BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013673
(438 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 176/374 (47%), Gaps = 22/374 (5%)
Query: 51 LPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSK 110
+P G G P +GE+L F++ F KR+ +G +FK+ +FG I + A ++
Sbjct: 13 IPPGDFGLPWLGETLNFLNDG------DFGKKRQQQFGPIFKTRLFGKNVIFISGALANR 66
Query: 111 FVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDME 170
F+ + + F +P S L+G +++ G + R ++ F L + + + M+
Sbjct: 67 FLFTKEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPK-MD 125
Query: 171 KYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSL 230
+ +E W + + + + + F V + + Q L F+ +I GL SL
Sbjct: 126 GIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFMG-EKVSQNPQLFPWFETYIQGLFSL 184
Query: 231 PINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMM-NNASDQPLT 289
PI +P + +S +A+ + +++II++++ S +D + +L+ + ++QPL+
Sbjct: 185 PIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSE----EDALGILLAARDDNNQPLS 240
Query: 290 DDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTD--ENIKLKELKAQLGEPL 347
+ D ++ ++ G +++ LS + L Q +D E ++ ++ K QL + L
Sbjct: 241 LPELKDQILLLLFAGHETL-------TSALSSFCLLLGQHSDIRERVRQEQNKLQLSQEL 293
Query: 348 SWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDE 407
+ +P+ V+ E LR+ + G R+ ++D + +G+ PKGW H D
Sbjct: 294 TAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADP 353
Query: 408 SNYEWPYQFNPWRW 421
Y P +F+P R+
Sbjct: 354 DLYPDPEKFDPERF 367
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 165/386 (42%), Gaps = 40/386 (10%)
Query: 49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEV 108
G +PL GW + + L F+S L D +G V + + T+ E+
Sbjct: 29 GGVPLLGHGWRLARDPLAFMS-QLRD------------HGDVVRIKLGPKTVYAVTNPEL 75
Query: 109 S-KFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITR 167
+ L D P + +SL L+GK + NG L RR I F+ D
Sbjct: 76 TGALALNPDYHIAGPLW-ESLEGLLGKEGVATANGPLHRRQRRTIQPAFR-LDAIPAYGP 133
Query: 168 DMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALIN---LDPGEQMEILKKQFQEFI 224
ME+ H E W + + ES +A +V + L+ +D E+ E L
Sbjct: 134 IMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLRGQYMD--ERAERLCVALATVF 191
Query: 225 SGLMSLPINIPGSQLYR-SLQAKKK-------MARLIQEIIQSKRDGGMSNINVPKDVID 276
G+ + +P LYR L A ++ + L+ EII +R G P D++
Sbjct: 192 RGMYRRMV-VPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQK----PDDLLT 246
Query: 277 VLM-MNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIK 335
L+ + + P+ + I D ++ ++ PG +++ + ++ L+D+P ++ DE
Sbjct: 247 ALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEA 306
Query: 336 LKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWC 395
+ G P+++ D L T NVI E +R+ + + R+A+ + E+ GY IP G
Sbjct: 307 VTG-----GRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGAD 361
Query: 396 FFAYFRSVHLDESNYEWPYQFNPWRW 421
++ D +Y+ +F+P RW
Sbjct: 362 IIYSPYAIQRDPKSYDDNLEFDPDRW 387
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 174/398 (43%), Gaps = 66/398 (16%)
Query: 70 CALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSK--FVLQSDAKAFVPFYP-- 125
A ++ P +M K+ +YG++F + G T+V +V K V QS+ A P P
Sbjct: 30 AASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLF 89
Query: 126 KSLTELMGKSSILLINGGL-QRRIHGLIGSF----FKSADLKAQITRDMEKYIHKSMENW 180
+T++ G + G + RR+ + SF + +++I + K+ + ++E +
Sbjct: 90 MKMTKMGGLLNSRYGRGWVDHRRL--AVNSFRYFGYGQKSFESKILEET-KFFNDAIETY 146
Query: 181 MQDQPIYIQDESKNIAFQVLVKALINLDP----GEQMEILKKQFQEFISGLMSLPINIPG 236
+ +P + Q++ A+ N+ GE+ FQ I L S + +
Sbjct: 147 -KGRPFDFK--------QLITNAVSNITNLIIFGERFTYEDTDFQHMIE-LFSENVELAA 196
Query: 237 S---------------------QLYRSLQAKKK-MARLIQEIIQSKRDGGMSNINVPKDV 274
S QL+R+ ++RLI++ +++ +P+
Sbjct: 197 SASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKP------QLPQHF 250
Query: 275 IDVLM--MNNASDQPLTDDLIADNMI----DMMIPGEDSVPVLMTLAVKYLSDYPAALQQ 328
+D + M+ + P + +N+I +++I G ++ ++ A+ +++ YP Q
Sbjct: 251 VDAYLDEMDQGKNDP-SSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQ 309
Query: 329 LTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNII-IGVMRKAMRDIEIKG 387
+ E + + G+P SW D +P+T+ V+ E LR NI+ +G+ D ++G
Sbjct: 310 VQKE---IDLIMGPNGKP-SWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRG 365
Query: 388 YLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQVSS 425
Y IPKG SVH DE + P F+P R+ SS
Sbjct: 366 YSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSS 403
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 174/398 (43%), Gaps = 66/398 (16%)
Query: 70 CALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSK--FVLQSDAKAFVPFYP-- 125
A ++ P +M K+ +YG++F + G T+V +V K V QS+ A P P
Sbjct: 30 AASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLF 89
Query: 126 KSLTELMGKSSILLINGGL-QRRIHGLIGSF----FKSADLKAQITRDMEKYIHKSMENW 180
+T++ G + G + RR+ + SF + +++I + K+ + ++E +
Sbjct: 90 MKMTKMGGLLNSRYGRGWVDHRRL--AVNSFRYFGYGQKSFESKILEET-KFFNDAIETY 146
Query: 181 MQDQPIYIQDESKNIAFQVLVKALINLDP----GEQMEILKKQFQEFISGLMSLPINIPG 236
+ +P + Q++ A+ N+ GE+ FQ I L S + +
Sbjct: 147 -KGRPFDFK--------QLITNAVSNITNLIIFGERFTYEDTDFQHMIE-LFSENVELAA 196
Query: 237 S---------------------QLYRSLQAKKK-MARLIQEIIQSKRDGGMSNINVPKDV 274
S QL+R+ ++RLI++ +++ +P+
Sbjct: 197 SASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKP------QLPQHF 250
Query: 275 IDVLM--MNNASDQPLTDDLIADNMI----DMMIPGEDSVPVLMTLAVKYLSDYPAALQQ 328
+D + M+ + P + +N+I +++I G ++ ++ A+ +++ YP Q
Sbjct: 251 VDAYLDEMDQGKNDP-SSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQ 309
Query: 329 LTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNII-IGVMRKAMRDIEIKG 387
+ E + + G+P SW D +P+T+ V+ E LR NI+ +G+ D ++G
Sbjct: 310 VQKE---IDLIMGPNGKP-SWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRG 365
Query: 388 YLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQVSS 425
Y IPKG SVH DE + P F+P R+ SS
Sbjct: 366 YSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSS 403
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 161/404 (39%), Gaps = 49/404 (12%)
Query: 49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEV 108
G+LP G P++G L+ L SF+ + R YG VF ++ P +V +
Sbjct: 9 GKLPPGPSPLPVLGNLLQMDRKGLL---RSFL-RLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 109 SKFVLQSDAKAFVPFYPKSLTE-LMGKSSILLINGGLQRRIHGL-------IGSFFKSAD 160
+ L A+AF ++ + + ++ NG R + G +S +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVE 124
Query: 161 LKAQI-TRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDP---------- 209
+ Q R + + + KS + + ++ S I V K DP
Sbjct: 125 ERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 210 --GEQMEILKKQFQEFISGLMSLPINIPGS--QLYRSLQAKKKMARLIQEIIQSKRDGGM 265
+ Q E SG + + PG+ Q+YR+LQ ++ I + ++ R
Sbjct: 185 QSFSLISSFSSQVFELFSGFLK---HFPGTHRQIYRNLQ---EINTFIGQSVEKHR--AT 236
Query: 266 SNINVPKDVIDVLMMNNASDQP-LTDDLIADNMI----DMMIPGEDSVPVLMTLAVKYLS 320
+ + P+D IDV ++ D+ + + N+I + G ++ + +
Sbjct: 237 LDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLML 296
Query: 321 DYPAALQQLTDENIKLKELKAQLG--EPLSWSDYLSLPFTQNVITETLRMGNII-IGVMR 377
YP +++ KE++ +G P + D +P+T VI E R+G++I GV
Sbjct: 297 KYPHVTERVQ------KEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPH 350
Query: 378 KAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
+D + +GY+IPK F S D +E P FNP +
Sbjct: 351 TVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF 394
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 160/404 (39%), Gaps = 49/404 (12%)
Query: 49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEV 108
G+LP G P++G L+ L SF+ + R YG VF ++ P +V +
Sbjct: 9 GKLPPGPSPLPVLGNLLQMDRKGLL---RSFL-RLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 109 SKFVLQSDAKAFVPFYPKSLTE-LMGKSSILLINGGLQRRIHGL-------IGSFFKSAD 160
+ L A+AF ++ + + ++ NG R + G +S +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVE 124
Query: 161 LKAQI-TRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDP---------- 209
+ Q R + + + KS + + ++ S I V K DP
Sbjct: 125 ERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 210 --GEQMEILKKQFQEFISGLMSLPINIPGS--QLYRSLQAKKKMARLIQEIIQSKRDGGM 265
+ Q E SG + PG+ Q+YR+LQ ++ I + ++ R
Sbjct: 185 QSFSLISSFSSQVFELFSGFLKY---FPGTHRQIYRNLQ---EINTFIGQSVEKHR--AT 236
Query: 266 SNINVPKDVIDVLMMNNASDQP-LTDDLIADNMI----DMMIPGEDSVPVLMTLAVKYLS 320
+ + P+D IDV ++ D+ + + N+I + G ++ + +
Sbjct: 237 LDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLML 296
Query: 321 DYPAALQQLTDENIKLKELKAQLG--EPLSWSDYLSLPFTQNVITETLRMGNII-IGVMR 377
YP +++ KE++ +G P + D +P+T VI E R+G++I GV
Sbjct: 297 KYPHVTERVQ------KEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPH 350
Query: 378 KAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
+D + +GY+IPK F S D +E P FNP +
Sbjct: 351 TVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF 394
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 160/404 (39%), Gaps = 49/404 (12%)
Query: 49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEV 108
G+LP G P++G L+ L SF+ + R YG VF ++ P +V +
Sbjct: 9 GKLPPGPSPLPVLGNLLQMDRKGLL---RSFL-RLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 109 SKFVLQSDAKAFVPFYPKSLTE-LMGKSSILLINGGLQRRIHGL-------IGSFFKSAD 160
+ L A+AF ++ + + ++ NG R + G +S +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVE 124
Query: 161 LKAQI-TRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDP---------- 209
+ Q R + + + KS + + ++ S I V K DP
Sbjct: 125 ERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 210 --GEQMEILKKQFQEFISGLMSLPINIPGS--QLYRSLQAKKKMARLIQEIIQSKRDGGM 265
+ Q E SG + PG+ Q+YR+LQ ++ I + ++ R
Sbjct: 185 QSFSLISSFSSQVFELFSGFLKY---FPGTHRQIYRNLQ---EINTFIGQSVEKHR--AT 236
Query: 266 SNINVPKDVIDVLMMNNASDQP-LTDDLIADNMI----DMMIPGEDSVPVLMTLAVKYLS 320
+ + P+D IDV ++ D+ + + N+I + G ++ + +
Sbjct: 237 LDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLML 296
Query: 321 DYPAALQQLTDENIKLKELKAQLG--EPLSWSDYLSLPFTQNVITETLRMGNII-IGVMR 377
YP +++ KE++ +G P + D +P+T VI E R+G++I GV
Sbjct: 297 KYPHVTERVQ------KEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPH 350
Query: 378 KAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
+D + +GY+IPK F S D +E P FNP +
Sbjct: 351 TVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF 394
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 160/404 (39%), Gaps = 49/404 (12%)
Query: 49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEV 108
G+LP G P++G L+ L SF+ + R YG VF ++ P +V +
Sbjct: 9 GKLPPGPSPLPVLGNLLQMDRKGLL---RSFL-RLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 109 SKFVLQSDAKAFVPFYPKSLTE-LMGKSSILLINGGLQRRIHGL-------IGSFFKSAD 160
+ L A+AF ++ + + ++ NG R + G +S +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVE 124
Query: 161 LKAQI-TRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDP---------- 209
+ Q R + + + KS + + ++ S I V K DP
Sbjct: 125 ERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 210 --GEQMEILKKQFQEFISGLMSLPINIPGS--QLYRSLQAKKKMARLIQEIIQSKRDGGM 265
+ Q E SG + PG+ Q+YR+LQ ++ I + ++ R
Sbjct: 185 QSFSLISSFSSQVFELFSGFLKY---FPGTHRQIYRNLQ---EINTFIGQSVEKHR--AT 236
Query: 266 SNINVPKDVIDVLMMNNASDQP-LTDDLIADNMI----DMMIPGEDSVPVLMTLAVKYLS 320
+ + P+D IDV ++ D+ + + N+I + G ++ + +
Sbjct: 237 LDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLML 296
Query: 321 DYPAALQQLTDENIKLKELKAQLG--EPLSWSDYLSLPFTQNVITETLRMGNII-IGVMR 377
YP +++ KE++ +G P + D +P+T VI E R+G++I GV
Sbjct: 297 KYPHVTERVQ------KEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPH 350
Query: 378 KAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
+D + +GY+IPK F S D +E P FNP +
Sbjct: 351 TVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF 394
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 160/404 (39%), Gaps = 49/404 (12%)
Query: 49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEV 108
G+LP G P++G L+ L SF+ + R YG VF ++ P +V +
Sbjct: 9 GKLPPGPSPLPVLGNLLQMDRKGLL---RSFL-RLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 109 SKFVLQSDAKAFVPFYPKSLTE-LMGKSSILLINGGLQRRIHGL-------IGSFFKSAD 160
+ L A+AF ++ + + ++ NG R + G +S +
Sbjct: 65 IREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVE 124
Query: 161 LKAQI-TRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDP---------- 209
+ Q R + + + KS + + ++ S I V K DP
Sbjct: 125 ERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 210 --GEQMEILKKQFQEFISGLMSLPINIPGS--QLYRSLQAKKKMARLIQEIIQSKRDGGM 265
+ Q E SG + PG+ Q+YR+LQ ++ I + ++ R
Sbjct: 185 QSFSLISSFSSQVFELFSGFLKY---FPGTHRQIYRNLQ---EINTFIGQSVEKHR--AT 236
Query: 266 SNINVPKDVIDVLMMNNASDQP-LTDDLIADNMI----DMMIPGEDSVPVLMTLAVKYLS 320
+ + P+D IDV ++ D+ + + N+I + G ++ + +
Sbjct: 237 LDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLML 296
Query: 321 DYPAALQQLTDENIKLKELKAQLG--EPLSWSDYLSLPFTQNVITETLRMGNII-IGVMR 377
YP +++ KE++ +G P + D +P+T VI E R+G++I GV
Sbjct: 297 KYPHVTERVQ------KEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPH 350
Query: 378 KAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
+D + +GY+IPK F S D +E P FNP +
Sbjct: 351 TVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF 394
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 161/403 (39%), Gaps = 59/403 (14%)
Query: 49 GQLPLGTLGW-PIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDA- 106
G+LP G P VG ++F P FM K + YG +F +I G V D
Sbjct: 2 GKLPPVVHGTTPFVGHIIQF-----GKDPLGFMLKAKKKYGGIFTMNICGNRITVVGDVH 56
Query: 107 ----------------EVSKFVLQ--SDAKAFVPFYPKSLTELMGKSSILLINGGLQRRI 148
EV F++ + A+ YP+ +L + L +
Sbjct: 57 QHSKFFTPRNEILSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVA------- 109
Query: 149 HGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQ-PIYIQDESKNIAFQVLVKALIN- 206
K + I ++ K++ NW +D+ I I D+ + + L
Sbjct: 110 --------KFQNFAPSIQHEVRKFMKA---NWNKDEGEINILDDCSAMIINTACQCLFGE 158
Query: 207 -----LDPGEQMEILKKQFQEFISGLMSLP--INIPGSQLYRSLQAKKKMARLIQEIIQS 259
LD + ++L K I + LP + +P Q YR A+ ++ ++ EII +
Sbjct: 159 DLRKRLDARQFAQLLAKMESCLIPAAVFLPWILKLPLPQSYRCRDARAELQDILSEIIIA 218
Query: 260 K-RDGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKY 318
+ ++ + N + +L ++ + ++ M G+ + + T ++ +
Sbjct: 219 REKEEAQKDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLH 278
Query: 319 LSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLS-LPFTQNVITETLRMGNIIIGVMR 377
L D P + L + ++ E AQL ++ + + +PF + E++R ++ +MR
Sbjct: 279 LMD-PRNKRHLAKLHQEIDEFPAQL----NYDNVMEEMPFAEQCARESIRRDPPLVMLMR 333
Query: 378 KAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR 420
K ++ +++ Y++P+G H DE + P ++NP R
Sbjct: 334 KVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPER 376
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 94/185 (50%), Gaps = 7/185 (3%)
Query: 238 QLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASD-QPLTDDLIADN 296
Q R +A+ ++ +++ EII +++ ++ + D++ L+ D P++ +
Sbjct: 211 QSARCHEARTELQKILSEIIIARKAAAVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGM 270
Query: 297 MIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYL-SL 355
++ M G+ + + T ++ +L +PA ++ L +++E AQL ++++ + +
Sbjct: 271 IVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQL----NYNNVMDEM 325
Query: 356 PFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQ 415
PF + E++R ++ +MRK M D+++ Y++PKG H DE + P +
Sbjct: 326 PFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRR 385
Query: 416 FNPWR 420
++P R
Sbjct: 386 WDPER 390
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 95/185 (51%), Gaps = 7/185 (3%)
Query: 238 QLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASD-QPLTDDLIADN 296
Q R +A+ ++ +++ EII ++++ ++ + D++ L+ D P++ +
Sbjct: 197 QSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGM 256
Query: 297 MIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYL-SL 355
++ M G+ + + T ++ +L +PA ++ L +++E AQL ++++ + +
Sbjct: 257 IVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQL----NYNNVMDEM 311
Query: 356 PFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQ 415
PF + E++R ++ +MRK M D+++ Y++PKG H DE + P +
Sbjct: 312 PFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRR 371
Query: 416 FNPWR 420
++P R
Sbjct: 372 WDPER 376
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 95/185 (51%), Gaps = 7/185 (3%)
Query: 238 QLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASD-QPLTDDLIADN 296
Q R +A+ ++ +++ EII ++++ ++ + D++ L+ D P++ +
Sbjct: 198 QSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGM 257
Query: 297 MIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYL-SL 355
++ M G+ + + T ++ +L +PA ++ L +++E AQL ++++ + +
Sbjct: 258 IVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQL----NYNNVMDEM 312
Query: 356 PFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQ 415
PF + E++R ++ +MRK M D+++ Y++PKG H DE + P +
Sbjct: 313 PFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRR 372
Query: 416 FNPWR 420
++P R
Sbjct: 373 WDPER 377
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 95/185 (51%), Gaps = 7/185 (3%)
Query: 238 QLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASD-QPLTDDLIADN 296
Q R +A+ ++ +++ EII ++++ ++ + D++ L+ D P++ +
Sbjct: 199 QSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGM 258
Query: 297 MIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYL-SL 355
++ M G+ + + T ++ +L +PA ++ L +++E AQL ++++ + +
Sbjct: 259 IVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQL----NYNNVMDEM 313
Query: 356 PFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQ 415
PF + E++R ++ +MRK M D+++ Y++PKG H DE + P +
Sbjct: 314 PFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRR 373
Query: 416 FNPWR 420
++P R
Sbjct: 374 WDPER 378
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 95/185 (51%), Gaps = 7/185 (3%)
Query: 238 QLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASD-QPLTDDLIADN 296
Q R +A+ ++ +++ EII ++++ ++ + D++ L+ D P++ +
Sbjct: 198 QSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGM 257
Query: 297 MIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYL-SL 355
++ M G+ + + T ++ +L +PA ++ L +++E AQL ++++ + +
Sbjct: 258 IVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQL----NYNNVMDEM 312
Query: 356 PFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQ 415
PF + E++R ++ +MRK M D+++ Y++PKG H DE + P +
Sbjct: 313 PFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRR 372
Query: 416 FNPWR 420
++P R
Sbjct: 373 WDPER 377
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 95/185 (51%), Gaps = 7/185 (3%)
Query: 238 QLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASD-QPLTDDLIADN 296
Q R +A+ ++ +++ EII ++++ ++ + D++ L+ D P++ +
Sbjct: 211 QSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGM 270
Query: 297 MIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYL-SL 355
++ M G+ + + T ++ +L +PA ++ L +++E AQL ++++ + +
Sbjct: 271 IVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEIEEFPAQL----NYNNVMDEM 325
Query: 356 PFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQ 415
PF + E++R ++ +MRK M D+++ Y++PKG H DE + P +
Sbjct: 326 PFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRR 385
Query: 416 FNPWR 420
++P R
Sbjct: 386 WDPER 390
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 161/376 (42%), Gaps = 40/376 (10%)
Query: 87 YGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFV----PFYPKSLTELMGKSSILLING 142
YGKV+ + P + TD ++ K VL + + PF P KS+I +
Sbjct: 47 YGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFM----KSAISIAED 102
Query: 143 GLQRRIHGLIGSFFKSADLKAQI----------TRDMEKYIHKSMENWMQDQ-PIYIQDE 191
+R+ L+ F S LK + R++ + ++D Y D
Sbjct: 103 EEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDV 162
Query: 192 SKNIAFQVLVKALIN-LDP--GEQMEILKKQFQE-FISGLMSLPINIPGSQLYRSLQAKK 247
+ +F V + +L N DP ++L+ F + F + P IP ++ +
Sbjct: 163 ITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPR 222
Query: 248 KMARLIQEIIQSKRDGGMSNINVPKDVIDVLMM--------NNASDQPLTD-DLIADNMI 298
++ +++ ++ ++ + + K +D L + S + L+D +L+A ++I
Sbjct: 223 EVTNFLRKSVKRMKESRLEDTQ--KHRVDFLQLMIDSQNSKETESHKALSDLELVAQSII 280
Query: 299 DMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFT 358
+ G ++ +++ + L+ +P Q+L +E + KA P ++ L + +
Sbjct: 281 -FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA----PPTYDTVLQMEYL 335
Query: 359 QNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNP 418
V+ ETLR+ I + + R +D+EI G IPKG ++H D + P +F P
Sbjct: 336 DMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLP 395
Query: 419 WRWQVSSQ-NLTLFIF 433
R+ ++ N+ +I+
Sbjct: 396 ERFSKKNKDNIDPYIY 411
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 161/376 (42%), Gaps = 40/376 (10%)
Query: 87 YGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFV----PFYPKSLTELMGKSSILLING 142
YGKV+ + P + TD ++ K VL + + PF P KS+I +
Sbjct: 46 YGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFM----KSAISIAED 101
Query: 143 GLQRRIHGLIGSFFKSADLKAQI----------TRDMEKYIHKSMENWMQDQ-PIYIQDE 191
+R+ L+ F S LK + R++ + ++D Y D
Sbjct: 102 EEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDV 161
Query: 192 SKNIAFQVLVKALIN-LDP--GEQMEILKKQFQE-FISGLMSLPINIPGSQLYRSLQAKK 247
+ +F V + +L N DP ++L+ F + F + P IP ++ +
Sbjct: 162 ITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPR 221
Query: 248 KMARLIQEIIQSKRDGGMSNINVPKDVIDVLMM--------NNASDQPLTD-DLIADNMI 298
++ +++ ++ ++ + + K +D L + S + L+D +L+A ++I
Sbjct: 222 EVTNFLRKSVKRMKESRLEDTQ--KHRVDFLQLMIDSQNSKETESHKALSDLELVAQSII 279
Query: 299 DMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFT 358
+ G ++ +++ + L+ +P Q+L +E + KA P ++ L + +
Sbjct: 280 -FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA----PPTYDTVLQMEYL 334
Query: 359 QNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNP 418
V+ ETLR+ I + + R +D+EI G IPKG ++H D + P +F P
Sbjct: 335 DMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLP 394
Query: 419 WRWQVSSQ-NLTLFIF 433
R+ ++ N+ +I+
Sbjct: 395 ERFSKKNKDNIDPYIY 410
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 40/276 (14%)
Query: 185 PIYIQDESKNIAFQVLVKALIN-LDPGEQMEILKKQFQEFISGLMSL----PINI----- 234
P+ IQ E F +L ++I L G + + L F + + LM I I
Sbjct: 158 PVTIQKE-----FSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVP 212
Query: 235 -----PGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMN----NASD 285
P L+R QA + ++++ ++ ++ ++ +D+ D ++ +
Sbjct: 213 FLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAGQW--RDMTDYMLQGVGRQRVEE 270
Query: 286 QP--LTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQL 343
P L + + +++D+ I G ++ ++ AV +L +P ++L +E L +L
Sbjct: 271 GPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEE------LDREL 324
Query: 344 GEPLSWS-----DYLSLPFTQNVITETLRMGNII-IGVMRKAMRDIEIKGYLIPKGWCFF 397
G S S D LP I E LR+ ++ + + + R I GY IP+G
Sbjct: 325 GPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVI 384
Query: 398 AYFRSVHLDESNYEWPYQFNPWRWQVSSQNLTLFIF 433
+ HLDE+ +E P++F P R+ N + F
Sbjct: 385 PNLQGAHLDETVWEQPHEFRPDRFLEPGANPSALAF 420
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 161/376 (42%), Gaps = 40/376 (10%)
Query: 87 YGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFV----PFYPKSLTELMGKSSILLING 142
YGKV+ + P + TD ++ K VL + + PF P KS+I +
Sbjct: 48 YGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFM----KSAISIAED 103
Query: 143 GLQRRIHGLIGSFFKSADLKAQI----------TRDMEKYIHKSMENWMQDQ-PIYIQDE 191
+R+ L+ F S LK + R++ + ++D Y D
Sbjct: 104 EEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDV 163
Query: 192 SKNIAFQVLVKALIN-LDP--GEQMEILKKQFQE-FISGLMSLPINIPGSQLYRSLQAKK 247
+ +F V + +L N DP ++L+ F + F + P IP ++ +
Sbjct: 164 ITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPR 223
Query: 248 KMARLIQEIIQSKRDGGMSNINVPKDVIDVLMM--------NNASDQPLTD-DLIADNMI 298
++ +++ ++ ++ + + K +D L + S + L+D +L+A ++I
Sbjct: 224 EVTNFLRKSVKRMKESRLEDTQ--KHRVDFLQLMIDSQNSKETESHKALSDLELVAQSII 281
Query: 299 DMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFT 358
+ G ++ +++ + L+ +P Q+L +E + KA P ++ L + +
Sbjct: 282 -FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA----PPTYDTVLQMEYL 336
Query: 359 QNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNP 418
V+ ETLR+ I + + R +D+EI G IPKG ++H D + P +F P
Sbjct: 337 DMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLP 396
Query: 419 WRWQVSSQ-NLTLFIF 433
R+ ++ N+ +I+
Sbjct: 397 ERFSKKNKDNIDPYIY 412
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 350 SDYLSLPFTQNVITETLRMGNII-IGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDES 408
D +P+T VI E R G+I+ +GV RDIE++G+ IPKG SV DE+
Sbjct: 326 GDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEA 385
Query: 409 NYEWPYQFNP 418
+E P++F+P
Sbjct: 386 VWEKPFRFHP 395
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 167/411 (40%), Gaps = 59/411 (14%)
Query: 52 PLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKF 111
P G GWP++G L L P + + YG V + I TP +V + + +
Sbjct: 13 PPGPWGWPLIGHML-----TLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQ 67
Query: 112 VL---QSDAKAFVPFYPKSLTELMGKSSILLINGG----LQRRI-HGLIGSFFKSADLKA 163
L D K Y +L G+S + G +RR+ + SF ++D +
Sbjct: 68 ALVRQGDDFKGRPDLYTFTLIS-NGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPAS 126
Query: 164 QITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINL----------DPGEQ- 212
+ +E+++ K E + + ++ +V ++ N+ D Q
Sbjct: 127 STSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQE 186
Query: 213 ---MEILKKQFQE---------FISGLMSLPINIPGSQLYRSLQAK--KKMARLIQEIIQ 258
+ L F E FI L LP P ++ L K M ++++E +
Sbjct: 187 LLSLVNLNNNFGEVVGSGNPADFIPILRYLPN--PSLNAFKDLNEKFYSFMQKMVKEHYK 244
Query: 259 SKRDGGMSNINVPKDVIDVLM-------MNNASDQPLTDDLIADNMIDMMIPGEDSVPVL 311
+ G + +D+ D L+ ++ ++ L+D+ I + ++D+ G D+V
Sbjct: 245 TFEKGHI------RDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTA 298
Query: 312 MTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNI 371
++ ++ YL P +++ +E L + + P SD LP+ + I ET R +
Sbjct: 299 ISWSLMYLVMNPRVQRKIQEE---LDTVIGRSRRP-RLSDRSHLPYMEAFILETFRHSSF 354
Query: 372 I-IGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
+ + RD +KG+ IPKG C F ++ D+ + P +F P R+
Sbjct: 355 VPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERF 405
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 350 SDYLSLPFTQNVITETLRMGNII-IGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDES 408
D +P+T VI E R G+I+ +G+ RDIE++G+ IPKG SV DE+
Sbjct: 326 GDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEA 385
Query: 409 NYEWPYQFNP 418
+E P++F+P
Sbjct: 386 VWEKPFRFHP 395
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 219 QFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNI--NVPKDVID 276
Q E S +M ++PG Q Q ++ + +++ I K + + N P+D ID
Sbjct: 196 QLYEMFSSVMK---HLPGPQ-----QQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFID 247
Query: 277 --VLMMNNASDQPLTDDLIAD---NMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTD 331
++ M P T+ + + +++ G ++V + L +P ++ +
Sbjct: 248 SFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHE 307
Query: 332 ENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNII-IGVMRKAMRDIEIKGYLI 390
E + + + +P + D +P+ + VI E R G++I +G+ R+ +D + + + +
Sbjct: 308 E---IDRVIGKNRQP-KFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFL 363
Query: 391 PKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
PKG + SV D S + P FNP +
Sbjct: 364 PKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 153/399 (38%), Gaps = 47/399 (11%)
Query: 57 GWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVST--DAEVSKFVLQ 114
GWP++G L L P + + YG V + I TP +V + D V Q
Sbjct: 23 GWPLLGHVL-----TLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQ 77
Query: 115 SDAKAFVPFYPKSLTELMGKSSILLINGG----LQRRI-HGLIGSFFKSADLKAQITRDM 169
D P S G+S + G +RR+ + +F ++D + + +
Sbjct: 78 GDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYL 137
Query: 170 EKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINL-----------DPGEQMEILKK 218
E+++ K + + + + +V ++ N+ + ++M L K
Sbjct: 138 EEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLVK 197
Query: 219 QFQEFISGLMS------LPI--NIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINV 270
EF+ S PI +P L R ++ +Q+ +Q + N
Sbjct: 198 NTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQD--FDKNS 255
Query: 271 PKDVIDVLMMNNASDQPLTDDLIADNMI-----DMMIPGEDSVPVLMTLAVKYLSDYPAA 325
+D+ L ++ + +LI I D+ G D+V ++ ++ YL P
Sbjct: 256 VRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEI 315
Query: 326 LQQLTDE--NIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNII-IGVMRKAMRD 382
+++ E + +E + +L SD LP+ + I ET R + + + RD
Sbjct: 316 QRKIQKELDTVIGRERRPRL------SDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRD 369
Query: 383 IEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
+ G+ IPK C F V+ D +E P +F P R+
Sbjct: 370 TTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERF 408
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 219 QFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNI--NVPKDVID 276
Q E S +M ++PG Q Q ++ + +++ I K + + N P+D ID
Sbjct: 196 QLYEMFSSVMK---HLPGPQ-----QQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFID 247
Query: 277 --VLMMNNASDQPLTDDLIAD---NMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTD 331
++ M P T+ + + +++ I G ++V + L +P ++ +
Sbjct: 248 SFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHE 307
Query: 332 ENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNII-IGVMRKAMRDIEIKGYLI 390
E + + + +P + D +P+ + VI E R G++I + + R+ +D + + + +
Sbjct: 308 E---IDRVIGKNRQP-KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFL 363
Query: 391 PKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
PKG + SV D S + P FNP +
Sbjct: 364 PKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 92/210 (43%), Gaps = 21/210 (10%)
Query: 220 FQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNI--NVPKDVID- 276
++ F S + LP P Q ++ LQ +++ I K + + N P+D ID
Sbjct: 198 YEMFSSVMKHLPG--PQQQAFKELQG-------LEDFIAKKVEHNQRTLDPNSPRDFIDS 248
Query: 277 -VLMMNNASDQPLTDDLIAD---NMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDE 332
++ M P T+ + + +++ G ++V + L +P ++ +E
Sbjct: 249 FLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEE 308
Query: 333 NIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNII-IGVMRKAMRDIEIKGYLIP 391
+ + + +P + D +P+T+ VI E R G+++ +G+ + +D + + + +P
Sbjct: 309 ---IDRVIGKNRQP-KFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLP 364
Query: 392 KGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
KG F SV D + P FNP +
Sbjct: 365 KGTEVFPMLGSVLRDPRFFSNPRDFNPQHF 394
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 92/210 (43%), Gaps = 21/210 (10%)
Query: 220 FQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNI--NVPKDVID- 276
++ F S + LP P Q ++ LQ +++ I K + + N P+D ID
Sbjct: 198 YEMFSSVMKHLPG--PQQQAFQCLQG-------LEDFIAKKVEHNQRTLDPNSPRDFIDS 248
Query: 277 -VLMMNNASDQPLTDDLIAD---NMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDE 332
++ M P T+ + + + + I G ++V + L +P ++ +E
Sbjct: 249 FLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEE 308
Query: 333 NIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNII-IGVMRKAMRDIEIKGYLIP 391
+ + + +P + D +P+ + VI E R G++I + + R+ +D + + + +P
Sbjct: 309 ---IDRVIGKNRQP-KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLP 364
Query: 392 KGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
KG + SV D S + P FNP +
Sbjct: 365 KGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 219 QFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNI--NVPKDVID 276
Q E S +M ++PG Q Q ++ + +++ I K + + N P+D ID
Sbjct: 196 QLYEMFSSVMK---HLPGPQ-----QQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFID 247
Query: 277 --VLMMNNASDQPLTDDLIAD---NMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTD 331
++ M P T+ + + + + I G ++V + L +P ++ +
Sbjct: 248 SFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHE 307
Query: 332 ENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNII-IGVMRKAMRDIEIKGYLI 390
E + + + +P + D +P+ + VI E R G++I + + R+ +D + + + +
Sbjct: 308 E---IDRVIGKNRQP-KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFL 363
Query: 391 PKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
PKG + SV D S + P FNP +
Sbjct: 364 PKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 219 QFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNI--NVPKDVID 276
Q E S +M ++PG Q Q ++ + +++ I K + + N P+D ID
Sbjct: 196 QLYEMFSSVMK---HLPGPQ-----QQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFID 247
Query: 277 --VLMMNNASDQPLTDDLIAD---NMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTD 331
++ M P T+ + + + + + G ++V + L +P ++ +
Sbjct: 248 SFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHE 307
Query: 332 ENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNII-IGVMRKAMRDIEIKGYLI 390
E + + + +P + D +P+ + VI E R G++I + + R+ +D + + + +
Sbjct: 308 E---IDRVIGKNRQP-KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFL 363
Query: 391 PKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
PKG + SV D S + P FNP +
Sbjct: 364 PKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 168/418 (40%), Gaps = 66/418 (15%)
Query: 49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEV 108
G+LP G +PI+G L+ + D +S C YG VF ++ PT+V E
Sbjct: 9 GKLPPGPTPFPIIGNILQIDA---KDISKSLTKFSEC-YGPVFTVYLGMKPTVVLHGYEA 64
Query: 109 SKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRD 168
K L + F G+ S+ + L++ GL +F A+ ++
Sbjct: 65 VKEALVDLGEEFA-----------GRGSVPI----LEKVSKGLGIAF-----SNAKTWKE 104
Query: 169 MEKYIHKSMENW-MQDQPI--YIQDESKNIAFQVLVKALINLDPGEQME----------I 215
M ++ ++ N+ M + I IQ+E++ + ++ DP + I
Sbjct: 105 MRRFSLMTLRNFGMGKRSIEDRIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVI 164
Query: 216 LKKQF----QEFISGLMSLPINI-----PGSQLYRSLQAKK-----------KMARLIQE 255
+F +EF+ + SL N+ P Q+Y + A K A I+
Sbjct: 165 FHNRFDYKDEEFLKLMESLHENVELLGTPWLQVYNNFPALLDYFPGIHKTLLKNADYIKN 224
Query: 256 II--QSKRDGGMSNINVPKDVIDVLM--MNNASDQPLTDDLIADNMIDMMIPGEDSVPVL 311
I + K + ++N P+D ID + M ++ T + + + D+ G ++
Sbjct: 225 FIMEKVKEHQKLLDVNNPRDFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTT 284
Query: 312 MTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNI 371
+ ++ L +P ++ +E ++ + + P D +P+T VI E R ++
Sbjct: 285 LRYSLLLLLKHPEVAARVQEE---IERVIGRHRSP-CMQDRSRMPYTDAVIHEIQRFIDL 340
Query: 372 IIGVMRKAM-RDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQVSSQNL 428
+ + A+ RD+ + Y IPKG SV DE + P F+P + S N
Sbjct: 341 LPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNF 398
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 162/398 (40%), Gaps = 37/398 (9%)
Query: 49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEV 108
G+LP G PI+G L+ + D +SF + + +YG VF + P +V E
Sbjct: 9 GKLPPGPTPLPIIGNMLQI---DVKDICKSFTNFSK-VYGPVFTVYFGMNPIVVFHGYEA 64
Query: 109 SKFVLQSDAKAFVPFYPKSLTELMGKS-SILLINGGLQRRIHGLIGSFFKSADL-KAQIT 166
K L + + F +++ + K I+ NG + I + ++ + K I
Sbjct: 65 VKEALIDNGEEFSGRGNSPISQRITKGLGIISSNGKRWKEIRRFSLTTLRNFGMGKRSIE 124
Query: 167 RDMEKYIHKSMENWMQDQ-----PIYIQDESK-NIAFQVLVKALINLDPGEQMEILKKQF 220
+++ H +E + + P +I + N+ V+ + + + ++K+
Sbjct: 125 DRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTLMKRFN 184
Query: 221 QEF-------ISGLMSLPINI---PGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINV 270
+ F I + P+ I PG+ + L+ I+E + K ++N
Sbjct: 185 ENFRILNSPWIQVCNNFPLLIDCFPGTH-NKVLKNVALTRSYIREKV--KEHQASLDVNN 241
Query: 271 PKDVIDVLMM------NNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPA 324
P+D ID ++ +N + ++L+ + D+ + G ++ + + L +P
Sbjct: 242 PRDFIDCFLIKMEQEKDNQKSEFNIENLVG-TVADLFVAGTETTSTTLRYGLLLLLKHPE 300
Query: 325 ALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNII-IGVMRKAMRDI 383
++ +E + + + P D +P+T V+ E R +++ GV D
Sbjct: 301 VTAKVQEE---IDHVIGRHRSPC-MQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDT 356
Query: 384 EIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
+ + YLIPKG A SV D+ + P F+P +
Sbjct: 357 KFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHF 394
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 219 QFQEFISGLMSLPINIPGS--QLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVID 276
Q E SG + + PG+ Q+Y++LQ ++ I ++ R+ + + P+D+ID
Sbjct: 196 QLFELFSGFLK---HFPGAHRQVYKNLQ---EINAYIGHSVEKHRE--TLDPSAPRDLID 247
Query: 277 VLMMN------NASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLT 330
+++ NA + + + N + + G ++ + + YP +++
Sbjct: 248 TYLLHMEKEKSNAHSE-FSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERV- 305
Query: 331 DENIKLKELKAQLG--EPLSWSDYLSLPFTQNVITETLRMGNII-IGVMRKAMRDIEIKG 387
+E++ +G P D +P+T+ VI E R +++ +GV + +G
Sbjct: 306 -----YREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRG 360
Query: 388 YLIPKGWCFFAYFRSVHLDESNYEWPYQFNP 418
Y+IPK F + D +E P FNP
Sbjct: 361 YIIPKDTEVFLILSTALHDPHYFEKPDAFNP 391
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 153/367 (41%), Gaps = 31/367 (8%)
Query: 76 PESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQS------DAKAFVPFYPKSLT 129
P M + R G V + G ++ + + ++F ++ AKA+ PF +T
Sbjct: 26 PIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAY-PF----MT 80
Query: 130 ELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQ 189
+ G++ ++ + +RR L + + +K +E + + + +W + I +
Sbjct: 81 PIFGEA--VVFDASPERRKEMLHNAALRGEQMKGHAA-TIEDQVRRMIADWGEAGEIDLL 137
Query: 190 DESKNIAFQVLVKALINLDPGEQME-ILKKQFQEFISG---LMSLPINIPGSQLYRSLQA 245
D + LI +Q++ K + E G L + +P R +A
Sbjct: 138 DFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEA 197
Query: 246 KKKMARLIQEIIQSKRDGGMSNINVPK---DVIDVLMMNNA-SDQP-LTDDLIADNMIDM 300
+ + L+ +I+ +G ++N K D++DVL+ A + P + D I I M
Sbjct: 198 RNGLVALVADIM----NGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISM 253
Query: 301 MIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQN 360
M G + + + L + A + DE L EL G +S+ +P +N
Sbjct: 254 MFAGHHTSSGTASWTLIELMRHRDAYAAVIDE---LDELYGD-GRSVSFHALRQIPQLEN 309
Query: 361 VITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR 420
V+ ETLR+ +I +MR A + E++G+ I +G A + ++ P+ F P R
Sbjct: 310 VLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 421 WQVSSQN 427
++ Q
Sbjct: 370 YEQPRQE 376
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 152/367 (41%), Gaps = 31/367 (8%)
Query: 76 PESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQS------DAKAFVPFYPKSLT 129
P M + R G V + G ++ + + ++F ++ AKA+ PF +T
Sbjct: 26 PIGLMQRVRDECGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAY-PF----MT 80
Query: 130 ELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQ 189
+ G+ ++ + +RR L + + +K +E + + + +W + I +
Sbjct: 81 PIFGEG--VVFDASPERRKEMLHNAALRGEQMKGHAA-TIEDQVRRMIADWGEAGEIDLL 137
Query: 190 DESKNIAFQVLVKALINLDPGEQME-ILKKQFQEFISG---LMSLPINIPGSQLYRSLQA 245
D + LI +Q++ K + E G L + +P R +A
Sbjct: 138 DFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEA 197
Query: 246 KKKMARLIQEIIQSKRDGGMSNINVPK---DVIDVLMMNNA-SDQP-LTDDLIADNMIDM 300
+ + L+ +I+ +G ++N K D++DVL+ A + P + D I I M
Sbjct: 198 RNGLVALVADIM----NGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISM 253
Query: 301 MIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQN 360
M G + + + L + A + DE L EL G +S+ +P +N
Sbjct: 254 MFAGHHTSSGTASWTLIELMRHRDAYAAVIDE---LDELYGD-GRSVSFHALRQIPQLEN 309
Query: 361 VITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR 420
V+ ETLR+ +I +MR A + E++G+ I +G A + ++ P+ F P R
Sbjct: 310 VLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 421 WQVSSQN 427
++ Q
Sbjct: 370 YEQPRQE 376
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 152/367 (41%), Gaps = 31/367 (8%)
Query: 76 PESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQS------DAKAFVPFYPKSLT 129
P M + R G V + G ++ + + ++F ++ AKA+ PF +T
Sbjct: 26 PIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAY-PF----MT 80
Query: 130 ELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQ 189
+ G+ ++ + +RR L + + +K +E + + + +W + I +
Sbjct: 81 PIFGEG--VVFDASPERRKEMLHNAALRGEQMKGHAA-TIEDQVRRMIADWGEAGEIDLL 137
Query: 190 DESKNIAFQVLVKALINLDPGEQME-ILKKQFQEFISG---LMSLPINIPGSQLYRSLQA 245
D + LI +Q++ K + E G L + +P R +A
Sbjct: 138 DFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEA 197
Query: 246 KKKMARLIQEIIQSKRDGGMSNINVPK---DVIDVLMMNNA-SDQP-LTDDLIADNMIDM 300
+ + L+ +I+ +G ++N K D++DVL+ A + P + D I I M
Sbjct: 198 RNGLVALVADIM----NGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISM 253
Query: 301 MIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQN 360
M G + + + L + A + DE L EL G +S+ +P +N
Sbjct: 254 MFAGHHTSSGTASWTLIELMRHRDAYAAVIDE---LDELYGD-GRSVSFHALRQIPQLEN 309
Query: 361 VITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR 420
V+ ETLR+ +I +MR A + E++G+ I +G A + ++ P+ F P R
Sbjct: 310 VLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 421 WQVSSQN 427
++ Q
Sbjct: 370 YEQPRQE 376
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 152/367 (41%), Gaps = 31/367 (8%)
Query: 76 PESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQS------DAKAFVPFYPKSLT 129
P M + R G V + G ++ + + ++F ++ AKA+ PF +T
Sbjct: 26 PIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAY-PF----MT 80
Query: 130 ELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQ 189
+ G+ ++ + +RR L + + +K +E + + + +W + I +
Sbjct: 81 PIFGEG--VVFDASPERRKEMLHNAALRGEQMKGHAA-TIEDQVRRMIADWGEAGEIDLL 137
Query: 190 DESKNIAFQVLVKALINLDPGEQME-ILKKQFQEFISG---LMSLPINIPGSQLYRSLQA 245
D + LI +Q++ K + E G L + +P R +A
Sbjct: 138 DFFAELTIYTSSATLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEA 197
Query: 246 KKKMARLIQEIIQSKRDGGMSNINVPK---DVIDVLMMNNA-SDQP-LTDDLIADNMIDM 300
+ + L+ +I+ +G ++N K D++DVL+ A + P + D I I M
Sbjct: 198 RNGLVALVADIM----NGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISM 253
Query: 301 MIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQN 360
M G + + + L + A + DE L EL G +S+ +P +N
Sbjct: 254 MFAGHHTSSGTASWTLIELMRHRDAYAAVIDE---LDELYGD-GRSVSFHALRQIPQLEN 309
Query: 361 VITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR 420
V+ ETLR+ +I +MR A + E++G+ I +G A + ++ P+ F P R
Sbjct: 310 VLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 421 WQVSSQN 427
++ Q
Sbjct: 370 YEQPRQE 376
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 114/254 (44%), Gaps = 16/254 (6%)
Query: 178 ENWMQDQPI--YIQDESK---NIAFQVLVKALIN--LDPGEQMEILKKQFQEFISGLMSL 230
ENW +D+ + ++D N A Q L + L+ ++L K I + +
Sbjct: 133 ENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPAAVFM 192
Query: 231 P--INIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASD-QP 287
P + +P Q R +A+ ++ +++ EII ++ S N D++ L+ D
Sbjct: 193 PWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTR 252
Query: 288 LTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPL 347
++ + ++ M G+ + + + ++ +L +P + L + ++ E AQL
Sbjct: 253 MSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQL---- 307
Query: 348 SWSDYL-SLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLD 406
++ + + +PF + + E++R ++ VMR ++++ Y++PKG H D
Sbjct: 308 NYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHD 367
Query: 407 ESNYEWPYQFNPWR 420
E + P ++P R
Sbjct: 368 EEAFPNPRLWDPER 381
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 114/254 (44%), Gaps = 16/254 (6%)
Query: 178 ENWMQDQPI--YIQDESK---NIAFQVLVKALIN--LDPGEQMEILKKQFQEFISGLMSL 230
ENW +D+ + ++D N A Q L + L+ ++L K I + +
Sbjct: 127 ENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPAAVFM 186
Query: 231 P--INIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASD-QP 287
P + +P Q R +A+ ++ +++ EII ++ S N D++ L+ D
Sbjct: 187 PWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTR 246
Query: 288 LTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPL 347
++ + ++ M G+ + + + ++ +L +P + L + ++ E AQL
Sbjct: 247 MSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQL---- 301
Query: 348 SWSDYL-SLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLD 406
++ + + +PF + + E++R ++ VMR ++++ Y++PKG H D
Sbjct: 302 NYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHD 361
Query: 407 ESNYEWPYQFNPWR 420
E + P ++P R
Sbjct: 362 EEAFPNPRLWDPER 375
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 114/254 (44%), Gaps = 16/254 (6%)
Query: 178 ENWMQDQPI--YIQDESK---NIAFQVLVKALIN--LDPGEQMEILKKQFQEFISGLMSL 230
ENW +D+ + ++D N A Q L + L+ ++L K I + +
Sbjct: 142 ENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPAAVFM 201
Query: 231 P--INIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASD-QP 287
P + +P Q R +A+ ++ +++ EII ++ S N D++ L+ D
Sbjct: 202 PWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTR 261
Query: 288 LTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPL 347
++ + ++ M G+ + + + ++ +L +P + L + ++ E AQL
Sbjct: 262 MSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQL---- 316
Query: 348 SWSDYL-SLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLD 406
++ + + +PF + + E++R ++ VMR ++++ Y++PKG H D
Sbjct: 317 NYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHD 376
Query: 407 ESNYEWPYQFNPWR 420
E + P ++P R
Sbjct: 377 EEAFPNPRLWDPER 390
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 13/217 (5%)
Query: 211 EQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINV 270
E +EIL + + + +L PG+ + L+ M I E ++ ++ ++N
Sbjct: 184 ENIEILSSPWIQVYNNFPALLDYFPGTH-NKLLKNVAFMKSYILEKVKEHQES--MDMNN 240
Query: 271 PKDVIDVLMMN---NASDQP--LTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAA 325
P+D ID +M +QP T + + + +D+ G ++ + A+ L +P
Sbjct: 241 PQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEV 300
Query: 326 LQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMR-DIE 384
++ +E ++ + + P D +P+T V+ E R +++ + A+ DI+
Sbjct: 301 TAKVQEE---IERVIGRNRSP-CMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIK 356
Query: 385 IKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
+ YLIPKG SV D + P F+P +
Sbjct: 357 FRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHF 393
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 267 NINVPKDVIDVLMMN---NASDQP--LTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSD 321
++N P+D ID +M +QP T + + + +D+ G ++ + A+ L
Sbjct: 239 DMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLK 298
Query: 322 YPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMR 381
+P ++ +E ++ + + P D +P+T V+ E R +++ + A+
Sbjct: 299 HPEVTAKVQEE---IERVIGRNRSP-CMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVT 354
Query: 382 -DIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
DI+ + YLIPKG SV D + P F+P +
Sbjct: 355 CDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHF 395
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 11/182 (6%)
Query: 247 KKMARLIQEIIQSKRDGGMS-NINVPKDVIDVLMMN-NASDQPLTDDLIADNMI----DM 300
K +A + +I++ ++ S +IN P+D ID ++ Q + +N++ D+
Sbjct: 218 KNLAFMESDILEKVKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADL 277
Query: 301 MIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQN 360
+ G ++ + A+ L +P ++ +E ++ + + P D +P+T
Sbjct: 278 LGAGTETTSTTLRYALLLLLKHPEVTAKVQEE---IERVVGRNRSP-CMQDRGHMPYTDA 333
Query: 361 VITETLRMGNIIIGVMRKAMR-DIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPW 419
V+ E R ++I + A+ D++ + YLIPKG SV D + P F+P
Sbjct: 334 VVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPR 393
Query: 420 RW 421
+
Sbjct: 394 HF 395
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 145/367 (39%), Gaps = 46/367 (12%)
Query: 51 LPLGTLGWPIVGESLEFISCALT--DRPESFMDKRRCMYGKVFKSHIFGTP--TIVSTDA 106
LP G P + + F+ A+ P F++ YG VF + G ++ +DA
Sbjct: 6 LPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDA 65
Query: 107 EVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQIT 166
F +++ Y + T + GK + + ++ S A K ++
Sbjct: 66 AALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVS 125
Query: 167 RDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALI-NLDPGEQMEILKKQFQEFIS 225
+EK + E+W + KN+ F+ L + +I + ++ Q E ++
Sbjct: 126 -IIEKETKEYFESWGESG-------EKNV-FEALSELIILTASHCLHGKEIRSQLNEKVA 176
Query: 226 GLMS------------LPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKD 273
L + LP +P R +A +++ + + IQ +R I+ D
Sbjct: 177 QLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQS-QEKID---D 232
Query: 274 VIDVLMMNNASD-QPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDE 332
++ L+ D +PLTDD +A +I +++ G+ + +L+ D+
Sbjct: 233 ILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLA---------RDK 283
Query: 333 NIKLK---ELKAQLGE---PLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIK 386
++ K E K GE PL++ L I ETLR+ I+ +MR A +
Sbjct: 284 TLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVA 343
Query: 387 GYLIPKG 393
GY IP G
Sbjct: 344 GYTIPPG 350
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 92/220 (41%), Gaps = 19/220 (8%)
Query: 211 EQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMS-NIN 269
E +L + + + S +PGS + K +A + + + + ++ S + N
Sbjct: 184 ENFHLLSTPWLQLYNNFPSFLHYLPGSHR----KVIKNVAEVKEYVSERVKEHHQSLDPN 239
Query: 270 VPKDVIDVLMM-----NNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPA 324
P+D+ D L++ +++++ T D I + D+ G ++ + + L YP
Sbjct: 240 CPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPE 299
Query: 325 ALQQLTDENIKLKELKAQLGEPL--SWSDYLSLPFTQNVITETLRMGNIIIGVM-RKAMR 381
++L +E + +G + D +P+ V+ E R ++ + +A R
Sbjct: 300 IEEKLHEE------IDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATR 353
Query: 382 DIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
D +GYLIPKG SV D + P +F P +
Sbjct: 354 DTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHF 393
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 121/289 (41%), Gaps = 34/289 (11%)
Query: 165 ITRDMEKYIHKSME-----NWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQ 219
++RD +H+ ++ N+ D I D+ AF+ + + G E++ +
Sbjct: 131 VSRDFVSVLHRRIKKAGSGNYSGD----ISDDLFRFAFESITNVIFGERQGMLEEVVNPE 186
Query: 220 FQEFISGL-----MSLP-INIPGS--QLYRSLQAKKKMARLIQEIIQSKRDGGMSNI--- 268
Q FI + S+P +N+P +L+R+ K +A ++I SK D N
Sbjct: 187 AQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVA--AWDVIFSKADIYTQNFYWE 244
Query: 269 -----NVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYP 323
+V D +L D ++ + I N+ +M+ G D+ + + + Y
Sbjct: 245 LRQKGSVHHDYRGILY-RLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHL-----YE 298
Query: 324 AALQQLTDENIKLKELKAQLGEPLSWSDYLSL-PFTQNVITETLRMGNIIIGVMRKAMRD 382
A + ++ + L A+ + L L P + I ETLR+ I + + R + D
Sbjct: 299 MARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVND 358
Query: 383 IEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQVSSQNLTLF 431
+ ++ Y+IP ++ + + + P F+P RW +N+T F
Sbjct: 359 LVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYF 407
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 121/289 (41%), Gaps = 34/289 (11%)
Query: 165 ITRDMEKYIHKSME-----NWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQ 219
++RD +H+ ++ N+ D I D+ AF+ + + G E++ +
Sbjct: 134 VSRDFVSVLHRRIKKAGSGNYSGD----ISDDLFRFAFESITNVIFGERQGMLEEVVNPE 189
Query: 220 FQEFISGL-----MSLP-INIPGS--QLYRSLQAKKKMARLIQEIIQSKRDGGMSNI--- 268
Q FI + S+P +N+P +L+R+ K +A ++I SK D N
Sbjct: 190 AQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVA--AWDVIFSKADIYTQNFYWE 247
Query: 269 -----NVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYP 323
+V D +L D ++ + I N+ +M+ G D+ + + + Y
Sbjct: 248 LRQKGSVHHDYRGILY-RLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHL-----YE 301
Query: 324 AALQQLTDENIKLKELKAQLGEPLSWSDYLSL-PFTQNVITETLRMGNIIIGVMRKAMRD 382
A + ++ + L A+ + L L P + I ETLR+ I + + R + D
Sbjct: 302 MARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVND 361
Query: 383 IEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQVSSQNLTLF 431
+ ++ Y+IP ++ + + + P F+P RW +N+T F
Sbjct: 362 LVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYF 410
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 288 LTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGE-P 346
LT + + +++M+I D++ V + + ++ +P E +KE++ +GE
Sbjct: 291 LTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNV------EEAIIKEIQTVIGERD 344
Query: 347 LSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKG 393
+ D L +N I E++R ++ VMRKA+ D I GY + KG
Sbjct: 345 IKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKG 391
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 32/177 (18%)
Query: 244 QAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIP 303
QA ++ E+I ++R K+ D L+ +D LT D + N +++I
Sbjct: 205 QAHTEILVYFDELITARR----------KEPGDDLVSTLVTDDDLTIDDVLLNCDNVLIG 254
Query: 304 GEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVIT 363
G ++ +T AV L+ P L L D + + V+
Sbjct: 255 GNETTRHAITGAVHALATVPGLLTALRDGSADV----------------------DTVVE 292
Query: 364 ETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR 420
E LR + + V+R D+ I G +P G A+ + + D + ++ P F P R
Sbjct: 293 EVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR 349
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 345 EPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVH 404
P W Y + + E +R + R A+RD E+ G I KG ++RS +
Sbjct: 285 HPDQWELYKKV-RPETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSAN 343
Query: 405 LDESNYEWPYQFN 417
DE ++ P+ FN
Sbjct: 344 FDEEVFQDPFTFN 356
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 345 EPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVH 404
P W Y + + E +R + R A+RD E+ G I KG ++RS +
Sbjct: 277 HPDQWELYKKV-RPETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSAN 335
Query: 405 LDESNYEWPYQFN 417
DE ++ P+ FN
Sbjct: 336 FDEEVFQDPFTFN 348
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 345 EPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVH 404
P W Y + + E +R + R A+RD E+ G I KG ++RS +
Sbjct: 278 HPDQWELYKKV-RPETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSAN 336
Query: 405 LDESNYEWPYQFN 417
DE ++ P+ FN
Sbjct: 337 FDEEVFQDPFTFN 349
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 345 EPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVH 404
P W Y + + E +R + R A+RD E+ G I KG ++RS +
Sbjct: 294 HPDQWELYKKV-RPETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSAN 352
Query: 405 LDESNYEWPYQFN 417
DE ++ P+ FN
Sbjct: 353 FDEEVFQDPFTFN 365
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 345 EPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVH 404
P W Y + + E +R + R A+RD E+ G I KG ++RS +
Sbjct: 287 HPDQWELYKKV-RPETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSAN 345
Query: 405 LDESNYEWPYQFN 417
DE ++ P+ FN
Sbjct: 346 FDEEVFQDPFTFN 358
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 359 QNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFN 417
+ E +R + R A+ D+E+ G I KG +RS + DE +E P+ FN
Sbjct: 283 ETAADEIVRWATPVSAFQRTALEDVELGGVQIKKGQRVVMSYRSANFDEEVFEDPHTFN 341
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 21/150 (14%)
Query: 268 INVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQ 327
+N D+ L+ + L+ IA I +++ G ++ +T V LS YP
Sbjct: 239 VNHHDDLTSSLVEAEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRD 298
Query: 328 QLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKG 387
+ WSD+ L T + E +R + ++ + R +DIE++G
Sbjct: 299 RW-------------------WSDFDGLAPT--AVEEIVRWASPVVYMRRTLTQDIELRG 337
Query: 388 YLIPKGWCFFAYFRSVHLDESNYEWPYQFN 417
+ G ++ S + DES + P+ F+
Sbjct: 338 TKMAAGDKVSLWYCSANRDESKFADPWTFD 367
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 28/170 (16%)
Query: 252 LIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVL 311
L+ ++ +R + N DV+ +L+ A L+ + + ++ G D+ L
Sbjct: 208 LLHGVLDERRRNPLEN-----DVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYL 262
Query: 312 MTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNI 371
+ AV L P AL+ +KA+ G +N + E LR NI
Sbjct: 263 IAFAVLNLLRSPEALEL----------VKAEPG------------LMRNALDEVLRFDNI 300
Query: 372 I-IGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR 420
+ IG +R A +D+E G I KG F S D + + P F+ R
Sbjct: 301 LRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRR 350
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 28/170 (16%)
Query: 252 LIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVL 311
L+ ++ +R + N DV+ +L+ A L+ + + ++ G D+ L
Sbjct: 208 LLHGVLDERRRNPLEN-----DVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYL 262
Query: 312 MTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNI 371
+ AV L P AL+ +KA+ G +N + E LR NI
Sbjct: 263 IAFAVLNLLRSPEALEL----------VKAEPG------------LMRNALDEVLRFENI 300
Query: 372 I-IGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR 420
+ IG +R A +D+E G I KG F S D + + P F+ R
Sbjct: 301 LRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRR 350
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 361 VITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR 420
VI ET+R + V R A D+ I + +PKG + H D + P +F+P R
Sbjct: 292 VIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR 351
Query: 421 WQV 423
Q+
Sbjct: 352 AQI 354
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 247 KKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNN--ASDQPLTDDLIADNMIDMMIPG 304
K M L+ +II ++ G + D++ ++ + +PL D+ I +I +I G
Sbjct: 211 KVMNDLVDKIIADRKASGEQS----DDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAG 266
Query: 305 EDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPL-SWSDYLSLPFTQNVIT 363
++ L+T A+ +L P LQ+ +E ++ L +P+ S+ L + V+
Sbjct: 267 HETTSGLLTFALYFLVKNPHVLQKAAEEAARV------LVDPVPSYKQVKQLKYVGMVLN 320
Query: 364 ETLRMGNIIIGVMRKAMRDIEIKG-YLIPKGWCFFAYFRSVHLDESNY-EWPYQFNPWRW 421
E LR+ A D + G Y + KG +H D++ + + +F P R+
Sbjct: 321 EALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF 380
Query: 422 QVSS 425
+ S
Sbjct: 381 ENPS 384
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 288 LTDDLIADNMIDMMIPGEDSV--PVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGE 345
L+ + I N +++ D+ P+LMTL L+ P Q L E++ ++ +
Sbjct: 273 LSLEAIKANSMELTAGSVDTTAFPLLMTLF--ELARNPDVQQILRQESLAAAASISEHPQ 330
Query: 346 PLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHL 405
+ LP + + ETLR+ + + + R D+ ++ Y IP G + S+
Sbjct: 331 KAT----TELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGR 386
Query: 406 DESNYEWPYQFNPWRW 421
+ + + P ++NP RW
Sbjct: 387 NAALFPRPERYNPQRW 402
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 122/290 (42%), Gaps = 37/290 (12%)
Query: 165 ITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQM----EILKKQF 220
+++D +HK ++ Q ++ D +++ F +++ N+ GE++ E + +
Sbjct: 136 VSQDFVSLLHKRIKQ--QGSGKFVGDIKEDL-FHFAFESITNVMFGERLGMLEETVNPEA 192
Query: 221 QEFISGL-----MSLPI-NIPGSQLYRSLQAKK------------KMARLIQEIIQSKRD 262
Q+FI + S+P+ N+P +LYR + K A EI
Sbjct: 193 QKFIDAVYKMFHTSVPLLNVP-PELYRLFRTKTWRDHVAAWDTIFNKAEKYTEIFYQDLR 251
Query: 263 GGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDY 322
N P + +L S++ L +D+ A N+ +M+ G ++ + + + Y
Sbjct: 252 RKTEFRNYPGILYCLL----KSEKMLLEDVKA-NITEMLAGGVNTTSMTLQWHL-----Y 301
Query: 323 PAALQQLTDENIKLKELKAQLGEPLSWSDYLSL-PFTQNVITETLRMGNIIIGVMRKAMR 381
A E ++ + L A+ S L + P + I ETLR+ I + + R
Sbjct: 302 EMARSLNVQEMLREEVLNARRQAEGDISKMLQMVPLLKASIKETLRLHPISVTLQRYPES 361
Query: 382 DIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQVSSQNLTLF 431
D+ ++ YLIP ++ D + + P +F+P RW ++L F
Sbjct: 362 DLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLIHF 411
>pdb|1PZD|A Chain A, Structural Identification Of A Conserved Appendage Domain
In The Carboxyl-terminus Of The Copi Gamma-subunit
Length = 322
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 152 IGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGE 211
+G FKS+ +T +Y+ + ++ D ++ D + + Q L + ++P E
Sbjct: 74 LGPLFKSSPEPVALTESETEYVIRCTKHTFTDHMVFQFDCTNTLNDQTLENVTVQMEPSE 133
Query: 212 QMEILKKQFQEFISGLMSLPINIPGS 237
E+L ++ SLP N PG+
Sbjct: 134 AYEVLC-----YVPA-RSLPYNQPGT 153
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 27/183 (14%)
Query: 244 QAKKKMARLIQEIIQSKRD--GGMS--NINVPKDVIDVLMMNNASDQPLTDD-LIADNMI 298
Q+ + AR E I + D G + + PKD + L+ N+ D DD I +
Sbjct: 203 QSADEAARRFHETIATFYDYFNGFTVDRRSCPKDDVMSLLANSKLDGNYIDDKYINAYYV 262
Query: 299 DMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFT 358
+ G D+ A+ LS P L L+ SD +P
Sbjct: 263 AIATAGHDTTSSSSGGAIIGLSRNPEQLA-------------------LAKSDPALIP-- 301
Query: 359 QNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNP 418
++ E +R + MR A+ D E++G I +G + S + DE + P +F+
Sbjct: 302 -RLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDI 360
Query: 419 WRW 421
R+
Sbjct: 361 TRF 363
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 36/82 (43%)
Query: 350 SDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESN 409
D ++P+ + + E++R+ + R + + Y +PKG + + E N
Sbjct: 337 EDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDN 396
Query: 410 YEWPYQFNPWRWQVSSQNLTLF 431
+E ++F P RW + + F
Sbjct: 397 FEDSHKFRPERWLQKEKKINPF 418
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 360 NVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNY 410
+ + E LR+ + + G+ R RD+ I IP G + S + DE Y
Sbjct: 284 DAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQY 334
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 360 NVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNY 410
+ + E LR+ + + G+ R RD+ I IP G + S + DE Y
Sbjct: 284 DAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQY 334
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 360 NVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNY 410
+ + E LR+ + + G+ R RD+ I IP G + S + DE Y
Sbjct: 285 DAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQY 335
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 112/280 (40%), Gaps = 43/280 (15%)
Query: 145 QRRIHGLIGSFFKSA--DLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVK 202
+RRI ++ SF A L I ++ E + +E D + D K A V +
Sbjct: 124 KRRI--VVRSFIGDALDHLSPLIKQNAENLLAPYLERGKSD---LVNDFGKTFAVCVTMD 178
Query: 203 ALINLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYR--SLQAKKKMARLIQEIIQSK 260
++ LD + +I E+ SG+ +I S R SL +++++ + +I+ +
Sbjct: 179 -MLGLDKRDHEKI-----SEWHSGVADFITSISQSPEARAHSLWCSEQLSQYLMPVIKER 232
Query: 261 RDGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLS 320
R +N D+I +L + L+D I ++++++ + + L + +L
Sbjct: 233 R------VNPGSDLISILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLL 286
Query: 321 DYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAM 380
+ P +Q+ D +D +P I ETLR + + R+
Sbjct: 287 NNP---EQMND----------------VLADRSLVP---RAIAETLRYKPPVQLIPRQLS 324
Query: 381 RDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR 420
+D + G I K F + + D +E P FN R
Sbjct: 325 QDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHR 364
>pdb|1R4X|A Chain A, Crystal Structure Analys Of The Gamma-Copi Appendage
Domain
Length = 275
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 152 IGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGE 211
+G FKS+ +T +Y+ + ++ + ++ D + + Q L + ++P E
Sbjct: 27 LGPLFKSSPEPVALTESETEYVIRCTKHTFTNHMVFQFDCTNTLNDQTLENVTVQMEPTE 86
Query: 212 QMEILKKQFQEFISGLMSLPINIPGS 237
E+L ++ SLP N PG+
Sbjct: 87 AYEVLX-----YVPA-RSLPYNQPGT 106
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 351 DYLSLPFTQNVITETLRMGNII-IGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESN 409
D +LP+ + E +R + + + + + + GY IPK F SV+ D
Sbjct: 334 DQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLK 393
Query: 410 YEWPYQFNPWRW 421
+ P F+P R+
Sbjct: 394 WPNPENFDPARF 405
>pdb|2X24|A Chain A, Bovine Acc2 Ct Domain In Complex With Inhibitor
pdb|2X24|B Chain B, Bovine Acc2 Ct Domain In Complex With Inhibitor
Length = 793
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 355 LPFTQNVITETLRMGNIIIGVMRKAMRDIEI 385
+P+ Q V+T R+G I +GV+ R +E+
Sbjct: 411 VPWAQTVVTGRARLGGIPVGVIAAETRTVEL 441
>pdb|3LXH|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXH|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXI|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d1
pdb|3LXI|B Chain B, Crystal Structure Of Camphor-Bound Cyp101d1
Length = 421
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 233 NIPGSQLYRSLQAKKK-MARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPLTDD 291
N P Q RSL+A K + II ++R G + D+I ++ +P+ DD
Sbjct: 192 NTPEEQ-GRSLEAANKGFFEYVAPIIAARRGGSGT------DLITRILNVEIDGKPMPDD 244
Query: 292 LIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLK 337
+ +++ G D+V + + YLS +P + ++ E +KL+
Sbjct: 245 RALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPLKLQ 290
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 165/416 (39%), Gaps = 76/416 (18%)
Query: 49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDA-- 106
G+ PL P +G +L+F + P F+ + +G VF + G T+
Sbjct: 13 GEPPLENGLIPYLGCALQFGA-----NPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLS 67
Query: 107 -----------EVSKFVLQSDAKAF----VPFYPKSLTELMGKSSILLING--------- 142
+ KF + AKAF + + TE + + I + G
Sbjct: 68 YHKVLCHGKYFDWKKFHFATSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTES 127
Query: 143 ---GLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQV 199
LQR + + S K+A A +T M + ++ M + Y+ +++ +
Sbjct: 128 MMENLQRIMRPPVSSNSKTA---AWVTEGMYSFCYRVMF-----EAGYLTIFGRDLTRRD 179
Query: 200 LVKALI--NLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQ-AKKKMARLIQEI 256
KA I NLD +Q + K F ++GL PI ++R+ A++K+A ++
Sbjct: 180 TQKAHILNNLDNFKQFD---KVFPALVAGL---PI-----HMFRTAHNAREKLAESLRHE 228
Query: 257 IQSKRDGGMSNINVPKDVIDVLMMNNASDQPLTD-DLIADNMIDMMIPGEDSVPVLMTLA 315
KR+ ++I + M N + D + +++ + +++P
Sbjct: 229 NLQKRES-------ISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSL 281
Query: 316 VKYLSDYPAALQQLTDENIKLKELKAQL----GEP--LSWSDYLSLPFTQNVITETLRMG 369
+ + + P A++ T+E + E Q G P LS ++ LP ++I E+LR+
Sbjct: 282 FQMIRN-PEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLS 340
Query: 370 NIIIGVMRKAMRD----IEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
+ + + R A D +E Y I K Y + +HLD Y P F R+
Sbjct: 341 SASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRY 395
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Query: 323 PAALQQLTDENIKLKELKAQL----GEP--LSWSDYLSLPFTQNVITETLRMGNIIIGVM 376
P A++ T+E + E Q G P LS ++ LP ++I E+LR+ + + +
Sbjct: 288 PEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNI- 346
Query: 377 RKAMRD----IEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRW 421
R A D +E Y I K Y + +HLD Y P F R+
Sbjct: 347 RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRY 395
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,582,584
Number of Sequences: 62578
Number of extensions: 453745
Number of successful extensions: 1380
Number of sequences better than 100.0: 77
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1271
Number of HSP's gapped (non-prelim): 89
length of query: 438
length of database: 14,973,337
effective HSP length: 102
effective length of query: 336
effective length of database: 8,590,381
effective search space: 2886368016
effective search space used: 2886368016
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)