GGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHH---------SSC
T ss_pred cCCCCHHHhCCcH--HHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcC---------Ccc
Confidence 5567799999732 56899999999999999999999999999987547999999999999887543 122
Q ss_pred CccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 274 PISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 274 ~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
++. + .. +++++.+++++.++++.|.+++++.+||+|+ +|+++|+||..||+..+..
T Consensus 102 ~v~-~-----~~-~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde-~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 102 RRN-R-----LR-DPIIVHESIGILRLMDTLKRSRGQLVLVADE-FGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp CGG-G-----SB-CCCEECGGGCHHHHHHHHHHSTTCCEEEECT-TCCEEEEECHHHHHHHHHC
T ss_pred hhH-h-----cC-CCeEECCCCcHHHHHHHHHHcCCeEEEEEeC-CCCEEEEEeHHHHHHHHhC
Confidence 333 2 23 6889999999999999999999999999997 7999999999999998763
No 89
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.60 E-value=2.3e-15 Score=133.26 Aligned_cols=131 Identities=15% Similarity=0.250 Sum_probs=106.5
Q ss_pred CchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCC------------C
Q 013669 197 TTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKG------------R 264 (438)
Q Consensus 197 ~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~------------~ 264 (438)
.+|+++|... .+++++.+++++.+|+++|.+++++++||+|++ ++++|+||..|++++...... .
T Consensus 4 ~~v~dim~~~--~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 4 YTVGDFMTPR--QNLHVVKPSTSVDDALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CBHHHHSEEG--GGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC-------------------
T ss_pred eeHHHhcCCC--CCceeeCCCCcHHHHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 4589999821 279999999999999999999999999999987 899999999999853211100 0
Q ss_pred Ccc---------cccccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHh
Q 013669 265 DWF---------DIIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLL 335 (438)
Q Consensus 265 ~~~---------~~l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l 335 (438)
.|. ......++++ +|.+ +++++.+++++.++++.|.+++++++||+|+ +|+++|+||.+||+..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~----~m~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dil~~~ 154 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGD----LMTP-SPLVVRDSTNLEDAARLLLETKFRRLPVVDA-DGKLIGILTRGNVVRAA 154 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHH----HSEE-SCCCEETTSBHHHHHHHHTTSTTCEEEEECT-TCBEEEEEEHHHHHHHH
T ss_pred hhhhhHHHHHHHhccccccHHH----HhCC-CceEeCCCCcHHHHHHHHHHcCCCEEEEECC-CCeEEEEEEHHHHHHHH
Confidence 000 0123567888 7876 7899999999999999999999999999997 89999999999999887
Q ss_pred c
Q 013669 336 L 336 (438)
Q Consensus 336 ~ 336 (438)
.
T Consensus 155 ~ 155 (180)
T 3sl7_A 155 L 155 (180)
T ss_dssp H
T ss_pred H
Confidence 5
No 90
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.60 E-value=4.1e-15 Score=141.82 Aligned_cols=131 Identities=19% Similarity=0.303 Sum_probs=106.8
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHc-----CCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccc
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDN-----NIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFR 345 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~ 345 (438)
...++++ +|++ +++++.+++++.++++.|.++ +++++||+|+ +++++|+||.+|++.. . .
T Consensus 133 ~~~~v~~----iM~~-~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~-~~~lvGivt~~dll~~--~-------~ 197 (278)
T 2yvy_A 133 EEDEAGG----LMTP-EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE-KGRLKGVLSLRDLIVA--D-------P 197 (278)
T ss_dssp CTTBGGG----TCBS-CCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECT-TCBEEEEEEHHHHHHS--C-------T
T ss_pred CcchHHh----hcCC-CceEECCCCcHHHHHHHHHHccCCccceeEEEEECC-CCCEEEEEEHHHHhcC--C-------C
Confidence 3457888 8987 899999999999999999987 7899999997 7999999999999864 1 2
Q ss_pred cCcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcCCCCccc
Q 013669 346 QLTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFEPPNHLD 425 (438)
Q Consensus 346 ~~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e~~~~~~ 425 (438)
..++.++|.+ +++++++++++.+|++.|.+++++++||||++| +++|+||..||++.+..+....+.
T Consensus 198 ~~~v~~im~~------------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g-~lvGivT~~Dil~~i~~e~~ed~~ 264 (278)
T 2yvy_A 198 RTRVAEIMNP------------KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEG-RLVGIVTVDDVLDVLEAEATEDIH 264 (278)
T ss_dssp TCBSTTTSBS------------SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTS-BEEEEEEHHHHHHHC---------
T ss_pred CCcHHHHhCC------------CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCC-eEEEEEEHHHHHHHHHHHhHHHHH
Confidence 4578999974 889999999999999999999999999999988 999999999999999887666555
Q ss_pred ccch
Q 013669 426 NYFG 429 (438)
Q Consensus 426 ~~~~ 429 (438)
.+-+
T Consensus 265 ~~~g 268 (278)
T 2yvy_A 265 KLGA 268 (278)
T ss_dssp ----
T ss_pred HhcC
Confidence 5443
No 91
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.60 E-value=2e-15 Score=144.60 Aligned_cols=126 Identities=19% Similarity=0.317 Sum_probs=110.4
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHc-----CCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccc
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDN-----NIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFR 345 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~ 345 (438)
...++++ +|++ +++++.+++++.++++.|.++ +++++||+|+ +|+++|+||.+|++... .
T Consensus 135 ~~~~v~~----iM~~-~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~-~~~lvGivt~~dll~~~---------~ 199 (286)
T 2oux_A 135 EDETAGA----IMTT-EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQ-ENHLVGVISLRDLIVND---------D 199 (286)
T ss_dssp CTTBHHH----HCBS-CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECT-TCBEEEEEEHHHHTTSC---------T
T ss_pred ChHHHHH----hCCC-CceEECCCCcHHHHHHHHHHcccCccceeEEEEEcC-CCeEEEEEEHHHHHcCC---------C
Confidence 4568888 7987 899999999999999999998 7889999997 79999999999997541 2
Q ss_pred cCcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcCCCCcc
Q 013669 346 QLTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFEPPNHL 424 (438)
Q Consensus 346 ~~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e~~~~~ 424 (438)
..++.++|.+ +++++++++++.+|++.|.+++++++||||++| +++|+||..||++.+..+....+
T Consensus 200 ~~~v~~im~~------------~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g-~lvGiIT~~Dil~~i~~e~~ed~ 265 (286)
T 2oux_A 200 DTLIADILNE------------RVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDD-HLLGIVTVDDIIDVIDDEAASDY 265 (286)
T ss_dssp TSBHHHHSBS------------CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTC-BEEEEEEHHHHHHHHHHHHHC--
T ss_pred CCcHHHHcCC------------CCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCC-eEEEEEEHHHHHHHHHHHhHHHH
Confidence 5689999985 889999999999999999999999999999988 99999999999999875433333
No 92
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.59 E-value=1.1e-14 Score=126.12 Aligned_cols=128 Identities=18% Similarity=0.321 Sum_probs=109.4
Q ss_pred CchhhhccccC--CCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCC
Q 013669 197 TTVRSIIKSYR--WAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQP 274 (438)
Q Consensus 197 ~~v~di~~~~~--~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~ 274 (438)
.+|+++|.... ..+++++.+++++.+|+++|.+++++++||.+ + ++++|++|..|+++.+...... ....+
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~-----~~~~~ 79 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-G-DDIAGIVTERDYARKVVLQERS-----SKATR 79 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-S-SSEEEEEEHHHHHHHSGGGTCC-----SSSCB
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-C-CEEEEEEEHHHHHHHHHhccCC-----ccccC
Confidence 45899998431 15679999999999999999999999999966 4 8999999999999987653211 14568
Q ss_pred ccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCC
Q 013669 275 ISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKP 338 (438)
Q Consensus 275 v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~ 338 (438)
+++ +|.+ ++.++.+++++.++++.|.+++++++||+| +|+++|+||.+|++..+...
T Consensus 80 v~~----~m~~-~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 80 VEE----IMTA-KVRYVEPSQSTDECMALMTEHRMRHLPVLD--GGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp HHH----HSBS-SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHTT
T ss_pred HHH----HcCC-CCcEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHHHH
Confidence 888 7887 889999999999999999999999999999 69999999999999998753
No 93
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.59 E-value=1.3e-14 Score=131.90 Aligned_cols=122 Identities=11% Similarity=0.275 Sum_probs=108.9
Q ss_pred CCCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhC---CCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccc
Q 013669 193 PFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKY---RLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDI 269 (438)
Q Consensus 193 ~~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~---~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~ 269 (438)
.|...+++++|. .+++++++++|+.+|++.|.++ +++.+||+|++ ++++|+||.+|++.. .
T Consensus 50 ~~~~~~v~~iM~----~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~dll~~---~-------- 113 (205)
T 3kxr_A 50 QYSENEIGRYTD----HQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEA-DKYLGTVRRYDIFKH---E-------- 113 (205)
T ss_dssp HSCTTCGGGGCB----CCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTT-CBEEEEEEHHHHTTS---C--------
T ss_pred CCCcchHHhhcc----CceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCC-CeEEEEEEHHHHHhC---C--------
Confidence 366678999999 6799999999999999999987 89999999987 899999999998642 1
Q ss_pred cccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 270 IASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 270 l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
...++++ +|++ +++++.+++++.++++.|.++++..+||+|+ +|+++|+||..|++..+..
T Consensus 114 -~~~~v~~----im~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~-~g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 114 -PHEPLIS----LLSE-DSRALTANTTLLDAAEAIEHSREIELPVIDD-AGELIGRVTLRAATALVRE 174 (205)
T ss_dssp -TTSBGGG----GCCS-SCCCEETTSCHHHHHHHHHTSSCSEEEEECT-TSBEEEEEEHHHHHHHHHH
T ss_pred -CcchHHH----HhcC-CCeEECCCCCHHHHHHHHHhcCCCEEEEEcC-CCeEEEEEEHHHHHHHHHH
Confidence 3467889 7886 8999999999999999999999999999997 8999999999999998753
No 94
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.58 E-value=9.2e-15 Score=126.88 Aligned_cols=130 Identities=19% Similarity=0.226 Sum_probs=108.0
Q ss_pred CCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCE-EEEEcCCCCCEEEEEeHHHHHHHhhcC-----CCCCc-
Q 013669 194 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRN-VPIIEPGTPDIKNYITQSAVVQGLEGC-----KGRDW- 266 (438)
Q Consensus 194 ~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~-lpVvd~~~~~v~Giit~~Di~~~l~~~-----~~~~~- 266 (438)
+...+++++|. .+++++.+++++.+|+++|.++++++ +||+|++ +++|+||..|+++++... .....
T Consensus 13 ~~~~~v~~im~----~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 13 MKVKDVCKLIS----LKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp CBHHHHTTSSC----CCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hccccHhhccc----CCCceECCCCCHHHHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 44566999998 78999999999999999999999999 9999974 899999999999875410 00000
Q ss_pred ---ccccccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 267 ---FDIIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 267 ---~~~l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
.......++.+ +|.+ ++++.+++++.++++.|.+++++++||+|+ +|+++|+||..||+..+.
T Consensus 87 ~~~~~~~~~~~v~~----im~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 87 RSSMKRLIAKNASE----IMLD--PVYVHMDTPLEEALKLMIDNNIQEMPVVDE-KGEIVGDLNSLEILLALW 152 (157)
T ss_dssp --CCCCCSSCBHHH----HCBC--CCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHH
T ss_pred HHHHHHHcCCcHHH----HcCC--CeEECCCCCHHHHHHHHHHCCCcEEEEEcC-CCEEEEEEEHHHHHHHHH
Confidence 01224567888 6875 889999999999999999999999999997 799999999999998865
No 95
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.58 E-value=1.5e-14 Score=128.71 Aligned_cols=136 Identities=10% Similarity=0.205 Sum_probs=109.1
Q ss_pred CCCCchhhhccccCCCCceEE--eCCCCHHHHHHHHHhCCCCEEEEE--cCCCCCEEEEEeHHHHHHHhhcCCCC--Cc-
Q 013669 194 FKSTTVRSIIKSYRWAPFLPV--ATDDSMLSVLLLLSKYRLRNVPII--EPGTPDIKNYITQSAVVQGLEGCKGR--DW- 266 (438)
Q Consensus 194 ~~~~~v~di~~~~~~~~~i~v--~~~~sl~~al~~m~~~~i~~lpVv--d~~~~~v~Giit~~Di~~~l~~~~~~--~~- 266 (438)
....+++++|......+++++ .+++++.+|+++|.+++++++||+ |++ ++++|+||..|+++.+...... ..
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~-~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRES-QRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTT-CBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 445679999983322237788 999999999999999999999999 555 8999999999999887532100 00
Q ss_pred ---------------ccccccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHH
Q 013669 267 ---------------FDIIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDI 331 (438)
Q Consensus 267 ---------------~~~l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl 331 (438)
.......++.+ +|.+ +++++.+++++.++++.|.+++++++||++ +|+++|+||.+||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~----im~~-~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd--~g~~vGiit~~dl 159 (185)
T 2j9l_A 87 STSIIYFTEHSPPLPPYTPPTLKLRN----ILDL-SPFTVTDLTPMEIVVDIFRKLGLRQCLVTH--NGRLLGIITKKDV 159 (185)
T ss_dssp TTCEEECSSSCCCCCTTCCCCEECGG----GEES-SCCEEETTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHH
T ss_pred ccceeecccCCcccccccccCccHHH----hhCc-CCeEeCCCCCHHHHHHHHHhCCCcEEEEEE--CCEEEEEEEHHHH
Confidence 00123456777 7876 789999999999999999999999999999 6999999999999
Q ss_pred HHHhcC
Q 013669 332 RHLLLK 337 (438)
Q Consensus 332 ~~~l~~ 337 (438)
+..+..
T Consensus 160 l~~l~~ 165 (185)
T 2j9l_A 160 LKHIAQ 165 (185)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988753
No 96
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.58 E-value=9.7e-15 Score=136.55 Aligned_cols=140 Identities=17% Similarity=0.267 Sum_probs=102.3
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCC-CCeEEEEEeHHHHHHHhcCC----ccc-cc-
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQ-QKKIVGNVSIRDIRHLLLKP----ELF-SN- 343 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~lvGiIs~~Dl~~~l~~~----~~~-~~- 343 (438)
...++++ +|++ +++++.+++++.++.++|.+++++++||||+. +++++|+|+.+||+.++... ... ..
T Consensus 11 ~~~~v~d----iMt~-~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~ 85 (250)
T 2d4z_A 11 YNIQVGD----IMVR-DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAA 85 (250)
T ss_dssp SSCBTTS----SSBS-SCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCC
T ss_pred CCCChHH----hcCC-CCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhh
Confidence 4567889 8997 89999999999999999999999999999862 26899999999998876421 000 00
Q ss_pred -------------------------ccc----------------------------------------------------
Q 013669 344 -------------------------FRQ---------------------------------------------------- 346 (438)
Q Consensus 344 -------------------------~~~---------------------------------------------------- 346 (438)
+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (250)
T 2d4z_A 86 AEADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVAS 165 (250)
T ss_dssp CCBCCC--------------------------------------------------------------------------
T ss_pred hcccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCc
Confidence 000
Q ss_pred -----CcHHH-------HhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHH
Q 013669 347 -----LTVRD-------FMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVIS 414 (438)
Q Consensus 347 -----~~v~~-------~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~ 414 (438)
++..+ .+.... +....-....++++.++++|.+|..+|...+++++||++. | +++||||+.||++
T Consensus 166 ~~~~~i~~~~~~~~~~~~l~~~V-dl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~-G-rLVGIVTrkDl~k 242 (250)
T 2d4z_A 166 RFEEMLTLEEIYRWEQREKNVVV-NFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTSM-G-KLVGVVALAEIQA 242 (250)
T ss_dssp -CCSCCBHHHHHHHHHHHTTCBC-CTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEET-T-EEEEEEEHHHHHH
T ss_pred ccccccChhhhhhHHHHhcCcee-ccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEEC-C-EEEEEEEHHHHHH
Confidence 00000 000000 0000001246789999999999999999999999999985 5 9999999999999
Q ss_pred Hhhc
Q 013669 415 CFIF 418 (438)
Q Consensus 415 ~l~~ 418 (438)
++..
T Consensus 243 ai~~ 246 (250)
T 2d4z_A 243 AIEG 246 (250)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 9873
No 97
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.56 E-value=1.5e-14 Score=135.10 Aligned_cols=222 Identities=14% Similarity=0.169 Sum_probs=131.7
Q ss_pred CCCccCCCCC---CCCCCCHHHHHHHHHHcCCccCceecCCCCCCCCcccceeEEeehhHHHHHHHHhhHHhhhhccccc
Q 013669 44 IPVLSFPNVP---GGRDTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGT 120 (438)
Q Consensus 44 ~pvs~~p~~~---~~~~~sv~~A~~~l~~~~i~~~PV~d~~~~~~~~~~~~~iGiv~~~di~~~~l~~~~~~~~~~~~~~ 120 (438)
.+|+++...+ ..+++++.+|+++|.+++++++||+|++ ++++|+|+..||++.+............
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~--------~~l~Giit~~di~~~~~~~~~~~~~~~~--- 75 (245)
T 3l2b_A 7 LKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGN--------NHLLGMLSTSNITATYMDIWDSNILAKS--- 75 (245)
T ss_dssp CBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTT--------CBEEEEEEHHHHHHHHHCCCCTTHHHHT---
T ss_pred CcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC--------CEEEEEEEHHHHHHHHHHhhhhhhhhhc---
Confidence 4555554321 1238999999999999999999999986 4999999999999987653211110000
Q ss_pred ccccccCCcccccchhhhccCCCcchhhhhhHHHhhhhhhccccccccCCCCCccccccccchhhhhhhccCCCCCCchh
Q 013669 121 ATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPFKSTTVR 200 (438)
Q Consensus 121 ~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 200 (438)
...+..+.....+..+.|........|+ ++- ..+....+.
T Consensus 76 -----------------------~~~~~~v~~~l~~~~l~~~~~~~~~~g~------------~~i-----~a~~~~~~~ 115 (245)
T 3l2b_A 76 -----------------------ATSLDNILDTLSAEAQNINEERKVFPGK------------VVV-----AAMQAESLK 115 (245)
T ss_dssp -----------------------TCCHHHHHHHTTCEEEECCTTCCCCCSC------------EEE-----CCSCGGGGG
T ss_pred -----------------------cCCHHHHHHHhCCEEEeccCCcceeeee------------EEE-----EeCChHHHH
Confidence 0001111111111111110000000000 000 000001111
Q ss_pred hhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCC-----------CCCEEEEEeHHHHHHHhhcCCCCCcccc
Q 013669 201 SIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPG-----------TPDIKNYITQSAVVQGLEGCKGRDWFDI 269 (438)
Q Consensus 201 di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~-----------~~~v~Giit~~Di~~~l~~~~~~~~~~~ 269 (438)
+.+. ...++.+ .+ -.++...+.+.++..+++++.. .+.+..+.|..|.........
T Consensus 116 ~~~~---~~~ivIv-gd--r~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~~~~~~i~t~~d~~~~~~~~~------- 182 (245)
T 3l2b_A 116 EFIS---EGDIAIA-GD--RAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKNNITVITTPHDSFTASRLIV------- 182 (245)
T ss_dssp GTCC---TTCEEEE-CS--CHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHHHTCEEEECSSCHHHHHHHGG-------
T ss_pred hcCC---CCCEEEE-CC--CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHcCCeEEEeCCChHHHHHHHh-------
Confidence 2222 2344444 22 4788888889999999888642 123456677766654332211
Q ss_pred cccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHh
Q 013669 270 IASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLL 335 (438)
Q Consensus 270 l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l 335 (438)
...++++ +|++.+++++.+++++.+++++|.+++++++||+|+ +|+++|+||.+|++...
T Consensus 183 -~~~~v~~----im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~-~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 183 -QSLPVDY----VMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDE-NNKVVGSIARFHLISTH 242 (245)
T ss_dssp -GGSBHHH----HSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECT-TCBEEEEEECC------
T ss_pred -cCCceee----EecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcC-CCeEEEEEEHHHhhchh
Confidence 3457888 798238999999999999999999999999999997 79999999999998763
No 98
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.55 E-value=2.7e-14 Score=133.53 Aligned_cols=134 Identities=14% Similarity=0.164 Sum_probs=105.2
Q ss_pred CCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCC-CCCEEEEEeHHHHHHHhhcCC---CC--Cc--
Q 013669 195 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPG-TPDIKNYITQSAVVQGLEGCK---GR--DW-- 266 (438)
Q Consensus 195 ~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~-~~~v~Giit~~Di~~~l~~~~---~~--~~-- 266 (438)
...+|+|+|. .+++++.+++++.+|.++|.+++++++||+|++ +++++|+||..|+++++.... .. .+
T Consensus 11 ~~~~v~diMt----~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~ 86 (250)
T 2d4z_A 11 YNIQVGDIMV----RDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAA 86 (250)
T ss_dssp SSCBTTSSSB----SSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCC
T ss_pred CCCChHHhcC----CCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhh
Confidence 3457999999 789999999999999999999999999999974 268999999999998764220 00 00
Q ss_pred ------------------------c-c-----------------------------------------------------
Q 013669 267 ------------------------F-D----------------------------------------------------- 268 (438)
Q Consensus 267 ------------------------~-~----------------------------------------------------- 268 (438)
+ .
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (250)
T 2d4z_A 87 EADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASR 166 (250)
T ss_dssp CBCCC---------------------------------------------------------------------------
T ss_pred cccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcc
Confidence 0 0
Q ss_pred ---------------ccccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHH
Q 013669 269 ---------------IIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRH 333 (438)
Q Consensus 269 ---------------~l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~ 333 (438)
.....++. |.-.+|++ .++++.+++++.++..+|...|++++||++ .|+++|+||++||++
T Consensus 167 ~~~~i~~~~~~~~~~~~l~~~Vd-l~~~~md~-sP~tv~~~tsL~~v~~LF~~lglr~l~V~~--~GrLVGIVTrkDl~k 242 (250)
T 2d4z_A 167 FEEMLTLEEIYRWEQREKNVVVN-FETCRIDQ-SPFQLVEGTSLQKTHTLFSLLGLDRAYVTS--MGKLVGVVALAEIQA 242 (250)
T ss_dssp CCSCCBHHHHHHHHHHHTTCBCC-TTSSCEEC-CSCCBCTTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHH
T ss_pred cccccChhhhhhHHHHhcCceec-cccccccC-CCeEECCCCcHHHHHHHHHHhCCeEEEEEE--CCEEEEEEEHHHHHH
Confidence 00011110 00015776 889999999999999999999999999998 699999999999999
Q ss_pred Hhc
Q 013669 334 LLL 336 (438)
Q Consensus 334 ~l~ 336 (438)
++.
T Consensus 243 ai~ 245 (250)
T 2d4z_A 243 AIE 245 (250)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 99
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.50 E-value=5.6e-14 Score=145.78 Aligned_cols=127 Identities=17% Similarity=0.188 Sum_probs=109.8
Q ss_pred cccCCccccccCCCCCCCceEEcCC-CcHHHHHHHHHHcCCceEeEEe-CCCCeEEEEEeHHHHHHHhcCCccccccccC
Q 013669 270 IASQPISDLGLPFMSSDEVITIQSN-ELILEAFKRMKDNNIGGIPVVE-GQQKKIVGNVSIRDIRHLLLKPELFSNFRQL 347 (438)
Q Consensus 270 l~~~~v~~l~l~~m~~~~vv~v~~~-~~l~~a~~~m~~~~~~~lpVvd-~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~ 347 (438)
+...++++ +|++ +++++.++ +++.+++++|.+++++++||+| + +++++|+||.+||+..+.... .....
T Consensus 381 l~~~~V~d----iM~~-~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~-~g~lvGiVt~~Dll~~l~~~~---~~~~~ 451 (527)
T 3pc3_A 381 WWSLAIAE----LELP-APPVILKSDATVGEAIALMKKHRVDQLPVVDQD-DGSVLGVVGQETLITQIVSMN---RQQSD 451 (527)
T ss_dssp TTTSBGGG----GCCC-CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTT-TCCEEEEEEHHHHHHHHHHHC---CCTTS
T ss_pred ccCCcHHH----hCcC-CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECC-CCEEEEEEEHHHHHHHHHhcc---CcCCC
Confidence 34678899 7886 89999999 9999999999999999999999 6 789999999999998775321 12356
Q ss_pred cHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCC----CCeEEEEEeHHHHHHHhhcCC
Q 013669 348 TVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGE----EAEVVGVITLRDVISCFIFEP 420 (438)
Q Consensus 348 ~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~----g~~lvGvIT~~DIl~~l~~e~ 420 (438)
+|.++|++ +++++.+++++.+++++|.++++ +||||++ | +++||||++||++++....
T Consensus 452 ~V~~im~~------------~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g-~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 452 PAIKALNK------------RVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKV-ELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp BGGGGEET------------TCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCE-EEEEEEEHHHHHHHHHTCC
T ss_pred cHHHHhcC------------CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCC-eEEEEEEHHHHHHHHHhcc
Confidence 89999985 89999999999999999977664 7999985 7 9999999999999998643
No 100
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.50 E-value=1.1e-13 Score=132.44 Aligned_cols=122 Identities=15% Similarity=0.322 Sum_probs=109.4
Q ss_pred CCCCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhC-----CCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCc
Q 013669 192 EPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKY-----RLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDW 266 (438)
Q Consensus 192 ~~~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~-----~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~ 266 (438)
..+...+++++|. .+++++.+++++.+|++.|.++ +++++||+|++ ++++|+||..|+++..
T Consensus 132 l~~~~~~v~~iM~----~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~dll~~~-------- 198 (286)
T 2oux_A 132 LHYEDETAGAIMT----TEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRDLIVND-------- 198 (286)
T ss_dssp TTSCTTBHHHHCB----SCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHHHTTSC--------
T ss_pred hcCChHHHHHhCC----CCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHHHHcCC--------
Confidence 3566788999998 6799999999999999999987 88999999987 8999999999996531
Q ss_pred ccccccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 267 FDIIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 267 ~~~l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
...++.+ +|.+ +++++.+++++.++++.|.+++++++||+|+ +|+++|+||..|++..+.
T Consensus 199 ----~~~~v~~----im~~-~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 199 ----DDTLIAD----ILNE-RVISVHVGDDQEDVAQTIRDYDFLAVPVTDY-DDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp ----TTSBHHH----HSBS-CCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHH
T ss_pred ----CCCcHHH----HcCC-CCeeecCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHHHHH
Confidence 3467888 7876 8999999999999999999999999999997 899999999999998875
No 101
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.48 E-value=2.2e-13 Score=139.21 Aligned_cols=120 Identities=20% Similarity=0.318 Sum_probs=107.7
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHc-----CCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccc
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDN-----NIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFR 345 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~-----~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~ 345 (438)
...++++ +|++ +++++++++++.++++.|.++ +++++||+|+ +++++|++|.+|++.. . .
T Consensus 153 ~~~~v~~----iM~~-~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~-~~~lvGiVt~~Dll~~--~-------~ 217 (473)
T 2zy9_A 153 EEDEAGG----LMTP-EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE-KGRLKGVLSLRDLIVA--D-------P 217 (473)
T ss_dssp CTTBSTT----TCBS-CEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECT-TSBEEEEEEHHHHHHS--C-------T
T ss_pred CCCCHHH----hCCC-CceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECC-CCcEEEEEEHHHHhcC--C-------C
Confidence 4567888 8987 899999999999999999986 5789999997 7999999999999863 1 2
Q ss_pred cCcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 346 QLTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 346 ~~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
+.++.++|++ +++++++++++.++++.|.+++.+.+||||++| +++|+||.+||++.+..
T Consensus 218 ~~~v~dim~~------------~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g-~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 218 RTRVAEIMNP------------KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEG-RLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp TSBGGGTSBS------------SCCCEESSSBHHHHHHHHHHHTCSEEEEECTTS-BEEEEEEHHHHHHHHHH
T ss_pred CCcHHHHhCC------------CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCC-EEEEEEehHhhHHHHHH
Confidence 4589999974 889999999999999999999999999999998 99999999999998764
No 102
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.48 E-value=3.5e-13 Score=128.37 Aligned_cols=121 Identities=15% Similarity=0.326 Sum_probs=107.2
Q ss_pred CCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhC-----CCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCccc
Q 013669 194 FKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKY-----RLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFD 268 (438)
Q Consensus 194 ~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~-----~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~ 268 (438)
+...+++++|. .+++++.+++++.+|++.|.++ ++.++||+|.+ ++++|+||..|++.. .
T Consensus 132 ~~~~~v~~iM~----~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~dll~~---~------- 196 (278)
T 2yvy_A 132 YEEDEAGGLMT----PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVA---D------- 196 (278)
T ss_dssp SCTTBGGGTCB----SCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEHHHHHHS---C-------
T ss_pred CCcchHHhhcC----CCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCC-CCEEEEEEHHHHhcC---C-------
Confidence 55678999998 6799999999999999999987 78999999987 899999999999753 1
Q ss_pred ccccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 269 IIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 269 ~l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
...++++ +|.+ +++++++++++.++++.|.+++...+||+|+ +|+++|+||..|++..+..
T Consensus 197 --~~~~v~~----im~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 197 --PRTRVAE----IMNP-KVVYVRTDTDQEEVARLMADYDFTVLPVVDE-EGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp --TTCBSTT----TSBS-SCCCEETTSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHC--
T ss_pred --CCCcHHH----HhCC-CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeC-CCeEEEEEEHHHHHHHHHH
Confidence 3467888 7876 8999999999999999999999999999997 7999999999999988753
No 103
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.44 E-value=3.8e-13 Score=139.49 Aligned_cols=128 Identities=9% Similarity=0.180 Sum_probs=109.7
Q ss_pred CCCCCchhhhccccCCCCceEEeCC-CCHHHHHHHHHhCCCCEEEEEc-CCCCCEEEEEeHHHHHHHhhcCCCCCccccc
Q 013669 193 PFKSTTVRSIIKSYRWAPFLPVATD-DSMLSVLLLLSKYRLRNVPIIE-PGTPDIKNYITQSAVVQGLEGCKGRDWFDII 270 (438)
Q Consensus 193 ~~~~~~v~di~~~~~~~~~i~v~~~-~sl~~al~~m~~~~i~~lpVvd-~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l 270 (438)
.+...+|+++|. .+++++.++ +++.+|+++|.+++++++||+| ++ ++++|+||.+||++.+..... .
T Consensus 380 ~l~~~~V~diM~----~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~-g~lvGiVt~~Dll~~l~~~~~------~ 448 (527)
T 3pc3_A 380 WWWSLAIAELEL----PAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDD-GSVLGVVGQETLITQIVSMNR------Q 448 (527)
T ss_dssp TTTTSBGGGGCC----CCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTT-CCEEEEEEHHHHHHHHHHHCC------C
T ss_pred cccCCcHHHhCc----CCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCC-CEEEEEEEHHHHHHHHHhccC------c
Confidence 355688999998 789999999 9999999999999999999999 55 899999999999988765311 1
Q ss_pred ccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCC---CCeEEEEEeHHHHHHHhcCC
Q 013669 271 ASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQ---QKKIVGNVSIRDIRHLLLKP 338 (438)
Q Consensus 271 ~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~---~~~lvGiIs~~Dl~~~l~~~ 338 (438)
...++.+ +|++ +++++.+++++.+++++|.++++ +||+|++ +|+++|+||..||+..+.+.
T Consensus 449 ~~~~V~~----im~~-~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 449 QSDPAIK----ALNK-RVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp TTSBGGG----GEET-TCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred CCCcHHH----HhcC-CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 4568899 7887 89999999999999999977765 6999862 28999999999999998753
No 104
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.42 E-value=3.7e-14 Score=150.02 Aligned_cols=129 Identities=14% Similarity=0.096 Sum_probs=102.3
Q ss_pred cCCccccccCCCCC-CCceEEcCCCcHHHHHHHHH-HcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccc------
Q 013669 272 SQPISDLGLPFMSS-DEVITIQSNELILEAFKRMK-DNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSN------ 343 (438)
Q Consensus 272 ~~~v~~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~-~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~------ 343 (438)
..++++ +|++ +++.++++++++.++.+.|. +++++++||+|+ +++++|+||.+|++..+.+......
T Consensus 452 ~~~V~d----iM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~-~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~ 526 (632)
T 3org_A 452 EMTARE----IMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDA-NGYLLGAISRKEIVDRLQHVLEDVPEPIAGH 526 (632)
T ss_dssp TSBHHH----HCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCT-TCBBCCEESHHHHTTTTTTC-----------
T ss_pred cCcHHH----HhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEec-CCeEEEEEEHHHHHHHHHHHhhhcccccccc
Confidence 457888 7882 27899999999999999999 799999999998 8999999999999887653210000
Q ss_pred --------------ccc------------------------CcHHHHhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHH
Q 013669 344 --------------FRQ------------------------LTVRDFMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSL 385 (438)
Q Consensus 344 --------------~~~------------------------~~v~~~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m 385 (438)
... .++.++|+ ++++++++++++.+++++|
T Consensus 527 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt------------~~pitV~~~~~l~ea~~~M 594 (632)
T 3org_A 527 RTLVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCD------------VSPIVVTSYSLVRQLHFLF 594 (632)
T ss_dssp --------------------------------------------CCSCC------------CCCCEEETTCBHHHHHHHH
T ss_pred cceeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhc------------CCCceecCCCcHHHHHHHH
Confidence 000 01333443 4789999999999999999
Q ss_pred HhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 386 ASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 386 ~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
.+++++++||+ ++| +++||||++||++.+..+
T Consensus 595 ~~~~i~~lpVv-e~G-~lvGIVT~~Dll~~~~~~ 626 (632)
T 3org_A 595 VMLMPSMIYVT-ERG-KLVGIVEREDVAYGYSNS 626 (632)
T ss_dssp HHTCCSEEEEE-ETT-EEEEEEEGGGTEECCCC-
T ss_pred HhcCCCEEEEE-ECC-EEEEEEehhhHHHHHhhh
Confidence 99999999999 666 999999999999887654
No 105
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.37 E-value=2.9e-12 Score=131.72 Aligned_cols=116 Identities=23% Similarity=0.387 Sum_probs=102.7
Q ss_pred CCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCC-CCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcccCCCC
Q 013669 282 FMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQ-QKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAVVPTT 360 (438)
Q Consensus 282 ~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~~~~~~ 360 (438)
.|.. +++++.+++++.+++++|.+++++++||+|+. +++++|+||.+|++.. .....++.++|++
T Consensus 118 ~m~~-d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~--------~~~~~~V~~vM~~----- 183 (511)
T 3usb_A 118 GVIS-DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI--------QDYSIKISDVMTK----- 183 (511)
T ss_dssp CSSS-SCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC--------CCSSSBHHHHCCC-----
T ss_pred cccc-CCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh--------ccCCCcHHHhccc-----
Confidence 5665 78999999999999999999999999999841 4799999999999651 1135689999983
Q ss_pred CCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 361 PDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 361 ~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
.+++++++++++.++++.|.+++++.+||||++| +++|+||..||++.+..
T Consensus 184 ------~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g-~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 184 ------EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNG-VLQGLITIKDIEKVIEF 234 (511)
T ss_dssp ------CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTS-BEEEEEEHHHHHHHHHC
T ss_pred ------CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCC-CEeeeccHHHHHHhhhc
Confidence 2789999999999999999999999999999998 99999999999999875
No 106
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.35 E-value=4.6e-13 Score=137.19 Aligned_cols=115 Identities=23% Similarity=0.287 Sum_probs=89.5
Q ss_pred CCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhc-ccCCCC
Q 013669 282 FMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMN-AVVPTT 360 (438)
Q Consensus 282 ~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~-~~~~~~ 360 (438)
+|.. +++++.+++++.+++++|.+++++++||+|+ +++++|+||.+|++.. .....++.++|+ .
T Consensus 94 ~m~~-d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~-~~~lvGiVt~rDL~~~--------~~~~~~v~diM~p~----- 158 (496)
T 4fxs_A 94 GVVT-HPVTVRPEQTIADVMELTHYHGFAGFPVVTE-NNELVGIITGRDVRFV--------TDLTKSVAAVMTPK----- 158 (496)
T ss_dssp --CB-CCCCBCSSSBHHHHHHHHTSSCCCEEEEECS-SSBEEEEEEHHHHTTC--------CCTTSBGGGTSEEG-----
T ss_pred cccc-CceEECCCCCHHHHHHHHHHcCCcEEEEEcc-CCEEEEEEEHHHHhhc--------ccCCCcHHHHhcCC-----
Confidence 6776 8899999999999999999999999999998 7999999999999622 113568999998 3
Q ss_pred CCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 361 PDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 361 ~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
.+++++++++++.++++.|.+++++.+||||++| +++|+||++||++....
T Consensus 159 ------~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G-~l~GiIT~~DIl~~~~~ 209 (496)
T 4fxs_A 159 ------ERLATVKEGATGAEVQEKMHKARVEKILVVNDEF-QLKGMITAKDFHKAESK 209 (496)
T ss_dssp ------GGCCEEECC----CGGGTCC---CCCEEEECTTS-BCCEEECCC-----CCC
T ss_pred ------CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCC-CEEEeehHhHHHHhhcc
Confidence 2589999999999999999999999999999998 99999999999997653
No 107
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.35 E-value=4.3e-12 Score=129.63 Aligned_cols=122 Identities=15% Similarity=0.322 Sum_probs=108.8
Q ss_pred CCCCCCchhhhccccCCCCceEEeCCCCHHHHHHHHHhC-----CCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCc
Q 013669 192 EPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKY-----RLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDW 266 (438)
Q Consensus 192 ~~~~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~-----~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~ 266 (438)
..+...+++++|. .+++++++++++.+|++.|.++ +++++||+|++ ++++|++|.+|++.. .
T Consensus 150 l~~~~~~v~~iM~----~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~---~----- 216 (473)
T 2zy9_A 150 ARYEEDEAGGLMT----PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVA---D----- 216 (473)
T ss_dssp HTSCTTBSTTTCB----SCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHS---C-----
T ss_pred hcCCCCCHHHhCC----CCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCC-CcEEEEEEHHHHhcC---C-----
Confidence 3456678999999 6799999999999999999986 57899999987 899999999999762 1
Q ss_pred ccccccCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 267 FDIIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 267 ~~~l~~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
...++++ +|++ +++++++++++.++++.|.+++...+||+|+ +|+++|+||..|++..+.
T Consensus 217 ----~~~~v~d----im~~-~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe-~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 217 ----PRTRVAE----IMNP-KVVYVRTDTDQEEVARLMADYDFTVLPVVDE-EGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp ----TTSBGGG----TSBS-SCCCEESSSBHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHH
T ss_pred ----CCCcHHH----HhCC-CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcC-CCEEEEEEehHhhHHHHH
Confidence 3568899 8986 8999999999999999999999999999998 899999999999998875
No 108
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.34 E-value=1.1e-11 Score=127.42 Aligned_cols=156 Identities=21% Similarity=0.300 Sum_probs=122.4
Q ss_pred CCceEEeCCCCHHHHHHHHHhCCCCEEEEEcC--CCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCccccccCCCCCC
Q 013669 209 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEP--GTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMSSD 286 (438)
Q Consensus 209 ~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~--~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~l~l~~m~~~ 286 (438)
.+++++++++++.+++++|.+++++++||+|+ + ++++|+||.+|+.. .. . ...++++ +|++.
T Consensus 121 ~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~-~~lvGiVt~rDl~~--~~----~-----~~~~V~~----vM~~~ 184 (511)
T 3usb_A 121 SDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDE-RKLVGIITNRDMRF--IQ----D-----YSIKISD----VMTKE 184 (511)
T ss_dssp SSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTT-CBEEEEEEHHHHTT--CC----C-----SSSBHHH----HCCCC
T ss_pred cCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCC-CEEEEEEEehHhhh--hc----c-----CCCcHHH----hcccC
Confidence 56889999999999999999999999999997 5 89999999999954 11 1 4568888 78754
Q ss_pred CceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcccCCCCCCCCCC
Q 013669 287 EVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAVVPTTPDSGKV 366 (438)
Q Consensus 287 ~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~~ 366 (438)
+++++++++++.+++++|.++++..+||+|+ +|+++|+||.+|++..+..+.. +.+.+.. .
T Consensus 185 ~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe-~g~l~GiIT~~Dil~~~~~p~a--------~~D~~~r----------l 245 (511)
T 3usb_A 185 QLITAPVGTTLSEAEKILQKYKIEKLPLVDN-NGVLQGLITIKDIEKVIEFPNS--------AKDKQGR----------L 245 (511)
T ss_dssp CCCCEETTCCHHHHHHHHHHHTCSEEEEECT-TSBEEEEEEHHHHHHHHHCTTC--------CBCTTSC----------B
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEEeC-CCCEeeeccHHHHHHhhhcccc--------hhhhccc----------e
Confidence 7899999999999999999999999999998 8999999999999998764321 1122221 0
Q ss_pred CCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCC
Q 013669 367 NPPITCKLESTLGSVIHSLASKSVHRIYVVAGE 399 (438)
Q Consensus 367 ~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~ 399 (438)
.....+.......+.++.|.+.++..++|-..+
T Consensus 246 ~V~aavg~~~d~~era~aLveaGvd~I~Id~a~ 278 (511)
T 3usb_A 246 LVGAAVGVTADAMTRIDALVKASVDAIVLDTAH 278 (511)
T ss_dssp CCEEEECSSTTHHHHHHHHHHTTCSEEEEECSC
T ss_pred eeeeeeeeccchHHHHHHHHhhccceEEecccc
Confidence 122344445455666778888898887665444
No 109
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.32 E-value=1.5e-13 Score=141.41 Aligned_cols=116 Identities=10% Similarity=0.162 Sum_probs=0.0
Q ss_pred CCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCC---CeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcccCCC
Q 013669 283 MSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQ---KKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAVVPT 359 (438)
Q Consensus 283 m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~---~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~~~~~ 359 (438)
|.+ +++++.+++++.+++++|.+++++++||+|+ + ++++|+||.+|++.. . .....++.++|++.
T Consensus 103 M~~-~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~-~~~~g~lvGiVt~~Dl~~~--~-----~~~~~~V~diM~~~--- 170 (503)
T 1me8_A 103 FVV-SDSNVKPDQTFADVLAISQRTTHNTVAVTDD-GTPHGVLLGLVTQRDYPID--L-----TQTETKVSDMMTPF--- 170 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccc-CCeEECCCCcHHHHHHHHHHcCceEEEEEEC-CCcCCeEEEEEEHHHHHhh--h-----ccccCcHHHHhCCC---
Confidence 776 8999999999999999999999999999996 5 899999999999864 1 11356899999840
Q ss_pred CCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 360 TPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 360 ~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
.+++++++++++.+|+++|.+++++++||||++| +++|+||.+||++.+..
T Consensus 171 -------~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g-~lvGiIT~~Dil~~~~~ 221 (503)
T 1me8_A 171 -------SKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQ-HLRYIVFRKDYDRSQVC 221 (503)
T ss_dssp -----------------------------------------------------------
T ss_pred -------CCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCC-eEEEEEEecHHHHhhhc
Confidence 1289999999999999999999999999999988 99999999999998874
No 110
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.32 E-value=1.2e-12 Score=138.44 Aligned_cols=132 Identities=16% Similarity=0.071 Sum_probs=105.0
Q ss_pred CCCchhhhccccCCCCceEEeCCCCHHHHHHHHH-hCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCc-------
Q 013669 195 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLS-KYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDW------- 266 (438)
Q Consensus 195 ~~~~v~di~~~~~~~~~i~v~~~~sl~~al~~m~-~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~------- 266 (438)
...+|+|+|... +++.++++++++.++.+.|. +++++++||+|++ ++++|+||.+|+.+.+........
T Consensus 451 ~~~~V~diM~p~--~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~-~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~ 527 (632)
T 3org_A 451 PEMTAREIMHPI--EGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDAN-GYLLGAISRKEIVDRLQHVLEDVPEPIAGHR 527 (632)
T ss_dssp TTSBHHHHCBCT--TTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTT-CBBCCEESHHHHTTTTTTC------------
T ss_pred ccCcHHHHhhcC--CCceEecCCCcHHHHHHHHHhcCCcceEEEEecC-CeEEEEEEHHHHHHHHHHHhhhccccccccc
Confidence 567899999832 56899999999999999999 7999999999986 899999999999887654310000
Q ss_pred -------------ccccc---------------------cCCccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceE
Q 013669 267 -------------FDIIA---------------------SQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGI 312 (438)
Q Consensus 267 -------------~~~l~---------------------~~~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~l 312 (438)
..... ..++++ +|++ +++++++++++.++.+.|.+++++++
T Consensus 528 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~----iMt~-~pitV~~~~~l~ea~~~M~~~~i~~l 602 (632)
T 3org_A 528 TLVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVV----PCDV-SPIVVTSYSLVRQLHFLFVMLMPSMI 602 (632)
T ss_dssp -------------------------------------------CC----SCCC-CCCEEETTCBHHHHHHHHHHTCCSEE
T ss_pred ceeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccch----hhcC-CCceecCCCcHHHHHHHHHhcCCCEE
Confidence 00000 012566 7887 88999999999999999999999999
Q ss_pred eEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 313 PVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 313 pVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
||++ +|+++|+||.+|+++.+.
T Consensus 603 pVve--~G~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 603 YVTE--RGKLVGIVEREDVAYGYS 624 (632)
T ss_dssp EEEE--TTEEEEEEEGGGTEECCC
T ss_pred EEEE--CCEEEEEEehhhHHHHHh
Confidence 9995 799999999999976644
No 111
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.32 E-value=7.3e-12 Score=128.83 Aligned_cols=115 Identities=21% Similarity=0.384 Sum_probs=103.1
Q ss_pred CCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEe--CCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcccCCC
Q 013669 282 FMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVE--GQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAVVPT 359 (438)
Q Consensus 282 ~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~~~~~ 359 (438)
+|.+ +++++.+++++.++++.|.+++++++||+| + +++++|+||.+|++... + ...++.++|++
T Consensus 95 im~~-~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~-~~~lvGivt~~Dl~~~~-~-------~~~~v~~im~~---- 160 (491)
T 1zfj_A 95 GVII-DPFFLTPEHKVSEAEELMQRYRISGVPIVETLA-NRKLVGIITNRDMRFIS-D-------YNAPISEHMTS---- 160 (491)
T ss_dssp TTSS-SCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTT-TCBEEEEEEHHHHHHCS-C-------SSSBTTTSCCC----
T ss_pred cCcC-CCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCC-CCEEEEEEEHHHHhhhc-c-------CCCcHHHHcCC----
Confidence 6887 889999999999999999999999999998 6 79999999999998641 1 25678899872
Q ss_pred CCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 360 TPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 360 ~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
.+++++++++++.++++.|.+++++++||||++| +++|+||..||++.+..
T Consensus 161 -------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g-~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 161 -------EHLVTAAVGTDLETAERILHEHRIEKLPLVDNSG-RLSGLITIKDIEKVIEF 211 (491)
T ss_dssp -------SCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTS-BEEEEEEHHHHHHHHHC
T ss_pred -------CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCC-cEEEEEEHHHHHHHHhc
Confidence 1688999999999999999999999999999998 99999999999999874
No 112
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.27 E-value=4.9e-13 Score=137.58 Aligned_cols=152 Identities=13% Similarity=0.148 Sum_probs=19.3
Q ss_pred CCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCC--CCCEEEEEeHHHHHHHhhcCCCCCcccccccCCccccccCCCCCC
Q 013669 209 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPG--TPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMSSD 286 (438)
Q Consensus 209 ~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~--~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~l~l~~m~~~ 286 (438)
.+++++++++++.+++++|.+++++++||+|++ .++++|+||.+|+.+. .. ....++++ +|++
T Consensus 105 ~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-~~---------~~~~~V~d----iM~~- 169 (503)
T 1me8_A 105 VSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-LT---------QTETKVSD----MMTP- 169 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-hc---------cccCcHHH----HhCC-
Confidence 578999999999999999999999999999964 2689999999999763 11 14568888 7886
Q ss_pred C--ceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcccCCCCCCCC
Q 013669 287 E--VITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAVVPTTPDSG 364 (438)
Q Consensus 287 ~--vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~~~~~~~~~~ 364 (438)
+ ++++++++++.+++++|.+++++.+||+|+ +|+++|+||.+||+..+..+.. ..+.+..
T Consensus 170 ~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe-~g~lvGiIT~~Dil~~~~~~~~--------~~d~~~~--------- 231 (503)
T 1me8_A 170 FSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD-DQHLRYIVFRKDYDRSQVCHNE--------LVDSQKR--------- 231 (503)
T ss_dssp -----------------------------------------------------CCC--------CBCTTSC---------
T ss_pred CCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC-CCeEEEEEEecHHHHhhhcccc--------hhccccc---------
Confidence 5 999999999999999999999999999998 8999999999999988653221 1111110
Q ss_pred CCCCCeEeCCCCCHHHHHHHHHhCCCCEEEE
Q 013669 365 KVNPPITCKLESTLGSVIHSLASKSVHRIYV 395 (438)
Q Consensus 365 ~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~V 395 (438)
......+.. ....+.++.|.+.+++.+.|
T Consensus 232 -l~v~a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 232 -YLVGAGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp -BCCEEEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred -cccccccCc-hhHHHHHHHHHhhhccceEE
Confidence 001133444 56667788899989887655
No 113
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.25 E-value=5.6e-13 Score=136.45 Aligned_cols=115 Identities=23% Similarity=0.351 Sum_probs=0.4
Q ss_pred CCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcccCCCCC
Q 013669 282 FMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAVVPTTP 361 (438)
Q Consensus 282 ~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~~~~~~~ 361 (438)
+|.. +++++.+++++.+++++|.+++++++||+| +++++|+||.+|++... ....++.++|++.
T Consensus 93 ~m~~-~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd--~g~lvGIVt~rDl~~~~--------~~~~~V~~vMtp~----- 156 (490)
T 4avf_A 93 AIVR-DPVTVTPSTKIIELLQMAREYGFSGFPVVE--QGELVGIVTGRDLRVKP--------NAGDTVAAIMTPK----- 156 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred Cccc-CceEeCCCCcHHHHHHHHHHhCCCEEEEEE--CCEEEEEEEhHHhhhcc--------ccCCcHHHHhccC-----
Confidence 6776 789999999999999999999999999999 68999999999996431 1356899999820
Q ss_pred CCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 362 DSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 362 ~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
.+++++++++++.+++++|.+++++.+||||++| +++|+||++||++....
T Consensus 157 -----~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g-~lvGiIT~~Dil~~~~~ 207 (490)
T 4avf_A 157 -----DKLVTAREGTPLEEMKAKLYENRIEKMLVVDENF-YLRGLVTFRDIEKAKTY 207 (490)
T ss_dssp --------------------------------------------------------C
T ss_pred -----CCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCC-cEEEEEehHHhhhhccC
Confidence 2589999999999999999999999999999998 99999999999998653
No 114
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.23 E-value=8.7e-13 Score=135.78 Aligned_cols=117 Identities=24% Similarity=0.422 Sum_probs=6.3
Q ss_pred CCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcccCCCCC
Q 013669 282 FMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAVVPTTP 361 (438)
Q Consensus 282 ~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~~~~~~~ 361 (438)
+|.+ +++++.+++++.++++.|.+++++.+||+|+ +++++|+||.+|++... . ...++.++|++.
T Consensus 100 iM~~-~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~lvGivt~~Dl~~~~---~-----~~~~v~~im~~~----- 164 (494)
T 1vrd_A 100 GIIY-DPITVTPDMTVKEAIDLMAEYKIGGLPVVDE-EGRLVGLLTNRDVRFEK---N-----LSKKIKDLMTPR----- 164 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcc-CCeEECCCCCHHHHHHHHHHcCceEEEEEcC-CCEEEEEEEHHHHHhhc---C-----CCCcHHHHhCCC-----
Confidence 6876 8999999999999999999999999999997 78999999999998631 1 246899999720
Q ss_pred CCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhcC
Q 013669 362 DSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIFE 419 (438)
Q Consensus 362 ~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~e 419 (438)
.+++++++++++.+++++|.+++++++||||++| +++|+||..||++.+..+
T Consensus 165 -----~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g-~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 165 -----EKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDN-KLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp --------------------------------------------------CHHHHTCT
T ss_pred -----CCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCC-eEEEEEEHHHHHhhhccc
Confidence 2689999999999999999999999999999998 999999999999998753
No 115
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.22 E-value=9.8e-13 Score=132.10 Aligned_cols=110 Identities=15% Similarity=0.265 Sum_probs=0.4
Q ss_pred CceEEcCCCcHHHHHHHHHHcCCceEeEEeCC--CCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcccCCCCCCCC
Q 013669 287 EVITIQSNELILEAFKRMKDNNIGGIPVVEGQ--QKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAVVPTTPDSG 364 (438)
Q Consensus 287 ~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~--~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~~~~~~~~~~ 364 (438)
+++++.++.++.+++++|.+++++.+||+++. +++++||||.+|+... + ...+|.++|++
T Consensus 147 dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d-------~~~~V~evMT~--------- 208 (556)
T 4af0_A 147 DPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--D-------AETPIKSVMTT--------- 208 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--c-------cceEhhhhccc---------
Confidence 68999999999999999999999999999852 4689999999998653 2 24589999985
Q ss_pred CCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 365 KVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 365 ~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
++++++...++.+|.++|.++++..+||||+++ +++|+||++||++.-..
T Consensus 209 ---~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g-~LvGlIT~kDi~k~~~~ 258 (556)
T 4af0_A 209 ---EVVTGSSPITLEKANSLLRETKKGKLPIVDSNG-HLVSLVARSDLLKNQNY 258 (556)
T ss_dssp -----------------------------------------------------C
T ss_pred ---ceEEecCCCCHHHHHHHHHHccccceeEEccCC-cEEEEEEechhhhhhhC
Confidence 799999999999999999999999999999998 99999999999987653
No 116
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.19 E-value=1e-10 Score=120.20 Aligned_cols=118 Identities=19% Similarity=0.321 Sum_probs=103.7
Q ss_pred hhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEc--CCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCcc
Q 013669 199 VRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIE--PGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPIS 276 (438)
Q Consensus 199 v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd--~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~ 276 (438)
+.++|. .+++++.+++++.+++++|.+++++++||+| ++ ++++|+||.+|+++.. . ...+++
T Consensus 92 ~~~im~----~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~-~~lvGivt~~Dl~~~~--~---------~~~~v~ 155 (491)
T 1zfj_A 92 SENGVI----IDPFFLTPEHKVSEAEELMQRYRISGVPIVETLAN-RKLVGIITNRDMRFIS--D---------YNAPIS 155 (491)
T ss_dssp HTTTTS----SSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTT-CBEEEEEEHHHHHHCS--C---------SSSBTT
T ss_pred HHhcCc----CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCC-CEEEEEEEHHHHhhhc--c---------CCCcHH
Confidence 456777 6789999999999999999999999999999 55 8999999999997531 1 356788
Q ss_pred ccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 277 DLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 277 ~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
+ +|++++++++++++++.++++.|.+++++.+||+|. +++++|++|..|++..+..
T Consensus 156 ~----im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~-~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 156 E----HMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDN-SGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp T----SCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECT-TSBEEEEEEHHHHHHHHHC
T ss_pred H----HcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEEHHHHHHHHhc
Confidence 8 787436889999999999999999999999999998 8999999999999998874
No 117
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.15 E-value=1.5e-11 Score=125.92 Aligned_cols=116 Identities=15% Similarity=0.232 Sum_probs=88.6
Q ss_pred hhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCccccc
Q 013669 200 RSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLG 279 (438)
Q Consensus 200 ~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~l~ 279 (438)
.++|. .+++++++++++.+++++|.+++++++||+|++ ++++|+||.+|+.. . .. ...++.+
T Consensus 92 ~~~m~----~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~-~~lvGiVt~rDL~~---~---~~-----~~~~v~d-- 153 (496)
T 4fxs_A 92 EAGVV----THPVTVRPEQTIADVMELTHYHGFAGFPVVTEN-NELVGIITGRDVRF---V---TD-----LTKSVAA-- 153 (496)
T ss_dssp CC--C----BCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSS-SBEEEEEEHHHHTT---C---CC-----TTSBGGG--
T ss_pred ccccc----cCceEECCCCCHHHHHHHHHHcCCcEEEEEccC-CEEEEEEEHHHHhh---c---cc-----CCCcHHH--
Confidence 44565 678999999999999999999999999999986 89999999999851 1 11 4567889
Q ss_pred cCCCC-CCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 280 LPFMS-SDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 280 l~~m~-~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
+|+ .++++++++++++.+++++|.++++..+||+|+ +|+++|+||.+|+++...
T Consensus 154 --iM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 154 --VMTPKERLATVKEGATGAEVQEKMHKARVEKILVVND-EFQLKGMITAKDFHKAES 208 (496)
T ss_dssp --TSEEGGGCCEEECC----CGGGTCC---CCCEEEECT-TSBCCEEECCC-----CC
T ss_pred --HhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCCEEEeehHhHHHHhhc
Confidence 788 435899999999999999999999999999998 899999999999998754
No 118
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.13 E-value=1.2e-11 Score=126.45 Aligned_cols=117 Identities=18% Similarity=0.284 Sum_probs=1.8
Q ss_pred hhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCcccc
Q 013669 199 VRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDL 278 (438)
Q Consensus 199 v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~l 278 (438)
+.++|. .+++++++++++.+++++|.+++++++||+| + ++++|+||.+|+.... ....++++
T Consensus 90 ~~~~m~----~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~-g~lvGIVt~rDl~~~~-----------~~~~~V~~- 151 (490)
T 4avf_A 90 HETAIV----RDPVTVTPSTKIIELLQMAREYGFSGFPVVE-Q-GELVGIVTGRDLRVKP-----------NAGDTVAA- 151 (490)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred cccCcc----cCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-C-CEEEEEEEhHHhhhcc-----------ccCCcHHH-
Confidence 445666 6688999999999999999999999999999 5 8999999999984211 13568888
Q ss_pred ccCCCC-CCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 279 GLPFMS-SDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 279 ~l~~m~-~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
+|+ .++++++++++++.+++++|.++++..+||+|+ +|+++|+||.+|+++....
T Consensus 152 ---vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-~g~lvGiIT~~Dil~~~~~ 207 (490)
T 4avf_A 152 ---IMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDE-NFYLRGLVTFRDIEKAKTY 207 (490)
T ss_dssp -----------------------------------------------------------C
T ss_pred ---HhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEehHHhhhhccC
Confidence 788 336999999999999999999999999999998 8999999999999988643
No 119
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.09 E-value=2.4e-11 Score=125.03 Aligned_cols=119 Identities=20% Similarity=0.373 Sum_probs=6.4
Q ss_pred hhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCcccc
Q 013669 199 VRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDL 278 (438)
Q Consensus 199 v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~l 278 (438)
+.++|. .+++++.+++++.+|+++|.+++++.+||+|++ ++++|+||..|+.+.- . ...++.+
T Consensus 97 ~~~iM~----~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~~------~-----~~~~v~~- 159 (494)
T 1vrd_A 97 TENGII----YDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFEK------N-----LSKKIKD- 159 (494)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred HhhcCc----cCCeEECCCCCHHHHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhhc------C-----CCCcHHH-
Confidence 456777 679999999999999999999999999999976 8999999999997521 0 3467888
Q ss_pred ccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCC
Q 013669 279 GLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKP 338 (438)
Q Consensus 279 ~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~ 338 (438)
+|++ ++++++.+++++.+++++|.++++..+||+|+ +|+++|+||..|++..+..+
T Consensus 160 ---im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 160 ---LMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSK-DNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp -----------------------------------------------------CHHHHTCT
T ss_pred ---HhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHhhhccc
Confidence 7873 36899999999999999999999999999998 89999999999999987643
No 120
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.07 E-value=2.8e-12 Score=132.59 Aligned_cols=123 Identities=17% Similarity=0.224 Sum_probs=70.3
Q ss_pred CccccccCCCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCC--CCeEEEEEeHHHHHHHhcCCccccccccCcHHH
Q 013669 274 PISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQ--QKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRD 351 (438)
Q Consensus 274 ~v~~l~l~~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~--~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~ 351 (438)
++.+ +|.+ +++++.+++++.+++++|.+++++.+||+|++ +++++|+||.+|++.... .....++.+
T Consensus 109 ~~~~----im~~-~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~------~~~~~~v~~ 177 (514)
T 1jcn_A 109 NFEQ----GFIT-DPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE------KDHTTLLSE 177 (514)
T ss_dssp TCCT----TSCS-SCCCCCC-----------------CEESCC--------CCEECTTTTC-------------------
T ss_pred hhhh----cccc-CCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhh------ccCCCCHHH
Confidence 4556 6776 78899999999999999999999999999852 389999999999976421 013568899
Q ss_pred HhcccCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 352 FMNAVVPTTPDSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 352 ~m~~~~~~~~~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
+|.+ ..+++++++++++.+++++|.+++++++||||++| +++|+||++||++.+..
T Consensus 178 vm~~----------~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g-~lvGiIt~~Dll~~~~~ 233 (514)
T 1jcn_A 178 VMTP----------RIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCD-ELVAIIARTDLKKNRDY 233 (514)
T ss_dssp ---C----------CBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSS-CCC----CCCCSSCCCC
T ss_pred HhCC----------CCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCC-eEEEEEEHHHHHHHhhC
Confidence 9972 01689999999999999999999999999999988 99999999999987753
No 121
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.07 E-value=4.4e-10 Score=83.41 Aligned_cols=65 Identities=25% Similarity=0.369 Sum_probs=55.3
Q ss_pred CceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcc
Q 013669 287 EVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNA 355 (438)
Q Consensus 287 ~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~ 355 (438)
+++++.+++++.+|+++|.+++++++||+| +|+++|++|.+|+++.+..... .+.+.+++++|++
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d--~~~lvGIvT~~Di~~~~~~~~~--~~~~~~V~~iMt~ 65 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME--GDEILGVVTERDILDKVVAKGK--NPKEVKVEEIMTK 65 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHTTTTTC--CGGGCBGGGTCEE
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHHhcCC--CcccCCHHHhcCC
Confidence 368999999999999999999999999998 6899999999999876543222 3456789999996
No 122
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.04 E-value=2.3e-11 Score=124.80 Aligned_cols=110 Identities=27% Similarity=0.439 Sum_probs=0.5
Q ss_pred CCCCCCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcccCCCCC
Q 013669 282 FMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAVVPTTP 361 (438)
Q Consensus 282 ~m~~~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~~~~~~~ 361 (438)
.|.. +++++.+++++.++++.|.+++++++||+++ ++++|+|+.+|++. + ...++.++|.+
T Consensus 98 ~m~~-~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~--~~lvGivt~~Dl~~---~-------~~~~v~~im~~------ 158 (486)
T 2cu0_A 98 LIVE-DVITIAPDETVDFALFLMEKHGIDGLPVVED--EKVVGIITKKDIAA---R-------EGKLVKELMTK------ 158 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccc-CceEECCCCCHHHHHHHHHHcCCcEEEEEEC--CEEEEEEEHHHhcc---C-------CCCCHHHHccC------
Confidence 4665 8899999999999999999999999999984 89999999999975 1 24579999985
Q ss_pred CCCCCCCCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhh
Q 013669 362 DSGKVNPPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFI 417 (438)
Q Consensus 362 ~~~~~~~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~ 417 (438)
+++++++++++.++++.|.+++++.+||||++| +++|+||.+||++.+.
T Consensus 159 ------~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g-~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 159 ------EVITVPESIEVEEALKIMIENRIDRLPVVDERG-KLVGLITMSDLVARKK 207 (486)
T ss_dssp -------------------------------------------------------C
T ss_pred ------CCeEECCcCcHHHHHHHHHHcCCCEEEEEecCC-eEEEEEEHHHHHHhhh
Confidence 789999999999999999999999999999988 9999999999999865
No 123
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.01 E-value=3.5e-11 Score=120.90 Aligned_cols=110 Identities=25% Similarity=0.311 Sum_probs=0.0
Q ss_pred CCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCC--CCCEEEEEeHHHHHHHhhcCCCCCcccccccCCccccccCCCCCC
Q 013669 209 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPG--TPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMSSD 286 (438)
Q Consensus 209 ~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~--~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~l~l~~m~~~ 286 (438)
..++++.|+.|+.+|+++|.+++++.+||+|+. +++++||||.+|+. +- . ...++++ +|++
T Consensus 146 ~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~r-f~--d---------~~~~V~e----vMT~- 208 (556)
T 4af0_A 146 TDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQ-FQ--D---------AETPIKS----VMTT- 208 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccc-cc--c---------cceEhhh----hccc-
Confidence 358899999999999999999999999999863 37999999999973 21 1 3568999 8997
Q ss_pred CceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhc
Q 013669 287 EVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLL 336 (438)
Q Consensus 287 ~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~ 336 (438)
++++++++.++.+|.++|.++++..+||||+ +++++|+||.+|+.+...
T Consensus 209 ~lvt~~~~~~leeA~~iL~~~kieklpVVd~-~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 209 EVVTGSSPITLEKANSLLRETKKGKLPIVDS-NGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp --------------------------------------------------
T ss_pred ceEEecCCCCHHHHHHHHHHccccceeEEcc-CCcEEEEEEechhhhhhh
Confidence 8999999999999999999999999999998 899999999999987653
No 124
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.96 E-value=1.1e-10 Score=119.69 Aligned_cols=158 Identities=23% Similarity=0.312 Sum_probs=23.1
Q ss_pred CCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCccccccCCCCCCCc
Q 013669 209 APFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMSSDEV 288 (438)
Q Consensus 209 ~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~l~l~~m~~~~v 288 (438)
.+++++.+++++.+++++|.+++++++||+|+ ++++|+||.+|++. . ...++.+ +|++ ++
T Consensus 101 ~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~--~~lvGivt~~Dl~~----~---------~~~~v~~----im~~-~~ 160 (486)
T 2cu0_A 101 EDVITIAPDETVDFALFLMEKHGIDGLPVVED--EKVVGIITKKDIAA----R---------EGKLVKE----LMTK-EV 160 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCceEECCCCCHHHHHHHHHHcCCcEEEEEEC--CEEEEEEEHHHhcc----C---------CCCCHHH----HccC-CC
Confidence 57899999999999999999999999999997 79999999999875 1 3457888 7886 78
Q ss_pred eEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcccCCCCCCCCCCCC
Q 013669 289 ITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAVVPTTPDSGKVNP 368 (438)
Q Consensus 289 v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~~~~ 368 (438)
+++++++++.++++.|.+++++.+||+|+ +++++|++|.+||+.....+.. ..+.+.. ..-
T Consensus 161 ~~v~~~~~l~eal~~m~~~~~~~lpVVde-~g~lvGiiT~~Dil~~~~~~~~--------~~~~~g~----------~~v 221 (486)
T 2cu0_A 161 ITVPESIEVEEALKIMIENRIDRLPVVDE-RGKLVGLITMSDLVARKKYKNA--------VRDENGE----------LLV 221 (486)
T ss_dssp -----------------------------------------------CCTTC--------CBCTTSC----------BCC
T ss_pred eEECCcCcHHHHHHHHHHcCCCEEEEEec-CCeEEEEEEHHHHHHhhhcccc--------ccccCCc----------eee
Confidence 99999999999999999999999999997 8999999999999988542211 0010000 000
Q ss_pred CeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEe
Q 013669 369 PITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVIT 408 (438)
Q Consensus 369 ~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT 408 (438)
...+..++ .+.+..|.+.++..+ |++..+|+..++++
T Consensus 222 ~~~~~~~~--~~~a~~l~~~gvd~l-vvdta~G~~~~~L~ 258 (486)
T 2cu0_A 222 AAAVSPFD--IKRAIELDKAGVDVI-VVDTAHAHNLKAIK 258 (486)
T ss_dssp EEEECTTC--HHHHHHHHHTTCSEE-EEECSCCCCHHHHH
T ss_pred cceechhh--HHHHHHHHHhcCCce-EEEecCCcEeehhh
Confidence 11233333 566778889998875 66643335555443
No 125
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.95 E-value=1.6e-09 Score=80.27 Aligned_cols=68 Identities=13% Similarity=0.223 Sum_probs=56.2
Q ss_pred ceEEeCCCCHHHHHHHHHhCCCCEEEEEcCCCCCEEEEEeHHHHHHHhhcCCCCCcccccccCCccccccCCCCCCCceE
Q 013669 211 FLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMSSDEVIT 290 (438)
Q Consensus 211 ~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~~l~l~~m~~~~vv~ 290 (438)
++++.|++++.+|+++|.+++++++||+|+ ++++||+|.+|+++.+.... . .....++++ +|++ ++++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~~~~-~----~~~~~~V~~----iMt~-~~iT 69 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKG-K----NPKEVKVEE----IMTK-NPVK 69 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTT-C----CGGGCBGGG----TCEE-CTTC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHhcC-C----CcccCCHHH----hcCC-CCeE
Confidence 689999999999999999999999999985 79999999999987664321 1 124568999 8987 6654
No 126
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.86 E-value=9.3e-11 Score=121.12 Aligned_cols=121 Identities=15% Similarity=0.178 Sum_probs=68.7
Q ss_pred hhhhccccCCCCceEEeCCCCHHHHHHHHHhCCCCEEEEEcCC--CCCEEEEEeHHHHHHHhhcCCCCCcccccccCCcc
Q 013669 199 VRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPG--TPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPIS 276 (438)
Q Consensus 199 v~di~~~~~~~~~i~v~~~~sl~~al~~m~~~~i~~lpVvd~~--~~~v~Giit~~Di~~~l~~~~~~~~~~~l~~~~v~ 276 (438)
+.++|. .+++++.+++++.+|+++|.+++++.+||+|++ +++++|+||..|+.+... .....++.
T Consensus 110 ~~~im~----~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~---------~~~~~~v~ 176 (514)
T 1jcn_A 110 FEQGFI----TDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE---------KDHTTLLS 176 (514)
T ss_dssp CCTTSC----SSCCCCCC-----------------CEESCC--------CCEECTTTTC---------------------
T ss_pred hhhccc----cCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhh---------ccCCCCHH
Confidence 556776 668899999999999999999999999999973 379999999999865311 01346788
Q ss_pred ccccCCCCC-CCceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcC
Q 013669 277 DLGLPFMSS-DEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 337 (438)
Q Consensus 277 ~l~l~~m~~-~~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~ 337 (438)
+ +|++ ++++++.+++++.+++++|.++++..+||+|+ +|+++|+||.+|++..+..
T Consensus 177 ~----vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~-~g~lvGiIt~~Dll~~~~~ 233 (514)
T 1jcn_A 177 E----VMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVND-CDELVAIIARTDLKKNRDY 233 (514)
T ss_dssp --------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESS-SSCCC----CCCCSSCCCC
T ss_pred H----HhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECC-CCeEEEEEEHHHHHHHhhC
Confidence 8 7763 26899999999999999999999999999998 8999999999999876543
No 127
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.66 E-value=8.4e-08 Score=70.51 Aligned_cols=65 Identities=25% Similarity=0.369 Sum_probs=54.9
Q ss_pred CceEEcCCCcHHHHHHHHHHcCCceEeEEeCCCCeEEEEEeHHHHHHHhcCCccccccccCcHHHHhcc
Q 013669 287 EVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNA 355 (438)
Q Consensus 287 ~vv~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~lvGiIs~~Dl~~~l~~~~~~~~~~~~~v~~~m~~ 355 (438)
+++++.+++++.++++.|.+++++++||+| +++++|+||.+|++..+..... .....++.++|++
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d--~~~l~Givt~~dl~~~~~~~~~--~~~~~~v~~im~~ 65 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME--GDEILGVVTERDILDKVVAKGK--NPKEVKVEEIMTK 65 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE--TTEEEEEEEHHHHHHHTTTTTC--CGGGCBGGGTCEE
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEE--CCEEEEEEEHHHHHHHHHHcCC--CcccCCHHHhcCC
Confidence 367899999999999999999999999999 4899999999999998754321 1246689999985
No 128
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.58 E-value=1.5e-07 Score=69.17 Aligned_cols=49 Identities=24% Similarity=0.424 Sum_probs=45.6
Q ss_pred CCeEeCCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHHHhhc
Q 013669 368 PPITCKLESTLGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVISCFIF 418 (438)
Q Consensus 368 ~~~~v~~~~tL~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~~l~~ 418 (438)
+++++.+++++.+|++.|.+++++++||+|+ | +++|+||.+||++.+..
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~-~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-D-EILGVVTERDILDKVVA 49 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-T-EEEEEEEHHHHHHHTTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-C-EEEEEEEHHHHHHHHHH
Confidence 3578999999999999999999999999998 6 99999999999998865
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=39.61 E-value=41 Score=24.50 Aligned_cols=26 Identities=4% Similarity=0.258 Sum_probs=22.3
Q ss_pred CCEEEEEeCCCCeEEEEEeHHHHHHHh
Q 013669 390 VHRIYVVAGEEAEVVGVITLRDVISCF 416 (438)
Q Consensus 390 i~~l~VVd~~g~~lvGvIT~~DIl~~l 416 (438)
...+-++|++| ..+|+++..+.++..
T Consensus 13 ~~eVrli~~~G-e~lGv~~~~eAl~~A 38 (78)
T 1tif_A 13 AREVRLIDQNG-DQLGIKSKQEALEIA 38 (78)
T ss_dssp CSEEEEECTTS-CEEEEEEHHHHHHHH
T ss_pred CCEEEEECCCC-cCCCcccHHHHHHHH
Confidence 35677999998 999999999999854
No 130
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=21.59 E-value=39 Score=28.04 Aligned_cols=35 Identities=29% Similarity=0.592 Sum_probs=28.2
Q ss_pred HHHHHHHHHhCCCCEEEEEeCCCCeEEEEEeHHHHHH
Q 013669 378 LGSVIHSLASKSVHRIYVVAGEEAEVVGVITLRDVIS 414 (438)
Q Consensus 378 L~ea~~~m~~~~i~~l~VVd~~g~~lvGvIT~~DIl~ 414 (438)
+.+.++.+...+..-++|..+ + +++|+|...|.++
T Consensus 121 ~~~~~~~la~~G~T~v~VA~d-~-~l~GvIalaD~iK 155 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVEG-S-RVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEET-T-EEEEEEEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEEEEC-C-EEEEEEEEecCCC
Confidence 778888888888777777754 5 9999999988653
Done!