Query 013675
Match_columns 438
No_of_seqs 442 out of 2895
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 15:00:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013675.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013675hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mc6_A Sphingosine-1-phosphate 100.0 1.3E-46 4.4E-51 389.6 31.4 360 69-436 2-371 (497)
2 3mad_A Sphingosine-1-phosphate 100.0 3.7E-43 1.3E-47 365.3 32.2 332 97-435 65-401 (514)
3 4e1o_A HDC, histidine decarbox 100.0 5.6E-43 1.9E-47 361.1 33.0 328 96-436 44-405 (481)
4 3k40_A Aromatic-L-amino-acid d 100.0 1.3E-42 4.5E-47 357.7 31.4 327 96-436 39-398 (475)
5 3vp6_A Glutamate decarboxylase 100.0 1E-41 3.6E-46 354.0 34.6 321 99-436 65-414 (511)
6 2dgk_A GAD-beta, GADB, glutama 100.0 1.1E-40 3.7E-45 341.2 35.8 324 97-435 12-351 (452)
7 1js3_A DDC;, DOPA decarboxylas 100.0 4E-40 1.4E-44 340.1 32.7 327 97-436 40-401 (486)
8 2okj_A Glutamate decarboxylase 100.0 5.4E-39 1.8E-43 333.2 35.8 319 99-436 62-411 (504)
9 2jis_A Cysteine sulfinic acid 100.0 9.4E-39 3.2E-43 332.3 33.3 318 99-436 78-426 (515)
10 3hbx_A GAD 1, glutamate decarb 100.0 3.3E-38 1.1E-42 327.0 36.4 324 98-436 27-367 (502)
11 2qma_A Diaminobutyrate-pyruvat 100.0 3.9E-37 1.3E-41 318.7 36.5 314 102-435 72-418 (497)
12 3f9t_A TDC, L-tyrosine decarbo 100.0 1.4E-33 4.7E-38 281.4 35.7 317 102-435 4-332 (397)
13 3bc8_A O-phosphoseryl-tRNA(SEC 100.0 3.4E-33 1.2E-37 281.1 20.6 295 101-435 21-345 (450)
14 2z67_A O-phosphoseryl-tRNA(SEC 100.0 5.7E-32 2E-36 277.0 20.9 298 100-434 55-376 (456)
15 1wyu_B Glycine dehydrogenase s 100.0 1.7E-29 5.7E-34 259.9 32.7 310 98-435 37-367 (474)
16 1wyu_A Glycine dehydrogenase ( 100.0 7.3E-28 2.5E-32 245.1 30.1 324 73-435 11-368 (438)
17 3hl2_A O-phosphoseryl-tRNA(SEC 100.0 1.9E-27 6.6E-32 236.4 20.2 298 101-431 39-356 (501)
18 4hvk_A Probable cysteine desul 99.9 1.7E-26 5.8E-31 228.8 24.5 241 165-435 37-280 (382)
19 4eb5_A Probable cysteine desul 99.9 4.6E-26 1.6E-30 226.2 24.5 240 165-435 37-280 (382)
20 3nnk_A Ureidoglycine-glyoxylat 99.9 5.5E-26 1.9E-30 228.1 24.1 245 166-435 41-313 (411)
21 3lvm_A Cysteine desulfurase; s 99.9 2.4E-25 8.1E-30 224.6 28.5 243 166-435 63-308 (423)
22 3isl_A Purine catabolism prote 99.9 4.7E-26 1.6E-30 228.9 21.2 244 166-435 39-313 (416)
23 3vax_A Putative uncharacterize 99.9 2.3E-25 7.7E-30 223.0 24.2 245 166-435 58-307 (400)
24 2z9v_A Aspartate aminotransfer 99.9 2E-25 6.9E-30 222.7 22.8 243 167-435 38-293 (392)
25 1eg5_A Aminotransferase; PLP-d 99.9 2.5E-24 8.6E-29 213.7 28.6 238 167-435 40-283 (384)
26 1elu_A L-cysteine/L-cystine C- 99.9 7.2E-25 2.5E-29 218.2 24.6 267 144-435 32-321 (390)
27 2dr1_A PH1308 protein, 386AA l 99.9 3.1E-25 1E-29 220.6 21.5 242 167-435 49-304 (386)
28 3zrp_A Serine-pyruvate aminotr 99.9 7.3E-26 2.5E-30 224.8 16.6 243 166-435 30-289 (384)
29 2huf_A Alanine glyoxylate amin 99.9 6E-25 2E-29 219.4 23.3 243 166-435 47-306 (393)
30 3e9k_A Kynureninase; kynurenin 99.9 2.1E-25 7E-30 228.6 19.7 239 169-430 109-375 (465)
31 2yrr_A Aminotransferase, class 99.9 7.7E-26 2.6E-30 221.8 15.6 240 166-435 28-278 (353)
32 1vjo_A Alanine--glyoxylate ami 99.9 2.5E-25 8.4E-30 222.3 19.2 242 167-435 63-318 (393)
33 3kgw_A Alanine-glyoxylate amin 99.9 7.7E-25 2.6E-29 218.1 21.8 244 166-435 51-310 (393)
34 1t3i_A Probable cysteine desul 99.9 1.2E-24 3.9E-29 218.9 22.7 243 170-435 71-329 (420)
35 1kmj_A Selenocysteine lyase; p 99.9 2.4E-24 8.3E-29 215.4 22.5 244 169-435 65-325 (406)
36 3ffr_A Phosphoserine aminotran 99.9 9.1E-25 3.1E-29 215.1 18.8 241 165-436 37-291 (362)
37 3cai_A Possible aminotransfera 99.9 1.9E-24 6.5E-29 216.8 21.4 242 168-435 66-327 (406)
38 3a9z_A Selenocysteine lyase; P 99.9 3.4E-24 1.2E-28 217.0 22.9 246 165-433 55-328 (432)
39 2ch1_A 3-hydroxykynurenine tra 99.9 3.4E-24 1.1E-28 214.1 22.1 242 166-435 46-305 (396)
40 1iug_A Putative aspartate amin 99.9 1.9E-24 6.6E-29 212.1 19.1 237 166-435 29-275 (352)
41 2bkw_A Alanine-glyoxylate amin 99.9 1.5E-24 5.1E-29 215.5 15.7 247 166-435 33-305 (385)
42 3f0h_A Aminotransferase; RER07 99.9 5.3E-24 1.8E-28 211.2 18.9 242 166-430 47-297 (376)
43 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 6.5E-24 2.2E-28 210.0 18.3 231 170-435 52-292 (371)
44 3ke3_A Putative serine-pyruvat 99.9 5.6E-23 1.9E-27 205.0 20.6 243 164-435 28-298 (379)
45 1j32_A Aspartate aminotransfer 99.9 1.7E-22 5.8E-27 201.5 23.9 240 162-435 62-315 (388)
46 1m32_A 2-aminoethylphosphonate 99.9 5.6E-23 1.9E-27 202.4 20.1 239 171-435 37-289 (366)
47 3e77_A Phosphoserine aminotran 99.9 1.3E-23 4.3E-28 208.9 14.8 241 164-435 51-297 (377)
48 1qz9_A Kynureninase; kynurenin 99.9 1.7E-22 5.9E-27 203.1 20.6 237 171-435 71-332 (416)
49 1svv_A Threonine aldolase; str 99.9 5.7E-22 1.9E-26 194.8 20.4 231 167-435 45-291 (359)
50 2fnu_A Aminotransferase; prote 99.9 7.8E-22 2.7E-26 195.3 21.4 233 173-435 34-272 (375)
51 3dzz_A Putative pyridoxal 5'-p 99.9 8.7E-22 3E-26 196.1 21.8 238 169-435 64-315 (391)
52 1o4s_A Aspartate aminotransfer 99.9 7.6E-22 2.6E-26 197.2 19.6 238 162-435 73-320 (389)
53 3euc_A Histidinol-phosphate am 99.9 6.7E-22 2.3E-26 195.6 17.4 225 174-435 70-301 (367)
54 1gd9_A Aspartate aminotransfer 99.9 4.9E-21 1.7E-25 190.9 23.2 242 163-435 59-312 (389)
55 1b5p_A Protein (aspartate amin 99.9 4.8E-21 1.6E-25 191.1 23.1 237 162-435 63-314 (385)
56 1rv3_A Serine hydroxymethyltra 99.9 1.6E-21 5.4E-26 200.9 19.7 242 165-435 84-348 (483)
57 3frk_A QDTB; aminotransferase, 99.9 4.1E-21 1.4E-25 190.7 20.8 229 173-435 38-271 (373)
58 4dq6_A Putative pyridoxal phos 99.9 4.4E-21 1.5E-25 191.0 21.1 238 168-435 68-319 (391)
59 1u08_A Hypothetical aminotrans 99.9 2.9E-21 9.9E-26 192.5 19.6 238 162-434 62-312 (386)
60 3ffh_A Histidinol-phosphate am 99.9 1.1E-20 3.9E-25 186.5 23.7 227 173-435 69-300 (363)
61 3qm2_A Phosphoserine aminotran 99.9 1.4E-22 4.8E-27 202.3 9.5 230 166-430 67-307 (386)
62 1xi9_A Putative transaminase; 99.9 3.8E-21 1.3E-25 193.2 19.6 240 163-435 74-328 (406)
63 3nra_A Aspartate aminotransfer 99.9 2.4E-21 8.1E-26 194.2 17.9 237 166-435 77-331 (407)
64 3l8a_A METC, putative aminotra 99.9 2E-21 6.9E-26 196.3 17.2 237 170-435 99-348 (421)
65 2z61_A Probable aspartate amin 99.9 1.2E-20 4.1E-25 187.0 22.3 234 163-435 62-300 (370)
66 2o0r_A RV0858C (N-succinyldiam 99.9 5.2E-21 1.8E-25 192.4 19.4 239 163-434 58-309 (411)
67 1v2d_A Glutamine aminotransfer 99.9 6.5E-21 2.2E-25 189.6 19.3 226 175-434 65-300 (381)
68 1c7n_A Cystalysin; transferase 99.9 1.3E-20 4.5E-25 188.5 21.6 237 169-435 68-319 (399)
69 1v72_A Aldolase; PLP-dependent 99.9 3E-21 1E-25 189.6 16.6 231 170-435 42-288 (356)
70 3qhx_A Cystathionine gamma-syn 99.9 8.4E-21 2.9E-25 190.3 20.1 214 172-434 67-287 (392)
71 1b9h_A AHBA synthase, protein 99.9 1.3E-20 4.5E-25 187.9 20.9 231 174-435 41-278 (388)
72 3kax_A Aminotransferase, class 99.9 5.4E-21 1.9E-25 189.8 17.9 238 169-435 61-311 (383)
73 3uwc_A Nucleotide-sugar aminot 99.9 5.1E-21 1.7E-25 189.7 17.7 229 174-435 41-274 (374)
74 2gb3_A Aspartate aminotransfer 99.9 1.5E-20 5E-25 189.1 21.3 238 162-435 74-321 (409)
75 1fg7_A Histidinol phosphate am 99.9 4.5E-20 1.5E-24 182.3 23.5 220 174-433 61-289 (356)
76 2c0r_A PSAT, phosphoserine ami 99.9 1E-20 3.4E-25 186.9 18.8 231 166-433 44-285 (362)
77 1c4k_A Protein (ornithine deca 99.9 2.7E-21 9.2E-26 207.0 15.6 243 173-435 175-444 (730)
78 3m5u_A Phosphoserine aminotran 99.9 2.8E-21 9.5E-26 191.2 14.4 230 165-433 44-283 (361)
79 2c81_A Glutamine-2-deoxy-scyll 99.9 1.1E-20 3.7E-25 190.6 19.0 239 168-435 39-291 (418)
80 3ndn_A O-succinylhomoserine su 99.9 1.5E-20 5.1E-25 189.8 19.9 215 172-435 82-303 (414)
81 3dr4_A Putative perosamine syn 99.9 3.7E-20 1.3E-24 184.9 22.5 233 173-435 58-292 (391)
82 1bw0_A TAT, protein (tyrosine 99.9 4.2E-20 1.4E-24 185.9 22.6 247 166-435 74-337 (416)
83 3g0t_A Putative aminotransfera 99.9 2.4E-20 8.3E-25 188.8 20.9 254 163-435 78-358 (437)
84 1yiz_A Kynurenine aminotransfe 99.9 1.2E-20 4E-25 190.8 18.4 237 166-434 76-338 (429)
85 1d2f_A MALY protein; aminotran 99.9 4.1E-20 1.4E-24 184.4 21.9 238 169-435 65-315 (390)
86 3cq5_A Histidinol-phosphate am 99.8 1.1E-19 3.7E-24 180.1 24.4 225 170-434 72-304 (369)
87 2rfv_A Methionine gamma-lyase; 99.8 3.2E-20 1.1E-24 186.1 20.6 214 171-431 64-283 (398)
88 3ly1_A Putative histidinol-pho 99.8 4.3E-20 1.5E-24 181.6 21.0 227 173-434 53-286 (354)
89 3dyd_A Tyrosine aminotransfera 99.8 5.1E-20 1.8E-24 186.4 22.1 238 163-435 92-348 (427)
90 2cb1_A O-acetyl homoserine sul 99.8 2.2E-20 7.7E-25 188.3 19.3 227 172-435 57-305 (412)
91 1qgn_A Protein (cystathionine 99.8 6.7E-20 2.3E-24 186.4 22.6 213 171-433 114-334 (445)
92 3a2b_A Serine palmitoyltransfe 99.8 2E-20 6.7E-25 187.2 18.3 229 167-435 84-318 (398)
93 3nyt_A Aminotransferase WBPE; 99.8 5E-20 1.7E-24 182.5 20.9 225 174-430 38-266 (367)
94 3n0l_A Serine hydroxymethyltra 99.8 9.1E-20 3.1E-24 183.2 22.5 232 167-434 67-304 (417)
95 2x3l_A ORN/Lys/Arg decarboxyla 99.8 2.5E-21 8.4E-26 197.4 11.1 220 172-426 58-283 (446)
96 3h14_A Aminotransferase, class 99.8 2.3E-19 7.9E-24 179.0 25.1 245 150-431 51-303 (391)
97 1gc0_A Methionine gamma-lyase; 99.8 6.4E-20 2.2E-24 184.0 21.1 216 171-433 65-286 (398)
98 3fdb_A Beta C-S lyase, putativ 99.8 3.7E-20 1.3E-24 183.5 19.0 234 170-435 61-303 (377)
99 1o69_A Aminotransferase; struc 99.8 1E-19 3.6E-24 182.1 22.5 230 172-430 33-266 (394)
100 3get_A Histidinol-phosphate am 99.8 6.6E-20 2.3E-24 181.1 20.8 226 175-435 69-301 (365)
101 3ri6_A O-acetylhomoserine sulf 99.8 3.5E-20 1.2E-24 187.8 19.0 227 173-436 84-325 (430)
102 2ctz_A O-acetyl-L-homoserine s 99.8 5.4E-20 1.9E-24 186.1 20.3 228 172-436 59-314 (421)
103 2a7v_A Serine hydroxymethyltra 99.8 2.8E-20 9.6E-25 190.9 18.3 235 168-435 97-358 (490)
104 2vyc_A Biodegradative arginine 99.8 2.4E-20 8.1E-25 201.2 18.6 230 173-432 207-466 (755)
105 1e5e_A MGL, methionine gamma-l 99.8 1.1E-19 3.6E-24 183.0 22.2 214 172-432 63-283 (404)
106 1w23_A Phosphoserine aminotran 99.8 4E-21 1.4E-25 189.2 11.3 234 166-433 43-284 (360)
107 2oga_A Transaminase; PLP-depen 99.8 2.1E-19 7.3E-24 180.1 23.8 230 173-435 65-299 (399)
108 3op7_A Aminotransferase class 99.8 4.1E-20 1.4E-24 183.3 18.1 238 160-435 56-300 (375)
109 1lc5_A COBD, L-threonine-O-3-p 99.8 1.7E-19 5.8E-24 178.3 22.5 223 174-435 62-292 (364)
110 3acz_A Methionine gamma-lyase; 99.8 8.3E-20 2.8E-24 182.8 20.4 214 172-433 60-279 (389)
111 3b46_A Aminotransferase BNA3; 99.8 1.7E-20 5.9E-25 191.1 15.7 241 162-434 90-353 (447)
112 3ftb_A Histidinol-phosphate am 99.8 1.6E-19 5.6E-24 177.7 21.9 222 174-434 64-290 (361)
113 2x5d_A Probable aminotransfera 99.8 1.3E-19 4.5E-24 182.3 21.5 236 166-434 74-321 (412)
114 2dou_A Probable N-succinyldiam 99.8 1E-19 3.4E-24 180.7 20.3 234 166-430 62-303 (376)
115 3jzl_A Putative cystathionine 99.8 6.7E-20 2.3E-24 184.4 19.2 218 174-431 62-302 (409)
116 2w8t_A SPT, serine palmitoyltr 99.8 3.1E-19 1.1E-23 180.7 24.1 226 170-434 108-338 (427)
117 3ju7_A Putative PLP-dependent 99.8 2.2E-19 7.7E-24 179.0 22.6 233 167-434 36-275 (377)
118 3tqx_A 2-amino-3-ketobutyrate 99.8 4.5E-20 1.5E-24 184.2 17.6 227 170-434 87-321 (399)
119 2zc0_A Alanine glyoxylate tran 99.8 1.1E-19 3.9E-24 182.1 20.4 239 165-435 73-328 (407)
120 2fq6_A Cystathionine beta-lyas 99.8 1.4E-19 4.9E-24 182.5 20.6 211 173-433 84-303 (415)
121 1pff_A Methionine gamma-lyase; 99.8 2.5E-19 8.5E-24 174.7 21.6 158 175-365 2-166 (331)
122 2o1b_A Aminotransferase, class 99.8 1.1E-19 3.8E-24 182.6 19.4 236 167-434 85-329 (404)
123 2po3_A 4-dehydrase; external a 99.8 6.2E-19 2.1E-23 178.2 24.9 226 174-435 55-285 (424)
124 3i16_A Aluminum resistance pro 99.8 9.4E-20 3.2E-24 184.1 18.8 217 175-431 77-319 (427)
125 1iay_A ACC synthase 2, 1-amino 99.8 2.4E-19 8.2E-24 181.3 21.1 232 168-435 84-347 (428)
126 2dkj_A Serine hydroxymethyltra 99.8 1.2E-19 4.2E-24 181.6 18.6 233 167-435 65-304 (407)
127 3b8x_A WBDK, pyridoxamine 5-ph 99.8 8.8E-19 3E-23 174.9 24.5 233 173-435 36-294 (390)
128 2vi8_A Serine hydroxymethyltra 99.8 2E-19 6.8E-24 180.0 19.5 232 167-435 65-303 (405)
129 1bs0_A Protein (8-amino-7-oxon 99.8 4.4E-19 1.5E-23 176.4 21.7 226 171-434 84-312 (384)
130 1fc4_A 2-amino-3-ketobutyrate 99.8 2.2E-19 7.5E-24 179.7 19.1 226 171-435 90-323 (401)
131 3cog_A Cystathionine gamma-lya 99.8 2.2E-19 7.6E-24 180.6 19.1 210 174-432 70-286 (403)
132 1cs1_A CGS, protein (cystathio 99.8 4.1E-19 1.4E-23 177.3 20.7 213 173-433 54-272 (386)
133 3tcm_A Alanine aminotransferas 99.8 1.4E-18 4.7E-23 179.6 25.3 245 160-435 127-408 (500)
134 3aow_A Putative uncharacterize 99.8 4.4E-19 1.5E-23 180.8 21.0 242 163-435 114-370 (448)
135 1vp4_A Aminotransferase, putat 99.8 1.7E-19 5.8E-24 182.4 17.7 233 165-431 83-336 (425)
136 3p1t_A Putative histidinol-pho 99.8 1.2E-18 4E-23 170.0 23.0 218 174-435 54-272 (337)
137 3piu_A 1-aminocyclopropane-1-c 99.8 4.2E-19 1.4E-23 179.9 19.8 237 166-434 85-351 (435)
138 2r2n_A Kynurenine/alpha-aminoa 99.8 1.4E-18 4.7E-23 175.7 23.4 238 166-433 77-344 (425)
139 3fvs_A Kynurenine--oxoglutarat 99.8 3.3E-19 1.1E-23 179.6 18.6 241 163-434 63-330 (422)
140 3jtx_A Aminotransferase; NP_28 99.8 7.6E-19 2.6E-23 175.3 20.9 237 163-430 62-317 (396)
141 3e2y_A Kynurenine-oxoglutarate 99.8 4E-19 1.4E-23 178.2 18.7 244 163-434 57-323 (410)
142 1mdo_A ARNB aminotransferase; 99.8 4.2E-19 1.4E-23 177.0 18.7 228 173-434 41-283 (393)
143 1n8p_A Cystathionine gamma-lya 99.8 2.1E-19 7E-24 180.2 16.4 209 173-432 57-276 (393)
144 3ht4_A Aluminum resistance pro 99.8 2.8E-19 9.5E-24 181.2 17.3 220 173-430 67-307 (431)
145 1ibj_A CBL, cystathionine beta 99.8 7.6E-19 2.6E-23 179.7 20.2 160 172-365 134-299 (464)
146 3hvy_A Cystathionine beta-lyas 99.8 4.5E-19 1.5E-23 179.1 18.0 216 175-431 78-319 (427)
147 3ezs_A Aminotransferase ASPB; 99.8 5.8E-19 2E-23 174.9 18.5 247 148-428 41-301 (376)
148 3nmy_A Xometc, cystathionine g 99.8 8.4E-19 2.9E-23 176.1 19.2 213 174-435 70-290 (400)
149 3gbx_A Serine hydroxymethyltra 99.8 1.1E-18 3.9E-23 175.2 19.2 230 170-435 75-312 (420)
150 2zyj_A Alpha-aminodipate amino 99.8 2.3E-19 7.9E-24 179.5 13.9 227 175-435 78-318 (397)
151 4f4e_A Aromatic-amino-acid ami 99.8 5.3E-19 1.8E-23 178.5 16.4 243 162-430 87-355 (420)
152 3ele_A Amino transferase; RER0 99.8 1.9E-18 6.4E-23 172.7 19.7 179 165-362 74-265 (398)
153 3hdo_A Histidinol-phosphate am 99.8 1E-18 3.5E-23 172.4 17.2 219 174-435 68-288 (360)
154 2bwn_A 5-aminolevulinate synth 99.8 2.5E-18 8.6E-23 172.1 20.1 228 172-435 92-325 (401)
155 3ihj_A Alanine aminotransferas 99.8 5.7E-18 1.9E-22 174.9 23.3 246 161-435 123-407 (498)
156 3fsl_A Aromatic-amino-acid ami 99.8 5.7E-18 1.9E-22 169.0 22.3 244 162-431 65-334 (397)
157 3n75_A LDC, lysine decarboxyla 99.8 4.5E-19 1.5E-23 188.5 14.8 228 173-432 197-444 (715)
158 2fyf_A PSAT, phosphoserine ami 99.8 7E-19 2.4E-23 176.2 15.1 235 166-435 73-322 (398)
159 3kki_A CAI-1 autoinducer synth 99.8 1.3E-18 4.5E-23 174.7 16.9 225 171-434 104-330 (409)
160 1uu1_A Histidinol-phosphate am 99.8 4.5E-18 1.5E-22 166.2 19.3 211 174-434 59-275 (335)
161 7aat_A Aspartate aminotransfer 99.8 6.7E-18 2.3E-22 168.9 20.8 241 162-430 66-336 (401)
162 3ecd_A Serine hydroxymethyltra 99.8 5E-18 1.7E-22 170.7 19.8 228 171-434 78-312 (425)
163 3lws_A Aromatic amino acid bet 99.8 2E-18 6.9E-23 169.9 16.5 220 175-435 51-280 (357)
164 3meb_A Aspartate aminotransfer 99.8 4.8E-18 1.6E-22 173.1 19.8 236 162-430 89-371 (448)
165 1jg8_A L-ALLO-threonine aldola 99.8 1.2E-18 4.1E-23 170.7 14.1 166 175-365 42-220 (347)
166 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 8.7E-18 3E-22 170.5 20.9 130 173-316 64-198 (437)
167 3pj0_A LMO0305 protein; struct 99.8 3.2E-18 1.1E-22 168.5 16.9 223 173-435 50-282 (359)
168 2ez2_A Beta-tyrosinase, tyrosi 99.8 1.4E-17 4.9E-22 169.6 22.3 238 163-434 71-335 (456)
169 3h7f_A Serine hydroxymethyltra 99.8 1E-17 3.4E-22 170.7 21.1 228 167-430 87-321 (447)
170 3t18_A Aminotransferase class 99.8 6.2E-18 2.1E-22 170.0 18.2 245 163-435 75-350 (413)
171 2x5f_A Aspartate_tyrosine_phen 99.8 5.7E-18 1.9E-22 171.2 17.9 236 166-428 87-352 (430)
172 3ppl_A Aspartate aminotransfer 99.8 1E-17 3.4E-22 169.4 18.9 171 175-360 82-274 (427)
173 1yaa_A Aspartate aminotransfer 99.8 4.3E-18 1.5E-22 171.1 15.9 245 163-431 69-345 (412)
174 2eh6_A Acoat, acetylornithine 99.8 3.3E-17 1.1E-21 162.2 21.6 219 173-431 72-310 (375)
175 2q7w_A Aspartate aminotransfer 99.8 1.3E-17 4.6E-22 166.3 18.5 240 163-431 65-333 (396)
176 1ajs_A Aspartate aminotransfer 99.8 5.5E-18 1.9E-22 170.2 15.7 245 163-431 70-345 (412)
177 1ax4_A Tryptophanase; tryptoph 99.8 2E-17 6.9E-22 168.9 20.1 236 175-434 80-345 (467)
178 3rq1_A Aminotransferase class 99.8 2.4E-17 8.1E-22 166.0 19.3 260 147-434 60-351 (418)
179 3ez1_A Aminotransferase MOCR f 99.8 1.9E-17 6.5E-22 166.9 17.9 175 175-361 74-268 (423)
180 3if2_A Aminotransferase; YP_26 99.7 1.2E-17 4E-22 169.5 16.1 179 162-360 78-290 (444)
181 1vef_A Acetylornithine/acetyl- 99.7 7.8E-17 2.7E-21 160.8 21.8 222 171-431 87-325 (395)
182 2aeu_A Hypothetical protein MJ 99.7 3.4E-17 1.2E-21 162.9 18.8 158 171-361 58-222 (374)
183 3qgu_A LL-diaminopimelate amin 99.7 1.2E-16 4.1E-21 162.4 23.1 251 144-434 87-367 (449)
184 3f6t_A Aspartate aminotransfer 99.7 1.5E-17 5.1E-22 173.2 16.5 181 165-363 136-331 (533)
185 3b1d_A Betac-S lyase; HET: PLP 99.6 9.8E-20 3.3E-24 182.0 0.0 239 169-435 68-319 (392)
186 3ruy_A Ornithine aminotransfer 99.7 2.1E-16 7.3E-21 157.5 23.9 224 172-430 79-322 (392)
187 2ay1_A Aroat, aromatic amino a 99.7 1.2E-17 4.1E-22 166.6 14.4 239 163-430 65-329 (394)
188 3fkd_A L-threonine-O-3-phospha 99.7 9.7E-18 3.3E-22 164.7 13.0 215 175-435 54-272 (350)
189 3g7q_A Valine-pyruvate aminotr 99.7 5E-17 1.7E-21 163.2 17.0 184 162-365 70-268 (417)
190 3d6k_A Putative aminotransfera 99.7 1.5E-16 5E-21 160.7 18.3 169 175-360 80-272 (422)
191 3ei9_A LL-diaminopimelate amin 99.7 3E-16 1E-20 158.7 20.0 234 163-434 94-355 (432)
192 3asa_A LL-diaminopimelate amin 99.7 1.4E-16 4.7E-21 159.6 16.4 223 167-434 75-318 (400)
193 4eu1_A Mitochondrial aspartate 99.7 9.2E-16 3.1E-20 153.9 22.0 242 161-430 73-344 (409)
194 4adb_A Succinylornithine trans 99.7 7.8E-16 2.7E-20 153.9 21.1 223 172-430 82-322 (406)
195 2ord_A Acoat, acetylornithine 99.7 3.5E-16 1.2E-20 156.3 17.8 220 171-430 82-321 (397)
196 1s0a_A Adenosylmethionine-8-am 99.7 3.6E-15 1.2E-19 150.7 22.0 232 173-430 88-350 (429)
197 3nx3_A Acoat, acetylornithine 99.7 3.1E-15 1.1E-19 149.3 21.1 170 171-362 78-264 (395)
198 2oqx_A Tryptophanase; lyase, p 99.7 1.7E-15 5.7E-20 154.6 19.3 184 163-362 70-281 (467)
199 2pb2_A Acetylornithine/succiny 99.6 3.8E-15 1.3E-19 150.4 18.6 223 171-430 99-340 (420)
200 3i4j_A Aminotransferase, class 99.6 6.7E-15 2.3E-19 148.7 19.6 177 171-365 72-280 (430)
201 2eo5_A 419AA long hypothetical 99.6 4.2E-14 1.4E-18 142.5 24.8 220 172-430 87-348 (419)
202 3n5m_A Adenosylmethionine-8-am 99.6 5.5E-14 1.9E-18 143.0 25.3 174 170-362 90-301 (452)
203 3k7y_A Aspartate aminotransfer 99.6 6.5E-14 2.2E-18 140.7 25.3 193 160-364 65-270 (405)
204 2oat_A Ornithine aminotransfer 99.6 3.8E-14 1.3E-18 143.9 23.8 223 173-430 120-363 (439)
205 3ou5_A Serine hydroxymethyltra 99.6 1.6E-14 5.5E-19 143.2 20.0 240 166-435 95-358 (490)
206 1z7d_A Ornithine aminotransfer 99.6 4.1E-14 1.4E-18 143.4 23.4 224 172-430 108-352 (433)
207 3a8u_X Omega-amino acid--pyruv 99.6 2.1E-14 7.3E-19 145.9 21.1 237 171-431 93-369 (449)
208 3dxv_A Alpha-amino-epsilon-cap 99.6 9.5E-15 3.3E-19 148.0 18.4 172 170-361 85-285 (439)
209 3dod_A Adenosylmethionine-8-am 99.6 5.6E-14 1.9E-18 142.9 22.6 175 171-362 87-297 (448)
210 3tfu_A Adenosylmethionine-8-am 99.6 1.3E-14 4.4E-19 148.2 17.7 236 171-430 118-379 (457)
211 3hmu_A Aminotransferase, class 99.6 2.4E-14 8.2E-19 146.8 19.0 175 171-362 99-309 (472)
212 3gju_A Putative aminotransfera 99.6 4.8E-14 1.6E-18 143.9 20.3 175 171-362 95-307 (460)
213 3bwn_A AT1G70560, L-tryptophan 99.6 1.2E-14 4.3E-19 145.2 14.9 228 161-435 57-306 (391)
214 3i5t_A Aminotransferase; pyrid 99.6 1.7E-13 5.7E-18 140.6 23.5 234 170-430 96-369 (476)
215 1sff_A 4-aminobutyrate aminotr 99.6 6E-14 2.1E-18 141.2 19.4 221 173-429 86-337 (426)
216 4a6r_A Omega transaminase; tra 99.6 9.3E-14 3.2E-18 141.7 19.7 175 170-362 93-305 (459)
217 3l44_A Glutamate-1-semialdehyd 99.6 8.3E-14 2.8E-18 140.8 18.0 163 172-361 96-285 (434)
218 2cjg_A L-lysine-epsilon aminot 99.6 2.1E-13 7.2E-18 138.8 21.0 232 171-429 101-370 (449)
219 3fq8_A Glutamate-1-semialdehyd 99.5 5.3E-14 1.8E-18 142.0 15.4 167 171-365 92-285 (427)
220 4ffc_A 4-aminobutyrate aminotr 99.5 1.9E-13 6.4E-18 139.3 19.3 173 170-362 106-310 (453)
221 2zy4_A L-aspartate beta-decarb 99.5 2E-14 6.7E-19 149.9 12.2 156 198-364 169-334 (546)
222 3oks_A 4-aminobutyrate transam 99.5 6.5E-13 2.2E-17 135.2 22.2 171 170-362 103-312 (451)
223 2cy8_A D-phgat, D-phenylglycin 99.5 1.4E-13 4.8E-18 140.0 16.4 221 169-430 95-344 (453)
224 2epj_A Glutamate-1-semialdehyd 99.5 3.8E-13 1.3E-17 136.0 18.3 218 171-430 96-344 (434)
225 1zod_A DGD, 2,2-dialkylglycine 99.5 4.6E-13 1.6E-17 135.2 18.9 227 171-429 85-343 (433)
226 3k28_A Glutamate-1-semialdehyd 99.5 2.5E-13 8.6E-18 137.2 15.7 218 172-430 94-340 (429)
227 4e77_A Glutamate-1-semialdehyd 99.5 5.8E-13 2E-17 134.4 18.0 162 171-361 93-283 (429)
228 2hox_A ALLIIN lyase 1; cystein 99.5 7.7E-14 2.6E-18 141.1 11.5 215 169-435 102-341 (427)
229 1ohv_A 4-aminobutyrate aminotr 99.5 4.1E-12 1.4E-16 130.1 21.5 224 170-430 109-394 (472)
230 2e7u_A Glutamate-1-semialdehyd 99.4 3.1E-12 1.1E-16 128.8 17.2 219 170-430 91-340 (424)
231 4h51_A Aspartate aminotransfer 99.4 4.4E-12 1.5E-16 127.7 16.4 261 146-430 65-351 (420)
232 4ao9_A Beta-phenylalanine amin 99.2 1.1E-10 3.8E-15 118.3 15.6 215 173-429 129-360 (454)
233 4e3q_A Pyruvate transaminase; 99.2 2.4E-10 8.1E-15 116.7 16.9 235 172-430 112-383 (473)
234 2yky_A Beta-transaminase; tran 98.8 2.4E-12 8E-17 131.3 0.0 222 170-430 139-375 (465)
235 4atq_A 4-aminobutyrate transam 99.2 4.2E-09 1.4E-13 107.0 23.4 169 173-362 109-311 (456)
236 4a0g_A Adenosylmethionine-8-am 98.7 8.8E-07 3E-11 96.3 20.5 171 175-362 428-681 (831)
237 3mfq_A TROA, high-affinity zin 56.9 65 0.0022 29.5 10.1 75 228-308 164-243 (282)
238 1vp8_A Hypothetical protein AF 54.3 90 0.0031 27.0 9.5 111 198-311 19-147 (201)
239 4gqr_A Pancreatic alpha-amylas 51.0 7.4 0.00025 38.6 2.7 31 282-312 69-99 (496)
240 2o1e_A YCDH; alpha-beta protei 49.1 1.7E+02 0.0056 27.2 11.9 71 227-307 191-266 (312)
241 1g94_A Alpha-amylase; beta-alp 46.3 9.5 0.00033 37.7 2.6 32 281-312 56-87 (448)
242 3gi1_A LBP, laminin-binding pr 45.4 1.8E+02 0.0061 26.5 12.9 71 227-307 180-255 (286)
243 3bh4_A Alpha-amylase; calcium, 42.0 13 0.00044 37.1 2.9 31 282-312 71-101 (483)
244 3ff4_A Uncharacterized protein 42.0 30 0.001 27.5 4.5 43 263-313 72-114 (122)
245 1f2d_A 1-aminocyclopropane-1-c 41.6 67 0.0023 30.1 7.8 53 198-257 70-136 (341)
246 3kts_A Glycerol uptake operon 41.2 22 0.00074 30.9 3.7 47 262-313 18-66 (192)
247 3vc3_A Beta-cyanoalnine syntha 41.1 16 0.00053 34.9 3.1 52 198-256 91-142 (344)
248 1ud2_A Amylase, alpha-amylase; 40.9 14 0.00047 36.8 2.9 31 282-312 73-103 (480)
249 1mxg_A Alpha amylase; hyperthe 40.4 14 0.00049 36.3 2.9 31 282-312 79-109 (435)
250 1wpc_A Glucan 1,4-alpha-maltoh 40.3 14 0.00049 36.8 2.9 31 282-312 75-105 (485)
251 1lwj_A 4-alpha-glucanotransfer 39.8 13 0.00043 36.6 2.3 30 283-312 63-92 (441)
252 3hh8_A Metal ABC transporter s 39.8 2.2E+02 0.0076 26.0 11.0 66 235-307 189-259 (294)
253 1hvx_A Alpha-amylase; hydrolas 39.3 15 0.00051 37.0 2.9 31 282-312 74-104 (515)
254 1tks_A 3,4-dihydroxy-2-butanon 39.0 40 0.0014 29.4 5.1 37 271-307 157-193 (204)
255 3cx3_A Lipoprotein; zinc-bindi 38.8 2E+02 0.0068 26.1 10.4 71 227-307 178-253 (284)
256 4aie_A Glucan 1,6-alpha-glucos 38.5 13 0.00046 37.4 2.4 30 283-312 73-102 (549)
257 1gcy_A Glucan 1,4-alpha-maltot 38.4 16 0.00056 36.9 3.0 29 284-312 87-115 (527)
258 2guy_A Alpha-amylase A; (beta- 37.9 13 0.00046 36.9 2.2 31 282-312 90-120 (478)
259 3rjz_A N-type ATP pyrophosphat 37.5 2.2E+02 0.0075 25.3 11.6 94 198-307 9-120 (237)
260 3uug_A Multiple sugar-binding 37.0 85 0.0029 28.5 7.7 67 239-310 25-92 (330)
261 3dhu_A Alpha-amylase; structur 37.0 15 0.00053 36.1 2.5 31 282-312 76-106 (449)
262 1ht6_A AMY1, alpha-amylase iso 36.5 15 0.00051 35.7 2.2 29 284-312 63-91 (405)
263 1y80_A Predicted cobalamin bin 35.9 1.5E+02 0.0052 25.4 8.7 65 241-311 110-179 (210)
264 1j0a_A 1-aminocyclopropane-1-c 35.6 1.3E+02 0.0044 27.9 8.7 53 198-257 73-129 (325)
265 3tb6_A Arabinose metabolism tr 35.6 1.3E+02 0.0043 26.7 8.4 80 229-310 20-107 (298)
266 2dh2_A 4F2 cell-surface antige 35.6 15 0.00051 36.1 2.1 31 282-312 74-104 (424)
267 4fgs_A Probable dehydrogenase 35.4 49 0.0017 30.2 5.5 84 198-291 32-121 (273)
268 1wza_A Alpha-amylase A; hydrol 35.3 14 0.00049 36.8 1.9 30 283-312 75-104 (488)
269 1jae_A Alpha-amylase; glycosid 34.4 14 0.00049 36.7 1.8 31 282-312 67-97 (471)
270 3m9w_A D-xylose-binding peripl 34.1 1.2E+02 0.0042 27.3 8.2 64 239-307 24-87 (313)
271 2z1k_A (NEO)pullulanase; hydro 34.0 15 0.0005 36.6 1.7 31 282-312 89-119 (475)
272 2aaa_A Alpha-amylase; glycosid 33.9 15 0.00052 36.5 1.9 32 281-312 89-120 (484)
273 1j0h_A Neopullulanase; beta-al 32.9 18 0.0006 37.2 2.2 32 282-313 215-246 (588)
274 1zja_A Trehalulose synthase; s 32.6 18 0.00062 36.8 2.2 30 283-312 73-102 (557)
275 2pqm_A Cysteine synthase; OASS 32.6 39 0.0013 31.9 4.5 52 198-256 82-133 (343)
276 1v77_A PH1877P, hypothetical p 32.5 26 0.00088 30.7 2.9 82 227-309 77-166 (212)
277 1ea9_C Cyclomaltodextrinase; h 32.4 20 0.00068 36.8 2.5 32 282-313 211-242 (583)
278 2wc7_A Alpha amylase, catalyti 31.2 16 0.00055 36.4 1.5 31 282-312 95-125 (488)
279 1iuk_A Hypothetical protein TT 30.8 33 0.0011 27.8 3.1 41 266-313 87-127 (140)
280 1m53_A Isomaltulose synthase; 30.6 18 0.00061 37.0 1.7 30 283-312 86-115 (570)
281 1wzl_A Alpha-amylase II; pullu 30.2 19 0.00065 36.9 1.9 31 282-312 212-242 (585)
282 1d3c_A Cyclodextrin glycosyltr 30.1 23 0.0008 37.0 2.6 31 282-312 108-138 (686)
283 1qho_A Alpha-amylase; glycosid 29.8 24 0.00082 37.0 2.6 30 283-312 101-130 (686)
284 3grp_A 3-oxoacyl-(acyl carrier 29.6 1.4E+02 0.0048 26.6 7.6 83 198-290 30-118 (266)
285 3bc9_A AMYB, alpha amylase, ca 29.5 26 0.00089 36.1 2.7 30 283-312 202-231 (599)
286 3l6u_A ABC-type sugar transpor 29.5 1.1E+02 0.0036 27.3 6.8 68 239-311 30-98 (293)
287 1ua7_A Alpha-amylase; beta-alp 29.4 16 0.00055 35.7 1.1 29 284-312 69-97 (422)
288 1g5a_A Amylosucrase; glycosylt 29.3 26 0.00088 36.4 2.7 31 282-312 155-185 (628)
289 1uok_A Oligo-1,6-glucosidase; 29.1 19 0.00067 36.6 1.7 30 283-312 72-101 (558)
290 1cyg_A Cyclodextrin glucanotra 29.1 23 0.00079 37.1 2.3 30 283-312 105-134 (680)
291 3edf_A FSPCMD, cyclomaltodextr 28.9 23 0.00078 36.5 2.2 30 283-312 192-221 (601)
292 3bmv_A Cyclomaltodextrin gluca 28.5 26 0.00089 36.7 2.6 31 282-312 109-139 (683)
293 3dwg_A Cysteine synthase B; su 28.4 76 0.0026 29.6 5.6 52 198-256 77-128 (325)
294 2q5c_A NTRC family transcripti 28.3 2.3E+02 0.0078 24.1 8.4 63 230-305 100-162 (196)
295 4aef_A Neopullulanase (alpha-a 28.2 21 0.0007 37.2 1.7 31 282-312 278-308 (645)
296 3aj7_A Oligo-1,6-glucosidase; 27.8 24 0.00084 36.2 2.2 30 283-312 81-110 (589)
297 2zic_A Dextran glucosidase; TI 27.6 20 0.00067 36.5 1.4 30 283-312 72-101 (543)
298 2e8y_A AMYX protein, pullulana 27.6 18 0.00062 38.2 1.2 27 286-312 312-338 (718)
299 2bhu_A Maltooligosyltrehalose 27.3 22 0.00075 36.7 1.7 32 281-312 184-215 (602)
300 3czg_A Sucrose hydrolase; (alp 27.3 25 0.00086 36.5 2.2 30 283-312 149-178 (644)
301 2ze0_A Alpha-glucosidase; TIM 27.2 24 0.00081 35.9 1.9 30 283-312 72-101 (555)
302 1pq4_A Periplasmic binding pro 26.7 3.6E+02 0.012 24.4 11.2 70 227-307 191-264 (291)
303 2d59_A Hypothetical protein PH 26.5 72 0.0025 25.8 4.5 44 263-313 91-134 (144)
304 3jy6_A Transcriptional regulat 26.5 1.1E+02 0.0039 26.9 6.4 8 196-203 10-17 (276)
305 3rwb_A TPLDH, pyridoxal 4-dehy 26.4 1.3E+02 0.0043 26.4 6.6 82 198-289 9-96 (247)
306 1m7x_A 1,4-alpha-glucan branch 26.1 24 0.00081 36.5 1.7 32 282-313 197-228 (617)
307 3lkv_A Uncharacterized conserv 26.0 2.9E+02 0.01 24.9 9.3 65 239-308 161-225 (302)
308 3zss_A Putative glucanohydrola 25.9 35 0.0012 35.9 2.9 32 281-312 312-343 (695)
309 3rpc_A Possible metal-dependen 25.6 3E+02 0.01 24.2 9.1 77 228-304 162-249 (264)
310 4dqx_A Probable oxidoreductase 25.6 1.5E+02 0.0051 26.6 7.0 82 198-289 30-117 (277)
311 3vgf_A Malto-oligosyltrehalose 25.4 23 0.00079 36.1 1.5 32 281-312 159-190 (558)
312 3bzy_B ESCU; auto cleavage pro 25.2 43 0.0015 24.7 2.5 22 292-313 29-50 (83)
313 2q3b_A Cysteine synthase A; py 25.1 54 0.0019 30.3 3.9 52 198-256 71-122 (313)
314 3m07_A Putative alpha amylase; 25.1 29 0.001 35.9 2.2 33 281-313 194-226 (618)
315 4aee_A Alpha amylase, catalyti 25.1 25 0.00086 36.9 1.7 31 282-312 304-334 (696)
316 2prs_A High-affinity zinc upta 24.9 3.2E+02 0.011 24.6 9.2 71 227-307 175-250 (284)
317 3jug_A Beta-mannanase; TIM-bar 24.7 66 0.0023 30.5 4.5 17 241-257 61-77 (345)
318 3l49_A ABC sugar (ribose) tran 24.6 1.2E+02 0.0042 26.7 6.3 63 240-307 28-90 (291)
319 2v03_A Cysteine synthase B; py 24.6 97 0.0033 28.5 5.6 52 198-256 65-116 (303)
320 3l21_A DHDPS, dihydrodipicolin 24.6 47 0.0016 30.9 3.3 57 252-308 24-89 (304)
321 4aec_A Cysteine synthase, mito 24.5 62 0.0021 31.8 4.3 52 198-256 179-230 (430)
322 2ya0_A Putative alkaline amylo 24.5 31 0.0011 36.3 2.3 31 282-312 247-277 (714)
323 8abp_A L-arabinose-binding pro 24.5 1.6E+02 0.0056 26.1 7.2 65 239-309 24-89 (306)
324 3ecs_A Translation initiation 24.2 3.4E+02 0.012 25.2 9.2 98 198-309 125-229 (315)
325 3s5o_A 4-hydroxy-2-oxoglutarat 23.9 49 0.0017 30.8 3.3 55 254-308 25-88 (307)
326 4g81_D Putative hexonate dehyd 23.9 1.4E+02 0.0047 26.8 6.3 84 198-291 12-104 (255)
327 3g1w_A Sugar ABC transporter; 23.9 1.9E+02 0.0066 25.7 7.5 67 239-310 26-94 (305)
328 3fkr_A L-2-keto-3-deoxyarabona 23.9 42 0.0014 31.3 2.8 56 254-309 19-83 (309)
329 3cpr_A Dihydrodipicolinate syn 23.9 58 0.002 30.2 3.8 56 254-309 27-91 (304)
330 3o74_A Fructose transport syst 23.7 1.5E+02 0.0051 25.8 6.6 12 243-254 28-39 (272)
331 3flu_A DHDPS, dihydrodipicolin 23.4 48 0.0016 30.7 3.1 55 254-308 18-81 (297)
332 1tjy_A Sugar transport protein 23.2 1.4E+02 0.0047 27.1 6.4 63 240-307 26-89 (316)
333 3aie_A Glucosyltransferase-SI; 23.2 40 0.0014 36.2 2.8 29 284-312 687-715 (844)
334 3dz1_A Dihydrodipicolinate syn 23.2 45 0.0015 31.2 2.9 55 254-308 19-81 (313)
335 3rot_A ABC sugar transporter, 23.0 1.4E+02 0.0047 26.7 6.3 67 239-310 25-94 (297)
336 1ifk_A Inovirus; helical virus 22.9 1.7E+02 0.0057 19.2 5.8 42 5-48 7-48 (51)
337 3ujp_A Mn transporter subunit; 22.9 1.5E+02 0.0052 27.4 6.5 65 235-306 196-265 (307)
338 2ioj_A Hypothetical protein AF 22.8 2.8E+02 0.0096 21.8 8.6 39 264-308 64-103 (139)
339 3ezx_A MMCP 1, monomethylamine 22.8 3.3E+02 0.011 23.5 8.5 129 171-311 41-185 (215)
340 3tbh_A O-acetyl serine sulfhyd 22.6 61 0.0021 30.4 3.8 52 198-256 76-127 (334)
341 3ttq_A Dextransucrase; (beta/a 22.3 43 0.0015 36.8 2.8 31 282-312 905-935 (1108)
342 3tak_A DHDPS, dihydrodipicolin 22.1 53 0.0018 30.2 3.1 55 254-308 12-75 (291)
343 1y7l_A O-acetylserine sulfhydr 22.0 61 0.0021 30.0 3.6 52 198-256 66-117 (316)
344 3bbl_A Regulatory protein of L 22.0 2.9E+02 0.01 24.2 8.3 7 354-360 190-196 (287)
345 1ji1_A Alpha-amylase I; beta/a 21.9 31 0.001 35.8 1.6 33 281-313 230-266 (637)
346 2pju_A Propionate catabolism o 21.9 2.2E+02 0.0077 24.9 7.1 59 230-305 112-174 (225)
347 3qze_A DHDPS, dihydrodipicolin 21.7 49 0.0017 30.9 2.9 55 254-308 34-97 (314)
348 3ayr_A Endoglucanase; TIM barr 21.6 1.3E+02 0.0044 28.5 6.0 17 240-256 68-84 (376)
349 3mio_A DHBP synthase, 3,4-dihy 21.5 1.4E+02 0.0049 25.9 5.5 35 273-307 158-193 (206)
350 3egc_A Putative ribose operon 21.4 1E+02 0.0036 27.4 5.0 10 196-205 11-20 (291)
351 3k1d_A 1,4-alpha-glucan-branch 21.4 33 0.0011 36.2 1.7 32 282-313 305-336 (722)
352 1iv0_A Hypothetical protein; r 21.2 2.5E+02 0.0087 21.0 6.4 55 258-312 35-95 (98)
353 3gvc_A Oxidoreductase, probabl 21.2 1.7E+02 0.0057 26.3 6.4 82 198-289 32-119 (277)
354 3k8k_A Alpha-amylase, SUSG; al 21.1 49 0.0017 34.5 2.9 31 282-312 99-129 (669)
355 2q5c_A NTRC family transcripti 21.1 3.8E+02 0.013 22.7 8.3 54 227-284 52-105 (196)
356 1xky_A Dihydrodipicolinate syn 20.9 58 0.002 30.2 3.1 56 254-309 23-87 (301)
357 3nbm_A PTS system, lactose-spe 20.9 1E+02 0.0035 23.7 4.1 59 271-345 4-62 (108)
358 2whl_A Beta-mannanase, baman5; 20.9 76 0.0026 28.8 4.0 16 241-256 38-53 (294)
359 2ojp_A DHDPS, dihydrodipicolin 20.9 58 0.002 30.0 3.1 56 254-309 12-76 (292)
360 1vi1_A Fatty acid/phospholipid 20.8 1.9E+02 0.0065 27.2 6.8 122 196-345 95-228 (345)
361 2ab1_A Hypothetical protein; H 20.8 1.9E+02 0.0067 22.7 5.8 50 260-311 48-97 (122)
362 3klk_A Glucansucrase; native f 20.7 48 0.0016 36.4 2.8 29 284-312 740-768 (1039)
363 2r8w_A AGR_C_1641P; APC7498, d 20.5 61 0.0021 30.5 3.3 55 254-308 45-108 (332)
364 3aml_A OS06G0726400 protein; s 20.4 36 0.0012 36.2 1.7 32 282-313 243-274 (755)
365 3h75_A Periplasmic sugar-bindi 20.2 1.4E+02 0.0048 27.5 5.8 67 239-311 26-95 (350)
366 4h27_A L-serine dehydratase/L- 20.1 3.1E+02 0.011 25.8 8.3 51 198-255 97-147 (364)
367 2rgy_A Transcriptional regulat 20.1 2.3E+02 0.0078 25.0 7.1 7 196-202 11-17 (290)
No 1
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-46 Score=389.58 Aligned_cols=360 Identities=43% Similarity=0.772 Sum_probs=300.2
Q ss_pred cCcchhhHHHHHHHHhhhhhccccccc--cCCCCCCCCCCCCc-HHHHHHHHHHhC--CCCCCC-CCceeeeecCCCCcc
Q 013675 69 LVPGVNKYIEAEKQKVVDKMQSGVKSK--REGWWTELPRAGLG-VGVIEKLKEEKG--KDVVWQ-GKCSGTVYIGGSEAE 142 (438)
Q Consensus 69 ~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~lP~~g~~-~~i~~~~~~~~~--~~~~~~-~~~~g~~~~~~~~~~ 142 (438)
.+|++++++++++.+++.++..++.+. +.....+||++|++ ++++++++++.. ++..|. |+++|++|+++..
T Consensus 2 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~-- 79 (497)
T 3mc6_A 2 GSPFLRGTVEKEVTKVKQSIEDELIRSDSQLMNFPQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDD-- 79 (497)
T ss_dssp -----------------------------CCCCCSSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHH--
T ss_pred CCCchHHHHHHHHHHHHHHHHHhhcCCccccccccCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCchH--
Confidence 579999999999999998888877654 34677899999999 999999999843 577777 9999998887644
Q ss_pred hHHHHHHHHHHHhhccCCCCcccchhHHHHHHHHHHHHHHHhCCC-CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHh
Q 013675 143 GHFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNK-EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNK 221 (438)
Q Consensus 143 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~~~~~~~a~l~g~~-~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~ 221 (438)
+.+.+.+.+..+.+.|+++++.+|+..++++++++++++++|++ ... ++++|+|||+|+.+++++++++...+
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~-----~~~~~~ggt~a~~~a~~a~~~~~~~~ 153 (497)
T 3mc6_A 80 -LIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTG-----CGTTTSGGTESLLLACLSAKMYALHH 153 (497)
T ss_dssp -HHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTC-----CEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCC-----eEEEcCcHHHHHHHHHHHHHHHHHhc
Confidence 77888899988888899999999999999999999999999998 232 45999999999999999999877666
Q ss_pred cCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHH
Q 013675 222 RGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELAL 300 (438)
Q Consensus 222 ~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~ 300 (438)
+|..+++|+++.++|+++.++++.+|++++.||+++ ++.+|+++|+++|+++|++|++++|+||+|.++|+++|+++|+
T Consensus 154 ~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~la~ 233 (497)
T 3mc6_A 154 RGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQ 233 (497)
T ss_dssp SCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTHHH
T ss_pred CCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHHHH
Confidence 788788999999999999999999999999999998 8999999999999999999999999999999999999999999
Q ss_pred HcCCeEEEeccccchhhhhhhhcCCC-CCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCc
Q 013675 301 SHGTCLHVDLCLGGFVLPFAKKLGYP-IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGL 379 (438)
Q Consensus 301 ~~~i~lhVD~a~gg~~~pf~~~~g~~-~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~ 379 (438)
+||+++|||+||++++.||++..|+. +|++++...|+|++++++||++++|.|+|+++++++.+....+...+.|.++.
T Consensus 234 ~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 313 (497)
T 3mc6_A 234 KYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGL 313 (497)
T ss_dssp HTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSC
T ss_pred HhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCC
Confidence 99999999999999999988766652 55788888999999999999999999999999998877776666777888887
Q ss_pred cCCCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccc
Q 013675 380 YVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVL-FPMFLPP 436 (438)
Q Consensus 380 ~~~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~~ 436 (438)
+.+++..|+|++..++++|++++.++.+|+++..++..++++++++.|++ +||+++.
T Consensus 314 ~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~ 371 (497)
T 3mc6_A 314 YGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIM 371 (497)
T ss_dssp BCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEEC
T ss_pred cCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 78888899999999999999999999999999999999999999999999 7988753
No 2
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=100.00 E-value=3.7e-43 Score=365.30 Aligned_cols=332 Identities=51% Similarity=0.952 Sum_probs=299.4
Q ss_pred CCCCCCCCCCCCc-HHHHHHHHHH-hCCCCCCC-CCceeeeecCCCCcchHHHHHHHHHHHhhccCCCCcccchhHHHHH
Q 013675 97 EGWWTELPRAGLG-VGVIEKLKEE-KGKDVVWQ-GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFE 173 (438)
Q Consensus 97 ~~~~~~lP~~g~~-~~i~~~~~~~-~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e 173 (438)
......+|++|.+ ++++++++++ ..+...|. ++++|+++++... +.+.+.+++..+.+.|++++..+|+..++|
T Consensus 65 ~~~~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~le 141 (514)
T 3mad_A 65 FPSHARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEH---HIAFLNEVYALQSQSNPLHPDLWPSTAKFE 141 (514)
T ss_dssp SCCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHH---HHHHHHHHHHHHTTCCTTCTTTCHHHHHHH
T ss_pred cCccCCCCCCCCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCC---HHHHHHHHHHHHhhcCCcccccChHHHHHH
Confidence 3456789999999 9999999987 45566676 8889998876555 677888888888899999999999999999
Q ss_pred HHHHHHHHHHhCCCC--CCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEE
Q 013675 174 AEVIAMTAALLGNKE--KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLW 251 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~--~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~ 251 (438)
+++++++++++|++. +. ++|++|+|||+|+.+++++++.....++|..+++|+++.++|+++.++++.+|++++
T Consensus 142 ~~l~~~la~~~g~~~~~~~----v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~ 217 (514)
T 3mad_A 142 AEVVAMTAHMLGGDAAGGT----VCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLV 217 (514)
T ss_dssp HHHHHHHHHHTTGGGGTSC----CEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHcCCCCccCC----cceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcCCeeE
Confidence 999999999999984 23 577999999999999999999876655677779999999999999999999999999
Q ss_pred EeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCc
Q 013675 252 RVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (438)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~ 331 (438)
.||+++++.+|+++|+++|+++|++|++++|+||+|.++|+++|+++|++||+++|+|+||+++..||.+..|.+.++++
T Consensus 218 ~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~ 297 (514)
T 3mad_A 218 RTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFD 297 (514)
T ss_dssp EECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS
T ss_pred EeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888887667788
Q ss_pred cCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHHHHHH
Q 013675 332 FSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLE 411 (438)
Q Consensus 332 ~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g~~~ 411 (438)
+...|+|++++++||++++|.|+|+++++++......+....+|.++.+..++..|++++..++++|+++..++.+++++
T Consensus 298 ~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~ 377 (514)
T 3mad_A 298 FRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLD 377 (514)
T ss_dssp TTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHH
Confidence 88999999999999999999999999999988777776677788888777788889999988889999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCccc
Q 013675 412 NTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 412 ~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
..++..++++++.+.|+++|++++
T Consensus 378 ~~~~~~~~~~~l~~~L~~~~g~~~ 401 (514)
T 3mad_A 378 ATRRILQAADRLKAGVRAIPSLKI 401 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTCEE
T ss_pred HHHHHHHHHHHHHHHHhhCCCeEE
Confidence 999999999999999999988765
No 3
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.6e-43 Score=361.07 Aligned_cols=328 Identities=19% Similarity=0.179 Sum_probs=267.7
Q ss_pred cCCCCCCCCCCCCc-HHHHHHHHHH-hCCCCCCC-CCceeeeecCCCCcchHHHHHHHHHHHhhccCCCCcccchhHHHH
Q 013675 96 REGWWTELPRAGLG-VGVIEKLKEE-KGKDVVWQ-GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARF 172 (438)
Q Consensus 96 ~~~~~~~lP~~g~~-~~i~~~~~~~-~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 172 (438)
+...+.++|++|.+ +++++++.+. .++...|+ |++.|+++.+.. .+.++.+++....+.|...++.+|+..++
T Consensus 44 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~~~~p~~~~l 119 (481)
T 4e1o_A 44 RAQLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPHMHAYYPALTS----WPSLLGDMLADAINCLGFTWASSPACTEL 119 (481)
T ss_dssp GGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTSTTBCSSSCCCCC----HHHHHHHHHHHHHCCCCSSTTTCHHHHHH
T ss_pred HHhcCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeCCCCCC----HHHHHHHHHHHHhCcccCCcCCCcHHHHH
Confidence 34566789999999 9999999997 67888888 999999866554 46788888888889999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCC----CCCccceeEcCChHHHHHHHHHHHHHHHHHh---cCC--------CCCeEEecCCCcC
Q 013675 173 EAEVIAMTAALLGNKEKA----SGGQVCGNMTSGGTESILLAVKSSRDYMRNK---RGI--------TRPEMIIPVSAHS 237 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~----~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~---~G~--------~~~~Viv~~~~h~ 237 (438)
|+++.+|+++++|.+... +.+.-.|++|+|||+||++|+.++|++...+ .|. ++++|+++..+|+
T Consensus 120 E~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~ 199 (481)
T 4e1o_A 120 EMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHS 199 (481)
T ss_dssp HHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCH
T ss_pred HHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchH
Confidence 999999999999998541 0001167999999999999999999865321 010 2368999999999
Q ss_pred cHHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccC------cEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEecc
Q 013675 238 AYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRN------TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (438)
Q Consensus 238 s~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~------t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a 311 (438)
++.+++++.|++++.||+++++++|+++|+++|+++ |++|++++++|++|.++|+++|+++|++||+|+|||+|
T Consensus 200 s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA 279 (481)
T 4e1o_A 200 SVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAA 279 (481)
T ss_dssp HHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECT
T ss_pred HHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehh
Confidence 999999999999999999989999999999999865 78999999999999999999999999999999999999
Q ss_pred ccchhhhhhhhcCCCCCCCccCCCC---ccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCC-------ccC
Q 013675 312 LGGFVLPFAKKLGYPIPPFDFSVQG---VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGG-------LYV 381 (438)
Q Consensus 312 ~gg~~~pf~~~~g~~~p~~~~~~~g---vdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~-------~~~ 381 (438)
||++.+. .|.++....| +|++++++|||+++|+|+|+++++++......+...+.|... .+.
T Consensus 280 ~g~~~~~--------~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 351 (481)
T 4e1o_A 280 YAGTAFL--------CPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFM 351 (481)
T ss_dssp TGGGGGG--------SGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGG
T ss_pred hHHHHHh--------ChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcc
Confidence 9987653 1223333345 499999999999999999999999887644332222222111 122
Q ss_pred CCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 013675 382 SPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLPP 436 (438)
Q Consensus 382 ~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 436 (438)
..++.++|.. ...++|++++.+|.+|+++++++..++++++++.|+++|++++.
T Consensus 352 ~~~~~~~r~~-~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 405 (481)
T 4e1o_A 352 HWQIPLSRRF-RSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIP 405 (481)
T ss_dssp GGSSSSCCCC-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECC
T ss_pred cccccCCCCc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 3355566553 34599999999999999999999999999999999999998763
No 4
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=1.3e-42 Score=357.65 Aligned_cols=327 Identities=16% Similarity=0.135 Sum_probs=260.0
Q ss_pred cCCCCCCCCCCCCc-HHHHHHHHHH-hCCCCCCC-CCceeeeecCCCCcchHHHHHHHHHHHhhccCCCCcccchhHHHH
Q 013675 96 REGWWTELPRAGLG-VGVIEKLKEE-KGKDVVWQ-GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARF 172 (438)
Q Consensus 96 ~~~~~~~lP~~g~~-~~i~~~~~~~-~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 172 (438)
+...+.++|++|.+ +++++++.+. .++...|+ |+++|+++.+.. ..+++.+++....+.|...++.+|+..++
T Consensus 39 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~----~~~~~~~~l~~~~n~~~~~~~~~p~~~~l 114 (475)
T 3k40_A 39 KPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYFPTANS----YPAIVADMLSGAIACIGFTWIASPACTEL 114 (475)
T ss_dssp GGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSSCCCCC----HHHHHHHHHHHHHCCCSSSCCCCHHHHHH
T ss_pred HHhcCCCCCCCCCCHHHHHHHHHHHHhccCCCCCCcCceeeCCCCCc----HHHHHHHHHHHHhCccccCccCCcHHHHH
Confidence 34567789999999 9999999997 67888888 999999866554 46788888888889999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCC---CCCccceeEcCChHHHHHHHHHHHHHHHHHh-----cCC------CCCeEEecCCCcCc
Q 013675 173 EAEVIAMTAALLGNKEKA---SGGQVCGNMTSGGTESILLAVKSSRDYMRNK-----RGI------TRPEMIIPVSAHSA 238 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~---~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~-----~G~------~~~~Viv~~~~h~s 238 (438)
|+++++|+++++|.+... +++.-.|++|+|||+||++|+.++|++...+ +++ .+++|+++..+|++
T Consensus 115 E~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s 194 (475)
T 3k40_A 115 EVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSS 194 (475)
T ss_dssp HHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHH
T ss_pred HHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHH
Confidence 999999999999998531 0000157999999999999999998765321 111 12579999999999
Q ss_pred HHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccC------cEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRN------TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~------t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+.+++++.|++++.||+++++ +|+++|+++|+++ |++|++++++|++|.++|+++|+++|++||+|+|||+||
T Consensus 195 ~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~ 273 (475)
T 3k40_A 195 VERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAY 273 (475)
T ss_dssp HHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHh
Confidence 999999999999999999899 9999999999865 788999999999999999999999999999999999999
Q ss_pred cchhhhhhhhcCCCCCCCccCCCC---ccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccC-----CC--ccCC
Q 013675 313 GGFVLPFAKKLGYPIPPFDFSVQG---VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWS-----GG--LYVS 382 (438)
Q Consensus 313 gg~~~pf~~~~g~~~p~~~~~~~g---vdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~-----g~--~~~~ 382 (438)
|++.+. .|.+.....| +|++++++|||+++|.|+|+++++++......+...+.|. +. .+..
T Consensus 274 ~~~~~~--------~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 345 (475)
T 3k40_A 274 AGSAFI--------CPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRH 345 (475)
T ss_dssp GGGGGG--------SGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC------------------------
T ss_pred HHHHHh--------CHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCccc
Confidence 987552 1122222334 5999999999999999999999998876443222222221 11 1233
Q ss_pred CCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 013675 383 PTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLPP 436 (438)
Q Consensus 383 ~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 436 (438)
.++.++|+. ..+++|++++.+|.+|+++++++..++++++++.|+++|++++.
T Consensus 346 ~~~~~sr~~-~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~ 398 (475)
T 3k40_A 346 WQIPLGRRF-RALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELA 398 (475)
T ss_dssp ---CCCGGG-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEES
T ss_pred ccccCCCcc-cHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 455566653 35699999999999999999999999999999999999998763
No 5
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=1e-41 Score=353.95 Aligned_cols=321 Identities=16% Similarity=0.137 Sum_probs=266.4
Q ss_pred CCCCCCCCCCc-HHHHHHHHHHhCCCCCCC-CCceeeeecCCCCcchHHHHHHHHHHHhhccCCCCcccchhHHHHHHHH
Q 013675 99 WWTELPRAGLG-VGVIEKLKEEKGKDVVWQ-GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEV 176 (438)
Q Consensus 99 ~~~~lP~~g~~-~~i~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~~~ 176 (438)
...++|++|.+ ++++++++++......|+ |+++|+++.+.. ...++.+++....+.|...|..+|+..++|+++
T Consensus 65 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~f~~~~~~~~~----~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~ 140 (511)
T 3vp6_A 65 FNLELSDHPESLEQILVDCRDTLKYGVRTGHPRFFNQLSTGLD----IIGLAGEWLTSTANTNMFTYEIAPVFVLMEQIT 140 (511)
T ss_dssp BCCCCCSSCCCHHHHHHHHHHHHHTSCCTTSTTEESSSSCCCC----HHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCceEeecCCCc----HHHHHHHHHHHHhccCCCCcccCchHHHHHHHH
Confidence 67789999999 999999998855555566 999999865544 578888898888899999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHH---HhcCC---CCCeEEecCCCcCcHHHHHhhcCc--
Q 013675 177 IAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMR---NKRGI---TRPEMIIPVSAHSAYDKAAQYFNI-- 248 (438)
Q Consensus 177 ~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~---~~~G~---~~~~Viv~~~~h~s~~~a~~~~Gi-- 248 (438)
++|+++++|++.+. -.|++|+|||+|+..++.++++... .++|+ ++++|+++..+|+++.++++.+|+
T Consensus 141 ~~~l~~~~g~~~~~----~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~ 216 (511)
T 3vp6_A 141 LKKMREIVGWSSKD----GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGT 216 (511)
T ss_dssp HHHHHHHHTCCSSS----CEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCG
T ss_pred HHHHHHHhCCCCCC----CceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHcCCCC
Confidence 99999999998532 1669999999999999999987531 12332 346899999999999999999998
Q ss_pred -EEEEeeCCCCCccCHHHHHHhhccC------cEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhh
Q 013675 249 -KLWRVPVDKEFRADVKAIKKYINRN------TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 249 -~v~~v~~~~~~~~d~~~Le~~I~~~------t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~ 321 (438)
+++.||+++++.+|+++|+++|+++ |++|++++|+|++|.++|+++|+++|++||+|+|||+||+++.++
T Consensus 217 ~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~--- 293 (511)
T 3vp6_A 217 DNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLM--- 293 (511)
T ss_dssp GGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGG---
T ss_pred CcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhh---
Confidence 9999999999999999999999875 899999999999999999999999999999999999999998774
Q ss_pred hcCCCCCCCccCCC---CccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCC---------ccCCCCccCCC
Q 013675 322 KLGYPIPPFDFSVQ---GVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGG---------LYVSPTVAGSR 389 (438)
Q Consensus 322 ~~g~~~p~~~~~~~---gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~---------~~~~~~~~gsr 389 (438)
.|+++.... ++|++++++|||+++|.|+|+++++++...+..+...+.|... .+...++.++|
T Consensus 294 -----~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r 368 (511)
T 3vp6_A 294 -----SRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGR 368 (511)
T ss_dssp -----CTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSC
T ss_pred -----ChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCC
Confidence 334444444 4599999999999999999999999887654433222333211 11223455565
Q ss_pred CCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 013675 390 PGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLPP 436 (438)
Q Consensus 390 ~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 436 (438)
+. .++++|++++.+|.+|+++++++..++++++++.|+++|++++.
T Consensus 369 ~~-~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~ 414 (511)
T 3vp6_A 369 HV-DIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMV 414 (511)
T ss_dssp CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEES
T ss_pred ch-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 54 34599999999999999999999999999999999999998764
No 6
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=1.1e-40 Score=341.22 Aligned_cols=324 Identities=21% Similarity=0.323 Sum_probs=263.5
Q ss_pred CCCCCCCCCCCCc-HHHHHHHHHHh--CCCCCCC-CCceeeeecCCCCcchHHHHHHHHHHHhhccCCCCcccchhHHHH
Q 013675 97 EGWWTELPRAGLG-VGVIEKLKEEK--GKDVVWQ-GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARF 172 (438)
Q Consensus 97 ~~~~~~lP~~g~~-~~i~~~~~~~~--~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 172 (438)
.....+||++|++ ++++++++++. ++...++ +.+.+ .+ .. ..+.+++...++.|+.++..+|+..++
T Consensus 12 ~~~~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~-~~---~~-----~~v~e~~~~a~~~~~~~~~~~~~~~~l 82 (452)
T 2dgk_A 12 IAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQ-TW---DD-----ENVHKLMDLSINKNWIDKEEYPQSAAI 82 (452)
T ss_dssp ---CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSC-CC---CC-----HHHHHHHHHTTTCBTTCTTTCHHHHHH
T ss_pred hccCCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeC-CC---ch-----HHHHHHHHHHhccCCCChhhChhHHHH
Confidence 4556789999999 99999999974 4555565 55443 11 11 245677777778888888999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHH---hcCC--CCCeEEecCCCcCcHHHHHhhcC
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRN---KRGI--TRPEMIIPVSAHSAYDKAAQYFN 247 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~---~~G~--~~~~Viv~~~~h~s~~~a~~~~G 247 (438)
++++++++++++|++.++. ++..|++|+|||+|+.++++++++.... .+|. ++++|+++. .|+++.++++.+|
T Consensus 83 ~~~~~~~la~l~g~~~~~~-~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G 160 (452)
T 2dgk_A 83 DLRCVNMVADLWHAPAPKN-GQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWD 160 (452)
T ss_dssp HHHHHHHHHHHTTCCCCTT-SCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCcccc-cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcC
Confidence 9999999999999986410 0013699999999999999998764321 2453 246999999 9999999999999
Q ss_pred cEEEEeeCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHc------CCeEEEeccccchhhhhh
Q 013675 248 IKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH------GTCLHVDLCLGGFVLPFA 320 (438)
Q Consensus 248 i~v~~v~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~------~i~lhVD~a~gg~~~pf~ 320 (438)
++++.||+++ ++.+|+++|+++|+++|++|++++|+|+||.++|+++|+++|+++ |+|+|||+||++++.||+
T Consensus 161 ~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~ 240 (452)
T 2dgk_A 161 VELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFV 240 (452)
T ss_dssp CEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHH
T ss_pred ceEEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhh
Confidence 9999999987 799999999999999999999999999999999999999999996 999999999999988764
Q ss_pred hhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHH
Q 013675 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (438)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aa 400 (438)
... . ++++...++|++++++|||+++|.++|+++++++......+...+.|.++.+...+..++|++...+++|++
T Consensus 241 ~~~---~-~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aa 316 (452)
T 2dgk_A 241 APD---I-VWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYE 316 (452)
T ss_dssp CTT---C-CCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHH
T ss_pred Ccc---c-hhhcCCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHH
Confidence 321 1 355566789999999999999999999999988765433444445666554444567889998778899999
Q ss_pred HHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 401 LMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 401 l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
++.+|.+|++++.++..++++++.+.|++++++++
T Consensus 317 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 351 (452)
T 2dgk_A 317 FLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEF 351 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEE
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 99999999999999999999999999999988765
No 7
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=4e-40 Score=340.08 Aligned_cols=327 Identities=15% Similarity=0.150 Sum_probs=257.0
Q ss_pred CCCCCCCCCCCCc-HHHHHHHHHH-hCCCCCCC-CCceeeeecCCCCcchHHHHHHHHHHHhhccCCCCcccchhHHHHH
Q 013675 97 EGWWTELPRAGLG-VGVIEKLKEE-KGKDVVWQ-GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFE 173 (438)
Q Consensus 97 ~~~~~~lP~~g~~-~~i~~~~~~~-~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e 173 (438)
...+.++|++|.+ +++++++++. .++...|+ |++.|++..+.. ....+.+++..+.+.|..++..+|...++|
T Consensus 40 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~n~~~~~~~~~~~~~~le 115 (486)
T 1js3_A 40 PLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYFPTASS----YPAMLADMLCGAIGCIGFSWAASPACTELE 115 (486)
T ss_dssp GGSCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSSCCCCC----HHHHHHHHHHHHHCCCCSSGGGCHHHHHHH
T ss_pred HhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeCCCCCC----HHHHHHHHHHHHhCcCccccccChhHHHHH
Confidence 4556788999999 9999999996 56777786 899998755444 577888888888888888899999999999
Q ss_pred HHHHHHHHHHhCCCCCCC---CCccceeEcCChHHHHHHHHHHHHHHHHHh---c-CC-------CCCeEEecCCCcCcH
Q 013675 174 AEVIAMTAALLGNKEKAS---GGQVCGNMTSGGTESILLAVKSSRDYMRNK---R-GI-------TRPEMIIPVSAHSAY 239 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~~~~---~~~v~g~~t~ggt~a~~~al~a~~~~~~~~---~-G~-------~~~~Viv~~~~h~s~ 239 (438)
+++++|+++++|++.+.. ++.-.|++|+|||+|+++++.++++....+ + |- ++..|+++..+|+++
T Consensus 116 ~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~ 195 (486)
T 1js3_A 116 TVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSV 195 (486)
T ss_dssp HHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHH
T ss_pred HHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHHH
Confidence 999999999999985310 000156999999999999999988643210 1 20 012378899999999
Q ss_pred HHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCc------EEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEecccc
Q 013675 240 DKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNT------VLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 240 ~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t------~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~g 313 (438)
.++++.+|++++.||+++++.+|+++|+++|+++| .+|++++|+|++|.++|+++|+++|++||+|+|||+|||
T Consensus 196 ~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g 275 (486)
T 1js3_A 196 ERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYA 275 (486)
T ss_dssp HHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTG
T ss_pred HHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhH
Confidence 99999999999999998899999999999998766 499999999999999999999999999999999999999
Q ss_pred chhhhhhhhcCCCCCCCcc---CCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCC---------ccC
Q 013675 314 GFVLPFAKKLGYPIPPFDF---SVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGG---------LYV 381 (438)
Q Consensus 314 g~~~pf~~~~g~~~p~~~~---~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~---------~~~ 381 (438)
++.++ .|.+.. ...++|++++++|||+++|.|+|+++++++......+...+.|..+ .+.
T Consensus 276 ~~~~~--------~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 347 (486)
T 1js3_A 276 GSAFI--------CPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYR 347 (486)
T ss_dssp GGGGG--------STTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCSCCCGG
T ss_pred HHHHH--------CHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCcc
Confidence 87753 112221 2346899999999999999999999999876432222111222111 112
Q ss_pred CCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 013675 382 SPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLPP 436 (438)
Q Consensus 382 ~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 436 (438)
..++.++|... .+++|++++.+|.+|+++..++..++++++.+.|+++|++++.
T Consensus 348 ~~~~~~~rr~~-~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 401 (486)
T 1js3_A 348 HWQLPLGRRFR-SLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVC 401 (486)
T ss_dssp GSSSCSCCCCT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEC
T ss_pred ccCCCCCCchh-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 22334444432 3499999999999999999999999999999999999998763
No 8
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=5.4e-39 Score=333.20 Aligned_cols=319 Identities=15% Similarity=0.137 Sum_probs=255.7
Q ss_pred CCCCCCCCCCc-HHHHHHHHHHhC-CCCCCCCCceeeeecCCCCcchHHHHHHHHHHHhhccCCCCcccchhHHHHHHHH
Q 013675 99 WWTELPRAGLG-VGVIEKLKEEKG-KDVVWQGKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEV 176 (438)
Q Consensus 99 ~~~~lP~~g~~-~~i~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~~~ 176 (438)
.+.++|++|.+ +++++++++... ....|++++.++++.+.. ...++.+++..+.+.|...++.+|...++|.++
T Consensus 62 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~----~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~ 137 (504)
T 2okj_A 62 FNLELSDHPESLEQILVDCRDTLKYGVRTGHPRFFNQLSTGLD----IIGLAGEWLTSTANTNMFTYEIAPVFVLMEQIT 137 (504)
T ss_dssp BCCCCCSSCCCHHHHHHHHHHHHHTSCCTTCTTEESSSSCCCC----HHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHHhhccCCCCCCCEEEEccCCCC----HHHHHHHHHHHhhccCCCchhhChHHHHHHHHH
Confidence 56789999999 999999988744 334456888887755444 466777888888899988899999999999999
Q ss_pred HHHHHHHhCCCC-CCCCCccceeEcCChHHHHHHHHHHHHHHHH---HhcCC---CCCeEEecCCCcCcHHHHHhhcCc-
Q 013675 177 IAMTAALLGNKE-KASGGQVCGNMTSGGTESILLAVKSSRDYMR---NKRGI---TRPEMIIPVSAHSAYDKAAQYFNI- 248 (438)
Q Consensus 177 ~~~~a~l~g~~~-~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~---~~~G~---~~~~Viv~~~~h~s~~~a~~~~Gi- 248 (438)
++|+++++|++. .. .|++|+|||+|+++++++++++.. .++|. ++.+|+++..+|+++.++++.+|+
T Consensus 138 ~~~la~~~g~~~~~~-----~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g 212 (504)
T 2okj_A 138 LKKMREIVGWSSKDG-----DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFG 212 (504)
T ss_dssp HHHHHHHHTCCSSSC-----EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSC
T ss_pred HHHHHHHhCCCCCCC-----CEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCC
Confidence 999999999984 22 569999999999999999986421 11332 123799999999999999999987
Q ss_pred --EEEEeeCCCCCccCHHHHHHhhcc------CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhh
Q 013675 249 --KLWRVPVDKEFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (438)
Q Consensus 249 --~v~~v~~~~~~~~d~~~Le~~I~~------~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~ 320 (438)
+++.||+++++++|+++|+++|++ +|++|++++|+|++|.++|+++|+++|++||+|+|||+||+++.++
T Consensus 213 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~-- 290 (504)
T 2okj_A 213 TDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLM-- 290 (504)
T ss_dssp GGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGG--
T ss_pred cccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHh--
Confidence 899999988999999999999986 5899999999999999999999999999999999999999998764
Q ss_pred hhcCCCCCCCccC---CCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCC-C-c-------cCCCCccCC
Q 013675 321 KKLGYPIPPFDFS---VQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG-G-L-------YVSPTVAGS 388 (438)
Q Consensus 321 ~~~g~~~p~~~~~---~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g-~-~-------~~~~~~~gs 388 (438)
.+.++.. ..++|++++++|||+++|.|+|+++++++++....+...+.|.. + . +...+++++
T Consensus 291 ------~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 364 (504)
T 2okj_A 291 ------SRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCG 364 (504)
T ss_dssp ------CTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSS
T ss_pred ------CHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCC
Confidence 1122222 23679999999999988999999999987654432222233321 1 0 112233444
Q ss_pred -CCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 013675 389 -RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLPP 436 (438)
Q Consensus 389 -r~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 436 (438)
|.+++ ++|++++.+|.+|++++.++..++++++.+.|+++|++++.
T Consensus 365 rr~~~l--~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 411 (504)
T 2okj_A 365 RHVDIF--KFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMV 411 (504)
T ss_dssp CBCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEES
T ss_pred CCccHH--HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 44443 89999999999999999999999999999999999888753
No 9
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=9.4e-39 Score=332.27 Aligned_cols=318 Identities=19% Similarity=0.212 Sum_probs=252.3
Q ss_pred CCCCCCCCCCc-HHHHHHHHHHhCC-CCCCCCCceeeeecCCCCcchHHHHHHHHHHHhhccCCCCcccchhHHHHHHHH
Q 013675 99 WWTELPRAGLG-VGVIEKLKEEKGK-DVVWQGKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEV 176 (438)
Q Consensus 99 ~~~~lP~~g~~-~~i~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~~~ 176 (438)
...++|++|.+ ++++++++++... ...|++++.+++..+.. ...++.+++..+.+.+...++.+|+..++|.++
T Consensus 78 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~----~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~ 153 (515)
T 2jis_A 78 LDLELRSQGESQKQILERCRAVIRYSVKTGHPRFFNQLFSGLD----PHALAGRIITESLNTSQYTYEIAPVFVLMEEEV 153 (515)
T ss_dssp HCCCCCSSCCCHHHHHHHHHHHHHHSCCTTSTTEESSSCCCCC----HHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCeEEEeeCCCC----HHHHHHHHHHHHhccCCCchhhchHHHHHHHHH
Confidence 45779999999 9999999987443 33345778777665444 356667888877788888899999999999999
Q ss_pred HHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHH---HhcCC---CCCeEEecCCCcCcHHHHHhhcCc--
Q 013675 177 IAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMR---NKRGI---TRPEMIIPVSAHSAYDKAAQYFNI-- 248 (438)
Q Consensus 177 ~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~---~~~G~---~~~~Viv~~~~h~s~~~a~~~~Gi-- 248 (438)
++|+++++|++.+ .|++|+|||+|+++++++++++.. ..+|. .+.+|+++..+|+++.++++.+|+
T Consensus 154 ~~~la~l~g~~~~------~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~ 227 (515)
T 2jis_A 154 LRKLRALVGWSSG------DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGT 227 (515)
T ss_dssp HHHHHHHHTCSSC------EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCG
T ss_pred HHHHHHHhCCCCC------CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCC
Confidence 9999999999844 559999999999999999986431 11341 123899999999999999999998
Q ss_pred -EEEEeeCCCCCccCHHHHHHhhcc------CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhh
Q 013675 249 -KLWRVPVDKEFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 249 -~v~~v~~~~~~~~d~~~Le~~I~~------~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~ 321 (438)
+++.||+++++.+|+++|+++|++ +|++|++++|+|++|.++|+++|+++|++||+|+|||++|+++.++
T Consensus 228 ~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~--- 304 (515)
T 2jis_A 228 DSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLL--- 304 (515)
T ss_dssp GGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGG---
T ss_pred CcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHh---
Confidence 999999998999999999999986 4899999999999999999999999999999999999999998875
Q ss_pred hcCCCCCCCccCC---CCccEEEeCCCCCCCCCCCcEEEEEecc-cccccchhcccccC-CC--------ccCCCCcc-C
Q 013675 322 KLGYPIPPFDFSV---QGVTSISVDVHKYGLAPKGTSVVLYRNR-EIRKHQFVAVTEWS-GG--------LYVSPTVA-G 387 (438)
Q Consensus 322 ~~g~~~p~~~~~~---~gvdsis~s~hK~~~~p~g~g~l~~r~~-~~~~~~~~~~~~~~-g~--------~~~~~~~~-g 387 (438)
.+.+.... .++|++++++|||+++|.|+|+++++++ ++.+..+...+.|. ++ .+...++. +
T Consensus 305 -----~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 379 (515)
T 2jis_A 305 -----SQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCG 379 (515)
T ss_dssp -----CTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSS
T ss_pred -----ChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCC
Confidence 22232222 3679999999999989999999999987 54432221122221 11 11222333 4
Q ss_pred CCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 013675 388 SRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLPP 436 (438)
Q Consensus 388 sr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 436 (438)
+|.+++ ++|++++.+|.+|++++.++..++++++.+.|+++|++++.
T Consensus 380 rr~~al--~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 426 (515)
T 2jis_A 380 RRVDCL--KLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELV 426 (515)
T ss_dssp CCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEES
T ss_pred CcccHH--HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 455544 89999999999999999999999999999999999988753
No 10
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=3.3e-38 Score=327.02 Aligned_cols=324 Identities=21% Similarity=0.319 Sum_probs=265.8
Q ss_pred CCCCCCCCCCCc-HHHHHHHHHHh--CCCCCCCCCceeeeecCCCCcchHHHHHHHHHHHhhccCCCCcccchhHHHHHH
Q 013675 98 GWWTELPRAGLG-VGVIEKLKEEK--GKDVVWQGKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEA 174 (438)
Q Consensus 98 ~~~~~lP~~g~~-~~i~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~ 174 (438)
.....+|++|.+ +++.+.+++.. .++. .+..+.+..... ...+.+++...++.|..+++.+|...++|+
T Consensus 27 lp~~~~p~~~~~~~~~~~~~~~~i~l~gnp----~~~l~s~~t~~~----~~~v~~~l~~~~~~~~~~~~~~p~~~~le~ 98 (502)
T 3hbx_A 27 LPRFKMPENSIPKEAAYQIINDELMLDGNP----RLNLASFVTTWM----EPECDKLIMSSINKNYVDMDEYPVTTELQN 98 (502)
T ss_dssp CCSSSCCSSCCCHHHHHHHHHHHGGGSCCG----GGBTTCCSCCCC----CHHHHHHHHHTTTCBTTCTTTCHHHHHHHH
T ss_pred ccCCCCCCCCCCHHHHHHHHHHHhccCCCC----CceeccccCCCC----CHHHHHHHHHHhccCCCChhcChhHHHHHH
Confidence 445589999999 99999998863 3332 211111111111 123556666667778888888999999999
Q ss_pred HHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHH---hcC--CCCCeEEecCCCcCcHHHHHhhcC
Q 013675 175 EVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRN---KRG--ITRPEMIIPVSAHSAYDKAAQYFN 247 (438)
Q Consensus 175 ~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~---~~G--~~~~~Viv~~~~h~s~~~a~~~~G 247 (438)
++++++++++|++ +++ .+.|++|+|||+|+++++.+++..... .+| ..+++|+++..+|+++.++++++|
T Consensus 99 ~~~~~la~l~g~~~~~~~---~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G 175 (502)
T 3hbx_A 99 RCVNMIAHLFNAPLEEAE---TAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFE 175 (502)
T ss_dssp HHHHHHHHHTTCCCCSSC---CCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCccccc---CCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcC
Confidence 9999999999998 332 246788999999999999998764322 124 234599999999999999999999
Q ss_pred cEEEEeeCCCC-CccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHc------CCeEEEeccccchhhhhh
Q 013675 248 IKLWRVPVDKE-FRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH------GTCLHVDLCLGGFVLPFA 320 (438)
Q Consensus 248 i~v~~v~~~~~-~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~------~i~lhVD~a~gg~~~pf~ 320 (438)
++++.||++++ +.+|+++|+++|+++|++|++++|+|++|.++|+++|+++|+++ |+|+|||+||++++.||.
T Consensus 176 ~~~~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~ 255 (502)
T 3hbx_A 176 VELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFL 255 (502)
T ss_dssp CEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHH
T ss_pred ceeEEEecCCCcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhh
Confidence 99999999875 99999999999999999999999999999999999999999999 999999999999988765
Q ss_pred hhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHH
Q 013675 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (438)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aa 400 (438)
... . ++++...++|++++++|||+++|.|+|++++++++.....+...+.|.++......+.++|++..++++|++
T Consensus 256 ~~~---~-~~~~~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~a 331 (502)
T 3hbx_A 256 YPE---L-EWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (502)
T ss_dssp CTT---C-CCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHH
T ss_pred Ccc---c-ccccCCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHH
Confidence 321 1 456667899999999999999999999999998877665555566777766555667789998888899999
Q ss_pred HHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 013675 401 LMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLPP 436 (438)
Q Consensus 401 l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 436 (438)
++.+|.+|+.++.++..++++++++.|++++++++.
T Consensus 332 l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (502)
T 3hbx_A 332 LIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIV 367 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 999999999999999999999999999999888763
No 11
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=3.9e-37 Score=318.67 Aligned_cols=314 Identities=19% Similarity=0.248 Sum_probs=248.1
Q ss_pred CCCCCCCc-HHHHHHHHHH-hCCCCCCC-CCceeeeecCCCCcchHHHHHHHHHHHhhccCCCCcccchhHHHHHHHHHH
Q 013675 102 ELPRAGLG-VGVIEKLKEE-KGKDVVWQ-GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIA 178 (438)
Q Consensus 102 ~lP~~g~~-~~i~~~~~~~-~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~~~~~ 178 (438)
++|++|.+ +++++++.+. .++...|. +.+.++...+.. ...++.+.+....+.|...+..+|...++|+++++
T Consensus 72 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~----~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~ 147 (497)
T 2qma_A 72 DLDNKNAPLKSVIDDVAELVAKNAIFTQHPDCIAHLHTPPL----MPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVN 147 (497)
T ss_dssp CSSSCCCCHHHHHHHHHHHTTTTSCCTTSTTBCSSSCCCCB----HHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeCCCCCc----HHHHHHHHHHHhhcccccchhhChHHHHHHHHHHH
Confidence 57999999 9999999875 67777787 788888766544 45666666666667777778889999999999999
Q ss_pred HHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHH--------hcCCC---CC-eEEecCCCcCcHHHHHhhc
Q 013675 179 MTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRN--------KRGIT---RP-EMIIPVSAHSAYDKAAQYF 246 (438)
Q Consensus 179 ~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~--------~~G~~---~~-~Viv~~~~h~s~~~a~~~~ 246 (438)
|+++++|+++.. .|++|+|||+|+.++++++|++... .+|.. .+ +|+++...|+++.++++.+
T Consensus 148 ~la~~~g~~~~~-----~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~ 222 (497)
T 2qma_A 148 WLCDKYDLSEKA-----DGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWM 222 (497)
T ss_dssp HHHHHTTCCTTC-----EEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHT
T ss_pred HHHHHhCCCCCC-----CeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHc
Confidence 999999997644 5699999999999999998865331 13322 14 7999999999999999999
Q ss_pred Cc---EEEEeeCCCCCccCHHHHHHhhccC------cEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhh
Q 013675 247 NI---KLWRVPVDKEFRADVKAIKKYINRN------TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVL 317 (438)
Q Consensus 247 Gi---~v~~v~~~~~~~~d~~~Le~~I~~~------t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~ 317 (438)
|+ +++.||+++++.+|+++|+++|+++ +.+|++++++|++|.++|+++|+++|++||+|+|||++|+++..
T Consensus 223 g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~ 302 (497)
T 2qma_A 223 GLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALI 302 (497)
T ss_dssp TSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGG
T ss_pred CCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHH
Confidence 87 8999999989999999999999764 45899999999999999999999999999999999999999887
Q ss_pred hhhhhcCCCCCCCccCC---CCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCC------CccCCCCccCC
Q 013675 318 PFAKKLGYPIPPFDFSV---QGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG------GLYVSPTVAGS 388 (438)
Q Consensus 318 pf~~~~g~~~p~~~~~~---~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g------~~~~~~~~~gs 388 (438)
+. ++.... .++|++++|+|||+++|.++|+++++++...+. +.....|.. ..+...++.++
T Consensus 303 ~~---------~~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~~~~~~~~~~-~~~~~~yl~~~~~~~~~~~~~~~~~~ 372 (497)
T 2qma_A 303 LS---------SHKSRLKGVERAHSISVDFHKLFYQTISCGALLVNDKSNFKF-LLHHADYLNREHDELPNLVDKSIATT 372 (497)
T ss_dssp GS---------TTGGGGTTGGGCSEEEEETTTTTCCCSSCEEEEESCGGGGGG-GCC--------------------CCS
T ss_pred hC---------cchHhhcCcccCCEEEEcchhccCCCcceEEEEEeCHHHHHH-hcCCchhcCCccccCCCccccCCCCC
Confidence 52 122112 357999999999999999999999998764432 111122211 11122233455
Q ss_pred CCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 389 r~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
|... ..++|++++.+|.+|++++.++..++++++.+.|+++|++++
T Consensus 373 r~~~-al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 418 (497)
T 2qma_A 373 KRFD-ALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFEL 418 (497)
T ss_dssp CCCT-HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred Cchh-HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 5433 238999999999999999999999999999999999988875
No 12
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.4e-33 Score=281.37 Aligned_cols=317 Identities=28% Similarity=0.464 Sum_probs=253.3
Q ss_pred CCCCCCCc-HHHHHHHHHHhCCCCCCC-CCceeeeecCCCCcchHHHHHHHHHHHhhccCCCCcccchhHHHHHHHHHHH
Q 013675 102 ELPRAGLG-VGVIEKLKEEKGKDVVWQ-GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAM 179 (438)
Q Consensus 102 ~lP~~g~~-~~i~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~~~~~~ 179 (438)
.||+.|.+ +++++.+.++......|. +.+.|.......+ .+.+++...+..+..++...++..+++.+++++
T Consensus 4 ~lp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 77 (397)
T 3f9t_A 4 NMQEKGVSEKEILEELKKYRSLDLKYEDGNIFGSMCSNVLP------ITRKIVDIFLETNLGDPGLFKGTKLLEEKAVAL 77 (397)
T ss_dssp SCCSSCCCHHHHHHHHHHHHTTSCCGGGTCBCSCSCCCCCT------HHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEecCCCcH------HHHHHHHHHHhhcCCCcccChhHHHHHHHHHHH
Confidence 58999999 999999999877666666 6777776443333 234555555555555666677889999999999
Q ss_pred HHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHh--cCC---CCCeEEecCCCcCcHHHHHhhcCcEEEEee
Q 013675 180 TAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNK--RGI---TRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (438)
Q Consensus 180 ~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~--~G~---~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~ 254 (438)
+++++|.++++ + ++|+|||+|+.+++++++.....+ .|. ..++|+++.++|+++.++++..|++++.+|
T Consensus 78 la~~~~~~~~~----i--~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~ 151 (397)
T 3f9t_A 78 LGSLLNNKDAY----G--HIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAP 151 (397)
T ss_dssp HHHHTTCTTCE----E--EEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEEC
T ss_pred HHHHhCCCCCC----E--EEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEe
Confidence 99999998765 5 899999999999999988642211 010 138999999999999999999999999999
Q ss_pred CCCCCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCC----CC
Q 013675 255 VDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPI----PP 329 (438)
Q Consensus 255 ~~~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~----p~ 329 (438)
+++++.+|+++|++++++ ++++|++++|+||+|.++|+++|.++|++||+++|+|++|+++..++... +... .+
T Consensus 152 ~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~-~~~~~~~~~~ 230 (397)
T 3f9t_A 152 IKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDD-KYKKKGVNYK 230 (397)
T ss_dssp BCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCG-GGCCTTCCCC
T ss_pred eCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhccc-cccccccccc
Confidence 999999999999999999 99999999999999999999999999999999999999999988775432 1111 14
Q ss_pred CccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHHHH
Q 013675 330 FDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGY 409 (438)
Q Consensus 330 ~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g~ 409 (438)
+++.. ++|++++++||++.+|.++|+++++++.+.+......+.+.++. .....|++++..++++++++..++..++
T Consensus 231 ~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 307 (397)
T 3f9t_A 231 FDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGYKRYLDVDAPYLTETR--QATILGTRVGFGGACTYAVLRYLGREGQ 307 (397)
T ss_dssp CSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGGGGGTCEECTTSSSSE--ECSSCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred ccccc-cCCeEEEccccccCCCCCceEEEEeCHHHHHhhccCCccccCCC--ccccccccccchHHHHHHHHHHHhHHHH
Confidence 56666 89999999999988899999999988765533211112222211 2344578888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 410 LENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 410 ~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
++..++..++++++.+.|+++ ++++
T Consensus 308 ~~~~~~~~~~~~~l~~~L~~~-g~~~ 332 (397)
T 3f9t_A 308 RKIVNECMENTLYLYKKLKEN-NFKP 332 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCEE
Confidence 999999999999999999988 6653
No 13
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=100.00 E-value=3.4e-33 Score=281.14 Aligned_cols=295 Identities=15% Similarity=0.121 Sum_probs=222.0
Q ss_pred CCCCCCCCc-HHHHHHHHHH-hCCCCCC---------CCCceee--------eecCCCCcchHHHHHHHHHHHhhccCCC
Q 013675 101 TELPRAGLG-VGVIEKLKEE-KGKDVVW---------QGKCSGT--------VYIGGSEAEGHFSLINEACSMFAHTNPL 161 (438)
Q Consensus 101 ~~lP~~g~~-~~i~~~~~~~-~~~~~~~---------~~~~~g~--------~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 161 (438)
..+|++|++ ++|...++++ .....+| +|+++|. .+++.. ...+++ ..|+
T Consensus 21 ~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~~-------~~~d~l----~~~~- 88 (450)
T 3bc8_A 21 GKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIG-------RSGDIS----AVQP- 88 (450)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCBC-------C-----------CC-
T ss_pred ccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecchh-------HHHHHH----HhCc-
Confidence 349999999 9999999987 3344455 3677766 334321 112222 2366
Q ss_pred CcccchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChH-HHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHH
Q 013675 162 HLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGT-ESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD 240 (438)
Q Consensus 162 ~~~~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt-~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~ 240 (438)
.+..+|+..++|+.+..|+.+++|.+... .|++++|+| .++.+++.++|... .+| +.|+++..+|.|+.
T Consensus 89 ~~~~~~~~~~~e~~~~~~~~~~lGlp~~~-----~~~lV~GaT~~~~a~~L~aar~~~--~~~---~~viv~r~aHkSv~ 158 (450)
T 3bc8_A 89 KAAGSSLLNKITNSLVLNVIKLAGVHSVA-----SCFVVPMATGMSLTLCFLTLRHKR--PKA---KYIIWPRIDQKSCF 158 (450)
T ss_dssp SBHHHHHHHHHHHHHHHHHHHHHTCTTCC-----EEEEESSCHHHHHHHHHHHHHHHC--TTC---CEEEEECCCCHHHH
T ss_pred cccCCcHHHHHHHHHHHHHHHhCCCCCCc-----eEEEECCHHHHHHHHHHHHcchhh--cCC---CEEEEECCcHHHHH
Confidence 67788899999999999999999998775 679999998 66666666666521 124 78999999999999
Q ss_pred HHHhhcCcEEEEeeC---CCCCccCHHHHHHhhcc----CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEecccc
Q 013675 241 KAAQYFNIKLWRVPV---DKEFRADVKAIKKYINR----NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 241 ~a~~~~Gi~v~~v~~---~~~~~~d~~~Le~~I~~----~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~g 313 (438)
+++.+.|++.+.|+. ++.+.+|+++|+++|++ ++.+|+.+.+++.+|.+||+++|+++|++||+|+|||+|||
T Consensus 159 kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G 238 (450)
T 3bc8_A 159 KSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYG 238 (450)
T ss_dssp HHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTT
T ss_pred HHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCc
Confidence 999999999988876 45789999999999965 45667776666667799999999999999999999999999
Q ss_pred chhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCch
Q 013675 314 GFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGL 393 (438)
Q Consensus 314 g~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ 393 (438)
+....+ .. .|.-.+...++|+++.|+|||+++|.|+|++++|+++..+.. ...|.+ +...+.
T Consensus 239 ~~~~~~-~~----l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~---~~~~~g----------~~s~Sp 300 (450)
T 3bc8_A 239 LQSSKC-MH----LIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDI---SKMYPG----------RASASP 300 (450)
T ss_dssp TTCHHH-HH----HHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHH---HHHSCS----------CBCSHH
T ss_pred hhhhhh-Hh----HHHHHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHH---HHHhhc----------CCcccH
Confidence 754421 11 000001114789999999999999999999999877655322 122322 122233
Q ss_pred HHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCC---Cccc
Q 013675 394 IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFP---MFLP 435 (438)
Q Consensus 394 ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---g~~~ 435 (438)
.+.+|++++.+|.++|++.+++..++++++++.|++++ ++++
T Consensus 301 sL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~ 345 (450)
T 3bc8_A 301 SLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERL 345 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCcee
Confidence 46899999999999999999999999999999998887 6543
No 14
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=100.00 E-value=5.7e-32 Score=276.97 Aligned_cols=298 Identities=18% Similarity=0.148 Sum_probs=218.3
Q ss_pred CCCCCCCCCc-HHHHHHHHHHh-CCCCCCCCCceeeeecCCCCcchHHHHHHHHHHHh----------hccCCCCcccch
Q 013675 100 WTELPRAGLG-VGVIEKLKEEK-GKDVVWQGKCSGTVYIGGSEAEGHFSLINEACSMF----------AHTNPLHLDIFQ 167 (438)
Q Consensus 100 ~~~lP~~g~~-~~i~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------~~~n~~~~~~~~ 167 (438)
..++|++|++ +++.+.+++.. .....|......+ ..+..+...+....+..+ ...|+ .+..+|
T Consensus 55 ~~~lp~~g~~~~~i~~~~~~~~~~~~~~yld~aa~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 129 (456)
T 2z67_A 55 HRKIPENGIDDEKIKLFLKFLSMMDTDKDPKSVRIG----EREARTYSKIHEELSSGFCHGIGRSGNLVDPQP-KASGAS 129 (456)
T ss_dssp HCSCCSSCCCHHHHHHHHHHHHTTBGGGCTTCEECS----SCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCT-TBHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHhccccccccccccc----cccccccccccCccccccCCCccHHHHHHhhCc-ccccCc
Confidence 3469999999 88888877762 2222221111101 111111122222111111 22344 445667
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChH-HHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhc
Q 013675 168 SVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGT-ESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF 246 (438)
Q Consensus 168 ~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt-~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~ 246 (438)
+..++++++++++++++|++++ +++|+||| .++.+++.+++.+. +| ++|+++..+|+++.++++..
T Consensus 130 ~~~~~~~~~~~~la~~~g~~~~-------~~~t~g~te~a~~~al~~~~~~~---~~---~~vi~~~~~h~s~~~~~~~~ 196 (456)
T 2z67_A 130 IMYALTNKILESFFKQLGLNVH-------AIATPISTGMSISLCLSAARKKY---GS---NVVIYPYASHKSPIKAVSFV 196 (456)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCE-------EEEESSCHHHHHHHHHHHHHHHH---CC---CEEEEECCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCCC-------EEEeCcHHHHHHHHHHHHHHHhc---CC---CEEEEECCCcHHHHHHHHHc
Confidence 7899999999999999999752 38999999 56776887766421 34 67999999999999999999
Q ss_pred CcEEEEeeC---CCCCccCHHHHHHhh-c----cCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhh
Q 013675 247 NIKLWRVPV---DKEFRADVKAIKKYI-N----RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLP 318 (438)
Q Consensus 247 Gi~v~~v~~---~~~~~~d~~~Le~~I-~----~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~p 318 (438)
|++++.+++ ++++.+|+++|+++| + .++++|+.++|||++|.++|+++|+++|+++|+|+|||+||+++..+
T Consensus 197 G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g 276 (456)
T 2z67_A 197 GMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNY 276 (456)
T ss_dssp TCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHH
T ss_pred CCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHH
Confidence 999999987 668899999999999 5 37888999999999999999999999999999999999999877653
Q ss_pred hhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHH
Q 013675 319 FAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAW 398 (438)
Q Consensus 319 f~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~ 398 (438)
+.... . -.... ++|++++++|||+++|.|+|+++++++++.... .+.|. |++.+...+++|
T Consensus 277 ~~~~~---~--~~~~~-~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l---~~~~~----------g~~~~~~~~~~~ 337 (456)
T 2z67_A 277 YLEKL---K--KAFKY-RVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEI---SLSYP----------GRASATPVVNTL 337 (456)
T ss_dssp HHHHH---H--HHHTS-CCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHH---HTTSC----------SCBCSHHHHHHH
T ss_pred hhHHH---H--HhhCC-CCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhc---CcCCC----------CCCCCCHHHHHH
Confidence 32110 0 00111 789999999999899999999999776554322 12222 334445577899
Q ss_pred HHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCC---Ccc
Q 013675 399 AALMSLGQEGYLENTKAIMEVSESIQKGLVLFP---MFL 434 (438)
Q Consensus 399 aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---g~~ 434 (438)
+++..++.+|++++.++..++++++.+.|+++| |+.
T Consensus 338 aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~ 376 (456)
T 2z67_A 338 VSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGK 376 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCE
Confidence 999999999999999999999999999999885 654
No 15
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.97 E-value=1.7e-29 Score=259.92 Aligned_cols=310 Identities=19% Similarity=0.177 Sum_probs=227.8
Q ss_pred CCCCCCCCCCCc-HHHHHHHHHHhCCCCCC-C-CCceeeeecCCCCcchHHHHHHHHHHHhhccCCCCcc-cchhHHHHH
Q 013675 98 GWWTELPRAGLG-VGVIEKLKEEKGKDVVW-Q-GKCSGTVYIGGSEAEGHFSLINEACSMFAHTNPLHLD-IFQSVARFE 173 (438)
Q Consensus 98 ~~~~~lP~~g~~-~~i~~~~~~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-~~~~~~~~e 173 (438)
....+|| +++ .++++++.++...+... . ..+.|.+++...+ +++.++...+.+.|+++++ .+++..+++
T Consensus 37 ~~~~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg~~~~~~~p-----~v~~~~~~~~~~~~~~~~~~~~~g~~~l~ 109 (474)
T 1wyu_B 37 EVPPRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNP-----KLHEEAARLFADLHPYQDPRTAQGALRLM 109 (474)
T ss_dssp SSCCCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBTTTCCCCCC-----HHHHHHHHTTSSCCTTSCGGGCHHHHHHH
T ss_pred cCCCCCC--CCCHHHHHHHHHHHHhCCCCcccCccccccccccCCH-----HHHHHHHHHHHhcCCCCchhhChHHHHHH
Confidence 3446788 789 99999999986544432 2 3344544443333 3344444445667887776 799999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcC--CCCCeEEecCCCcCcHHHHHhhcCcEEE
Q 013675 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG--ITRPEMIIPVSAHSAYDKAAQYFNIKLW 251 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G--~~~~~Viv~~~~h~s~~~a~~~~Gi~v~ 251 (438)
.++++++++++|++.. .++|+|||+|+.+++++++.+.. .+| ..+++|+++.+.|+++.++++..|++++
T Consensus 110 ~~l~~~la~~~g~~~~-------~~~~~ggt~a~~~al~~~~~~~~-~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv 181 (474)
T 1wyu_B 110 WELGEYLKALTGMDAI-------TLEPAAGAHGELTGILIIRAYHE-DRGEGRTRRVVLVPDSAHGSNPATASMAGYQVR 181 (474)
T ss_dssp HHHHHHHHHHHTCSEE-------ECCCSSHHHHHHHHHHHHHHHHH-HTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHCCCce-------eecChHHHHHHHHHHHHHHHHHH-hcCCccCCCEEEEeCCcChhhHHHHHHCCCEEE
Confidence 9999999999999742 27889999999999988875432 255 2345999999999999999999999999
Q ss_pred EeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccc-cCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCC
Q 013675 252 RVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGII-DPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (438)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~i-ddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~ 330 (438)
.||+++++.+|+++|+++|+++|++|++++|| ++|.+ +|+++|+++|+++|+++|+|++|+.+... ..
T Consensus 182 ~v~~~~~~~~d~~~L~~~i~~~t~~v~~~~pn-~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g----------~~ 250 (474)
T 1wyu_B 182 EIPSGPEGEVDLEALKRELGPHVAALMLTNPN-TLGLFERRILEISRLCKEAGVQLYYDGANLNAIMG----------WA 250 (474)
T ss_dssp EECBCTTSSBCHHHHHHHCSTTEEEEEECSSC-TTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTT----------TC
T ss_pred EecCCCCCCcCHHHHHHhhCCCceEEEEECCC-CCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhcc----------CC
Confidence 99998899999999999999999999999985 69999 79999999999999999999999654431 11
Q ss_pred ccCCCCccEEEeCCCCCCCCCC-----CcEEEEEecccccccchhcccccCCCcc-C--C-C-----CccCCCCCchHHH
Q 013675 331 DFSVQGVTSISVDVHKYGLAPK-----GTSVVLYRNREIRKHQFVAVTEWSGGLY-V--S-P-----TVAGSRPGGLIAG 396 (438)
Q Consensus 331 ~~~~~gvdsis~s~hK~~~~p~-----g~g~l~~r~~~~~~~~~~~~~~~~g~~~-~--~-~-----~~~gsr~~~~ia~ 396 (438)
+....|+|++++|+||++.+|. |+|+++++++......-.. ..+.|..+ . . + ...++.+....++
T Consensus 251 ~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a 329 (474)
T 1wyu_B 251 RPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPL-VERGEEGFYLDFDRPKSIGRVRSFYGNFLALVR 329 (474)
T ss_dssp CHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCE-EEECSSCEEEECCCTTCCCCSSSTTSCHHHHHH
T ss_pred CcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCe-eeccCCeeEecccCcccCcccccCcCcHHHHHH
Confidence 2223468999999999987775 6899998865332111000 00001000 0 0 0 0011111123556
Q ss_pred HHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 397 AWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 397 ~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+|+.+..+|.+++++..++..++++++.+.|+++ |+++
T Consensus 330 a~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~ 367 (474)
T 1wyu_B 330 AWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRV 367 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEe
Confidence 7777777889999999999999999999999987 6665
No 16
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.96 E-value=7.3e-28 Score=245.08 Aligned_cols=324 Identities=16% Similarity=0.153 Sum_probs=220.4
Q ss_pred hhhHHHHHHHHhhhhhccccccc-cCCCCCCCCCCCCc-HHHHHHHHHHhCCCC-CCCCCceeeeecCCCCcchHHHHH-
Q 013675 73 VNKYIEAEKQKVVDKMQSGVKSK-REGWWTELPRAGLG-VGVIEKLKEEKGKDV-VWQGKCSGTVYIGGSEAEGHFSLI- 148 (438)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lP~~g~~-~~i~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~- 148 (438)
+++|++....+.++++..++++. +.. ..+|| +|.+ .++++++..+...+. ++....+++.+....+ ....+++
T Consensus 11 ~~~ml~~~g~~~~~~~~~~~p~~~~~~-~~~lp-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~p-~~v~~~~~ 87 (438)
T 1wyu_A 11 IREMLRRVGAASLEDLFAHLPKEILSP-PIDLP-EPLPEWKVLEELRRLAAQNLPAHKAFLGGGVRSHHVP-PVVQALAA 87 (438)
T ss_dssp HHHHHHHHTCSSTGGGGTTSCGGGSSC-CCCCC-CCCCHHHHHHHHHHHHHTSCCCTTCCCCSSCCCCCCC-HHHHHHHT
T ss_pred HHHHHHHcCCCCHHHHHHhCcHHHhcC-CCCCC-CCCCHHHHHHHHHHHHhcCcCccccccCCCccCCcCc-HHHHHHHh
Confidence 34455555555667777776544 334 77899 8899 999999988743322 2333444443333333 1122222
Q ss_pred -HHHHHHhhccCCCCcccchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCC
Q 013675 149 -NEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRP 227 (438)
Q Consensus 149 -~~~~~~~~~~n~~~~~~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~ 227 (438)
.+. +...++++++.+++..+++.++++++++++|+++++ + ++++|+|.++..++.+++. .+| +
T Consensus 88 ~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~----i--~~~~g~taa~ea~~~a~~~----~~g---d 151 (438)
T 1wyu_A 88 RGEF---LTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIAN----A--SMYDGATALAEGVLLALRE----TGR---M 151 (438)
T ss_dssp SHHH---HHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEEC----S--CBSSHHHHHHHHHHHHHHH----HTC---C
T ss_pred cchh---hhcCCCCcchhhhhHHHHHHHHHHHHHHHhCCCccc----e--EEeCcHHHHHHHHHHHHhc----CCC---C
Confidence 122 234577777889999999999999999999998664 4 8999999554444444331 356 8
Q ss_pred eEEecCCCcCcHHHHH----hhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcC
Q 013675 228 EMIIPVSAHSAYDKAA----QYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHG 303 (438)
Q Consensus 228 ~Viv~~~~h~s~~~a~----~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~ 303 (438)
+|+++.+.|+++..++ +..|++++.+|+ +++.+|+++ |+++|++|++++| |++|.++|+++|+++|+++|
T Consensus 152 ~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g 225 (438)
T 1wyu_A 152 GVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VGEEVGAVVVQNP-NFLGALEDLGPFAEAAHGAG 225 (438)
T ss_dssp EEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CCTTEEEEEEESS-CTTSBCCCHHHHHHHHHHTT
T ss_pred EEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hCCCeEEEEEECC-CCCeEEecHHHHHHHHHHcC
Confidence 9999999999987655 457999999998 567888877 7889999999999 99999999999999999999
Q ss_pred CeEEEecc-ccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCC-----CCCCCCCcEEEEEecccccccchhc----cc
Q 013675 304 TCLHVDLC-LGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHK-----YGLAPKGTSVVLYRNREIRKHQFVA----VT 373 (438)
Q Consensus 304 i~lhVD~a-~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK-----~~~~p~g~g~l~~r~~~~~~~~~~~----~~ 373 (438)
+++|+|+. .+-+..+ . . ...|+|++++|+|| |+++| |+|+++++++ +.+..... ..
T Consensus 226 ~~vivd~d~~a~g~~~--------~---~-~~~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~-~~~~l~~~~~g~~~ 291 (438)
T 1wyu_A 226 ALFVAVADPLSLGVLK--------P---P-GAYGADIAVGDGQSLGLPMGFGGP-HFGFLATKKA-FVRQLPGRLVSETV 291 (438)
T ss_dssp CEEEEECCTTGGGTBC--------C---H-HHHTCSEEEEECTTTTCCCGGGCS-CCEEEEECGG-GGGGCCSCCEEEEE
T ss_pred CEEEEEechhhccCcC--------C---C-ccCCCCEEEECCcccCCCccCCCC-CeeEEEEcHH-HHHhCCCceecccc
Confidence 99997754 2111110 1 1 23478999999888 44567 8999888754 33221100 01
Q ss_pred ccCCCc-c-CC--------CCccCCCCC---chHHHHHHH--HHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 374 EWSGGL-Y-VS--------PTVAGSRPG---GLIAGAWAA--LMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 374 ~~~g~~-~-~~--------~~~~gsr~~---~~ia~~~aa--l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
++.+.. + .+ ....++.+- ..+++++++ +..++.+|++++.++..++++++.+.|+++||+++
T Consensus 292 ~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~ 368 (438)
T 1wyu_A 292 DVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRP 368 (438)
T ss_dssp BTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEE
T ss_pred ccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 111110 0 00 001122221 334565555 77788999999999999999999999999988875
No 17
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.95 E-value=1.9e-27 Score=236.35 Aligned_cols=298 Identities=15% Similarity=0.132 Sum_probs=214.6
Q ss_pred CCCCCCCCc-HHHHHHHHHHhC-CCCCCCCCceeeeecCCCCcchHHHHHHHHHHHhhccCC-------CCcc--cchhH
Q 013675 101 TELPRAGLG-VGVIEKLKEEKG-KDVVWQGKCSGTVYIGGSEAEGHFSLINEACSMFAHTNP-------LHLD--IFQSV 169 (438)
Q Consensus 101 ~~lP~~g~~-~~i~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~-------~~~~--~~~~~ 169 (438)
.++|++|++ +.|.-.+.++.. ...++.+.+ -.|..+..+...++.+..-.+.+.-. .+|. .+..+
T Consensus 39 r~~P~~g~~d~~ie~~l~~la~mdsnn~~~~~----g~GERE~Rv~s~lv~rrh~~~~HGiGRSGd~~~~QPKAaGssll 114 (501)
T 3hl2_A 39 GKCPENGWDESTLELFLHELAIMDSNNFLGNC----GVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLL 114 (501)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHTTBGGGCSSCC----CCSSCCCCCSCHHHHHHTTTCCSCBSCSSCTTCCCTTBHHHHHH
T ss_pred CCCCccCCCHHHHHHHHHHHHhhccCCCcccC----CcccchHHHHHHHHHhhccCcccCCCCccccccCCCCccchHHH
Confidence 359999999 777777777733 333343333 23566666667788766533332211 1221 12223
Q ss_pred HHHHH-HHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCc
Q 013675 170 ARFEA-EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNI 248 (438)
Q Consensus 170 ~~~e~-~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi 248 (438)
.++.+ .+.+|+..+ |++... ..++++|+|.+++.++.++....+. .| +.||+|..+|.|+.+++.+.|+
T Consensus 115 ~~ltn~l~ld~L~~~-G~~~~~-----~~flVnGsTgg~lamilaa~r~~rp-g~---d~VIvpRn~HKSv~kAliL~Gl 184 (501)
T 3hl2_A 115 NKITNSLVLDIIKLA-GVHTVA-----NCFVVPMATGMSLTLCFLTLRHKRP-KA---KYIIWPRIDQKSCFKSMITAGF 184 (501)
T ss_dssp HHHHHHHHHHHHHHT-TCTTCC-----EEEEESSCHHHHHHHHHHHHHHHCT-TC---CEEEEECCCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHc-CCCCCC-----cEEEECcHHHHHHHHHHHHcCcccC-CC---CEEEEecchHHHHHHHHHHcCC
Confidence 44444 445666666 998765 4588999998888887776642211 23 7899999999999999999999
Q ss_pred EEEEeeC---CCCCccCHHHHHHhhccC---cE-EEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhh
Q 013675 249 KLWRVPV---DKEFRADVKAIKKYINRN---TV-LIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 249 ~v~~v~~---~~~~~~d~~~Le~~I~~~---t~-~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~ 321 (438)
++++|+. ++...+|+++++++|++. .. +|+.+.+++..|.++||++|+++|++||+|+|||+|||+...++.+
T Consensus 185 ~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~ 264 (501)
T 3hl2_A 185 EPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMH 264 (501)
T ss_dssp EEEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHH
T ss_pred eEEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhh
Confidence 9999987 346789999999999753 33 4444444443457799999999999999999999999987653321
Q ss_pred hcCCCCCCCccCCCC-ccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHH
Q 013675 322 KLGYPIPPFDFSVQG-VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (438)
Q Consensus 322 ~~g~~~p~~~~~~~g-vdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aa 400 (438)
.|.-.++ .| +|+++.|+||+++.|.|.++++.++++..+.. .. ..+|+++++..+.+|++
T Consensus 265 -----lp~sA~~-~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~---~~----------~yPGr~S~Spsldl~~t 325 (501)
T 3hl2_A 265 -----LIQQGAR-VGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEI---SK----------MYPGRASASPSLDVLIT 325 (501)
T ss_dssp -----HHHHHHH-HSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHH---HH----------TSCSCBCSHHHHHHHHH
T ss_pred -----hHHHHHh-cCCCcEEEecccccceeecCceEEEeCCHHHHHHH---HH----------hCCCCCCCcHHHHHHHH
Confidence 1111122 35 99999999999999999888888887655432 11 22367788888899999
Q ss_pred HHHHcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013675 401 LMSLGQEGYLENTKAIMEVSESIQKGLVLFP 431 (438)
Q Consensus 401 l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~ 431 (438)
+..+|.+||+++.++..+++++|+++|++++
T Consensus 326 LL~lGr~Gy~~ll~e~~ela~~L~~~L~~la 356 (501)
T 3hl2_A 326 LLSLGSNGYKKLLKERKEMFSYLSNQIKKLS 356 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998853
No 18
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.95 E-value=1.7e-26 Score=228.79 Aligned_cols=241 Identities=19% Similarity=0.211 Sum_probs=188.2
Q ss_pred cchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHh
Q 013675 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQ 244 (438)
Q Consensus 165 ~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~ 244 (438)
......++.+++++++++++|.++++ + ++|+|+|+|+.++++++.... .++| ++|+++...|+++..++.
T Consensus 37 ~~~~~~~~~~~~~~~la~~~~~~~~~----i--~~~~g~~~a~~~~~~~~~~~~-~~~g---d~vi~~~~~~~~~~~~~~ 106 (382)
T 4hvk_A 37 YGFKAREAVQEAREKVAKLVNGGGGT----V--VFTSGATEANNLAIIGYAMRN-ARKG---KHILVSAVEHMSVINPAK 106 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEE----E--EEESSHHHHHHHHHHHHHHHH-GGGC---CEEEEETTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCe----E--EEECCchHHHHHHHHHhhhhh-cCCC---CEEEECCCCcHHHHHHHH
Confidence 34556788889999999999998764 5 899999999999999876321 1367 899999999999988766
Q ss_pred h---cCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhh
Q 013675 245 Y---FNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 245 ~---~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~ 321 (438)
. .|++++.+|+++++.+|+++|+++++++|++|++++++||||.+.|+++|.++|++||+ +|+|++++....
T Consensus 107 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~---- 181 (382)
T 4hvk_A 107 FLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQI---- 181 (382)
T ss_dssp HHHHTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTB----
T ss_pred HHHhcCCEEEEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCC----
Confidence 6 49999999999999999999999999999999999999999999999999999999999 999999764332
Q ss_pred hcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHH
Q 013675 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAAL 401 (438)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal 401 (438)
+++....++|+++.++||+ ++|.|+|+++++++.... +.+.++........++.+...++++.+++
T Consensus 182 -------~~~~~~~~~d~~~~s~~K~-~g~~g~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~al 247 (382)
T 4hvk_A 182 -------EVDVEKIGADMLTISSNDI-YGPKGVGALWIRKEAKLQ------PVILGGGQENGLRSGSENVPSIVGFGKAA 247 (382)
T ss_dssp -------CCCHHHHTCSEEEEESGGG-TSCTTCEEEEEETTCCCC------CSSCSSCTGGGTSCSCCCHHHHHHHHHHH
T ss_pred -------CCCchhcCCCEEEEeHHHh-cCCCceEEEEEcCccCcC------cccccCCCcCccccCCcCHHHHHHHHHHH
Confidence 2334445689999999997 789999999988664111 11111111111112222333455555666
Q ss_pred HHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 402 MSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 402 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
. +..+++++..++..++++++.+.|+++|++++
T Consensus 248 ~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 280 (382)
T 4hvk_A 248 E-ITAMEWREEAERLRRLRDRIIDNVLKIEESYL 280 (382)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred H-HHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 5 34578899999999999999999999888764
No 19
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.95 E-value=4.6e-26 Score=226.24 Aligned_cols=240 Identities=18% Similarity=0.207 Sum_probs=185.5
Q ss_pred cchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHh
Q 013675 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQ 244 (438)
Q Consensus 165 ~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~ 244 (438)
..+...+...++++++++++|.++++ + ++|+|||+|+.++++++..+. ..+| ++|+++.++|+++..++.
T Consensus 37 ~~~~~~~~~~~l~~~la~~~g~~~~~----v--~~~~g~t~a~~~~~~~l~~~~-~~~g---d~Vl~~~~~~~~~~~~~~ 106 (382)
T 4eb5_A 37 YGFKAREAVQEAREKVAKLVNGGGGT----V--VFTSGATEANNLAIIGYAMRN-ARKG---KHILVSAVEHMSVINPAK 106 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTEE----E--EEESSHHHHHHHHHHHHHHHH-GGGC---CEEEEETTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCe----E--EEcCchHHHHHHHHHHHHhhc-cCCC---CEEEECCCcchHHHHHHH
Confidence 34456778889999999999997654 5 899999999999999987321 1367 899999999999887776
Q ss_pred h---cCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhh
Q 013675 245 Y---FNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 245 ~---~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~ 321 (438)
. .|++++.+|+++++.+|+++|+++++++|++|++++++||||.+.|+++|.++|+++|++ |+|++++.+..
T Consensus 107 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~---- 181 (382)
T 4eb5_A 107 FLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQI---- 181 (382)
T ss_dssp HHTTTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTB----
T ss_pred HHHhCCcEEEEeccCCCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCc----
Confidence 4 699999999998899999999999999999999999999999999999999999999999 99999873222
Q ss_pred hcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEeccc-ccccchhcccccCCCccCCCCccCCCCCchHHHHHHH
Q 013675 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNRE-IRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (438)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~-~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aa 400 (438)
+++....++|+++.++||+ ++|.|+|+++++++. +.. .+.++........++.+...++++.++
T Consensus 182 -------~~~~~~~~~di~~~s~sK~-~g~~g~G~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a 246 (382)
T 4eb5_A 182 -------EVDVEKIGADMLTISSNDI-YGPKGVGALWIRKEAKLQP-------VILGGGQENGLRSGSENVPSIVGFGKA 246 (382)
T ss_dssp -------CCCHHHHTCSEEEEETGGG-TCCSSCEEEEEETTCCCCC-------SSCSSCTGGGTSCSCCCHHHHHHHHHH
T ss_pred -------ccCccccCCCEEEeehHHh-cCCCceEEEEEccccccCc-------eecCCCccccccCCCccHHHHHHHHHH
Confidence 2233333679999999998 789899999888763 111 111110000111233332334556667
Q ss_pred HHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 401 LMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 401 l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+..+ .+++++..++..++++++.+.|+++|++++
T Consensus 247 l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 280 (382)
T 4eb5_A 247 AEIT-AMEWREEAERLRRLRDRIIDNVLKIEESYL 280 (382)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred HHHH-HHhHHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 7654 457889999999999999999999888754
No 20
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.94 E-value=5.5e-26 Score=228.07 Aligned_cols=245 Identities=14% Similarity=0.123 Sum_probs=194.4
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc--HHHHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--YDKAA 243 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s--~~~a~ 243 (438)
.+...++..++++++++++|.+.++ ..++|+|||+|+.++++++. .+| ++|+++.++|++ +..++
T Consensus 41 ~~~~~~~~~~~~~~la~~~~~~~~~-----~v~~~~sgt~al~~~~~~~~-----~~g---d~Vl~~~~~~~~~~~~~~~ 107 (411)
T 3nnk_A 41 DPAMTHYMNEVMALYRGVFRTENRW-----TMLVDGTSRAGIEAILVSAI-----RPG---DKVLVPVFGRFGHLLCEIA 107 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCSE-----EEEEESCHHHHHHHHHHHHC-----CTT---CEEEEEECSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCc-----EEEECCCcHHHHHHHHHHhc-----CCC---CEEEEecCCchHHHHHHHH
Confidence 4556678889999999999998664 23788999999999999884 367 899999999988 88999
Q ss_pred hhcCcEEEEeeCCCCCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhh
Q 013675 244 QYFNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (438)
Q Consensus 244 ~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~ 322 (438)
+..|++++.+|+++++.+|+++|++++++ +|++|++++++||+|.+.|+++|+++|++||+++|+|++++....
T Consensus 108 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~----- 182 (411)
T 3nnk_A 108 RRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGN----- 182 (411)
T ss_dssp HHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTB-----
T ss_pred HHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCc-----
Confidence 99999999999988999999999999987 899999999999999999999999999999999999999764332
Q ss_pred cCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccc--hhcccccCCCccCC------------------
Q 013675 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQ--FVAVTEWSGGLYVS------------------ 382 (438)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~--~~~~~~~~g~~~~~------------------ 382 (438)
+++....++|+++.++||++++|.|+|+++.+++...... ....+.|.|+....
T Consensus 183 ------~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~ 256 (411)
T 3nnk_A 183 ------PLETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMD 256 (411)
T ss_dssp ------CCCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHH
T ss_pred ------ccchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHh
Confidence 3555666899999999999889999999888754322111 11122343322110
Q ss_pred -----CCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 383 -----PTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 383 -----~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
....++.+...++++.+++..+...|+++..++..++++++.+.|+++ ++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~ 313 (411)
T 3nnk_A 257 YWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM-GLET 313 (411)
T ss_dssp HHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred hhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEe
Confidence 011233333446677778877777789999999999999999999986 6554
No 21
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.94 E-value=2.4e-25 Score=224.61 Aligned_cols=243 Identities=21% Similarity=0.248 Sum_probs=189.1
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhh
Q 013675 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY 245 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~ 245 (438)
.....+...++++++++++|.++++ + ++|+|||+|+.++++++.+... ++| ++|+++.++|+++..++..
T Consensus 63 ~~~~~~~~~~l~~~la~~~~~~~~~----v--~~~~ggt~a~~~a~~~l~~~~~-~~g---d~Vl~~~~~~~~~~~~~~~ 132 (423)
T 3lvm_A 63 GWQAEEAVDIARNQIADLVGADPRE----I--VFTSGATESDNLAIKGAANFYQ-KKG---KHIITSKTEHKAVLDTCRQ 132 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGG----E--EEESSHHHHHHHHHHHHHHHHT-TTC---CEEEEETTSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCCCCe----E--EEeCChHHHHHHHHHHHHHhhc-cCC---CEEEECCccchHHHHHHHH
Confidence 3455677888999999999998765 5 8999999999999998875322 246 8999999999999888755
Q ss_pred c---CcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhh
Q 013675 246 F---NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (438)
Q Consensus 246 ~---Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~ 322 (438)
+ |++++.+|+++++.+|+++|++++++++++|++++++||+|.+.|+++|.++|++||+++++|++++....
T Consensus 133 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~----- 207 (423)
T 3lvm_A 133 LEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKL----- 207 (423)
T ss_dssp HHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-----
T ss_pred HHHcCCEEEEeccCCCCccCHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCC-----
Confidence 5 99999999999999999999999999999999999999999999999999999999999999999875433
Q ss_pred cCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHH
Q 013675 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALM 402 (438)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~ 402 (438)
+++....++|+++.++||+ ++|.|+|+++++++...... ....++........++.+...++++.+++.
T Consensus 208 ------~~~~~~~~~di~~~s~sK~-~g~~g~G~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 276 (423)
T 3lvm_A 208 ------PIDLSQLKVDLMSFSGHKI-YGPKGIGALYVRRKPRVRIE----AQMHGGGHERGMRSGTLPVHQIVGMGEAYR 276 (423)
T ss_dssp ------CCCTTTSCCSEEEEESTTT-TSCSSCEEEEECBTTBCCCC----CSSCSSCTTTTTCCSCCCHHHHHHHHHHHH
T ss_pred ------CcChhhcCCCEEEechHHh-cCCCCeEEEEEeccccCCCC----ccccCCcccccccCCCCCHHHHHHHHHHHH
Confidence 2444556789999999996 78999999888765332211 111111111111223333334555666666
Q ss_pred HHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 403 SLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 403 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+. +.+++..++..++++++.+.|+++|++++
T Consensus 277 ~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 308 (423)
T 3lvm_A 277 IAK-EEMATEMERLRGLRNRLWNGIKDIEEVYL 308 (423)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 543 34788999999999999999999988764
No 22
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.94 E-value=4.7e-26 Score=228.94 Aligned_cols=244 Identities=11% Similarity=0.086 Sum_probs=190.8
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc--HHHHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--YDKAA 243 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s--~~~a~ 243 (438)
.+...++..++++++++++|.+++. + -++++|||+|+.++++++. .+| ++|+++.+.|++ +.+++
T Consensus 39 ~~~~~~~~~~l~~~la~~~g~~~~~----~-~~~~~s~t~al~~~~~~l~-----~~g---d~Vl~~~~~~~~~~~~~~~ 105 (416)
T 3isl_A 39 DPAFTGIMNETMEMLRELFQTKNRW----A-YPIDGTSRAGIEAVLASVI-----EPE---DDVLIPIYGRFGYLLTEIA 105 (416)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCCSE----E-EEEESCHHHHHHHHHHHHC-----CTT---CEEEEEESSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCc----E-EEecCcHHHHHHHHHHHhc-----CCC---CEEEEecCCcccHHHHHHH
Confidence 3556778889999999999998764 2 2488999999999998874 367 899999999998 88889
Q ss_pred hhcCcEEEEeeCCCCCccCHHHHHHhhc-cCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhh
Q 013675 244 QYFNIKLWRVPVDKEFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (438)
Q Consensus 244 ~~~Gi~v~~v~~~~~~~~d~~~Le~~I~-~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~ 322 (438)
+..|++++.+|+++++.+|+++|+++++ ++|++|++++++||+|.+.|+++|.++|++||+++|+|++++.+..
T Consensus 106 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~----- 180 (416)
T 3isl_A 106 ERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGC----- 180 (416)
T ss_dssp HHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTS-----
T ss_pred HhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCC-----
Confidence 9999999999999889999999999998 6899999999999999999999999999999999999999764332
Q ss_pred cCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcc---cccC---------CCc-----------
Q 013675 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAV---TEWS---------GGL----------- 379 (438)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~---~~~~---------g~~----------- 379 (438)
+++....++|+++.++||++++|.|+|+++.+++...... ... ..|. |+.
T Consensus 181 ------~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~-~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~ 253 (416)
T 3isl_A 181 ------EVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIA-ARKKVERGIATQADRAALSGNRPITSNYFDLSQ 253 (416)
T ss_dssp ------CCCTTTTTCSEEECCSSSTTCCCSSEEEEEECHHHHHHHH-TC------------------CCCCSCSTTCHHH
T ss_pred ------CcchhhcCCCEEEecCccccCCCCCeEEEEECHHHHHHhh-ccccccccccccccchhccCCCCCCccccchHH
Confidence 3455566899999999999899999999888754322111 000 0110 000
Q ss_pred -----cCCCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 380 -----YVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 380 -----~~~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.......|+.+...++++.+++..+...|+++..++..++++++.+.|++. ++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~ 313 (416)
T 3isl_A 254 LEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM-GLRL 313 (416)
T ss_dssp HHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred HHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEe
Confidence 001112234444456677788887777779999999999999999999985 6654
No 23
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.94 E-value=2.3e-25 Score=222.97 Aligned_cols=245 Identities=22% Similarity=0.208 Sum_probs=184.8
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCC-eEEecCCCcCcHHHHHh
Q 013675 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRP-EMIIPVSAHSAYDKAAQ 244 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~-~Viv~~~~h~s~~~a~~ 244 (438)
.....+..+++++++++++|+++++ + ++|+|||+|+.++++++..+.. ++| + +|+++...|+++...+.
T Consensus 58 ~~~~~~~~~~l~~~la~~~~~~~~~----v--~~~~g~t~al~~~~~~l~~~~~-~~g---d~~Vl~~~~~~~~~~~~~~ 127 (400)
T 3vax_A 58 GIRAKRGVERAREYLASTVSAEPDE----L--IFTSGATESNNIALLGLAPYGE-RTG---RRHIITSAIEHKAVLEPLE 127 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGG----E--EEESCHHHHHHHHHHTTHHHHH-HHT---CCEEEEETTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCc----E--EEeCCHHHHHHHHHHHHHHhhc-cCC---CCEEEECccccHhHHHHHH
Confidence 3445677888999999999998665 5 8999999999999999863321 256 8 99999999999877666
Q ss_pred h---cCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhh
Q 013675 245 Y---FNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 245 ~---~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~ 321 (438)
. .|++++.+|+++++.+|+++|+++++++|++|++++++||+|.+.|+++|.++|+++|+++++|++++.+..+
T Consensus 128 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~--- 204 (400)
T 3vax_A 128 HLAGRGFEVDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVP--- 204 (400)
T ss_dssp HHHTTTCEEEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSG---
T ss_pred HHHhcCCeEEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCC---
Confidence 5 4999999999999999999999999999999999999999999999999999999999999999998744332
Q ss_pred hcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEE-EecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHH
Q 013675 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVL-YRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (438)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~-~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aa 400 (438)
.+.... +|+++.++||+ ++|.|+|+++ ++++.+........+.+.++........++.+...++++.++
T Consensus 205 --------~~~~~~-~d~~~~s~~K~-~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 274 (400)
T 3vax_A 205 --------GDLTTP-IDMISISGHKI-GAPKGVGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEA 274 (400)
T ss_dssp --------GGGGSC-CSEEEEETGGG-TSCSSCEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHH
T ss_pred --------cChhhc-CcEEEEeHHHh-CCCCceEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHH
Confidence 333334 89999999996 7899999998 887433211000111111111100111222222334445556
Q ss_pred HHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 401 LMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 401 l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+..+ .+++++..++..++++++.+.|+ .+++++
T Consensus 275 l~~~-~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~ 307 (400)
T 3vax_A 275 AKIF-EAEHAQWQVAAQDLRSRLLAGLA-STSFQV 307 (400)
T ss_dssp HHHH-HHSHHHHHHHHHHHHHHHHHHHT-TTTCEE
T ss_pred HHHH-HhhHHHHHHHHHHHHHHHHHhhC-CCCEEE
Confidence 6543 45788999999999999999998 778764
No 24
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.94 E-value=2e-25 Score=222.72 Aligned_cols=243 Identities=15% Similarity=0.065 Sum_probs=183.2
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcH--HHHHh
Q 013675 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY--DKAAQ 244 (438)
Q Consensus 167 ~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~--~~a~~ 244 (438)
+...+...++++++++++|.++++ + ++|+|||+|+.++++++. ++| ++|+++.++|++. ...++
T Consensus 38 ~~~~~~~~~l~~~la~~~g~~~~~----v--~~t~g~t~a~~~~~~~~~-----~~g---d~Vl~~~~~~~~~~~~~~~~ 103 (392)
T 2z9v_A 38 PAFQLLYEKVVDKAQKAMRLSNKP----V--ILHGEPVLGLEAAAASLI-----SPD---DVVLNLASGVYGKGFGYWAK 103 (392)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSCC----E--EESSCTHHHHHHHHHHHC-----CTT---CCEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCE----E--EEeCCchHHHHHHHHHhc-----CCC---CEEEEecCCcccHHHHHHHH
Confidence 455667778999999999997654 5 899999999999999874 366 8999999999875 34556
Q ss_pred hcCcEEEEeeCCCCCccCHHHHHHhhc--cCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhh
Q 013675 245 YFNIKLWRVPVDKEFRADVKAIKKYIN--RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (438)
Q Consensus 245 ~~Gi~v~~v~~~~~~~~d~~~Le~~I~--~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~ 322 (438)
..|++++.+|+++++.+|+++++++++ +++++|++++++||||.+.|+++|.++|+++|+++|+|++++.+..
T Consensus 104 ~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~----- 178 (392)
T 2z9v_A 104 RYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGM----- 178 (392)
T ss_dssp HHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTB-----
T ss_pred HcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCc-----
Confidence 679999999998888899999999994 5799999999999999999999999999999999999999874332
Q ss_pred cCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccch-h-----cccccC---CCccCCCCccCCCCCch
Q 013675 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQF-V-----AVTEWS---GGLYVSPTVAGSRPGGL 393 (438)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~-~-----~~~~~~---g~~~~~~~~~gsr~~~~ 393 (438)
+++....++|+++.++||++++|.|+|+++++++....... . ...++. .+........|+.+...
T Consensus 179 ------~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (392)
T 2z9v_A 179 ------KTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSE 252 (392)
T ss_dssp ------SCCGGGGTCSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHH
T ss_pred ------ccccccccceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHH
Confidence 23333446899999999998899999998887543211110 0 000000 00000111123333334
Q ss_pred HHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 394 IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 394 ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
++++.++++.+...|+++..++..++++++.+.|+++ ++++
T Consensus 253 ~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~ 293 (392)
T 2z9v_A 253 INGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLSV 293 (392)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence 5566777877766678899999999999999999887 6554
No 25
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.93 E-value=2.5e-24 Score=213.66 Aligned_cols=238 Identities=23% Similarity=0.243 Sum_probs=181.5
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHH---
Q 013675 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA--- 243 (438)
Q Consensus 167 ~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~--- 243 (438)
....+...++++++++++|.++++ + ++|+|||+|+.+++++++... ..+| ++|+++.++|+++...+
T Consensus 40 ~~~~~~~~~l~~~la~~~g~~~~~----v--~~~~g~t~a~~~~~~~~~~~~-~~~g---d~vl~~~~~~~~~~~~~~~~ 109 (384)
T 1eg5_A 40 IEANLHMEKAREKVAKVLGVSPSE----I--FFTSCATESINWILKTVAETF-EKRK---RTIITTPIEHKAVLETMKYL 109 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGGG----E--EEESCHHHHHHHHHHHHHHHT-TTTC---CEEEECTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCe----E--EEECCHHHHHHHHHHhhhhhc-cCCC---CEEEECCCCchHHHHHHHHH
Confidence 344567778999999999987665 5 899999999999999987310 1256 89999999999987766
Q ss_pred hhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcC--CeEEEeccccchhhhhhh
Q 013675 244 QYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHG--TCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 244 ~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~--i~lhVD~a~gg~~~pf~~ 321 (438)
+..|++++.+|+++++.+|+++|+++++++|++|++++++||+|.+.|+++|.++|+++| +++|+|++++....
T Consensus 110 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~---- 185 (384)
T 1eg5_A 110 SMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKI---- 185 (384)
T ss_dssp HHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTS----
T ss_pred HhcCCEEEEEccCCCCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCc----
Confidence 677999999999888999999999999999999999999999999999999999999999 99999999862111
Q ss_pred hcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEeccc-ccccchhcccccCCCccCCCCccCCCCCchHHHHHHH
Q 013675 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNRE-IRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (438)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~-~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aa 400 (438)
++++...++|++++++||+ ++|.|+|+++.+++. +.. .+.+.........++.+....+++.++
T Consensus 186 -------~~~~~~~~~di~~~s~sK~-~g~~G~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~~a 250 (384)
T 1eg5_A 186 -------PFSLEKLEVDYASFSAHKF-HGPKGVGITYIRKGVPIRP-------LIHGGGQERGLRSGTQNVPGIVGAARA 250 (384)
T ss_dssp -------CCCCTTTCCSEEEEEGGGG-TSCTTCEEEEECTTSCCCC-------SBCSSCTTTTTBCSCCCHHHHHHHHHH
T ss_pred -------ccCchhcCCCEEEecHHHh-cCCCceEEEEEcCCCcccc-------ccccCcccccccCCCCChHHHHHHHHH
Confidence 2333344789999999998 788889998887652 111 011110000112233333334455666
Q ss_pred HHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 401 LMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 401 l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
++.+ .+++++..++..++++++.+.|++ +++++
T Consensus 251 l~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~ 283 (384)
T 1eg5_A 251 MEIA-VEELSEAAKHMEKLRSKLVSGLMN-LGAHI 283 (384)
T ss_dssp HHHH-HHTHHHHHHHHHHHHHHHHHHHHT-TTCEE
T ss_pred HHHH-HHhHHHHHHHHHHHHHHHHHHhCC-CCeEE
Confidence 6543 456788999999999999999988 56654
No 26
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.93 E-value=7.2e-25 Score=218.23 Aligned_cols=267 Identities=18% Similarity=0.166 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHhhccCCCCcccchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcC
Q 013675 144 HFSLINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG 223 (438)
Q Consensus 144 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G 223 (438)
+.+.+.+.+......++......+.......++++.+++++|.++++ + ++|+|||+|+.+++++++. .+|
T Consensus 32 v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~----v--~~~~g~t~a~~~~~~~~~~----~~g 101 (390)
T 1elu_A 32 ALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNT----I--TITDNVTTGCDIVLWGLDW----HQG 101 (390)
T ss_dssp HHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGG----E--EEESSHHHHHHHHHHHSCC----CTT
T ss_pred HHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHH----E--EEeCChHHHHHHHHhCCCC----CCC
Confidence 34444444443322333322233433456778888999999987665 5 8999999999999998731 256
Q ss_pred CCCCeEEecCCCcCcHHH----HHhhcCcEEEEeeCC--CCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHH
Q 013675 224 ITRPEMIIPVSAHSAYDK----AAQYFNIKLWRVPVD--KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGE 297 (438)
Q Consensus 224 ~~~~~Viv~~~~h~s~~~----a~~~~Gi~v~~v~~~--~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~ 297 (438)
++|+++.++|.++.. .++..|++++.+|++ .++.+|+++|++++++++++|++++++||+|.+.|+++|.+
T Consensus 102 ---d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~ 178 (390)
T 1elu_A 102 ---DEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLAEIMA 178 (390)
T ss_dssp ---CEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHHHHHH
T ss_pred ---CEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCceecCHHHHHH
Confidence 899999999999654 357789999999997 57889999999999999999999999999999999999999
Q ss_pred HHH----HcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhccc
Q 013675 298 LAL----SHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVT 373 (438)
Q Consensus 298 la~----~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~ 373 (438)
+|+ ++|+++++|++|+.+.. +++....++|+++.++|||+++|.|+|+++.+++ +.+.......
T Consensus 179 l~~~~~~~~~~~li~Dea~~~g~~-----------~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~~~~~~~ 246 (390)
T 1elu_A 179 VCRRHQGNYPVRVLVDGAQSAGSL-----------PLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGD-CLGEINPTYV 246 (390)
T ss_dssp HHHHCCSSSCCEEEEECTTTBTTB-----------CCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTT-TGGGCCCCSC
T ss_pred HHhhhhhhcCcEEEEEcccccCCc-----------CCChhhcCCCEEEccccccccCCCceEEEEECHH-hHhhcCCccc
Confidence 999 99999999999874322 2334445789999999998899999999988754 3322111111
Q ss_pred ccCCC-------cc-----CCCCccCCCCCchHHHHHHHHHHHcHHH-HHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 374 EWSGG-------LY-----VSPTVAGSRPGGLIAGAWAALMSLGQEG-YLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 374 ~~~g~-------~~-----~~~~~~gsr~~~~ia~~~aal~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.|... .+ ......|+.+....+++.+++..+...+ +++..++..++++++.+.|+++|++++
T Consensus 247 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 321 (390)
T 1elu_A 247 GWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHC 321 (390)
T ss_dssp CTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred cCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence 11000 00 0011123333333556667777765555 888999999999999999999888764
No 27
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.93 E-value=3.1e-25 Score=220.60 Aligned_cols=242 Identities=12% Similarity=0.148 Sum_probs=186.2
Q ss_pred hhHHHHHHHHHHHHHHHhCCC-CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc--HHHHH
Q 013675 167 QSVARFEAEVIAMTAALLGNK-EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--YDKAA 243 (438)
Q Consensus 167 ~~~~~~e~~~~~~~a~l~g~~-~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s--~~~a~ 243 (438)
+...++.+++++++++++|.+ +++ + ++|+|||+|+.++++++. ++| ++|+++.++|++ +..++
T Consensus 49 ~~~~~~~~~~~~~la~~~g~~~~~~----v--~~~~g~t~a~~~~~~~l~-----~~g---d~vl~~~~~~~~~~~~~~~ 114 (386)
T 2dr1_A 49 KEYRKVHMDTVERLREFLEVEKGEV----L--LVPSSGTGIMEASIRNGV-----SKG---GKVLVTIIGAFGKRYKEVV 114 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSSEE----E--EESSCHHHHHHHHHHHHS-----CTT---CEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcE----E--EEeCChHHHHHHHHHHhh-----cCC---CeEEEEcCCchhHHHHHHH
Confidence 445788889999999999997 332 4 899999999999999874 266 899999999998 88999
Q ss_pred hhcCcEEEEeeCCCCCccCHHHHHHhh--ccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhh
Q 013675 244 QYFNIKLWRVPVDKEFRADVKAIKKYI--NRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 244 ~~~Gi~v~~v~~~~~~~~d~~~Le~~I--~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~ 321 (438)
+..|++++.+|+++++.+|+++|++++ ++++++|++++++||+|.+.|+++|.++|++||+++|+|++|+.+..+
T Consensus 115 ~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--- 191 (386)
T 2dr1_A 115 ESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGAD--- 191 (386)
T ss_dssp HHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBC---
T ss_pred HHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcc---
Confidence 999999999999888899999999999 468999999999999999999999999999999999999998755432
Q ss_pred hcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchh-cccccCCCc------cC-CCCccCCCCCch
Q 013675 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFV-AVTEWSGGL------YV-SPTVAGSRPGGL 393 (438)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~-~~~~~~g~~------~~-~~~~~gsr~~~~ 393 (438)
++....++|+++.++||++.+|.|+|+++.+++ +.+.... ....|.... .. .....++.+...
T Consensus 192 --------~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (386)
T 2dr1_A 192 --------IKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSER-FLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQ 262 (386)
T ss_dssp --------CCTTTTTCSEEEEETTSTTCCCSSCEEEEECHH-HHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHH
T ss_pred --------ccccccCCcEEEEeccccccCCCceEEEEECHH-HHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHH
Confidence 233445789999999999888878999888754 3221100 000010000 00 011122333334
Q ss_pred HHHHHHHHHHHcHH-HHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 394 IAGAWAALMSLGQE-GYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 394 ia~~~aal~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+++.++++.+... ++++..++..++++++.+.|+++ ++++
T Consensus 263 ~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 304 (386)
T 2dr1_A 263 VFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDI 304 (386)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence 55677777766555 68899999999999999999887 6553
No 28
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.93 E-value=7.3e-26 Score=224.79 Aligned_cols=243 Identities=12% Similarity=0.092 Sum_probs=188.1
Q ss_pred chhHHHHHHHHHHHHHHHhCCCC--CCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc--HHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKE--KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--YDK 241 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~--~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s--~~~ 241 (438)
.+...++..++++++++++|.+. ++ + ++|+|||+|+. ++.++. ++| ++|+++.+.|++ +..
T Consensus 30 ~~~~~~~~~~~~~~la~~~~~~~~~~~----v--~~~~g~t~al~-~~~~~~-----~~g---d~vi~~~~~~~~~~~~~ 94 (384)
T 3zrp_A 30 SKEFVEALAYSLKGLRYVMGASKNYQP----L--IIPGGGTSAME-SVTSLL-----KPN---DKILVVSNGVFGDRWEQ 94 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTTSEE----E--EEESCHHHHHH-HGGGGC-----CTT---CEEEEECSSHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCCcE----E--EEcCCcHHHHH-HHHhhc-----CCC---CEEEEecCCcchHHHHH
Confidence 45567788899999999999987 43 5 89999999999 887764 366 899999999966 667
Q ss_pred HHhhcCcEEEEeeCCCCCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhh
Q 013675 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (438)
Q Consensus 242 a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~ 320 (438)
.++..|++++.+|+++++.+|++++++++++ ++++|++++++||+|.+.|+++|.++|++||+++|+|++++.+..
T Consensus 95 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~--- 171 (384)
T 3zrp_A 95 IFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAE--- 171 (384)
T ss_dssp HHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTS---
T ss_pred HHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCc---
Confidence 7788999999999998899999999999998 899999999999999999999999999999999999999864332
Q ss_pred hhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEeccccccc-chhcccccCCCc--cC---------CCCccCC
Q 013675 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKH-QFVAVTEWSGGL--YV---------SPTVAGS 388 (438)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~-~~~~~~~~~g~~--~~---------~~~~~gs 388 (438)
+++....++|++++++||++++|.|+|+++.+++..... .......|.... +. .....|+
T Consensus 172 --------~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 243 (384)
T 3zrp_A 172 --------EVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFAT 243 (384)
T ss_dssp --------CCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSC
T ss_pred --------cccccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCC
Confidence 244455678999999999988899999988875532221 000000000000 00 0011123
Q ss_pred CCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 389 r~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+...++++.+++..+...++++..++..++++++.+.|+++ ++++
T Consensus 244 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 289 (384)
T 3zrp_A 244 PPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEI 289 (384)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeE
Confidence 333446677788887777789999999999999999999987 6654
No 29
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.93 E-value=6e-25 Score=219.37 Aligned_cols=243 Identities=13% Similarity=0.111 Sum_probs=184.5
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCC-CCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcH--HHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKEK-ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY--DKA 242 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~~-~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~--~~a 242 (438)
.+...+...++++++++++|.+++ + + ++|+|||+|+.++++++. .+| ++|+++.++|++. .+.
T Consensus 47 ~~~~~~~~~~l~~~la~~~g~~~~~~----i--~~~~g~t~a~~~~~~~~~-----~~g---d~vl~~~~~~~~~~~~~~ 112 (393)
T 2huf_A 47 HPETLKIMDDIKEGVRYLFQTNNIAT----F--CLSASGHGGMEATLCNLL-----EDG---DVILIGHTGHWGDRSADM 112 (393)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCCSEE----E--EESSCHHHHHHHHHHHHC-----CTT---CEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCcE----E--EEcCcHHHHHHHHHHHHh-----CCC---CEEEEECCCcchHHHHHH
Confidence 344567788899999999999764 3 4 899999999999999874 266 8999999999883 445
Q ss_pred HhhcCcEEEEeeCCCCCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhh
Q 013675 243 AQYFNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 243 ~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~ 321 (438)
++..|++++.+|+++++.+|++++++++++ +|++|++++++||||.+.|+++|.++|+++|+++|+|++++.+..
T Consensus 113 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~---- 188 (393)
T 2huf_A 113 ATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGA---- 188 (393)
T ss_dssp HHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTB----
T ss_pred HHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCC----
Confidence 667899999999988889999999999988 899999999999999999999999999999999999999753222
Q ss_pred hcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhc---ccccC----------CCccCCCCccCC
Q 013675 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVA---VTEWS----------GGLYVSPTVAGS 388 (438)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~---~~~~~----------g~~~~~~~~~gs 388 (438)
+++....++|+++.++||++++|.|.|+++.++ ++.+..... ...|. ++........|+
T Consensus 189 -------~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (393)
T 2huf_A 189 -------PMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSH-RAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHT 260 (393)
T ss_dssp -------CCCTTTTTCSEEECCSSSTTCCCSSCEEEEECH-HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCC
T ss_pred -------CcchhhcCccEEEECCCcccccCCCeEEEEECH-HHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCC
Confidence 233444578999999999988899999988864 333221111 01111 110001111233
Q ss_pred CCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 389 r~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+...++++.++++.+...++++..++..++++++.+.|+++ |+++
T Consensus 261 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 306 (393)
T 2huf_A 261 ISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA-GFEL 306 (393)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence 333345566667776655678889999999999999999887 6543
No 30
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.93 E-value=2.1e-25 Score=228.59 Aligned_cols=239 Identities=15% Similarity=0.127 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc----HHHHHh
Q 013675 169 VARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDKAAQ 244 (438)
Q Consensus 169 ~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s----~~~a~~ 244 (438)
...+.+++++++++++|+++++ + ++|+|+|+++.++++++.. +|-.+++|+++.++|++ +...++
T Consensus 109 ~~~~~~~l~~~la~~~g~~~~~----v--~~t~g~t~al~~~~~~~~~-----~~~~~~~Vl~~~~~~~s~~~~~~~~~~ 177 (465)
T 3e9k_A 109 WITGDESIVGLMKDIVGANEKE----I--ALMNALTVNLHLLMLSFFK-----PTPKRYKILLEAKAFPSDHYAIESQLQ 177 (465)
T ss_dssp GGGTTHHHHGGGHHHHTCCGGG----E--EECSCHHHHHHHHHHHHCC-----CCSSSCEEEEETTCCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHcCCCcCC----E--EEECCHHHHHHHHHHHhcc-----ccCCCCEEEEcCCcCCchHHHHHHHHH
Confidence 3445667889999999998765 6 9999999999999998752 45334779999999988 455777
Q ss_pred hcCcEE-----EEeeCCCCCccCHHHHHHhhc---cCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchh
Q 013675 245 YFNIKL-----WRVPVDKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFV 316 (438)
Q Consensus 245 ~~Gi~v-----~~v~~~~~~~~d~~~Le~~I~---~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~ 316 (438)
..|+++ ..+|.+.++.+|+++++++|+ ++|++|++++++||||.+.|+++|.++|+++|+++|+|++++.+.
T Consensus 178 ~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~ 257 (465)
T 3e9k_A 178 LHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGN 257 (465)
T ss_dssp HTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred HcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCC
Confidence 789864 445666788999999999997 679999999999999999999999999999999999999987544
Q ss_pred hhhhhhcCCCCCCCccCCCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCcc---------CC--C-
Q 013675 317 LPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLY---------VS--P- 383 (438)
Q Consensus 317 ~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~---------~~--~- 383 (438)
. +++....++|++++++||+++ +|.|+|+++++++. ..........|.++.. .. .
T Consensus 258 ~-----------~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 325 (465)
T 3e9k_A 258 V-----------ELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKH-AHTIKPALVGWFGHELSTRFKMDNKLQLIPG 325 (465)
T ss_dssp S-----------CCCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGGG-TTTSCCSSCCGGGBCHHHHTTCCSCCCBCSS
T ss_pred c-----------CCchhhcCCCEEEECcccccccCCCceEEEEEcHHH-HhhcCCcccCccCCCCCcccccCCCcCcCCC
Confidence 3 355556689999999999975 77788998886543 2221111223333210 00 0
Q ss_pred ---CccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 384 ---TVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 384 ---~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
...|+.+...++++.+++..+...|++++.++..++++++.+.|+++
T Consensus 326 ~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 3e9k_A 326 VCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHN 375 (465)
T ss_dssp GGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 11234444557888999988887889999999999999999999885
No 31
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.93 E-value=7.7e-26 Score=221.81 Aligned_cols=240 Identities=17% Similarity=0.160 Sum_probs=183.2
Q ss_pred chhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcH--HH
Q 013675 166 FQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY--DK 241 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~--~~ 241 (438)
.+...+...++++++++++|.+ +++ + ++|+|||+|+.++++++. + ++|+++.+.|+++ .+
T Consensus 28 ~~~~~~~~~~l~~~la~~~g~~~~~~~----v--~~t~g~t~a~~~~~~~~~------~----d~vl~~~~~~~~~~~~~ 91 (353)
T 2yrr_A 28 DPEVLRVNRAIQERLAALFDPGEGALV----A--ALAGSGSLGMEAGLANLD------R----GPVLVLVNGAFSQRVAE 91 (353)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCTTCEE----E--EESSCHHHHHHHHHHTCS------C----CCEEEEECSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCce----E--EEcCCcHHHHHHHHHHhc------C----CcEEEEcCCCchHHHHH
Confidence 4556677889999999999996 333 4 899999999999998764 1 5799999999884 56
Q ss_pred HHhhcCcEEEEeeCCCCCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhh
Q 013675 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (438)
Q Consensus 242 a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~ 320 (438)
+++..|++++.+|+++++.+|++++++++++ ++++|++++++||||.+.|+++|.++|++||+++|+|++|+.+..
T Consensus 92 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~--- 168 (353)
T 2yrr_A 92 MAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGML--- 168 (353)
T ss_dssp HHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTS---
T ss_pred HHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccc---
Confidence 7788899999999998889999999999998 899999999999999999999999999999999999999853222
Q ss_pred hhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCC------CccCCCCccCCCCCchH
Q 013675 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG------GLYVSPTVAGSRPGGLI 394 (438)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g------~~~~~~~~~gsr~~~~i 394 (438)
+++....++|++++++||++++|.|+|+++.+++...... ....|.. +........++.+...+
T Consensus 169 --------~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T 2yrr_A 169 --------PFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEARKAFT--GKRGWYLDLARVAEHWERGGYHHTTPVLLH 238 (353)
T ss_dssp --------CCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHHHHHHCC--CCSCSTTCHHHHHHHHTTCCCSSCCCHHHH
T ss_pred --------cccccccCceEEEecCcccccCCCceEEEEECHHHHHHhc--cCCCccccHHHHhhhhhcCCCCCCCCHHHH
Confidence 2233334679999999999889999999888765332111 0010100 00001112233333345
Q ss_pred HHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 395 AGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 395 a~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+++.+++..+...|+++..++..++++++.+.|+++ |+++
T Consensus 239 ~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 278 (353)
T 2yrr_A 239 YALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRP 278 (353)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence 566778877767778999999999999999999887 6553
No 32
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.93 E-value=2.5e-25 Score=222.32 Aligned_cols=242 Identities=16% Similarity=0.135 Sum_probs=188.4
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCC-CCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc--HHHHH
Q 013675 167 QSVARFEAEVIAMTAALLGNKEK-ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--YDKAA 243 (438)
Q Consensus 167 ~~~~~~e~~~~~~~a~l~g~~~~-~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s--~~~a~ 243 (438)
+...++.+++++++++++|.+++ + + ++|+|||+|+.++++++. .+| ++|+++.++|++ +..++
T Consensus 63 ~~~~~~~~~~~~~la~~~g~~~~~~----v--~~t~g~t~al~~~~~~~~-----~~g---d~Vl~~~~~~~~~~~~~~~ 128 (393)
T 1vjo_A 63 PAFLALMDEIQSLLRYVWQTENPLT----I--AVSGTGTAAMEATIANAV-----EPG---DVVLIGVAGYFGNRLVDMA 128 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCSCE----E--EESSCHHHHHHHHHHHHC-----CTT---CEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcE----E--EEeCchHHHHHHHHHhcc-----CCC---CEEEEEcCChhHHHHHHHH
Confidence 34667888999999999999766 5 5 899999999999999985 366 899999999999 99999
Q ss_pred hhcCcEEEEeeCCCCCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhh
Q 013675 244 QYFNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (438)
Q Consensus 244 ~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~ 322 (438)
+..|++++.+|+++++.+|+++|++++++ ++++|++++++||+|.+.|+++|.++|+++|+++++|++|+.+..
T Consensus 129 ~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~----- 203 (393)
T 1vjo_A 129 GRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGV----- 203 (393)
T ss_dssp HHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTS-----
T ss_pred HHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCc-----
Confidence 99999999999998889999999999998 899999999999999999999999999999999999999872211
Q ss_pred cCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhc---ccccCCCc-----c-CCCCcc-CCCCCc
Q 013675 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVA---VTEWSGGL-----Y-VSPTVA-GSRPGG 392 (438)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~---~~~~~g~~-----~-~~~~~~-gsr~~~ 392 (438)
+++....++|+++.++||++++|.|+|+++.+++. .+..... ...|..+. + ...... |+.+..
T Consensus 204 ------~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 276 (393)
T 1vjo_A 204 ------PIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRA-IEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPIN 276 (393)
T ss_dssp ------CCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHH-HHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHH
T ss_pred ------CCcccccCccEEEEcCcccccCCCceEEEEECHHH-HHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHH
Confidence 24444567899999999998888899998887542 2211000 00110000 0 000111 133333
Q ss_pred hHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 393 LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 393 ~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
..+++.++++.+..+++++..++..++++++.+.|+++ ++++
T Consensus 277 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 318 (393)
T 1vjo_A 277 LYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSL 318 (393)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCcc
Confidence 45567777877656678899999999999999999887 6554
No 33
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.93 E-value=7.7e-25 Score=218.07 Aligned_cols=244 Identities=13% Similarity=0.112 Sum_probs=188.3
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcC--cHHHHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS--AYDKAA 243 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~--s~~~a~ 243 (438)
.+...+...++++++++++|.+... ..++|+|||+|+.++++++. ++| ++|+++...|+ .+...+
T Consensus 51 ~~~~~~~~~~l~~~la~~~~~~~~~-----~v~~~~gg~~al~~~~~~~~-----~~g---d~vl~~~~~~~~~~~~~~~ 117 (393)
T 3kgw_A 51 QKEMLQIMEEIKQGIQYVFQTRNPL-----TLVVSGSGHCAMETALFNLL-----EPG---DSFLTGTNGIWGMRAAEIA 117 (393)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCCSE-----EEEESCCTTTHHHHHHHHHC-----CTT---CEEEEEESSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCc-----EEEEeCCcHHHHHHHHHhcC-----CCC---CEEEEEeCCchhHHHHHHH
Confidence 3555677888999999999997653 23899999999999999875 367 89999988875 347788
Q ss_pred hhcCcEEEEeeCCCCCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhh
Q 013675 244 QYFNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (438)
Q Consensus 244 ~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~ 322 (438)
+..|++++.+|+++++.+|+++|++++++ +|++|++++++||+|.+.|+++|.++|++||+++++|++++.+..
T Consensus 118 ~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~----- 192 (393)
T 3kgw_A 118 DRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGV----- 192 (393)
T ss_dssp HHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTS-----
T ss_pred HHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCc-----
Confidence 88999999999988889999999999998 899999999999999999999999999999999999999863322
Q ss_pred cCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhccccc-------------CCCccCCCCccCCC
Q 013675 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEW-------------SGGLYVSPTVAGSR 389 (438)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~-------------~g~~~~~~~~~gsr 389 (438)
+++....++|+++.++||++++|.|+|+++.+++.. +........| .++........++.
T Consensus 193 ------~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (393)
T 3kgw_A 193 ------PIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAK-YKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTT 265 (393)
T ss_dssp ------CCCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHH-HHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCC
T ss_pred ------ccchhhcCCCEEEecCcccccCCCceeEEEECHHHH-HHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCC
Confidence 344455678999999999988999999988865432 2111111111 11111111122333
Q ss_pred CCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 390 PGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 390 ~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+...++++.+++..+..+++++..++..++++++.+.|+++ ++++
T Consensus 266 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 310 (393)
T 3kgw_A 266 PVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKF 310 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred CHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence 33445667777777777788999999999999999999987 6654
No 34
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.93 E-value=1.2e-24 Score=218.90 Aligned_cols=243 Identities=21% Similarity=0.170 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHHHHhCC-CCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc----HHHHHh
Q 013675 170 ARFEAEVIAMTAALLGN-KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA----YDKAAQ 244 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~-~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s----~~~a~~ 244 (438)
.+...++++.+++++|. ++++ + ++|+|||+|+.+++++++.. ...+| ++|+++.++|++ +...++
T Consensus 71 ~~~~~~l~~~la~~~~~~~~~~----v--~~~~g~t~a~~~~~~~~~~~-~~~~g---d~Vl~~~~~~~~~~~~~~~~~~ 140 (420)
T 1t3i_A 71 TDAYEAVRNKVAKFINARSPRE----I--VYTRNATEAINLVAYSWGMN-NLKAG---DEIITTVMEHHSNLVPWQMVAA 140 (420)
T ss_dssp HHHHHHHHHHHHHHTTCSCGGG----E--EEESSHHHHHHHHHHHTHHH-HCCTT---CEEEEETTCCGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCe----E--EEcCChHHHHHHHHHHhhhc-ccCCC---CEEEECcchhHHHHHHHHHHHH
Confidence 45667788899999998 5443 5 89999999999999998421 11356 899999999999 667788
Q ss_pred hcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcC
Q 013675 245 YFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLG 324 (438)
Q Consensus 245 ~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g 324 (438)
..|++++.+|+++++.+|++++++++++++++|++++++||+|.+.|+++|.++|++||+++|+|++++.+..+
T Consensus 141 ~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~------ 214 (420)
T 1t3i_A 141 KTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYP------ 214 (420)
T ss_dssp HHCCEEEEECBCTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSC------
T ss_pred hcCcEEEEeccCCCCCcCHHHHHHhhCCCceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCcc------
Confidence 88999999999888999999999999999999999999999999999999999999999999999998744321
Q ss_pred CCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCC--------ccC--CC-CccCCCCCch
Q 013675 325 YPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGG--------LYV--SP-TVAGSRPGGL 393 (438)
Q Consensus 325 ~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~--------~~~--~~-~~~gsr~~~~ 393 (438)
++....++|+++.++||. ++|.|+|+++.++ ++.+........|... .+. .. ...|+.+...
T Consensus 215 -----~~~~~~~~di~~~s~sK~-~~~~g~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (420)
T 1t3i_A 215 -----LDVQLIDCDWLVASGHKM-CAPTGIGFLYGKE-EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAE 287 (420)
T ss_dssp -----CCHHHHTCSEEEEEGGGT-TSCTTCEEEEECH-HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHH
T ss_pred -----CchhhcCCCEEEEehhhh-cCCCceEEEEEch-HHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHH
Confidence 233334689999999995 7888999888764 3332211111111100 000 00 0113333334
Q ss_pred HHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 394 IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 394 ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+++.++++.+...++++..++..++++++.+.|+++|++++
T Consensus 288 ~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 329 (420)
T 1t3i_A 288 AIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRL 329 (420)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 455555777776667889999999999999999999888764
No 35
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.93 E-value=2.4e-24 Score=215.40 Aligned_cols=244 Identities=18% Similarity=0.151 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHHHHHhCC-CCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHH----HHH
Q 013675 169 VARFEAEVIAMTAALLGN-KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD----KAA 243 (438)
Q Consensus 169 ~~~~e~~~~~~~a~l~g~-~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~----~a~ 243 (438)
..+...++++.+++++|. ++++ + ++|+|+|+|+.+++++++.. ..++| ++|+++.++|++.. ..+
T Consensus 65 ~~~~~~~l~~~la~~~~~~~~~~----v--~~~~g~t~a~~~~~~~~~~~-~~~~g---d~vl~~~~~~~~~~~~~~~~~ 134 (406)
T 1kmj_A 65 ATEKMENVRKRASLFINARSAEE----L--VFVRGTTEGINLVANSWGNS-NVRAG---DNIIISQMEHHANIVPWQMLC 134 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCSCGGG----E--EEESSHHHHHHHHHHHTHHH-HCCTT---CEEEEETTCCGGGTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCCe----E--EEeCChhHHHHHHHHHhhhh-cCCCC---CEEEEecccchHHHHHHHHHH
Confidence 455677888999999998 4444 5 89999999999999998521 11356 89999999987743 456
Q ss_pred hhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhc
Q 013675 244 QYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (438)
Q Consensus 244 ~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~ 323 (438)
+..|++++.+|+++++.+|+++|+++++++|++|++++++||+|.+.|+++|.++|++||+++++|++++.+..|
T Consensus 135 ~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~----- 209 (406)
T 1kmj_A 135 ARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHP----- 209 (406)
T ss_dssp HHHTCEEEEECBCTTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSC-----
T ss_pred HhCCCEEEEEecCCCCCcCHHHHHHHhccCCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCC-----
Confidence 778999999999888999999999999999999999999999999999999999999999999999998754332
Q ss_pred CCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCc---------cCC---CCccCCCCC
Q 013675 324 GYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGL---------YVS---PTVAGSRPG 391 (438)
Q Consensus 324 g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~---------~~~---~~~~gsr~~ 391 (438)
++....++|+++.++||. ++|.|+|+++.++ ++.+........|.... +.. ....|+.+.
T Consensus 210 ------~~~~~~~~d~~~~s~~K~-~g~~G~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (406)
T 1kmj_A 210 ------VDVQALDCDFYVFSGHKL-YGPTGIGILYVKE-ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNT 281 (406)
T ss_dssp ------CCHHHHTCSEEEEEGGGT-TSCTTCEEEEECH-HHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCH
T ss_pred ------CcccccCCCEEEEEchhc-cCCCCcEEEEEeH-HHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCH
Confidence 233334689999999997 5898999988864 33322111111110000 000 001223333
Q ss_pred chHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 392 GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 392 ~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
..++++.++++.+...++++..++..++++++.+.|+++|++++
T Consensus 282 ~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 325 (406)
T 1kmj_A 282 GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTL 325 (406)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 34445556777666667888999999999999999999888764
No 36
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.92 E-value=9.1e-25 Score=215.11 Aligned_cols=241 Identities=13% Similarity=0.036 Sum_probs=181.0
Q ss_pred cchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc--HHHH
Q 013675 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--YDKA 242 (438)
Q Consensus 165 ~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s--~~~a 242 (438)
..+...++.+++++++++++|.+..+ ++ ++|+|||+|+.++++++.. +++++....|++ +...
T Consensus 37 ~~~~~~~~~~~~~~~la~~~g~~~~~---~v--~~~~g~t~al~~~~~~l~~----------~~~i~~~~~~~~~~~~~~ 101 (362)
T 3ffr_A 37 RSKKFEEVYKTASDNLKTLLELPSNY---EV--LFLASATEIWERIIQNCVE----------KKSFHCVNGSFSKRFYEF 101 (362)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTCCTTE---EE--EEESCHHHHHHHHHHHHCS----------SEEEEEECSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCc---EE--EEeCCchHHHHHHHHhccC----------CcEEEEcCcHHHHHHHHH
Confidence 46677788899999999999996433 14 8999999999999998752 356666665555 4457
Q ss_pred HhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHc-CCeEEEeccccchhhhhhh
Q 013675 243 AQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH-GTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 243 ~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~-~i~lhVD~a~gg~~~pf~~ 321 (438)
++..|++++.+|.++++.+|+++++ ++++|++|++++|+||+|.+.|+++|+++|++| |+++|+|++++.+..
T Consensus 102 ~~~~g~~~~~v~~~~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~---- 175 (362)
T 3ffr_A 102 AGELGREAYKEEAAFGKGFYPADIT--VPADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYP---- 175 (362)
T ss_dssp HHHTTCEEEEEECCTTCCCCGGGCC--CCTTCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSS----
T ss_pred HHHhCCCeEEEecCCCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCc----
Confidence 7788999999999888999999999 788999999999999999999999999999999 999999999864332
Q ss_pred hcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhccccc-CCCccC----------CCCccCCCC
Q 013675 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEW-SGGLYV----------SPTVAGSRP 390 (438)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~-~g~~~~----------~~~~~gsr~ 390 (438)
+.+.. .+|+++.++||++.+|.|+|+++.+++ +.+........+ ....+. .....++.+
T Consensus 176 -------~~~~~--~~d~~~~s~~K~~~~~~G~g~~~~~~~-~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (362)
T 3ffr_A 176 -------KFDWT--KIDSVFFSVQKCFGLPAGLGVWILNDR-VIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPN 245 (362)
T ss_dssp -------CCCTT--SCSEEEEETTSTTCCCSCCEEEEEEHH-HHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCC
T ss_pred -------ccChh--HCcEEEEecccccCCCCceEEEEECHH-HHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCch
Confidence 22222 289999999999777999999777654 322211111100 000000 011123333
Q ss_pred CchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 013675 391 GGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLPP 436 (438)
Q Consensus 391 ~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 436 (438)
...++++.++++.+..+|++++.++..++++++.+.|+++||+++.
T Consensus 246 ~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 291 (362)
T 3ffr_A 246 AMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFG 291 (362)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEES
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceec
Confidence 3445677778877777788999999999999999999999888753
No 37
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=1.9e-24 Score=216.81 Aligned_cols=242 Identities=15% Similarity=0.112 Sum_probs=177.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhh--
Q 013675 168 SVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY-- 245 (438)
Q Consensus 168 ~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~-- 245 (438)
...+...++++++++++|.++++ + ++|+|+|+++.++++++... ..+| ++|+++.++|++....+..
T Consensus 66 ~~~~~~~~l~~~la~~~g~~~~~----v--~~~~g~t~al~~~~~~l~~~--~~~g---d~vi~~~~~~~~~~~~~~~~~ 134 (406)
T 3cai_A 66 RSAAVLDAAREAVADLVNADPGG----V--VLGADRAVLLSLLAEASSSR--AGLG---YEVIVSRLDDEANIAPWLRAA 134 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG----E--EEESCHHHHHHHHHHHTGGG--GBTT---CEEEEETTSCGGGTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCe----E--EEeCChHHHHHHHHHHHhhc--cCCC---CEEEEcCCccHHHHHHHHHHH
Confidence 34567788999999999997654 5 89999999999988876210 1356 8999999999987665554
Q ss_pred --cCcEEEEeeCC-CCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhh
Q 013675 246 --FNIKLWRVPVD-KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (438)
Q Consensus 246 --~Gi~v~~v~~~-~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~ 322 (438)
.|++++.+|++ +++.+|+++|+++++++|++|++++++||||.+.|+++|.++|+++|+++|+|++++.+..
T Consensus 135 ~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~----- 209 (406)
T 3cai_A 135 HRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYR----- 209 (406)
T ss_dssp HHHBCEEEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTC-----
T ss_pred HhcCCeEEEEecCcccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCC-----
Confidence 69999999998 6889999999999999999999999999999999999999999999999999999864322
Q ss_pred cCCCCCCCccCCCCccEEEeCCCCCCCCCCCcE-EEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHH
Q 013675 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTS-VVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAAL 401 (438)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g-~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal 401 (438)
+++....++|+++.++||+ ++|. +| +++.++ ++..........|.++ .......|+.+...++++.+++
T Consensus 210 ------~~~~~~~~~d~~~~s~~K~-~g~~-~G~~~~~~~-~~~~~l~~~~~~~~~~-~~~~~~~~t~~~~~~~a~~~al 279 (406)
T 3cai_A 210 ------LLDIRETDADVVTVNAHAW-GGPP-IGAMVFRDP-SVMNSFGSVSTNPYAT-GPARLEIGVHQFGLLAGVVASI 279 (406)
T ss_dssp ------CCCHHHHCCSEEEEEGGGG-TSCS-CEEEEESCH-HHHHTSCCCCSCTTCC-GGGGGCCSCCCHHHHHHHHHHH
T ss_pred ------CCCchhcCCCEEEeehhhh-cCCC-cCeEEEEeh-HHHhhcCCcccCCCCC-ccccccCCCccHHHHHHHHHHH
Confidence 2333334689999999998 5775 78 777664 3322111111111111 0000112333333344555666
Q ss_pred HHHcHH--------------HHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 402 MSLGQE--------------GYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 402 ~~~g~~--------------g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
..+... ++++..++..++++++.+.|+++|++++
T Consensus 280 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 327 (406)
T 3cai_A 280 EYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVML 327 (406)
T ss_dssp HHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 554321 4788889999999999999999888764
No 38
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.92 E-value=3.4e-24 Score=217.02 Aligned_cols=246 Identities=20% Similarity=0.181 Sum_probs=178.9
Q ss_pred cchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHH---hcCC----------CCCeEEe
Q 013675 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRN---KRGI----------TRPEMII 231 (438)
Q Consensus 165 ~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~---~~G~----------~~~~Viv 231 (438)
..+...+...++++++++++|.++++ + ++|+|+|+|+.++++++...... .+|- ..++|++
T Consensus 55 ~~~~~~~~~~~l~~~la~~~g~~~~~----v--~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~ 128 (432)
T 3a9z_A 55 AGRKAKDIINTARASLAKMIGGKPQD----I--IFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFIT 128 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGG----E--EEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCe----E--EEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEE
Confidence 34456778889999999999997655 5 99999999999999998531111 2440 0146777
Q ss_pred cCCCcCcHHHHH----hhcCcEEEEeeCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcC---
Q 013675 232 PVSAHSAYDKAA----QYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHG--- 303 (438)
Q Consensus 232 ~~~~h~s~~~a~----~~~Gi~v~~v~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~--- 303 (438)
+..+|++...++ +..|++++.+|+++ ++.+|+++|+++++++|++|++++++||||.+.|+++|.++|+++|
T Consensus 129 ~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~ 208 (432)
T 3a9z_A 129 CTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIR 208 (432)
T ss_dssp ETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHH
T ss_pred ecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCCceEEEEECcccCcccccCHHHHHHHHHhcCccc
Confidence 788888875544 34699999999986 8889999999999999999999999999999999999999999999
Q ss_pred -------CeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccC
Q 013675 304 -------TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWS 376 (438)
Q Consensus 304 -------i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~ 376 (438)
+++|+|++|+.+.. +++....++|+++.++||+ ++|. +|+++++++..... ..+.+.
T Consensus 209 ~~~~~~~~~livDea~~~~~~-----------~~~~~~~~~d~~~~s~~K~-~g~~-~G~~~~~~~~~~~~---~~~~~~ 272 (432)
T 3a9z_A 209 AASGLPRVLVHTDAAQALGKR-----------RVDVEDLGVDFLTIVGHKF-YGPR-IGALYVRGVGKLTP---LYPMLF 272 (432)
T ss_dssp HHHTCCCCEEEEECTTTTTTS-----------CCCHHHHCCSEEEEEGGGT-TCCS-CEEEEETTBTTTBC---CCCSCC
T ss_pred ccccCCceEEEEEchhhhCCc-----------ccChhhcCCCEEEEehhHh-cCCc-ceEEEEccccccCC---cCceee
Confidence 99999999964432 2333334689999999998 5776 99988876531111 111111
Q ss_pred CCccCCCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 013675 377 GGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMF 433 (438)
Q Consensus 377 g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~ 433 (438)
++........|+.+...++++.++++.+ .+++++..++..++++++.+.|++++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 328 (432)
T 3a9z_A 273 GGGQERNFRPGTENTPMIAGLGKAADLV-SENCETYEAHMRDIRDYLEERLEAEFGK 328 (432)
T ss_dssp SSCGGGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred cCCccccccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 2111111122333333345566667654 4578899999999999999999886554
No 39
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.92 E-value=3.4e-24 Score=214.14 Aligned_cols=242 Identities=13% Similarity=0.153 Sum_probs=185.2
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCC-CCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHH--HH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKEK-ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD--KA 242 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~~-~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~--~a 242 (438)
.+.......++++.+++++|.+++ + + ++|+|||+|+.++++++. .+| ++|+++.++|+++. +.
T Consensus 46 ~~~~~~~~~~l~~~la~~~~~~~~~~----v--~~~~g~t~al~~~~~~~~-----~~g---d~vl~~~~~~~~~~~~~~ 111 (396)
T 2ch1_A 46 HAELFRTMDEVKDGLRYIFQTENRAT----M--CVSGSAHAGMEAMLSNLL-----EEG---DRVLIAVNGIWAERAVEM 111 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCSCE----E--EESSCHHHHHHHHHHHHC-----CTT---CEEEEEESSHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHhCCCCCcE----E--EECCcHHHHHHHHHHHhc-----CCC---CeEEEEcCCcccHHHHHH
Confidence 444456677899999999999876 4 5 899999999999999875 366 89999999999974 57
Q ss_pred HhhcCcEEEEeeCCCCCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhh
Q 013675 243 AQYFNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 243 ~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~ 321 (438)
++..|++++.+|+++++.+|++++++++++ ++++|++++|+||||.+.|+++|.++|+++|+++++|++|+.+..
T Consensus 112 ~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~---- 187 (396)
T 2ch1_A 112 SERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGV---- 187 (396)
T ss_dssp HHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTB----
T ss_pred HHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCC----
Confidence 888999999999988889999999999988 899999999999999999999999999999999999999873222
Q ss_pred hcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhc---ccc-----------cCCCccCCCCccC
Q 013675 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVA---VTE-----------WSGGLYVSPTVAG 387 (438)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~---~~~-----------~~g~~~~~~~~~g 387 (438)
+++....++|+++.++||++++|.|+|+++++++ ........ ... |... .......+
T Consensus 188 -------~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 258 (396)
T 2ch1_A 188 -------PFYMDKWEIDAVYTGAQKVLGAPPGITPISISPK-ALDVIRNRRTKSKVFYWDLLLLGNYWGCY-DEPKRYHH 258 (396)
T ss_dssp -------CCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHH-HHHHHHTCSSCCSCGGGCHHHHHHHTTCS-SSCCCCCC
T ss_pred -------ccchhhcCcCEEEEcCCccccCCCCeEEEEECHH-HHHhhhhccCcccceEechHHHHHhhhhh-cccCCCCC
Confidence 2445556789999999999889999999888753 32211000 000 1100 00011223
Q ss_pred CCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 388 SRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 388 sr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+.+....+++.++++.+..+++++..++..++++++.+.|+++ |+++
T Consensus 259 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 305 (396)
T 2ch1_A 259 TVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDI 305 (396)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCB
T ss_pred CCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCee
Confidence 3333344566677777666788899999999999999999876 5543
No 40
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.92 E-value=1.9e-24 Score=212.12 Aligned_cols=237 Identities=12% Similarity=0.035 Sum_probs=178.5
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHH--HHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD--KAA 243 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~--~a~ 243 (438)
.+...+...++++++++++|.++++ + ++|+|||+|+.++++++. .+| ++|+++.++|+++. +.+
T Consensus 29 ~~~~~~~~~~l~~~la~~~g~~~~~----i--~~~~g~t~a~~~~~~~~~-----~~g---d~vl~~~~~~~~~~~~~~~ 94 (352)
T 1iug_A 29 TEAAREVFLKARGLLREAFRTEGEV----L--ILTGSGTLAMEALVKNLF-----APG---ERVLVPVYGKFSERFYEIA 94 (352)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSSEE----E--EEESCHHHHHHHHHHHHC-----CTT---CEEEEEECSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCce----E--EEcCchHHHHHHHHHhcc-----CCC---CeEEEEeCCchhHHHHHHH
Confidence 4555667788999999999998654 4 899999999999999875 266 89999999999964 555
Q ss_pred hhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHc--CCeEEEeccccchhhhhhh
Q 013675 244 QYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH--GTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 244 ~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~--~i~lhVD~a~gg~~~pf~~ 321 (438)
+..|++++.+|+++++.+|++++++ ++|++|++++++||||.+.|+++|.++|++| |+++|+|++++.+..
T Consensus 95 ~~~g~~~~~v~~~~~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~---- 167 (352)
T 1iug_A 95 LEAGLVVERLDYPYGDTPRPEDVAK---EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVG---- 167 (352)
T ss_dssp HHTTCEEEEEECCTTCCCCTTTSCC---SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTB----
T ss_pred HHcCCceEEEeCCCCCCCCHHHHhc---cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCc----
Confidence 6689999999998888899999987 6789999999999999999999999999999 999999999863322
Q ss_pred hcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCC------ccCCCCccCCCCCchHH
Q 013675 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGG------LYVSPTVAGSRPGGLIA 395 (438)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~------~~~~~~~~gsr~~~~ia 395 (438)
+++....++|+++.++||++++|.|+|+++++++...... . ..|... ........++.+...++
T Consensus 168 -------~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (352)
T 1iug_A 168 -------EVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLK-P--RGYYLDLARELKAQKEGESAWTPAINLVL 237 (352)
T ss_dssp -------CCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCC-C--CSSTTCHHHHHHHHTTTCCSSCCCHHHHH
T ss_pred -------ceeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhh-C--CCceeeHHHHHhhcccCCCCCCCCHHHHH
Confidence 2333334689999999998899999999888755332100 0 000000 00001112222333345
Q ss_pred HHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 396 GAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 396 ~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
++.+++..+... +++..++..++++++.+.|+++ |+++
T Consensus 238 a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~ 275 (352)
T 1iug_A 238 AVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GLRP 275 (352)
T ss_dssp HHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence 566777665444 7888999999999999999887 6653
No 41
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.92 E-value=1.5e-24 Score=215.54 Aligned_cols=247 Identities=14% Similarity=0.097 Sum_probs=177.4
Q ss_pred chhHHHHHHHHHHHHHHHhCCC----CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCC--cCcH
Q 013675 166 FQSVARFEAEVIAMTAALLGNK----EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSA--HSAY 239 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~----~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~--h~s~ 239 (438)
.|.......+++++++++++.. +++ + ++|+|||+|+.++++++... .++| ++|+++... |.++
T Consensus 33 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----v--~~~~g~t~al~~~~~~~~~~--~~~g---d~vlv~~~~~~~~~~ 101 (385)
T 2bkw_A 33 SPEFVSIFQRVLKNTRAVFKSAAASKSQP----F--VLAGSGTLGWDIFASNFILS--KAPN---KNVLVVSTGTFSDRF 101 (385)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCGGGTCEE----E--EEESCTTHHHHHHHHHHSCT--TCSC---CEEEEECSSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCCCce----E--EEcCchHHHHHHHHHHHhcc--CCCC---CeEEEEcCCcchHHH
Confidence 4444455666778888888764 233 5 89999999999999987410 0256 888777543 3334
Q ss_pred HHHHhhcCcEEEEeeC-CCCCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHc--CCeEEEeccccch
Q 013675 240 DKAAQYFNIKLWRVPV-DKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSH--GTCLHVDLCLGGF 315 (438)
Q Consensus 240 ~~a~~~~Gi~v~~v~~-~~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~--~i~lhVD~a~gg~ 315 (438)
.++++..|++++.+|+ ++++.+|+++|++++++ +|++|++++++||||.+.|+++|.++|+++ |+++|+|++++.+
T Consensus 102 ~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~ 181 (385)
T 2bkw_A 102 ADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIG 181 (385)
T ss_dssp HHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTT
T ss_pred HHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccC
Confidence 5778888999999999 88899999999999987 899999999999999999999999999999 9999999998643
Q ss_pred hhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEeccccc-ccch---hcccccCCCc---------cC-
Q 013675 316 VLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIR-KHQF---VAVTEWSGGL---------YV- 381 (438)
Q Consensus 316 ~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~-~~~~---~~~~~~~g~~---------~~- 381 (438)
.. +++....++|+++.++||++++|.|+|+++++++.+. .... .....|.+.. +.
T Consensus 182 ~~-----------~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (385)
T 2bkw_A 182 CE-----------EFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEA 250 (385)
T ss_dssp TS-----------CCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHT
T ss_pred Cc-----------cccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhc
Confidence 32 2334445789999999999888999999888765322 1100 0000111100 00
Q ss_pred -CCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHh-hcCCCccc
Q 013675 382 -SPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGL-VLFPMFLP 435 (438)
Q Consensus 382 -~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L-~~~~g~~~ 435 (438)
.....++.+...++++.++++.+...++++..++..++++++.+.| +++ ++++
T Consensus 251 ~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~ 305 (385)
T 2bkw_A 251 GKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL-QLTS 305 (385)
T ss_dssp TCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT-CCEE
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc-Ccee
Confidence 0000122222334566677776655678889999999999999999 877 6553
No 42
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.91 E-value=5.3e-24 Score=211.23 Aligned_cols=242 Identities=12% Similarity=0.080 Sum_probs=180.1
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHH--HHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD--KAA 243 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~--~a~ 243 (438)
.+...++.+++++++++++|.+.+. ++ .++|+|||+|+.++++++. ++| ++|+++.+.+++.. ..+
T Consensus 47 ~~~~~~~~~~~~~~la~~~g~~~~~---~~-i~~~~ggt~al~~~~~~~~-----~~g---d~vi~~~~~~~~~~~~~~~ 114 (376)
T 3f0h_A 47 TTEFSSTMLENEKFMLEYAKAPEGS---KA-VFMTCSSTGSMEAVVMNCF-----TKK---DKVLVIDGGSFGHRFVQLC 114 (376)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTTC---EE-EEESSCHHHHHHHHHHHHC-----CTT---CCEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCc---eE-EEEcCChhHHHHHHHHhcc-----CCC---CeEEEEeCChhhHHHHHHH
Confidence 4566678889999999999997542 02 2458999999999999876 367 89999987666533 457
Q ss_pred hhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhc
Q 013675 244 QYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (438)
Q Consensus 244 ~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~ 323 (438)
...|++++.+|++.++.+|+++++++++++|++|++++++||+|.+.|+++|+++|++||+++|+|++++.+..
T Consensus 115 ~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~------ 188 (376)
T 3f0h_A 115 EIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLAD------ 188 (376)
T ss_dssp HHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTS------
T ss_pred HHcCCceEEEeCCCCCCCCHHHHHHhhccCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCc------
Confidence 77899999999988899999999999999999999999999999999999999999999999999999875543
Q ss_pred CCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCC--cc----CCCCccCCCCCchHHHH
Q 013675 324 GYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGG--LY----VSPTVAGSRPGGLIAGA 397 (438)
Q Consensus 324 g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~--~~----~~~~~~gsr~~~~ia~~ 397 (438)
+++....|+|+++.++||++.+|.|+|+++.+++............+... .+ .......+.+...++++
T Consensus 189 -----~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 263 (376)
T 3f0h_A 189 -----PFNMNECGADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQI 263 (376)
T ss_dssp -----CCCHHHHTCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHH
T ss_pred -----cccccccCccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHH
Confidence 23444457899999999997779999997776543221110000000000 00 00000111122223667
Q ss_pred HHHHHHHcHH-HHHHHHHHHHHHHHHHHHHhhcC
Q 013675 398 WAALMSLGQE-GYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 398 ~aal~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
.+++..+... ++++..++..++++++.+.|+++
T Consensus 264 ~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (376)
T 3f0h_A 264 NERLKEIKKHGGADAEVARIASQAADFRAKIKDL 297 (376)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 7788777666 78999999999999999999886
No 43
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.91 E-value=6.5e-24 Score=210.00 Aligned_cols=231 Identities=13% Similarity=0.068 Sum_probs=174.7
Q ss_pred HHHHHHHHHH-HHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCc
Q 013675 170 ARFEAEVIAM-TAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNI 248 (438)
Q Consensus 170 ~~~e~~~~~~-~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi 248 (438)
.+...+++++ +++++|.+ + + ++|+|+|+|+.++++++. .+| ++|+++.++|+++..+++..|+
T Consensus 52 ~~~~~~l~~~~la~~~~~~--~----v--~~~~g~t~a~~~~~~~~~-----~~g---d~vl~~~~~~~~~~~~~~~~g~ 115 (371)
T 2e7j_A 52 TPPIHDFIHNQLPKFLGCD--V----A--RVTNGAREAKFAVMHSLA-----KKD---AWVVMDENCHYSSYVAAERAGL 115 (371)
T ss_dssp -CCHHHHHHTHHHHHTTSS--E----E--EEESSHHHHHHHHHHHHC-----CTT---CEEEEETTCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCCC--E----E--EEeCChHHHHHHHHHHHh-----CCC---CEEEEccCcchHHHHHHHHcCC
Confidence 3456677888 99999987 4 6 899999999999999985 266 8999999999999999999999
Q ss_pred EEEEee--CCCCCccCHHHHHHhhc-----cCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhh
Q 013675 249 KLWRVP--VDKEFRADVKAIKKYIN-----RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 249 ~v~~v~--~~~~~~~d~~~Le~~I~-----~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~ 321 (438)
+++.+| .++++.+|+++|+++++ +++++|++++++||+|.+.|+++|.++|++||+++|+|++++.+..|
T Consensus 116 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~--- 192 (371)
T 2e7j_A 116 NIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMP--- 192 (371)
T ss_dssp EEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBC---
T ss_pred eEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCC---
Confidence 999999 88789999999999998 78999999999999999999999999999999999999999875542
Q ss_pred hcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHH
Q 013675 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAAL 401 (438)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal 401 (438)
++....++|+++.++||++++|.++|+++.+++.......... .+.........++.+...++++.+++
T Consensus 193 --------~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~l 261 (371)
T 2e7j_A 193 --------VSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSE---KYKNKEVELLGCTARGATIITLMASF 261 (371)
T ss_dssp --------CCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCS---SCTTSBGGGTTCCCCSHHHHHHHHHH
T ss_pred --------CChhhcCCCEEEecCCcCCCCCCCcEEEEEechhhhhhccccc---cCcccccccccCCcCHHHHHHHHHHH
Confidence 2233345799999999987888899999887653221010000 01100000002233333344555666
Q ss_pred HHHcHHHHHHHHHHH--HHHHHHHHHHhhcCCCccc
Q 013675 402 MSLGQEGYLENTKAI--MEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 402 ~~~g~~g~~~~~~~~--~~~a~~l~~~L~~~~g~~~ 435 (438)
+.+.. +..++. .++++++.+.|+++ ++++
T Consensus 262 ~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~~~~ 292 (371)
T 2e7j_A 262 PHVRE----RIKRWDEEVEKARRFAAEMEKL-GIKQ 292 (371)
T ss_dssp HHHHH----HGGGHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred HHHHH----HHHHHHHHHHHHHHHHHHHHHc-CcEE
Confidence 55432 566777 88999999999877 6543
No 44
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.90 E-value=5.6e-23 Score=205.00 Aligned_cols=243 Identities=14% Similarity=0.121 Sum_probs=182.1
Q ss_pred ccchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcH--HH
Q 013675 164 DIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY--DK 241 (438)
Q Consensus 164 ~~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~--~~ 241 (438)
..++.+.++.+++++.+++++|.+ .. + ++|+|||+|+.+++..+ .+| ++|+++...|++. ..
T Consensus 28 h~~~~~~~~~~~~~~~l~~~~~~~-~~----v--~~~~sgt~a~~~~~~~~------~~g---d~vi~~~~~~~~~~~~~ 91 (379)
T 3ke3_A 28 HMSKAFQEVMNDLLSNLKTVYNAE-AA----V--IIPGSGTYGMEAVARQL------TID---EDCLIIRNGWFSYRWTQ 91 (379)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHTCS-EE----E--EEESCHHHHHHHHHHHH------CTT---CEEEEEECSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCC-CE----E--EEcCChhHHHHHHHHhC------CCC---CeEEEEeCCchhHHHHH
Confidence 346777889999999999999997 33 4 88999999999987543 256 8999999888763 35
Q ss_pred HHhhcCc--EEEEeeCCCC---------CccCHHHHHHhhc-cCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeE
Q 013675 242 AAQYFNI--KLWRVPVDKE---------FRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCL 306 (438)
Q Consensus 242 a~~~~Gi--~v~~v~~~~~---------~~~d~~~Le~~I~-~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~l 306 (438)
.++..|+ +++.++++.. +.+|+++++++++ ++|++|++++++|++|.+.| +++|+++|++||+++
T Consensus 92 ~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~l 171 (379)
T 3ke3_A 92 ILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLL 171 (379)
T ss_dssp HHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEE
Confidence 5666664 8888887532 2589999999996 48999999999999999999 999999999999999
Q ss_pred EEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCC--------
Q 013675 307 HVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGG-------- 378 (438)
Q Consensus 307 hVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~-------- 378 (438)
|+|++++ +.. +++....|+|++++++||++.+|.|+|+++.+++............+...
T Consensus 172 i~D~~~~-g~~-----------~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 239 (379)
T 3ke3_A 172 VIDCIAS-GCV-----------WLDMKELGIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIM 239 (379)
T ss_dssp EEECTTC-TTC-----------CCCHHHHTCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHH
T ss_pred EEEeccc-CCc-----------cccccccCCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHH
Confidence 9999976 322 35555568999999999998899999998887543221110000011000
Q ss_pred -cc--CCCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 379 -LY--VSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 379 -~~--~~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+ ......++.+...++++.+++..+..+|++++.++..++++++++.|+++ |+++
T Consensus 240 ~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~ 298 (379)
T 3ke3_A 240 RAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIES 298 (379)
T ss_dssp HHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred HhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEe
Confidence 00 00111234444556778888888878889999999999999999999887 5554
No 45
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.90 E-value=1.7e-22 Score=201.47 Aligned_cols=240 Identities=16% Similarity=0.158 Sum_probs=178.4
Q ss_pred CcccchhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcH
Q 013675 162 HLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY 239 (438)
Q Consensus 162 ~~~~~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~ 239 (438)
.|...++..++++++.+++.+.+|.+ +++ + ++|+|||+|+.++++++. .+| ++|+++.++|+++
T Consensus 62 ~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~----v--~~~~g~~~a~~~~~~~~~-----~~g---d~vl~~~~~~~~~ 127 (388)
T 1j32_A 62 RYGPAAGEPRLREAIAQKLQRDNGLCYGADN----I--LVTNGGKQSIFNLMLAMI-----EPG---DEVIIPAPFWVSY 127 (388)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCCGGG----E--EEESHHHHHHHHHHHHHC-----CTT---CEEEEESSCCTHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCChhh----E--EEcCCHHHHHHHHHHHhc-----CCC---CEEEEcCCCChhH
Confidence 34444567788999999999988864 333 5 899999999999999875 367 8999999999999
Q ss_pred HHHHhhcCcEEEEeeCCC--CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccc
Q 013675 240 DKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGG 314 (438)
Q Consensus 240 ~~a~~~~Gi~v~~v~~~~--~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg 314 (438)
..+++..|++++.+|+++ ++.+|+++|++++++++++|++++|+||||.+.| +++|+++|+++|+++|+|++|++
T Consensus 128 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 207 (388)
T 1j32_A 128 PEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEK 207 (388)
T ss_dssp HHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred HHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchh
Confidence 999999999999999985 6789999999999999999999999999999954 89999999999999999999987
Q ss_pred hhhhhhhhcCCCCCCC-ccC--CCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCC
Q 013675 315 FVLPFAKKLGYPIPPF-DFS--VQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSR 389 (438)
Q Consensus 315 ~~~pf~~~~g~~~p~~-~~~--~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr 389 (438)
+... |.+.+++ .+. ..+.|++..++||+ ++++| +|+++.+++ +.+........ ..
T Consensus 208 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~sK~-~~~~G~r~G~~~~~~~-~~~~l~~~~~~---~~---------- 267 (388)
T 1j32_A 208 ILYD-----DAQHLSIGAASPEAYERSVVCSGFAKT-YAMTGWRVGFLAGPVP-LVKAATKIQGH---ST---------- 267 (388)
T ss_dssp CBCT-----TCCCCCGGGSCHHHHHTEEEEEESTTT-TTCTTTCCEEEECCHH-HHHHHHHHHHT---TT----------
T ss_pred cccC-----CCCCCCHHHccccccCCEEEEeechhc-cCCcccceEEEEeCHH-HHHHHHHHHhh---cc----------
Confidence 6531 1101111 111 13578999999999 46666 899876543 32221111000 00
Q ss_pred CCchHHHHHHHHHHH--cHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 390 PGGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 390 ~~~~ia~~~aal~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+....+++++...+ +.+.+++..++..++++++.+.|+++|++++
T Consensus 268 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 315 (388)
T 1j32_A 268 SNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLEC 315 (388)
T ss_dssp CSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBC
T ss_pred cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcc
Confidence 000112333333333 4566788889999999999999999888764
No 46
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.90 E-value=5.6e-23 Score=202.41 Aligned_cols=239 Identities=18% Similarity=0.163 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHHHhCCCCC-CCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEec-CCCcCc-HHHHHhhcC
Q 013675 171 RFEAEVIAMTAALLGNKEK-ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIP-VSAHSA-YDKAAQYFN 247 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~-~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~-~~~h~s-~~~a~~~~G 247 (438)
....++++++++++|.+.+ + ++ ++|+|||+|+.+++++++. +| ++|+++ .+.|++ +..++...|
T Consensus 37 ~~~~~l~~~la~~~g~~~~~~---~v--~~~~g~t~a~~~~~~~~~~-----~g---d~vi~~~~~~~~~~~~~~~~~~g 103 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGYT---SV--LLQGSGSYAVEAVLGSALG-----PQ---DKVLIVSNGAYGARMVEMAGLMG 103 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSEE---EE--EEESCHHHHHHHHHHHSCC-----TT---CCEEEEESSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCcCc---EE--EEecChHHHHHHHHHHhcC-----CC---CeEEEEeCCCccHHHHHHHHHhC
Confidence 4566778889999994321 1 14 8999999999999999852 56 777665 477776 667888889
Q ss_pred cEEEEeeCCCCCccCHHHHHHhhcc--CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCC
Q 013675 248 IKLWRVPVDKEFRADVKAIKKYINR--NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGY 325 (438)
Q Consensus 248 i~v~~v~~~~~~~~d~~~Le~~I~~--~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~ 325 (438)
++++.+|+++++.+|+++|++++++ ++++|++++++||+|.+.|+++|.++|++||+++|+|++++.+..
T Consensus 104 ~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~-------- 175 (366)
T 1m32_A 104 IAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGI-------- 175 (366)
T ss_dssp CCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTS--------
T ss_pred CceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCc--------
Confidence 9999999988888999999999986 478999999999999999999999999999999999999874332
Q ss_pred CCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCC---cc----CC-CCccCCCCCchHHHH
Q 013675 326 PIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGG---LY----VS-PTVAGSRPGGLIAGA 397 (438)
Q Consensus 326 ~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~---~~----~~-~~~~gsr~~~~ia~~ 397 (438)
+++....++|+++.++||++++|.|+|+++.+++.. +........+... .+ .. ....++.+...++++
T Consensus 176 ---~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 251 (366)
T 1m32_A 176 ---PMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKL-AACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAF 251 (366)
T ss_dssp ---CCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHH-TTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHH
T ss_pred ---CccccccCccEEEecCcccccCCCceEEEEECHHHH-HhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHH
Confidence 233344568999999999988999999998876432 2111000000000 00 00 000122222334566
Q ss_pred HHHHHHHcHHH-HHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 398 WAALMSLGQEG-YLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 398 ~aal~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.++++.+...| +++..++..++++++.+.|+++ ++++
T Consensus 252 ~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~ 289 (366)
T 1m32_A 252 AQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNT 289 (366)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred HHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCee
Confidence 67777666666 8889999999999999999887 6543
No 47
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.90 E-value=1.3e-23 Score=208.85 Aligned_cols=241 Identities=15% Similarity=0.041 Sum_probs=183.9
Q ss_pred ccchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeE-cCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc--HH
Q 013675 164 DIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNM-TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--YD 240 (438)
Q Consensus 164 ~~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~-t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s--~~ 240 (438)
..++.+.++.+++++.+++++|++++. ++ +| |+|||+|+.+++..+.. .++| |++++....|.+ +.
T Consensus 51 hr~~~~~~~~~~ar~~la~ll~~~~~~---ev--if~t~~~T~a~n~a~~~l~~---~~~G---d~v~~~~~g~~~~~~~ 119 (377)
T 3e77_A 51 HRSSDFAKIINNTENLVRELLAVPDNY---KV--IFLQGGGCGQFSAVPLNLIG---LKAG---RCADYVVTGAWSAKAA 119 (377)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHTCCTTE---EE--EEESSHHHHHHHHHHHHHGG---GSTT---CEEEECCCSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCCCC---eE--EEEcCchHHHHHHHHHhccC---CCCC---CeEEEEECCHHHHHHH
Confidence 346778889999999999999997632 15 77 68999999999998752 1236 888877777665 44
Q ss_pred HHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhh
Q 013675 241 KAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (438)
Q Consensus 241 ~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~ 320 (438)
+.++.+|..++.+|+++++..++++++.+++++|++|.+++.+|.+|++.|+ +|+++|+++|||++++.+..
T Consensus 120 ~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~--- 191 (377)
T 3e77_A 120 EEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSK--- 191 (377)
T ss_dssp HHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSS---
T ss_pred HHHHHhCCceEEeccCCCcCCCCChHHhccCCCccEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCC---
Confidence 5667779888888987777788888888899999999999999999999998 47889999999999654333
Q ss_pred hhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCC--CccCCCCccCCCCCchHHHHH
Q 013675 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG--GLYVSPTVAGSRPGGLIAGAW 398 (438)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g--~~~~~~~~~gsr~~~~ia~~~ 398 (438)
++|+...+ .+++++|||+ +|+|+|++++|++.+.+.. ...+.+.. .........|+.+-..++++.
T Consensus 192 --------~id~~~~~--~~~~s~~K~~-gp~G~g~l~~~~~~l~~~~-~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~ 259 (377)
T 3e77_A 192 --------PVDVSKFG--VIFAGAQKNV-GSAGVTVVIVRDDLLGFAL-RECPSVLEYKVQAGNSSLYNTPPCFSIYVMG 259 (377)
T ss_dssp --------CCCGGGCS--EEEEEGGGTT-SCTTCEEEEEETTSCSCCC-TTSCGGGCHHHHHTTTTCSSCCCHHHHHHHH
T ss_pred --------CCchhhcC--EEEEeccccc-CCCccEEEEEcHHHHhhcc-CCCCchhhHHHHhhcCCCCCCchHHHHHHHH
Confidence 46776665 5889999996 8999999999876543221 11111100 000112234555556688899
Q ss_pred HHHHHHcHH-HHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 399 AALMSLGQE-GYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 399 aal~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
++++++-.+ |++++.++..+++++++++|+++||+++
T Consensus 260 ~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~ 297 (377)
T 3e77_A 260 LVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYV 297 (377)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEE
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCcee
Confidence 999988888 8999999999999999999999988763
No 48
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.89 E-value=1.7e-22 Score=203.14 Aligned_cols=237 Identities=14% Similarity=0.147 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHH-HhcCCCCCe-EEecCCCcCcHHHHH----h
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMR-NKRGITRPE-MIIPVSAHSAYDKAA----Q 244 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~-~~~G~~~~~-Viv~~~~h~s~~~a~----~ 244 (438)
+...++++++++++|.++++ + ++|+|+|+++..++++++.... ..+| ++ |+++...|++...++ +
T Consensus 71 ~~~~~l~~~la~~~g~~~~~----v--~~~~g~t~al~~al~~~~~~~~~~~~g---d~vii~~~~~~~~~~~~~~~~~~ 141 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARDGE----V--VVTDTTSINLFKVLSAALRVQATRSPE---RRVIVTETSNFPTDLYIAEGLAD 141 (416)
T ss_dssp GHHHHHHHHHHTTTTCCTTS----E--EECSCHHHHHHHHHHHHHHHHHHHSTT---CCEEEEETTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCccc----E--EEeCChhHHHHHHHHhhcccccccCCC---CcEEEEcCCCCCchHHHHHHHHH
Confidence 55667888999999997655 5 8899999999999888753211 1255 65 666778998765543 3
Q ss_pred hc--CcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhh
Q 013675 245 YF--NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (438)
Q Consensus 245 ~~--Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~ 322 (438)
.. |++++.+|+ +++|+++|+++|++|++++++||||.+.|+++|.++|+++|+++|+|++++.+..
T Consensus 142 ~~~~g~~~~~v~~-------~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~----- 209 (416)
T 1qz9_A 142 MLQQGYTLRLVDS-------PEELPQAIDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAV----- 209 (416)
T ss_dssp HHCSSCEEEEESS-------GGGHHHHCSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-----
T ss_pred HhcCCceEEEeCc-------HHHHHHHhCCCceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCc-----
Confidence 34 999999986 7899999999999999999999999999999999999999999999999863322
Q ss_pred cCCCCCCCccCCCCccEEEeCCCCCCCCCCCc-EEEEEecccccccchhcccccCCCc--------cC-----CCCccCC
Q 013675 323 LGYPIPPFDFSVQGVTSISVDVHKYGLAPKGT-SVVLYRNREIRKHQFVAVTEWSGGL--------YV-----SPTVAGS 388 (438)
Q Consensus 323 ~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~-g~l~~r~~~~~~~~~~~~~~~~g~~--------~~-----~~~~~gs 388 (438)
+++....++|++++++||+++++.|+ |+++.+++...... .....|.+.. +. .....|+
T Consensus 210 ------~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~l~-~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~ 282 (416)
T 1qz9_A 210 ------PVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVP-QPLSGWFGHSRQFAMEPRYEPSNGIARYLCGT 282 (416)
T ss_dssp ------CCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTTSC-CSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSC
T ss_pred ------CCChhhcCCCEEEecCcccCCCCCCCeEEEEECHHHHhccC-CCccccCccccccCCCCccCCCcchHHhcCCC
Confidence 22333346899999999998777887 99888755321111 1111111110 00 0011223
Q ss_pred CCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC-C--Cccc
Q 013675 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF-P--MFLP 435 (438)
Q Consensus 389 r~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~--g~~~ 435 (438)
.+...++++.++++.+..+++++..++..++++++.+.|+++ | ++++
T Consensus 283 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~ 332 (416)
T 1qz9_A 283 QPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTL 332 (416)
T ss_dssp CCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEE
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEE
Confidence 333345566778877766788899999999999999999885 6 6654
No 49
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.89 E-value=5.7e-22 Score=194.83 Aligned_cols=231 Identities=16% Similarity=0.148 Sum_probs=170.8
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH--HHh
Q 013675 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK--AAQ 244 (438)
Q Consensus 167 ~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~--a~~ 244 (438)
.+..++.+++++++++++|.++++ + ++|+|||+|+..++++++. +| ++|+++.++|+++.. .++
T Consensus 45 ~g~~~~~~~~~~~l~~~~g~~~~~----v--~~~~g~t~a~~~~~~~~~~-----~g---d~vl~~~~~~~~~~~~~~~~ 110 (359)
T 1svv_A 45 YGQDSHCAKAARLIGELLERPDAD----V--HFISGGTQTNLIACSLALR-----PW---EAVIATQLGHISTHETGAIE 110 (359)
T ss_dssp TTCSHHHHHHHHHHHHHHTCTTSE----E--EEESCHHHHHHHHHHHHCC-----TT---EEEEEETTSHHHHSSTTHHH
T ss_pred ccccHHHHHHHHHHHHHhCCCCcc----E--EEeCCchHHHHHHHHHHhC-----CC---CEEEEcccchHHHHHHHHHh
Confidence 344677889999999999987664 5 8999999999999999863 66 899999999999888 488
Q ss_pred hcCcEEEEeeCCCCCccCHHHHHHhhccC-------cEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccc
Q 013675 245 YFNIKLWRVPVDKEFRADVKAIKKYINRN-------TVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGG 314 (438)
Q Consensus 245 ~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~-------t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg 314 (438)
..|++++.+|.+ ++.+|+++|+++++++ +++|+++++ ||+|.+.| +++|.++|++||+++|+|+++++
T Consensus 111 ~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 188 (359)
T 1svv_A 111 ATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLA 188 (359)
T ss_dssp HTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHH
T ss_pred cCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchh
Confidence 889999999986 7889999999999876 899999999 68999988 89999999999999999999966
Q ss_pred hhhhhhhhcCCCCCCCccCC----CCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCC
Q 013675 315 FVLPFAKKLGYPIPPFDFSV----QGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (438)
Q Consensus 315 ~~~pf~~~~g~~~p~~~~~~----~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~ 390 (438)
+... . . +.+... .++|++++++||+ ++|.|+|+++.++ ++.+...... ..++.. .. .
T Consensus 189 ~~~~------~-~-~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~~~~-~~~~~~~~~~--~~~~~~----~~---~ 249 (359)
T 1svv_A 189 SALS------S-P-VNDLTLADIARLTDMFYIGATKA-GGMFGEALIILND-ALKPNARHLI--KQRGAL----MA---K 249 (359)
T ss_dssp HHHT------S-T-TCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEECSG-GGCTTHHHHH--HHTTCC----CT---T
T ss_pred hhhc------C-C-CcchhhhhhhhcCCEEEEecccC-CCCCceEEEEEcc-cHHHHHHHHH--hcCCcc----cc---c
Confidence 5432 1 1 122221 3469999999999 5688889877754 3332211100 001100 00 0
Q ss_pred CchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 391 GGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 391 ~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+......++ ..+...++++..++..++++++.+.| +.+++++
T Consensus 250 ~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~ 291 (359)
T 1svv_A 250 GWLLGIQFE--VLMKDNLFFELGAHSNKMAAILKAGL-EACGIRL 291 (359)
T ss_dssp THHHHHHHH--HHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTCCB
T ss_pred chhhHHHHH--HHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCeEE
Confidence 111111122 23455677888999999999999999 5667654
No 50
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.89 E-value=7.8e-22 Score=195.33 Aligned_cols=233 Identities=13% Similarity=-0.026 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEE
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~ 252 (438)
..++++.+++++|.+ + + ++|+|||+|+.+++++++.. .++| ++|+++.++|+++..++...|++++.
T Consensus 34 ~~~l~~~la~~~~~~--~----v--~~~~ggt~al~~~~~~~~~~--~~~g---d~Vl~~~~~~~~~~~~~~~~g~~~~~ 100 (375)
T 2fnu_A 34 SLLFEEALCEFLGVK--H----A--LVFNSATSALLTLYRNFSEF--SADR---NEIITTPISFVATANMLLESGYTPVF 100 (375)
T ss_dssp HHHHHHHHHHHHTCS--E----E--EEESCHHHHHHHHHHHSSCC--CTTS---CEEEECSSSCTHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhCCC--e----E--EEeCCHHHHHHHHHHHhccc--CCCC---CEEEECCCccHhHHHHHHHCCCEEEE
Confidence 446777889999986 3 5 89999999999999987310 1256 89999999999999999999999999
Q ss_pred eeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCcc
Q 013675 253 VPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDF 332 (438)
Q Consensus 253 v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~ 332 (438)
+|+++++.+|+++|+++++++|++|+++++ +|.+.|+++|.++|++||+++|+|++++.+..+... .+
T Consensus 101 ~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-------~~-- 168 (375)
T 2fnu_A 101 AGIKNDGNIDELALEKLINERTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNK-------KV-- 168 (375)
T ss_dssp CCBCTTSSBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE-------ET--
T ss_pred eccCCCCCCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCe-------ec--
Confidence 999887789999999999999999888887 899999999999999999999999999755432100 01
Q ss_pred CCC-CccEEEeCCCCCCCCCCCcEEEEEe-cccccccchhcccccC----CCccCCCCccCCCCCchHHHHHHHHHHHcH
Q 013675 333 SVQ-GVTSISVDVHKYGLAPKGTSVVLYR-NREIRKHQFVAVTEWS----GGLYVSPTVAGSRPGGLIAGAWAALMSLGQ 406 (438)
Q Consensus 333 ~~~-gvdsis~s~hK~~~~p~g~g~l~~r-~~~~~~~~~~~~~~~~----g~~~~~~~~~gsr~~~~ia~~~aal~~~g~ 406 (438)
... .+++.++++||++ +| |.|+++++ ++++.+.......... ...+ .....+.+.+.. .+.+++.....
T Consensus 169 ~~~~~i~~~s~s~~K~~-~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~a~~~~~~ 243 (375)
T 2fnu_A 169 GGFALASVFSFHAIKPI-TT-AEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEG-EVKSIGHNFRLN--EIQSALGLSQL 243 (375)
T ss_dssp TSSSSEEEEECCTTSSS-CC-SSCEEEEESCHHHHHHHHHHTBTTEEESSSSCE-EESSCCCBCCCC--HHHHHHHHHHH
T ss_pred cccCCeEEEeCCCCCCc-cc-cCceEEEeCCHHHHHHHHHHHhcCCcccccccc-ccccccccCCCC--HHHHHHHHHHH
Confidence 111 3677788889994 77 88888885 3444322111100000 0000 001112221222 22222322345
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 407 EGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 407 ~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+++++..++..++++++.+.|+++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 272 (375)
T 2fnu_A 244 KKAPFLMQKREEAALTYDRIFKDNPYFTP 272 (375)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTCSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccc
Confidence 67888999999999999999999888764
No 51
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.89 E-value=8.7e-22 Score=196.08 Aligned_cols=238 Identities=15% Similarity=0.101 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHHHHHhCC--CCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhc
Q 013675 169 VARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF 246 (438)
Q Consensus 169 ~~~~e~~~~~~~a~l~g~--~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~ 246 (438)
..++++++.+++++.+|. ++++ + ++|+|+|+|+.++++++. ++| ++|+++.++|.++..+++..
T Consensus 64 ~~~l~~~la~~l~~~~g~~~~~~~----i--~~~~g~~~a~~~~~~~l~-----~~g---d~vl~~~~~~~~~~~~~~~~ 129 (391)
T 3dzz_A 64 PAEYYKAVADWEEIEHRARPKEDW----C--VFASGVVPAISAMVRQFT-----SPG---DQILVQEPVYNMFYSVIEGN 129 (391)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCGGG----E--EEESCHHHHHHHHHHHHS-----CTT---CEEEECSSCCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhCCCCCHHH----E--EECCCHHHHHHHHHHHhC-----CCC---CeEEECCCCcHHHHHHHHHc
Confidence 467888999999999994 4444 6 899999999999999875 367 89999999999999999999
Q ss_pred CcEEEEeeCCC---CCccCHHHHHHhhc-cCcEEEEEecCCCCCccc---cCHHHHHHHHHHcCCeEEEeccccchhhhh
Q 013675 247 NIKLWRVPVDK---EFRADVKAIKKYIN-RNTVLIVGSAPGFPHGII---DPIQELGELALSHGTCLHVDLCLGGFVLPF 319 (438)
Q Consensus 247 Gi~v~~v~~~~---~~~~d~~~Le~~I~-~~t~~vv~~~~~~~tG~i---ddi~~I~~la~~~~i~lhVD~a~gg~~~pf 319 (438)
|.+++.+|++. ++.+|+++|+++++ +++++|++++|+||+|.+ +++++|+++|++||+++|+|++|+++...
T Consensus 130 g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~- 208 (391)
T 3dzz_A 130 GRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLT- 208 (391)
T ss_dssp TCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCS-
T ss_pred CCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCC-
Confidence 99999999852 45599999999998 789999999999999999 77999999999999999999999866531
Q ss_pred hhhcCCCCCCCccCC-CCcc--EEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHH
Q 013675 320 AKKLGYPIPPFDFSV-QGVT--SISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIA 395 (438)
Q Consensus 320 ~~~~g~~~p~~~~~~-~gvd--sis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia 395 (438)
|....++.... ...| +++.++||++. .+.++|+++.+++++............ ..+-+....+
T Consensus 209 ----g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 275 (391)
T 3dzz_A 209 ----DEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAG---------IGEPNLLAIP 275 (391)
T ss_dssp ----SCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHT---------CSSCCTTHHH
T ss_pred ----CCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHHhhc---------cCCCCHHHHH
Confidence 11011111111 1134 88999999953 445689988875655433211100000 0011112234
Q ss_pred HHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhc-CCCccc
Q 013675 396 GAWAALMSLGQEGYLENTKAIMEVSESIQKGLVL-FPMFLP 435 (438)
Q Consensus 396 ~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~ 435 (438)
++.+++.. +.+.+++..++..++++++.+.|++ +|++++
T Consensus 276 a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 315 (391)
T 3dzz_A 276 AAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVKV 315 (391)
T ss_dssp HHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 45555544 5667888999999999999999998 888764
No 52
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.88 E-value=7.6e-22 Score=197.22 Aligned_cols=238 Identities=12% Similarity=0.069 Sum_probs=175.1
Q ss_pred CcccchhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcH
Q 013675 162 HLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY 239 (438)
Q Consensus 162 ~~~~~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~ 239 (438)
.|...++..++++++.+++.+.+|.+ +++ + ++|+|||+|+.++++++. .+| ++|+++.++|+++
T Consensus 73 ~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~----v--~~~~g~t~al~~~~~~l~-----~~g---d~Vl~~~~~~~~~ 138 (389)
T 1o4s_A 73 KYTDPRGIYELREGIAKRIGERYKKDISPDQ----V--VVTNGAKQALFNAFMALL-----DPG---DEVIVFSPVWVSY 138 (389)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHTCCCCGGG----E--EEESHHHHHHHHHHHHHC-----CTT---CEEEEEESCCTTH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCHHH----E--EEecCHHHHHHHHHHHhC-----CCC---CEEEEcCCCchhH
Confidence 34334567788888888888888874 443 5 899999999999999874 366 8999999999999
Q ss_pred HHHHhhcCcEEEEeeCCC--CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccc
Q 013675 240 DKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGG 314 (438)
Q Consensus 240 ~~a~~~~Gi~v~~v~~~~--~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg 314 (438)
...++..|++++.+|+++ ++.+|+++|++++++++++|++++|+||+|.+.| +++|+++|+++|+++++|++|++
T Consensus 139 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~ 218 (389)
T 1o4s_A 139 IPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDS 218 (389)
T ss_dssp HHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred HHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccc
Confidence 999999999999999975 5789999999999989999999999999999977 99999999999999999999987
Q ss_pred hhhhhhhhcCCCCCCCccC-CCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCC
Q 013675 315 FVLPFAKKLGYPIPPFDFS-VQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG 391 (438)
Q Consensus 315 ~~~pf~~~~g~~~p~~~~~-~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~ 391 (438)
+... |...+...+. ..+.|+++.++||++ +++| +|+++.++ ++.+........+. .+
T Consensus 219 ~~~~-----g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~l~~~~-~~~~~l~~~~~~~~-------------~~ 278 (389)
T 1o4s_A 219 LVYT-----DEFTSILDVSEGFDRIVYINGFSKSH-SMTGWRVGYLISSE-KVATAVSKIQSHTT-------------SC 278 (389)
T ss_dssp SBCS-----SCCCCHHHHCSSSTTEEEEEESTTTT-TCGGGCCEEEECCH-HHHHHHHHHHHHHT-------------CS
T ss_pred cccC-----CCCCCHhhcCCCCCcEEEEeechhhc-CCcccceEEEEeCH-HHHHHHHHHhhhcc-------------cC
Confidence 6531 1000001111 246799999999994 5555 89887754 33322111111000 00
Q ss_pred chHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 392 GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 392 ~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
....+++++...+.. ++++..++..++++++.+.|+++ ++++
T Consensus 279 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 320 (389)
T 1o4s_A 279 INTVAQYAALKALEV-DNSYMVQTFKERKNFVVERLKKM-GVKF 320 (389)
T ss_dssp CCHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred CCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhc-CCee
Confidence 011234444444432 37778888899999999999886 5543
No 53
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.88 E-value=6.7e-22 Score=195.63 Aligned_cols=225 Identities=16% Similarity=0.149 Sum_probs=169.6
Q ss_pred HHHHHHHHHHhCC-CCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEE
Q 013675 174 AEVIAMTAALLGN-KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (438)
Q Consensus 174 ~~~~~~~a~l~g~-~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~ 252 (438)
.++++.+++++|. ++++ + ++|+|||+|+.++++++. ++| ++|+++.++|.++...++..|++++.
T Consensus 70 ~~l~~~la~~~g~~~~~~----i--~~~~g~t~a~~~~~~~~~-----~~g---d~Vl~~~~~~~~~~~~~~~~g~~~~~ 135 (367)
T 3euc_A 70 EALRAKLKEVMQVPAGME----V--LLGNGSDEIISMLALAAA-----RPG---AKVMAPVPGFVMYAMSAQFAGLEFVG 135 (367)
T ss_dssp HHHHHHHHHHHTCCTTCE----E--EEEEHHHHHHHHHHHHTC-----CTT---CEEEEEESCSCCSCHHHHTTTCEEEE
T ss_pred HHHHHHHHHHhCCCCcce----E--EEcCCHHHHHHHHHHHHc-----CCC---CEEEEcCCCHHHHHHHHHHcCCeEEE
Confidence 3566678889998 4443 5 899999999999999875 367 89999999999999999999999999
Q ss_pred eeCCCCCccCHHHHHHhhcc-CcEEEEEecCCCCCcccc---CHHHHHHHHHHc--CCeEEEeccccchhhhhhhhcCCC
Q 013675 253 VPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIID---PIQELGELALSH--GTCLHVDLCLGGFVLPFAKKLGYP 326 (438)
Q Consensus 253 v~~~~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~id---di~~I~~la~~~--~i~lhVD~a~gg~~~pf~~~~g~~ 326 (438)
+|+++++.+|++++++++++ +|++|++++|+||+|.+. ++++|+++|++| |+++++|++|+++... +.
T Consensus 136 v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~-----~~- 209 (367)
T 3euc_A 136 VPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQE-----SW- 209 (367)
T ss_dssp EECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSC-----CS-
T ss_pred ecCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhccc-----ch-
Confidence 99999999999999999998 899999999999999995 477888889999 9999999999865410 10
Q ss_pred CCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcH
Q 013675 327 IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ 406 (438)
Q Consensus 327 ~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~ 406 (438)
. ......+.+++..++||++..+.++|+++.+ +++..........| +-+....+++.++++. .
T Consensus 210 ~--~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~~~~~~~~~~------------~~~~~~~~a~~~~l~~--~ 272 (367)
T 3euc_A 210 M--SRLTDFGNLLVMRTVSKLGLAGIRLGYVAGD-PQWLEQLDKVRPPY------------NVNVLTEATALFALEH--V 272 (367)
T ss_dssp G--GGGGTCTTEEEEEECCCTTSCSCCEEEEEEC-HHHHHHHGGGCCSS------------CCCHHHHHHHHHHHTT--H
T ss_pred H--HHHhhCCCEEEEecchhhcccccCceeeeeC-HHHHHHHHHhCCCC------------CCCHHHHHHHHHHhcC--H
Confidence 1 1223345678888999996566678988774 43332211111111 1111122333444432 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 407 EGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 407 ~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+++++..++..++++++.+.|+++|++++
T Consensus 273 ~~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 301 (367)
T 3euc_A 273 AVLDEQAAQLRAERSRVAEGMAAHGGVTV 301 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcEE
Confidence 66788899999999999999999988763
No 54
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.88 E-value=4.9e-21 Score=190.91 Aligned_cols=242 Identities=17% Similarity=0.158 Sum_probs=174.1
Q ss_pred cccchhHHHHHHHHHHHHHHHhCCCCCCCCCc-cceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQ-VCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK 241 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~-v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~ 241 (438)
|...++..++++++.+++.+.+|.+.+. ++ + ++|+|||+|+.++++++. .+| ++|+++.++|+++..
T Consensus 59 y~~~~g~~~l~~~la~~~~~~~g~~~~~--~~~v--~~~~g~~~a~~~~~~~~~-----~~g---d~vl~~~~~~~~~~~ 126 (389)
T 1gd9_A 59 YGPNIGLLELREAIAEKLKKQNGIEADP--KTEI--MVLLGANQAFLMGLSAFL-----KDG---EEVLIPTPAFVSYAP 126 (389)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCT--TTSE--EEESSTTHHHHHHHTTTC-----CTT---CEEEEEESCCTTHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCeE--EEcCChHHHHHHHHHHhC-----CCC---CEEEEcCCCchhHHH
Confidence 4334566788888888888888853221 12 4 899999999999998874 256 899999999999999
Q ss_pred HHhhcCcEEEEeeCCC--CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccchh
Q 013675 242 AAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFV 316 (438)
Q Consensus 242 a~~~~Gi~v~~v~~~~--~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg~~ 316 (438)
+++..|++++.+|+++ ++.+|+++|++++++++++|++++|+||||.+.| +++|+++|++||+++++|++|+++.
T Consensus 127 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~ 206 (389)
T 1gd9_A 127 AVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFI 206 (389)
T ss_dssp HHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB
T ss_pred HHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcc
Confidence 9999999999999985 5679999999999989999999999999999975 8999999999999999999998765
Q ss_pred hhhhhhcCCCCCCC-ccC-CCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCCc
Q 013675 317 LPFAKKLGYPIPPF-DFS-VQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG 392 (438)
Q Consensus 317 ~pf~~~~g~~~p~~-~~~-~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~ 392 (438)
.. |.+.+++ .+. ..+.|+++.++||+ ++++| +|+++.++ ++.+........+. ++.+..
T Consensus 207 ~~-----~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~r~G~~~~~~-~~~~~l~~~~~~~~----------~~~~~~ 269 (389)
T 1gd9_A 207 YD-----DARHYSIASLDGMFERTITVNGFSKT-FAMTGWRLGFVAAPS-WIIERMVKFQMYNA----------TCPVTF 269 (389)
T ss_dssp CT-----TCCCCCGGGSTTCGGGEEEEEESTTT-TTCGGGCCEEEECCH-HHHHHHHHHHTTTT----------CSCCHH
T ss_pred cC-----CCCCCCHhhccCCCCCEEEEecChhh-cCCcccceEEEEECH-HHHHHHHHHHhhhc----------cCCCHH
Confidence 41 1000011 111 24578999999998 56555 79887763 33322111111110 011111
Q ss_pred hHHHHHHHHHHHcHH--HHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 393 LIAGAWAALMSLGQE--GYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 393 ~ia~~~aal~~~g~~--g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
..+++.++++. +.. ++++..++..++++++.+.|+++ |+++
T Consensus 270 ~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 312 (389)
T 1gd9_A 270 IQYAAAKALKD-ERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPT 312 (389)
T ss_dssp HHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred HHHHHHHHHhC-CCcchHHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence 12233333332 334 67888889999999999999887 5543
No 55
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.88 E-value=4.8e-21 Score=191.15 Aligned_cols=237 Identities=16% Similarity=0.157 Sum_probs=171.8
Q ss_pred CcccchhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcH
Q 013675 162 HLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY 239 (438)
Q Consensus 162 ~~~~~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~ 239 (438)
+|....+..++++++.+++.+.+|.+ +++ + ++|+||++|+.++++++. .+| ++|+++.++|+.+
T Consensus 63 ~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~----i--~~t~g~~~al~~~~~~l~-----~~g---d~Vlv~~p~y~~~ 128 (385)
T 1b5p_A 63 KYAPPAGIPELREALAEKFRRENGLSVTPEE----T--IVTVGGSQALFNLFQAIL-----DPG---DEVIVLSPYWVSY 128 (385)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHTTCCCCCGGG----E--EEESHHHHHHHHHHHHHC-----CTT---CEEEEEESCCTHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCChHH----E--EEcCChHHHHHHHHHHhc-----CCC---CEEEEcCCCchhH
Confidence 34334456778888888888877764 343 6 899999999999999875 367 8999999999999
Q ss_pred HHHHhhcCcEEEEeeCCC--CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccc
Q 013675 240 DKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGG 314 (438)
Q Consensus 240 ~~a~~~~Gi~v~~v~~~~--~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg 314 (438)
..+++..|++++.+|+++ ++.+|+++++++++++|++|++++|+||||.+.+ +++|+++|++||+++++|++|+.
T Consensus 129 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 208 (385)
T 1b5p_A 129 PEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEH 208 (385)
T ss_dssp HHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred HHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchh
Confidence 999999999999999985 5689999999999989999999999999999866 88999999999999999999986
Q ss_pred hhhhhhhhcCCCCCCC-ccCCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCC
Q 013675 315 FVLPFAKKLGYPIPPF-DFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG 391 (438)
Q Consensus 315 ~~~pf~~~~g~~~p~~-~~~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~ 391 (438)
+... |. .+++ +... +.+++..+++|. ++++| +|+++.++ ++.+........+. . +
T Consensus 209 ~~~~-----~~-~~~~~~~~~-~~~i~~~s~SK~-~~~~G~RiG~~~~~~-~~~~~l~~~~~~~~------------~-~ 266 (385)
T 1b5p_A 209 LLYE-----GE-HFSPGRVAP-EHTLTVNGAAKA-FAMTGWRIGYACGPK-EVIKAMASVSRQST------------T-S 266 (385)
T ss_dssp CBSS-----SC-CCCGGGTCT-TTEEEEEESTTT-TTCGGGCCEEEECCH-HHHHHHHHHHHTTT------------C-S
T ss_pred cccC-----CC-CCCHHHcCC-CCEEEEEechhh-cCCcccceEEEEeCH-HHHHHHHHHHhhcc------------C-C
Confidence 5431 00 1111 1111 567888899999 56556 89987753 33322111111100 0 0
Q ss_pred chHHHHHHHHHHH-----cHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 392 GLIAGAWAALMSL-----GQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 392 ~~ia~~~aal~~~-----g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
....+++++...+ +.+.+++..++..+.++++.+.|+++ |+++
T Consensus 267 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 314 (385)
T 1b5p_A 267 PDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKA 314 (385)
T ss_dssp CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCB
T ss_pred CCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCee
Confidence 0111333332223 34557778888888999999999876 5543
No 56
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.87 E-value=1.6e-21 Score=200.90 Aligned_cols=242 Identities=14% Similarity=0.098 Sum_probs=173.6
Q ss_pred cchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH---
Q 013675 165 IFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK--- 241 (438)
Q Consensus 165 ~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~--- 241 (438)
..+...++|+++++++++++|+++++...++ .+++ |++++..++.++. ++| |+|+++...|.++..
T Consensus 84 ~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V--~~~s-Gs~an~~~~~all-----~pG---D~Vl~~~~~~~~~~~~~~ 152 (483)
T 1rv3_A 84 GTEHIDELETLCQKRALQAYGLDPQCWGVNV--QPYS-GSPANFAVYTALV-----EPH---GRIMGLDLPDGGHLTHGF 152 (483)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCTTTEEEEC--CCSS-HHHHHHHHHHHHT-----CTT---CEEEEECGGGTCCGGGCC
T ss_pred cchhHHHHHHHHHHHHHHHhCCCcccCceEE--EECC-cHHHHHHHHHHhc-----CCC---CEEEEecCccCcCcchhh
Confidence 3456788999999999999999853200003 4555 5588888888775 377 999999999887653
Q ss_pred -----HHhhcC--cEEEEeeCC-CCCccCHHHHHHhhc-cCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 242 -----AAQYFN--IKLWRVPVD-KEFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 242 -----a~~~~G--i~v~~v~~~-~~~~~d~~~Le~~I~-~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
.+...| ++.+.++++ +++.+|+++|+++++ ++|++|++ +++|++ .+.|+++|+++|+++|+++++|+++
T Consensus 153 ~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah 230 (483)
T 1rv3_A 153 MTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAH 230 (483)
T ss_dssp BCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred hhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccc
Confidence 234445 455555557 478999999999998 78999999 888877 8899999999999999999999998
Q ss_pred cchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEeccccc-----------ccchhcccccCCCccC
Q 013675 313 GGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIR-----------KHQFVAVTEWSGGLYV 381 (438)
Q Consensus 313 gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~-----------~~~~~~~~~~~g~~~~ 381 (438)
+.+..+ .|....++ .++|+++.++||++.||.| |+++++++... ......... .
T Consensus 231 ~~g~~~----~~~~~~p~----~~~div~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~------~ 295 (483)
T 1rv3_A 231 ISGLVV----AGVVPSPF----EHCHVVTTTTHKTLRGCRA-GMIFYRRGVRSVDPKTGKEILYNLESLINSA------V 295 (483)
T ss_dssp THHHHH----HTSSCCGG----GTCSEEEEESSGGGCCCSC-EEEEEECSBCC-------CCBCCHHHHHHHH------H
T ss_pred hhcccc----cCCCCCCC----CCCcEEEecCcccCCCCCc-eEEEEcchhhhhccccCcchhhHHHHHhhhh------c
Confidence 755543 12100011 2689999999999889988 99998865220 000000000 0
Q ss_pred CCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 382 SPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 382 ~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+...|+.....++++.+++......++++..++..++++++.+.|+++ |+++
T Consensus 296 ~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 348 (483)
T 1rv3_A 296 FPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GYKI 348 (483)
T ss_dssp TTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred CCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CCEe
Confidence 0112334444456777888887766789999999999999999999887 6654
No 57
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.87 E-value=4.1e-21 Score=190.65 Aligned_cols=229 Identities=14% Similarity=0.051 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEE
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~ 252 (438)
..++++.+++++|.+ . + ++|+|||+|+.++++++.. ++| ++|+++..+|+++..+++..|++++.
T Consensus 38 ~~~l~~~la~~~~~~--~----~--i~~~sgt~al~~~l~~l~~----~~g---d~Vi~~~~~~~~~~~~~~~~g~~~~~ 102 (373)
T 3frk_A 38 DKKFEQEFADYCNVN--Y----C--IGCGNGLDALHLILKGYDI----GFG---DEVIVPSNTFIATALAVSYTGAKPIF 102 (373)
T ss_dssp HHHHHHHHHHHHTSS--E----E--EEESCHHHHHHHHHHHTTC----CTT---CEEEEETTSCTHHHHHHHHHSCEEEE
T ss_pred HHHHHHHHHHHhCCC--e----E--EEeCCHHHHHHHHHHHcCC----CCc---CEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 344555788888886 2 3 8999999999999998721 356 89999999999999999999999999
Q ss_pred eeCC-CCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCc
Q 013675 253 VPVD-KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (438)
Q Consensus 253 v~~~-~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~ 331 (438)
+|++ +++.+|+++++++++++|++|+ ++|++|.+.|+++|.++|+++|+++|+|++++.+.. ++
T Consensus 103 ~~~~~~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~------------~~ 167 (373)
T 3frk_A 103 VEPDIRTYNIDPSLIESAITEKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSL------------YK 167 (373)
T ss_dssp ECEETTTTEECGGGTGGGCCTTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCE------------ET
T ss_pred EeccccccCcCHHHHHHhcCCCCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCE------------EC
Confidence 9998 4789999999999999999888 556799999999999999999999999999874432 11
Q ss_pred cCCCC--ccEEEeC--CCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHH
Q 013675 332 FSVQG--VTSISVD--VHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQE 407 (438)
Q Consensus 332 ~~~~g--vdsis~s--~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~ 407 (438)
....+ .|+++++ .||++.++...|+++.+++++.+........+....+ .....|...... ++.+++.....+
T Consensus 168 ~~~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~g~~~~~~--~~~aa~~~~~~~ 244 (373)
T 3frk_A 168 GMKVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEKKY-HHIYKGFNSRLD--ELQAGFLRVKLK 244 (373)
T ss_dssp TEETTSSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSBTT-BCCSCCCBCCCC--HHHHHHHHHHHH
T ss_pred CEeccccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCcccCC-ccccccccCCCC--HHHHHHHHHHHH
Confidence 11222 4677666 7799543244566666655443321111111100001 111122221112 344444444557
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 408 GYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 408 g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
++++..++..++++++.+.|++++ +++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~ 271 (373)
T 3frk_A 245 YLDKWNEERRKIAQKYIAGINNPN-VII 271 (373)
T ss_dssp THHHHHHHHHHHHHHHHHHCCCTT-EEC
T ss_pred HHHHHHHHHHHHHHHHHHHhccCc-eEe
Confidence 788889999999999999998875 544
No 58
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.87 E-value=4.4e-21 Score=191.01 Aligned_cols=238 Identities=16% Similarity=0.115 Sum_probs=174.5
Q ss_pred hHHHHHHHHHHHHHHHhC--CCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhh
Q 013675 168 SVARFEAEVIAMTAALLG--NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY 245 (438)
Q Consensus 168 ~~~~~e~~~~~~~a~l~g--~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~ 245 (438)
+..++++++.+++++++| .++++ + ++|+|||+|+.++++++. ++| ++|+++.++|.++...++.
T Consensus 68 ~~~~~~~~l~~~l~~~~g~~~~~~~----v--~~~~g~~~a~~~~~~~~~-----~~g---d~vl~~~~~~~~~~~~~~~ 133 (391)
T 4dq6_A 68 RPDSYNESIVNWLYRRHNWKIKSEW----L--IYSPGVIPAISLLINELT-----KAN---DKIMIQEPVYSPFNSVVKN 133 (391)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGG----E--EEESCHHHHHHHHHHHHS-----CTT---CEEEECSSCCTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCcHHH----e--EEcCChHHHHHHHHHHhC-----CCC---CEEEEcCCCCHHHHHHHHH
Confidence 346788999999999999 55554 6 899999999999999875 366 8999999999999999999
Q ss_pred cCcEEEEeeCC--C--CCccCHHHHHHhhccCcEEEEEecCCCCCccc---cCHHHHHHHHHHcCCeEEEeccccchhhh
Q 013675 246 FNIKLWRVPVD--K--EFRADVKAIKKYINRNTVLIVGSAPGFPHGII---DPIQELGELALSHGTCLHVDLCLGGFVLP 318 (438)
Q Consensus 246 ~Gi~v~~v~~~--~--~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~i---ddi~~I~~la~~~~i~lhVD~a~gg~~~p 318 (438)
.|++++.+|++ + ++.+|++++++++++ +++|++++|+||+|.+ +++++|+++|++||+++++|++|+++...
T Consensus 134 ~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 212 (391)
T 4dq6_A 134 NNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILK 212 (391)
T ss_dssp TTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCT
T ss_pred cCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccC
Confidence 99999999987 2 456999999999998 9999999999999999 66889999999999999999999875431
Q ss_pred hhhhcCCCCCCCccCC---CCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchH
Q 013675 319 FAKKLGYPIPPFDFSV---QGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLI 394 (438)
Q Consensus 319 f~~~~g~~~p~~~~~~---~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~i 394 (438)
|...+++.... .+..++..++||++. .+.++|+++.+++++..........+. .++-+....
T Consensus 213 -----g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 278 (391)
T 4dq6_A 213 -----KHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRID---------IKRNNCFSL 278 (391)
T ss_dssp -----TCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTT---------CCCCCHHHH
T ss_pred -----CCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHhhc---------CCCCCHHHH
Confidence 11011111111 123488889999953 445689888776454432211111110 001111122
Q ss_pred HHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhc-CCCccc
Q 013675 395 AGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVL-FPMFLP 435 (438)
Q Consensus 395 a~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~ 435 (438)
+++.+++.. +.+.+++..++..++++++.+.|++ +|++++
T Consensus 279 ~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 319 (391)
T 4dq6_A 279 VATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLKV 319 (391)
T ss_dssp HHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEe
Confidence 344444443 4566788889999999999999987 788764
No 59
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.87 E-value=2.9e-21 Score=192.48 Aligned_cols=238 Identities=14% Similarity=0.123 Sum_probs=176.5
Q ss_pred CcccchhHHHHHHHHHHHHHHHhCCC--CC-CCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc
Q 013675 162 HLDIFQSVARFEAEVIAMTAALLGNK--EK-ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (438)
Q Consensus 162 ~~~~~~~~~~~e~~~~~~~a~l~g~~--~~-~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s 238 (438)
.|...++..++++++.+++.+.+|.+ ++ + + ++|+|+|+|+.++++++. .+| ++|+++.+.|++
T Consensus 62 ~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~----v--~~~~g~~~a~~~~~~~~~-----~~g---d~vl~~~p~~~~ 127 (386)
T 1u08_A 62 QYAPMTGVQALREAIAQKTERLYGYQPDADSD----I--TVTAGATEALYAAITALV-----RNG---DEVICFDPSYDS 127 (386)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTT----E--EEESSHHHHHHHHHHHHC-----CTT---CEEEEEESCCTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC----E--EEcCChHHHHHHHHHHhC-----CCC---CEEEEeCCCchh
Confidence 34334567788999999998888864 44 4 6 899999999999999874 356 899999999999
Q ss_pred HHHHHhhcCcEEEEeeCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccc
Q 013675 239 YDKAAQYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGG 314 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg 314 (438)
+...++..|++++.+|+++ ++.+|+++|++++++++++|++++|+||||.+.| +++|+++|++||+++++|++|++
T Consensus 128 ~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 207 (386)
T 1u08_A 128 YAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEH 207 (386)
T ss_dssp HHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTT
T ss_pred HHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccc
Confidence 9999999999999999976 6889999999999989999999999999999976 68999999999999999999987
Q ss_pred hhhhhhhhcCCCCCCC-ccC-CCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcc--cccCCCccCCCCccCC
Q 013675 315 FVLPFAKKLGYPIPPF-DFS-VQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAV--TEWSGGLYVSPTVAGS 388 (438)
Q Consensus 315 ~~~pf~~~~g~~~p~~-~~~-~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~--~~~~g~~~~~~~~~gs 388 (438)
+... |...+++ .+. ..+.|+++.++||+ ++++| +|+++.++ ++.+...... ..|.
T Consensus 208 ~~~~-----g~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~r~G~~~~~~-~~~~~l~~~~~~~~~~------------ 268 (386)
T 1u08_A 208 INFS-----QQGHASVLAHPQLRERAVAVSSFGKT-YHMTGWKVGYCVAPA-PISAEIRKVHQYLTFS------------ 268 (386)
T ss_dssp CBCC-----SSCCCCGGGSHHHHTTEEEEEEHHHH-TTCGGGCCEEEECCH-HHHHHHHHHHHHHTSS------------
T ss_pred cccC-----CCCCcChhcccCccCcEEEEecchhh-cCCcccceEEEEcCH-HHHHHHHHHHHhhccC------------
Confidence 5431 1101122 111 24679999999999 55555 89888764 3332211100 0111
Q ss_pred CCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 389 r~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
.+....+++.++++. +.+++++..++..++++++.+.|+++ +++
T Consensus 269 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 312 (386)
T 1u08_A 269 VNTPAQLALADMLRA-EPEHYLALPDFYRQKRDILVNALNES-RLE 312 (386)
T ss_dssp CCHHHHHHHHHHHHH-CTHHHHTHHHHHHHHHHHHHHHTTSS-SCE
T ss_pred CChHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 111112334444443 35678888899999999999999876 554
No 60
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.87 E-value=1.1e-20 Score=186.49 Aligned_cols=227 Identities=12% Similarity=0.059 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEE
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~ 252 (438)
..++++.+++++|.++++ + ++|+|||+++.++++++. ++| ++|+++.++|.++...++..|++++.
T Consensus 69 ~~~lr~~la~~~~~~~~~----v--~~~~g~t~a~~~~~~~~~-----~~g---d~vl~~~~~~~~~~~~~~~~g~~~~~ 134 (363)
T 3ffh_A 69 ASSLRKEVADFYQLEEEE----L--IFTAGVDELIELLTRVLL-----DTT---TNTVMATPTFVQYRQNALIEGAEVRE 134 (363)
T ss_dssp CHHHHHHHHHHHTCCGGG----E--EEESSHHHHHHHHHHHHC-----STT---CEEEEEESSCHHHHHHHHHHTCEEEE
T ss_pred hHHHHHHHHHHhCCChhh----E--EEeCCHHHHHHHHHHHHc-----cCC---CEEEEcCCChHHHHHHHHHcCCEEEE
Confidence 356777899999987765 6 899999999999999874 366 89999999999999999999999999
Q ss_pred eeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHc--CCeEEEeccccchhhhhhhhcCCCCCCC
Q 013675 253 VPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH--GTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (438)
Q Consensus 253 v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~--~i~lhVD~a~gg~~~pf~~~~g~~~p~~ 330 (438)
+|.++++.+|+++++++++++|++|++++|+||||.+.|++++.++++.+ |+++|+|++|+++.. +...+..
T Consensus 135 v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~------~~~~~~~ 208 (363)
T 3ffh_A 135 IPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVT------PQPEKHE 208 (363)
T ss_dssp EECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCS------SCCCCCG
T ss_pred ecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcC------ccccCHH
Confidence 99998899999999999999999999999999999999999999999988 999999999986553 1000111
Q ss_pred cc-CCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHH
Q 013675 331 DF-SVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQE 407 (438)
Q Consensus 331 ~~-~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~ 407 (438)
.. ...+.+++..+++|+ +++.| +|+++.+ +++..........| +-+....+++.+++. ..+
T Consensus 209 ~~~~~~~~~i~~~s~sK~-~g~~G~r~G~~~~~-~~~~~~l~~~~~~~------------~~~~~~~~~~~~~l~--~~~ 272 (363)
T 3ffh_A 209 KLVRTYKNLIITRTFSKI-YGLASARVGYGIAD-KEIIRQLNIVRPPF------------NTTSIGQKLAIEAIK--DQA 272 (363)
T ss_dssp GGGGTCTTEEEEEESSST-TCCSSCCCEEEEEC-HHHHHHHHHTCCSC------------CCBHHHHHHHHHHHH--CHH
T ss_pred HHhhcCCCEEEEeechhh-hcCchhceeeeecC-HHHHHHHHHhCCCC------------CCCHHHHHHHHHHhc--CHH
Confidence 11 122345777888999 45445 4988874 44433221111111 111111223333343 236
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 408 GYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 408 g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
++++..++..++++++.+.|++++++++
T Consensus 273 ~~~~~~~~~~~~~~~l~~~l~~~~g~~~ 300 (363)
T 3ffh_A 273 FIGECRTSNANGIKQYEAFAKRFEKVKL 300 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceE
Confidence 6788889999999999999998767654
No 61
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.87 E-value=1.4e-22 Score=202.27 Aligned_cols=230 Identities=14% Similarity=0.031 Sum_probs=167.8
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCC-CCCCccceeE-cCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc--HHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKEK-ASGGQVCGNM-TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--YDK 241 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~~-~~~~~v~g~~-t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s--~~~ 241 (438)
++.+.++.+++++.+++++|++++ + + +| |+|||+|+.+++..+. ++| +++++....|.+ +..
T Consensus 67 ~~~~~~~~~~ar~~la~ll~~~~~~e----v--if~t~~~T~a~n~ai~~l~-----~~g---d~v~~~~~~~~~~~~~~ 132 (386)
T 3qm2_A 67 GKEFIQVAEEAEQDFRDLLNIPSNYK----V--LFCHGGGRGQFAGVPLNLL-----GDK---TTADYVDAGYWAASAIK 132 (386)
T ss_dssp ------CCHHHHHHHHHHHTCCTTEE----E--EEEESCTTHHHHHHHHHHC-----TTC---CEEEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCce----E--EEEcCCchHHHHHHHHhcc-----CCC---CeEEEEeCCHHHHHHHH
Confidence 456677888999999999999753 4 5 77 6999999999998874 256 777655554444 445
Q ss_pred HHhhcCcEEEEeeCC--CCCc-cCHHHHHHhhccCcEEEEEecCCCCCccc-cCHHHHHHHHHHcCCeEEEeccccchhh
Q 013675 242 AAQYFNIKLWRVPVD--KEFR-ADVKAIKKYINRNTVLIVGSAPGFPHGII-DPIQELGELALSHGTCLHVDLCLGGFVL 317 (438)
Q Consensus 242 a~~~~Gi~v~~v~~~--~~~~-~d~~~Le~~I~~~t~~vv~~~~~~~tG~i-ddi~~I~~la~~~~i~lhVD~a~gg~~~ 317 (438)
.++.+| +++.+|++ +++. +|+++++++++++|++|.+++.+|.+|++ .|+++|+ +|+++|||++++.+..
T Consensus 133 ~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~ 206 (386)
T 3qm2_A 133 EAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSA 206 (386)
T ss_dssp HHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSS
T ss_pred HHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCC
Confidence 567779 99999998 5665 89999999999999999999999999995 9999986 7999999999653333
Q ss_pred hhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccC--CCccCCCCccCCCCCchHH
Q 013675 318 PFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWS--GGLYVSPTVAGSRPGGLIA 395 (438)
Q Consensus 318 pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~--g~~~~~~~~~gsr~~~~ia 395 (438)
++|+...+ .+++++|||+ +|+|+|++++|++.+.+.. ...+.+. +.........|+.+...++
T Consensus 207 -----------pidv~~~~--~~~~s~hK~l-GP~G~g~l~v~~~~~~~~~-~~~p~~~~~~~~~~~~~~~gTp~v~~i~ 271 (386)
T 3qm2_A 207 -----------PLDVSRYG--VIYAGAQKNI-GPAGLTLVIVREDLLGKAH-ESCPSILDYTVLNDNDSMFNTPPTFAWY 271 (386)
T ss_dssp -----------CCCGGGCS--EEEEETTTTT-CCTTEEEEEEEGGGCSCCC-TTSCGGGCHHHHHHC-------CCSHHH
T ss_pred -----------CCCccccC--EEEEeccccc-CCCccEEEEECHHHHhhhc-ccCCcHHHHHHHhhcCCCCCCCcHHHHH
Confidence 46776665 5679999996 7999999999876432211 1111110 0000111223555666788
Q ss_pred HHHHHHHHHcHH-HHHHHHHHHHHHHHHHHHHhhcC
Q 013675 396 GAWAALMSLGQE-GYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 396 ~~~aal~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
++.++++.+-.. |++++.++..+++++++++|+++
T Consensus 272 ~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~ 307 (386)
T 3qm2_A 272 LSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS 307 (386)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999998888 89999999999999999999987
No 62
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.87 E-value=3.8e-21 Score=193.16 Aligned_cols=240 Identities=17% Similarity=0.160 Sum_probs=175.4
Q ss_pred cccchhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHH
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD 240 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~ 240 (438)
|...++..++++++.+++.+.+|.+ +++ + ++|+|||+|+.++++++. ++| ++|+++.++|+++.
T Consensus 74 y~~~~g~~~l~~~la~~l~~~~g~~~~~~~----v--~~t~g~~~al~~~~~~l~-----~~g---d~Vl~~~~~~~~~~ 139 (406)
T 1xi9_A 74 YGDSEGLPELRKAIVEREKRKNGVDITPDD----V--RVTAAVTEALQLIFGALL-----DPG---DEILVPGPSYPPYT 139 (406)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCGGG----E--EEESHHHHHHHHHHHHHC-----CTT---CEEEEEESCCHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCHHH----E--EEcCChHHHHHHHHHHhC-----CCC---CEEEEcCCCCccHH
Confidence 4334566788888888888887754 333 5 899999999999999874 366 89999999999999
Q ss_pred HHHhhcCcEEEEeeCCC--CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccch
Q 013675 241 KAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGF 315 (438)
Q Consensus 241 ~a~~~~Gi~v~~v~~~~--~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg~ 315 (438)
.+++..|++++.+|+++ ++.+|+++|++++++++++|++++|+||+|.+.| +++|+++|++||+++++|++|+++
T Consensus 140 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~ 219 (406)
T 1xi9_A 140 GLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLM 219 (406)
T ss_dssp HHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTC
T ss_pred HHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCcccc
Confidence 99999999999999874 5679999999999999999999999999999866 899999999999999999999875
Q ss_pred hhhhhhhcCCCCCCCccCCCCc-cEEEeCCCCCCCCCCC--cEEEEE-ecc----cccccchhcccccCCCccCCCCccC
Q 013675 316 VLPFAKKLGYPIPPFDFSVQGV-TSISVDVHKYGLAPKG--TSVVLY-RNR----EIRKHQFVAVTEWSGGLYVSPTVAG 387 (438)
Q Consensus 316 ~~pf~~~~g~~~p~~~~~~~gv-dsis~s~hK~~~~p~g--~g~l~~-r~~----~~~~~~~~~~~~~~g~~~~~~~~~g 387 (438)
... +...+...+. .+. |+++.++||+ ++++| +|++++ .++ ++.+........ . +
T Consensus 220 ~~~-----~~~~~~~~~~-~~~~~i~~~s~sK~-~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~-~----------~ 281 (406)
T 1xi9_A 220 TYE-----GEHISPGSLT-KDVPVIVMNGLSKV-YFATGWRLGYMYFVDPENKLSEVREAIDRLARI-R----------L 281 (406)
T ss_dssp BSS-----SCCCCHHHHC-SSSCEEEEEESTTT-TCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHH-T----------C
T ss_pred ccC-----CCCCCHHHcC-CCceEEEEeccccc-cCCCccEEEEEEEecCchhHHHHHHHHHHHHHh-h----------c
Confidence 430 0000001111 456 8889999999 45555 898773 344 433221111000 0 1
Q ss_pred CCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 388 SRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 388 sr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+.+....+++.++++ .+.+++++..++..++++++.+.|+++|++++
T Consensus 282 ~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 328 (406)
T 1xi9_A 282 CPNTPAQFAAIAGLT-GPMDYLKEYMKKLKERRDYIYKRLNEIPGIST 328 (406)
T ss_dssp CSCSHHHHHHHHHHH-SCCHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred CCCHHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence 111112233334443 24456788889999999999999998887764
No 63
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.87 E-value=2.4e-21 Score=194.15 Aligned_cols=237 Identities=14% Similarity=0.087 Sum_probs=176.2
Q ss_pred chhHHHHHHHHHHHHHHHhCCCC---CCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKE---KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~---~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a 242 (438)
.++..++.+++.+++++++|.+. ++ + ++|+|||+|+..+++++. .+| ++|+++.+.|.++..+
T Consensus 77 ~~g~~~l~~~l~~~l~~~~g~~~~~~~~----i--~~~~g~~~a~~~~~~~l~-----~~g---d~vl~~~~~~~~~~~~ 142 (407)
T 3nra_A 77 YRGDLGIRDLLAPRLAAFTGAPVDARDG----L--IITPGTQGALFLAVAATV-----ARG---DKVAIVQPDYFANRKL 142 (407)
T ss_dssp TTCCHHHHHHHHHHHHHHHTSCCCTTTS----E--EEESHHHHHHHHHHHTTC-----CTT---CEEEEEESCCTHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCc----E--EEeCCcHHHHHHHHHHhC-----CCC---CEEEEcCCcccchHHH
Confidence 44567888899999999999852 33 5 899999999999998875 366 8999999999999999
Q ss_pred HhhcCcEEEEeeC------CCCCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEecccc
Q 013675 243 AQYFNIKLWRVPV------DKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 243 ~~~~Gi~v~~v~~------~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~g 313 (438)
++..|.+++.+|+ +.++.+|+++|++++++++++|++++|+||||.+.| +++|+++|++||+++++|++|+
T Consensus 143 ~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~ 222 (407)
T 3nra_A 143 VEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYS 222 (407)
T ss_dssp HHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred HHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 9999999999998 367889999999999999999999999999999988 9999999999999999999998
Q ss_pred chhhhhhhhcCCCCCCCcc---CCCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCC
Q 013675 314 GFVLPFAKKLGYPIPPFDF---SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSR 389 (438)
Q Consensus 314 g~~~pf~~~~g~~~p~~~~---~~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr 389 (438)
++... |...+.+.. ...+.+++..+++|.+. .+.++|+++.+ +++..........+..+
T Consensus 223 ~~~~~-----g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~----------- 285 (407)
T 3nra_A 223 RLRYA-----GASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS-RAIIARMEKLQAIVSLR----------- 285 (407)
T ss_dssp TSBCT-----TCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC-HHHHHHHHHHHHHHTSS-----------
T ss_pred ccccC-----CCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC-HHHHHHHHHHHhhhccC-----------
Confidence 76531 110111211 12446788999999953 33557887764 44332211111111100
Q ss_pred CCchHHHHHHHHHHH--cHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 390 PGGLIAGAWAALMSL--GQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 390 ~~~~ia~~~aal~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.. ..++.++...+ +.+.+++..++..++++++.+.|+++|++++
T Consensus 286 ~~--~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 331 (407)
T 3nra_A 286 AA--GYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFA 331 (407)
T ss_dssp SC--HHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBC
T ss_pred CC--hHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 00 11333333333 3356788888899999999999999888765
No 64
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.87 E-value=2e-21 Score=196.26 Aligned_cols=237 Identities=18% Similarity=0.159 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHHHHhCC--CCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcC
Q 013675 170 ARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFN 247 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~--~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~G 247 (438)
.++++++++++++.+|+ ++++ + ++|+|+++|+..+++++. ++| ++|+++.+.|.++..++...|
T Consensus 99 ~~l~~~l~~~l~~~~g~~~~~~~----v--~~~~g~~ea~~~a~~~~~-----~~g---d~Vi~~~~~y~~~~~~~~~~g 164 (421)
T 3l8a_A 99 DDLYQAVIDWERKEHDYAVVKED----I--LFIDGVVPAISIALQAFS-----EKG---DAVLINSPVYYPFARTIRLND 164 (421)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGG----E--EEESCHHHHHHHHHHHHS-----CTE---EEEEEEESCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCCCCHHH----E--EEcCCHHHHHHHHHHHhc-----CCC---CEEEECCCCcHHHHHHHHHCC
Confidence 67888999999999994 4443 6 899999999999999975 356 899999999999999999999
Q ss_pred cEEEEeeCC-C--CCccCHHHHHHhhc-cCcEEEEEecCCCCCccc---cCHHHHHHHHHHcCCeEEEeccccchhhhhh
Q 013675 248 IKLWRVPVD-K--EFRADVKAIKKYIN-RNTVLIVGSAPGFPHGII---DPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (438)
Q Consensus 248 i~v~~v~~~-~--~~~~d~~~Le~~I~-~~t~~vv~~~~~~~tG~i---ddi~~I~~la~~~~i~lhVD~a~gg~~~pf~ 320 (438)
.+++.+|++ + ++.+|+++|+++++ ++|++|++++|+||+|.+ +++++|+++|++||+++++|++|+++...
T Consensus 165 ~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~-- 242 (421)
T 3l8a_A 165 HRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALF-- 242 (421)
T ss_dssp EEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT--
T ss_pred CEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccC--
Confidence 999999986 2 45799999999998 789999999999999999 67999999999999999999999876541
Q ss_pred hhcCCC-CC--CCccCCCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHH
Q 013675 321 KKLGYP-IP--PFDFSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAG 396 (438)
Q Consensus 321 ~~~g~~-~p--~~~~~~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~ 396 (438)
|.. .+ .++....+.+++..+++|++. ++.++|+++.+++++..........+. .++-+....++
T Consensus 243 ---g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~---------~~~~n~~~~~a 310 (421)
T 3l8a_A 243 ---GNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANN---------QHEVPTVGMIA 310 (421)
T ss_dssp ---TCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTT---------CSCCCHHHHHH
T ss_pred ---CCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhcc---------cCCCCHHHHHH
Confidence 110 11 111122356788899999953 445679988876655432211110110 00111112334
Q ss_pred HHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 397 AWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 397 ~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+.+++. .+.+.+++..++..++++++.+.|+++|++++
T Consensus 311 ~~aal~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~ 348 (421)
T 3l8a_A 311 TQAAFQ-YGKPWLEELKTVIEGNIKLVIKELEAKTKIKV 348 (421)
T ss_dssp HHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEE
T ss_pred HHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 455554 35677888999999999999999988777654
No 65
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.87 E-value=1.2e-20 Score=186.97 Aligned_cols=234 Identities=15% Similarity=0.133 Sum_probs=170.3
Q ss_pred cccchhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHH
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD 240 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~ 240 (438)
+...++..++++++.+++.+.+|.+ +++ + ++|+|||+|+.++++++. ++| ++|+++.++|+++.
T Consensus 62 y~~~~~~~~l~~~la~~~~~~~g~~~~~~~----v--~~~~g~~~a~~~~~~~~~-----~~g---d~vl~~~p~~~~~~ 127 (370)
T 2z61_A 62 YTDSRGILELREKISELYKDKYKADIIPDN----I--IITGGSSLGLFFALSSII-----DDG---DEVLIQNPCYPCYK 127 (370)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHSSCCCCGGG----E--EEESSHHHHHHHHHHHHC-----CTT---CEEEEESSCCTHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCChhh----E--EECCChHHHHHHHHHHhc-----CCC---CEEEEeCCCchhHH
Confidence 4334556788888888888877754 343 5 899999999999999875 366 89999999999999
Q ss_pred HHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhh
Q 013675 241 KAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (438)
Q Consensus 241 ~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~ 320 (438)
..++..|++++.+| +|+++|++++++++++|++++|+||+|.+.|.+ |.++|++||+++++|++|+.+...
T Consensus 128 ~~~~~~g~~~~~v~------~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~-- 198 (370)
T 2z61_A 128 NFIRFLGAKPVFCD------FTVESLEEALSDKTKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYE-- 198 (370)
T ss_dssp HHHHHTTCEEEEEC------SSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSS--
T ss_pred HHHHHcCCEEEEeC------CCHHHHHHhcccCceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccC--
Confidence 99999999999988 689999999998999999999999999999999 999999999999999999876531
Q ss_pred hhcCCCCCCCcc-CCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHH
Q 013675 321 KKLGYPIPPFDF-SVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGA 397 (438)
Q Consensus 321 ~~~g~~~p~~~~-~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~ 397 (438)
|...+..++ ...+.|++..++||+ ++++| +|+++.++ ++.+........+.. +-+....+++
T Consensus 199 ---g~~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~~a~ 263 (370)
T 2z61_A 199 ---GKCYSAIEFDENLEKTILINGFSKL-YAMTGWRIGYVISND-EIIEAILKLQQNLFI----------SAPTISQYAA 263 (370)
T ss_dssp ---SCCCCGGGTCTTCSSEEEEEESTTT-TTCGGGCCEEEECCH-HHHHHHHHHHHHHTS----------SSCHHHHHHH
T ss_pred ---CCCcCHHHccCCCCcEEEEecChhc-cCCccceEEEEEECH-HHHHHHHHHHhhccc----------CCCHHHHHHH
Confidence 110111122 134679999999999 46555 89887765 433221111111110 1111112222
Q ss_pred HHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 398 WAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 398 ~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.++++.++.+.+++..++..++++++.+.|+++ |+++
T Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 300 (370)
T 2z61_A 264 LKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEV 300 (370)
T ss_dssp GGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBC
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence 233332245677888889999999999999886 5543
No 66
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.86 E-value=5.2e-21 Score=192.45 Aligned_cols=239 Identities=17% Similarity=0.145 Sum_probs=176.8
Q ss_pred cccchhHHHHHHHHHHHHHHHhCCC--CC-CCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcH
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGNK--EK-ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY 239 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~~--~~-~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~ 239 (438)
|...++..++++++.+++.+.+|.+ ++ + + ++|+|||+|+.++++++. .+| ++|+++.++|+++
T Consensus 58 y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~----v--~~t~g~~~al~~~~~~~~-----~~g---d~Vl~~~~~y~~~ 123 (411)
T 2o0r_A 58 YPPGPGSAPLRRAIAAQRRRHFGVDYDPETE----V--LVTVGATEAIAAAVLGLV-----EPG---SEVLLIEPFYDSY 123 (411)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCTTTS----E--EEEEHHHHHHHHHHHHHC-----CTT---CEEEEEESCCTTH
T ss_pred CCCCCCCHHHHHHHHHHHHHHcCCCCCCCce----E--EEeCCHHHHHHHHHHHhc-----CCC---CEEEEeCCCcHhH
Confidence 4334556788999999999888864 43 4 6 899999999999999875 367 8999999999999
Q ss_pred HHHHhhcCcEEEEeeCCC---CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEecccc
Q 013675 240 DKAAQYFNIKLWRVPVDK---EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 240 ~~a~~~~Gi~v~~v~~~~---~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~g 313 (438)
..+++..|++++.+|+++ ++.+|+++|++++++++++|++++|+||+|.+.| +++|+++|++||+++++|++|+
T Consensus 124 ~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 203 (411)
T 2o0r_A 124 SPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYE 203 (411)
T ss_dssp HHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 999999999999999875 3679999999999989999999999999999976 5899999999999999999998
Q ss_pred chhhhhhhhcCCCCCCC-ccC-CCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCC
Q 013675 314 GFVLPFAKKLGYPIPPF-DFS-VQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSR 389 (438)
Q Consensus 314 g~~~pf~~~~g~~~p~~-~~~-~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr 389 (438)
++... |...+++ .+. ..+.|+++.++||+ ++++| +|+++.+ +++.+.......... .+.
T Consensus 204 ~~~~~-----g~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~----------~~~ 266 (411)
T 2o0r_A 204 HLVFD-----HARHLPLAGFDGMAERTITISSAAKM-FNCTGWKIGWACGP-AELIAGVRAAKQYLS----------YVG 266 (411)
T ss_dssp TCBCT-----TCCCCCGGGSTTTGGGEEEEEEHHHH-TTCTTTCEEEEECC-HHHHHHHHHHHHHHT----------SCC
T ss_pred ccccC-----CCCCcChhhccCCCCCEEEEeechhh-cCCccceEEEEeeC-HHHHHHHHHHHhhcc----------CCC
Confidence 76531 1101112 111 24679999999998 56666 8998775 444332111100000 011
Q ss_pred CCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 390 PGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 390 ~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
+....+++.++++. +.+++++..++..++++++.+.|++. +++
T Consensus 267 ~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 309 (411)
T 2o0r_A 267 GAPFQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTEI-GFA 309 (411)
T ss_dssp CTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH-TCE
T ss_pred ChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHc-CCE
Confidence 11223345555543 46778888899999999999999875 444
No 67
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.86 E-value=6.5e-21 Score=189.60 Aligned_cols=226 Identities=21% Similarity=0.211 Sum_probs=167.4
Q ss_pred HHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEee
Q 013675 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (438)
Q Consensus 175 ~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~ 254 (438)
++++.++++++.++++ + ++|+|||+|+.++++++. .+| ++|+++.++|.++..+++..|++++.+|
T Consensus 65 ~l~~~la~~~~~~~~~----v--~~~~g~~~a~~~~~~~~~-----~~g---d~Vl~~~~~~~~~~~~~~~~g~~~~~v~ 130 (381)
T 1v2d_A 65 ALREALAEEFAVEPES----V--VVTSGATEALYVLLQSLV-----GPG---DEVVVLEPFFDVYLPDAFLAGAKARLVR 130 (381)
T ss_dssp HHHHHHHHHHTSCGGG----E--EEESSHHHHHHHHHHHHC-----CTT---CEEEEEESCCTTHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCChhh----E--EEcCChHHHHHHHHHHhC-----CCC---CEEEEcCCCchhHHHHHHHcCCEEEEEe
Confidence 4555677889987665 5 999999999999999875 366 8999999999999999999999999999
Q ss_pred CC---CCCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCC
Q 013675 255 VD---KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIP 328 (438)
Q Consensus 255 ~~---~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p 328 (438)
++ +++.+|+++|++++++++++|++++|+||||.+.| +++|+++|++||+++|+|++|+++.. |...+
T Consensus 131 ~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~------g~~~~ 204 (381)
T 1v2d_A 131 LDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY------GERPR 204 (381)
T ss_dssp CEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS------SSCCC
T ss_pred CCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc------CCCCC
Confidence 97 56889999999999989999999999999999976 89999999999999999999986642 11000
Q ss_pred CC-ccCCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHc
Q 013675 329 PF-DFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG 405 (438)
Q Consensus 329 ~~-~~~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g 405 (438)
.+ .. ..++|+++.++||+ ++++| +|+++.++ ++.+....... +. ..+.+....+++.+++....
T Consensus 205 ~~~~~-~~~~~~~~~s~sK~-~~~~G~r~G~~~~~~-~~~~~~~~~~~-~~---------~~~~~~~~~~a~~~~l~~~~ 271 (381)
T 1v2d_A 205 RLREF-APERTFTVGSAGKR-LEATGYRVGWIVGPK-EFMPRLAGMRQ-WT---------SFSAPTPLQAGVAEALKLAR 271 (381)
T ss_dssp CHHHH-CTTTEEEEEEHHHH-TTCGGGCCEEEECCT-TTHHHHHHHHH-HH---------TSSCCHHHHHHHHHHHHHHH
T ss_pred CHHHh-cCCCEEEEeechhh-cCCcccceEEEEeCH-HHHHHHHHHHh-hc---------ccCCCcHHHHHHHHHHhCcc
Confidence 11 11 45789999999998 45555 89987754 33322111000 00 00111112233444444221
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 406 -QEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 406 -~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
.+++++..++..++++++.+.|++. +++
T Consensus 272 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 300 (381)
T 1v2d_A 272 REGFYEALREGYRRRRDLLAGGLRAM-GLR 300 (381)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence 4567888899999999999999884 554
No 68
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.86 E-value=1.3e-20 Score=188.48 Aligned_cols=237 Identities=16% Similarity=0.103 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHHHHHhC--CCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhc
Q 013675 169 VARFEAEVIAMTAALLG--NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF 246 (438)
Q Consensus 169 ~~~~e~~~~~~~a~l~g--~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~ 246 (438)
..++++.+.+++.+.+| .++++ + ++|+|||+|+.++++++. .+| ++|+++.++|.++..+++..
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~----v--~~t~g~~~a~~~~~~~l~-----~~g---d~vl~~~p~~~~~~~~~~~~ 133 (399)
T 1c7n_A 68 TEEYKKTVKKWMKDRHQWDIQTDW----I--INTAGVVPAVFNAVREFT-----KPG---DGVIIITPVYYPFFMAIKNQ 133 (399)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGG----E--EEESSHHHHHHHHHHHHC-----CTT---CEEEECSSCCTHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHhCCCCChhh----E--EEcCCHHHHHHHHHHHhc-----CCC---CEEEEcCCCcHhHHHHHHHc
Confidence 56788888888888888 44444 6 899999999999999875 256 89999999999999999999
Q ss_pred CcEEEEeeCC-CC--CccCHHHHHHhhc-cCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccchhhhh
Q 013675 247 NIKLWRVPVD-KE--FRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPF 319 (438)
Q Consensus 247 Gi~v~~v~~~-~~--~~~d~~~Le~~I~-~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg~~~pf 319 (438)
|++++.+|++ ++ +.+|+++|+++++ +++++|++++|+||||.+.| +++|+++|++||+++++|++|+++...
T Consensus 134 g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~- 212 (399)
T 1c7n_A 134 ERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMP- 212 (399)
T ss_dssp TCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCT-
T ss_pred CCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccC-
Confidence 9999999986 33 4699999999998 68999999999999999988 999999999999999999999876531
Q ss_pred hhhcCCCCCCCccCC---CCccEEEeCCCCCCCCCC--CcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchH
Q 013675 320 AKKLGYPIPPFDFSV---QGVTSISVDVHKYGLAPK--GTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLI 394 (438)
Q Consensus 320 ~~~~g~~~p~~~~~~---~gvdsis~s~hK~~~~p~--g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~i 394 (438)
|...+++.... .+.+++..+++|++ +++ .+|+++.+++++..........|. .++.+....
T Consensus 213 ----g~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~l~~~~~~~~---------~~~~~~~~~ 278 (399)
T 1c7n_A 213 ----GYEHTVFQSIDEQLADKTITFTAPSKTF-NIAGMGMSNIIIKNPDIRERFTKSRDATS---------GMPFTTLGY 278 (399)
T ss_dssp ----TCCCCCGGGSCHHHHTTEEEEECSHHHH-TCGGGCCEEEECCCHHHHHHHHHHHHHTT---------CCCCCHHHH
T ss_pred ----CCCcccHHHcCccccCcEEEEEeChhhc-cccchheEEEEECCHHHHHHHHHHHhhcc---------cCCCCHHHH
Confidence 11011121111 24568888999994 433 479988876544432211111111 001111112
Q ss_pred HHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhc-CCCccc
Q 013675 395 AGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVL-FPMFLP 435 (438)
Q Consensus 395 a~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~ 435 (438)
+++.+++. .+.+.+++..++..++++++.+.|++ +|++++
T Consensus 279 ~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 319 (399)
T 1c7n_A 279 KACEICYK-ECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKA 319 (399)
T ss_dssp HHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBC
T ss_pred HHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 23333443 24567888888999999999999998 888764
No 69
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.86 E-value=3e-21 Score=189.60 Aligned_cols=231 Identities=16% Similarity=0.191 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH--Hhhc-
Q 013675 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA--AQYF- 246 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a--~~~~- 246 (438)
.....++++++++++| ++.+ + ++|+|||+|+.+++++++. +| ++|+++.+.|++...+ +...
T Consensus 42 ~~~~~~l~~~la~~~g-~~~~----v--~~~~~gt~a~~~al~~~~~-----~g---d~vi~~~~~~~~~~~~~~~~~~~ 106 (356)
T 1v72_A 42 DELTAQVKRKFCEIFE-RDVE----V--FLVPTGTAANALCLSAMTP-----PW---GNIYCHPASHINNDECGAPEFFS 106 (356)
T ss_dssp SHHHHHHHHHHHHHHT-SCCE----E--EEESCHHHHHHHHHHTSCC-----TT---EEEEECTTSHHHHSSTTHHHHHT
T ss_pred chHHHHHHHHHHHHhC-CCCc----E--EEeCCccHHHHHHHHHhcC-----CC---CEEEEcCccchhhhhchHHHHHh
Confidence 3566788889999999 4332 4 8999999999999998753 56 8999999999988766 7777
Q ss_pred -CcEEEEeeCCCCCccCHHHHHH-hhcc-------CcEEEEEecCCCCCcc---ccCHHHHHHHHHHcCCeEEEeccccc
Q 013675 247 -NIKLWRVPVDKEFRADVKAIKK-YINR-------NTVLIVGSAPGFPHGI---IDPIQELGELALSHGTCLHVDLCLGG 314 (438)
Q Consensus 247 -Gi~v~~v~~~~~~~~d~~~Le~-~I~~-------~t~~vv~~~~~~~tG~---iddi~~I~~la~~~~i~lhVD~a~gg 314 (438)
|++++.+|.+ ++.+|+++|++ ++++ +|++|++++|++ +|. .+++++|+++|++||+++|+|++|+.
T Consensus 107 ~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~ 184 (356)
T 1v72_A 107 NGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFA 184 (356)
T ss_dssp TSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHH
T ss_pred CCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhH
Confidence 9999999986 57899999999 9986 689999999876 999 56689999999999999999999976
Q ss_pred hhhhhhhhcCCCCCCCccC-CCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCch
Q 013675 315 FVLPFAKKLGYPIPPFDFS-VQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGL 393 (438)
Q Consensus 315 ~~~pf~~~~g~~~p~~~~~-~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ 393 (438)
+...+ .+. ++.... ..++|++++++||+ ++|.|+|+++. ++++......... ..+ .-....
T Consensus 185 ~~~~~---~~~--~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~-~~~~~~~~~~~~~-~~~----------~~~~~~ 246 (356)
T 1v72_A 185 NALVS---LGC--SPAEMTWKAGVDALSFGATKN-GVLAAEAIVLF-NTSLATEMSYRRK-RAG----------HLSSKM 246 (356)
T ss_dssp HHHHH---HTC--CTTTTTGGGTCCEEEECCGGG-TCSSCEEEEES-SGGGHHHHHHHHH-HTT----------CCCSST
T ss_pred hHhcc---CCC--CHHHhhhhhcCCEEEEecccC-CCcCccEEEEE-CHHHHhhHHHHhh-ccC----------chhhhH
Confidence 54321 121 111111 13678999999999 56888888766 4444332111100 011 001111
Q ss_pred HHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 394 IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 394 ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
..++..++..+..+.+.+..++..++++++.+.|++++|+++
T Consensus 247 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 288 (356)
T 1v72_A 247 RFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEV 288 (356)
T ss_dssp HHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 223344455555455677788889999999999998888765
No 70
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.86 E-value=8.4e-21 Score=190.25 Aligned_cols=214 Identities=18% Similarity=0.172 Sum_probs=162.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHH----hhcC
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA----QYFN 247 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~----~~~G 247 (438)
...++++.+++++|.+. + ++++|||+|+.++++++. ++| ++|+++.+.|.+....+ ...|
T Consensus 67 ~~~~l~~~la~~~g~~~------~--~~~~sGt~A~~~al~~~~-----~~g---d~Vi~~~~~y~~~~~~~~~~~~~~g 130 (392)
T 3qhx_A 67 TRTALEAALAAVEDAAF------G--RAFSSGMAAADCALRAML-----RPG---DHVVIPDDAYGGTFRLIDKVFTGWN 130 (392)
T ss_dssp HHHHHHHHHHHHTTCSE------E--EEESSHHHHHHHHHHHHC-----CTT---CEEEEETTCCHHHHHHHHHTGGGGT
T ss_pred HHHHHHHHHHHHhCCCc------E--EEECCHHHHHHHHHHHHh-----CCC---CEEEEeCCCcchHHHHHHHHHHhcC
Confidence 34566678999998862 3 889999999999999874 366 89999999998876665 6679
Q ss_pred cEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCC
Q 013675 248 IKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPI 327 (438)
Q Consensus 248 i~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~ 327 (438)
++++.+|++ |+++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++|+|++|+.+..
T Consensus 131 ~~~~~v~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~---------- 195 (392)
T 3qhx_A 131 VEYTPVALA-----DLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPAL---------- 195 (392)
T ss_dssp CEEEEECTT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT----------
T ss_pred cEEEEeCCC-----CHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCccccc----------
Confidence 999999876 89999999999999999999999999999999999999999999999999874421
Q ss_pred CCCccCCCCccEEEeCCCCCCCCCCC---cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHH
Q 013675 328 PPFDFSVQGVTSISVDVHKYGLAPKG---TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL 404 (438)
Q Consensus 328 p~~~~~~~gvdsis~s~hK~~~~p~g---~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~ 404 (438)
.+....++|+++.|+||++ ++.| .|+++.+++++.......... .|..... ..+|++++.+
T Consensus 196 --~~~~~~~~di~~~S~sK~l-g~~g~~~~G~v~~~~~~~~~~l~~~~~~-----------~g~~~~~--~~~~~~~~~l 259 (392)
T 3qhx_A 196 --QQPLSLGADVVLHSTTKYI-GGHSDVVGGALVTNDEELDQSFAFLQNG-----------AGAVPGP--FDAYLTMRGL 259 (392)
T ss_dssp --CCGGGGTCSEEEEETTTTT-TCSSCCCCEEEEESCHHHHHHHHHHHHH-----------HCCCCCH--HHHHHHHHHH
T ss_pred --CChHHhCCcEEEEcCcccc-CCCCCceEEEEEECcHHHHHHHHHHHHh-----------cCCCCCH--HHHHHHHhhh
Confidence 1122347899999999995 5544 788777755543321111100 1122222 2566666433
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 405 GQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 405 g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
+.+....++..++++++.+.|++.|.+.
T Consensus 260 --~~l~~~~~~~~~~~~~l~~~L~~~~~v~ 287 (392)
T 3qhx_A 260 --KTLVLRMQRHSENAAAVAEFLAEHPAIS 287 (392)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred --hHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4456777888899999999999887764
No 71
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.86 E-value=1.3e-20 Score=187.88 Aligned_cols=231 Identities=19% Similarity=0.142 Sum_probs=159.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEe
Q 013675 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v 253 (438)
.++++.+++++|.+ .. +++++||+|+.+++++++. ++| ++|+++.++|+++..+++..|++++.+
T Consensus 41 ~~l~~~la~~~~~~-~~-------i~~~sGt~al~~~l~~l~~----~~g---d~Vi~~~~~~~~~~~~~~~~g~~~~~v 105 (388)
T 1b9h_A 41 NSFEREFAAHHGAA-HA-------LAVTNGTHALELALQVMGV----GPG---TEVIVPAFTFISSSQAAQRLGAVTVPV 105 (388)
T ss_dssp HHHHHHHHHHTTCS-EE-------EEESCHHHHHHHHHHHTTC----CTT---CEEEEESSSCTHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCC-eE-------EEeCCHHHHHHHHHHHcCC----CCc---CEEEECCCccHHHHHHHHHcCCEEEEE
Confidence 34555688888886 32 4555569999999998721 356 899999999999999999999999999
Q ss_pred eCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCcc
Q 013675 254 PVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDF 332 (438)
Q Consensus 254 ~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~ 332 (438)
|+++ ++.+|+++|+++|+++|++|+ |+|++|.+.|+++|.++|++||+++|+|++++.+..+ .| .++
T Consensus 106 ~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~----~~-----~~~ 173 (388)
T 1b9h_A 106 DVDAATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARW----QG-----KRV 173 (388)
T ss_dssp CBCTTTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEE----TT-----EEG
T ss_pred ecCCCcCCCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCcc----CC-----eec
Confidence 9987 589999999999998898877 8889999999999999999999999999999754331 01 112
Q ss_pred CCCC-ccEEEeCCCCCCCCCCCcEEEEEecccc--cccchhccc-ccCC--CccCCCCccCCCCCchHHHHHHHHHHHcH
Q 013675 333 SVQG-VTSISVDVHKYGLAPKGTSVVLYRNREI--RKHQFVAVT-EWSG--GLYVSPTVAGSRPGGLIAGAWAALMSLGQ 406 (438)
Q Consensus 333 ~~~g-vdsis~s~hK~~~~p~g~g~l~~r~~~~--~~~~~~~~~-~~~g--~~~~~~~~~gsr~~~~ia~~~aal~~~g~ 406 (438)
...+ +++.+++.||++.++ ..|+++.+++.+ ......... .+.. ..+. ....|+........+++.+. ..
T Consensus 174 ~~~~~i~~~S~s~~K~l~g~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~a~~~~--~~ 249 (388)
T 1b9h_A 174 GELDSIATFSFQNGKLMTAG-EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYF-HKIAGSNMRLNEFSASVLRA--QL 249 (388)
T ss_dssp GGSSSCEEEECCTTSSSCSS-SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCC-CCSCCCBCBCBHHHHHHHHH--HH
T ss_pred ccccceEEEEccCCCcccCC-CeEEEEECCHHHHHHHHHHHHHhCCCCccCccce-eecccccCCcCHHHHHHHHH--HH
Confidence 2223 788889999996555 468877776544 222111110 0000 0000 00112211111112333222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 407 EGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 407 ~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+.+++..++..++++++.+.|+++|++++
T Consensus 250 ~~l~~~~~~~~~~~~~l~~~L~~~~~~~~ 278 (388)
T 1b9h_A 250 ARLDEQIAVRDERWTLLSRLLGAIDGVVP 278 (388)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTSTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 45677888888999999999999888764
No 72
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.86 E-value=5.4e-21 Score=189.80 Aligned_cols=238 Identities=12% Similarity=0.071 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHHHHhC--CCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhc
Q 013675 169 VARFEAEVIAMTAALLG--NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF 246 (438)
Q Consensus 169 ~~~~e~~~~~~~a~l~g--~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~ 246 (438)
..++++++.+++++.+| .++++ + ++|+|||+|+.++++++. ++| ++|+++.++|.++...++..
T Consensus 61 ~~~~~~~l~~~l~~~~g~~~~~~~----v--~~~~g~~~a~~~~~~~l~-----~~g---d~vl~~~~~~~~~~~~~~~~ 126 (383)
T 3kax_A 61 PENIGDIICNWTKKQYNWDIQKEW----I--VFSAGIVPALSTSIQAFT-----KEN---ESVLVQPPIYPPFFEMVTTN 126 (383)
T ss_dssp CTTHHHHHHHHHHHHHCCCCCGGG----E--EEESCHHHHHHHHHHHHC-----CTT---CEEEECSSCCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhCCCCChhh----E--EEcCCHHHHHHHHHHHhC-----CCC---CEEEEcCCCcHHHHHHHHHc
Confidence 45678889999999999 44554 6 899999999999999875 367 89999999999999999999
Q ss_pred CcEEEEeeCCC---CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccchhhhhh
Q 013675 247 NIKLWRVPVDK---EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFA 320 (438)
Q Consensus 247 Gi~v~~v~~~~---~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg~~~pf~ 320 (438)
|.+++.+|+++ ++.+|+++|++++++++++|++++|+||+|.+.| +++|+++|++||+++++|++|+++...
T Consensus 127 g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-- 204 (383)
T 3kax_A 127 NRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYA-- 204 (383)
T ss_dssp TCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT--
T ss_pred CCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccC--
Confidence 99999999874 3569999999999889999999999999999977 556677799999999999999865531
Q ss_pred hhcCCCCCCCccCC---CCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHH
Q 013675 321 KKLGYPIPPFDFSV---QGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAG 396 (438)
Q Consensus 321 ~~~g~~~p~~~~~~---~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~ 396 (438)
|....++.... .+.++++.++||.+. .+.++|+++.+++++..........+.. ++-+....++
T Consensus 205 ---g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~a 272 (383)
T 3kax_A 205 ---DHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQGF---------HGLNIFAYTA 272 (383)
T ss_dssp ---TCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTC---------CCCCHHHHHH
T ss_pred ---CCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhccc---------CCCCHHHHHH
Confidence 11000111111 245688899999943 4445788777555544322111111100 0111111223
Q ss_pred HHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhc-CCCccc
Q 013675 397 AWAALMSLGQEGYLENTKAIMEVSESIQKGLVL-FPMFLP 435 (438)
Q Consensus 397 ~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~ 435 (438)
+.+++.. +.+.+++..++..++++++.+.|++ +|++++
T Consensus 273 ~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 311 (383)
T 3kax_A 273 MQSAYTE-CNDWLNEIRFYIEDNAKFACEYIKDHIPTLSV 311 (383)
T ss_dssp HHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCceE
Confidence 3333322 4566788889999999999999987 788764
No 73
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.86 E-value=5.1e-21 Score=189.67 Aligned_cols=229 Identities=15% Similarity=0.031 Sum_probs=163.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEe
Q 013675 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v 253 (438)
.++++.+++++|.+ . + ++|+|||+|+.+++++++. ++| ++|+++.++|+++..+++..|++++.+
T Consensus 41 ~~l~~~la~~~~~~--~----~--~~~~~gt~a~~~~~~~~~~----~~g---d~v~~~~~~~~~~~~~~~~~g~~~~~~ 105 (374)
T 3uwc_A 41 EKFEKRFAALHNAP--H----A--IGVGTGTDALAMSFKMLNI----GAG---DEVITCANTFIASVGAIVQAGATPVLV 105 (374)
T ss_dssp HHHHHHHHHHTTCS--E----E--EEESCHHHHHHHHHHHTTC----CTT---CEEEEESSSCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCC--c----E--EEeCCHHHHHHHHHHHcCC----CCC---CEEEECCCccHHHHHHHHHcCCEEEEE
Confidence 34555788888876 2 3 8999999999999988721 356 899999999999999999999999999
Q ss_pred eCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccC
Q 013675 254 PVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS 333 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~ 333 (438)
|+++++.+|++++++++++++++|+ ++||+|.+.|+++|.++|+++|+++|+|++|+.+.. + +..
T Consensus 106 ~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~-~-----------~~~ 170 (374)
T 3uwc_A 106 DSENGYVIDPEKIEAAITDKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGR-I-----------NDK 170 (374)
T ss_dssp CBCTTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCE-E-----------TTE
T ss_pred ecCCCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCce-e-----------CCe
Confidence 9988899999999999999998887 788999999999999999999999999999875432 1 111
Q ss_pred CCC--ccEEEeCCC--CCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHHHH
Q 013675 334 VQG--VTSISVDVH--KYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGY 409 (438)
Q Consensus 334 ~~g--vdsis~s~h--K~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g~ 409 (438)
..+ .|+++.++| |++.++...|+++.+++++.+.............+. ....|..... .++.+++.....+++
T Consensus 171 ~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~aa~~~~~~~~~ 247 (374)
T 3uwc_A 171 FVGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLINRDV-CVEYGINCRM--DTIQAVIANRLMNQL 247 (374)
T ss_dssp ETTSSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETTE-ESSCCCBCBC--CHHHHHHHHHHGGGH
T ss_pred eccccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCccccCc-cccccccCCC--CHHHHHHHHHHHHHH
Confidence 112 489999977 995442346776666655433211111100000000 0001111111 133444444445677
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCC-ccc
Q 013675 410 LENTKAIMEVSESIQKGLVLFPM-FLP 435 (438)
Q Consensus 410 ~~~~~~~~~~a~~l~~~L~~~~g-~~~ 435 (438)
++..++..++++++.+.|+++++ +++
T Consensus 248 ~~~~~~~~~~~~~l~~~l~~~~~~~~~ 274 (374)
T 3uwc_A 248 ETITEKRRGIAHLYDQSFVDLSEFIDV 274 (374)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTTTEEC
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeEEe
Confidence 88889999999999999999877 654
No 74
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.86 E-value=1.5e-20 Score=189.12 Aligned_cols=238 Identities=21% Similarity=0.180 Sum_probs=174.2
Q ss_pred CcccchhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcH
Q 013675 162 HLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY 239 (438)
Q Consensus 162 ~~~~~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~ 239 (438)
.+...++..++++++.+++.+.+|.+ +++ + ++|+|||+|+.++++++. ++| ++|+++.++|+++
T Consensus 74 ~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~----v--~~~~g~t~a~~~~~~~~~-----~~g---d~Vl~~~~~~~~~ 139 (409)
T 2gb3_A 74 YYSHSAGIWELREAFASYYKRRQRVDVKPEN----V--LVTNGGSEAILFSFAVIA-----NPG---DEILVLEPFYANY 139 (409)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHTSCCCCCGGG----E--EEESHHHHHHHHHHHHHC-----CTT---CEEEEEESCCTHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhCCCCCHHH----E--EEeCCHHHHHHHHHHHhC-----CCC---CEEEEcCCCchhH
Confidence 34444566788888888888877754 333 5 899999999999999874 366 8999999999999
Q ss_pred HHHHhhcCcEEEEeeCCC--CCccCHHHHHHhhccCcEEEEEecCCCCCcccc---CHHHHHHHHHHcCCeEEEeccccc
Q 013675 240 DKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIID---PIQELGELALSHGTCLHVDLCLGG 314 (438)
Q Consensus 240 ~~a~~~~Gi~v~~v~~~~--~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~id---di~~I~~la~~~~i~lhVD~a~gg 314 (438)
..+++..|++++.+|+++ ++.+ +++|++++++++++|++++|+||+|.+. ++++|+++|+++|+++++|++|++
T Consensus 140 ~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~ 218 (409)
T 2gb3_A 140 NAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSE 218 (409)
T ss_dssp HHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred HHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccc
Confidence 999999999999999985 4555 8999999998999999999999999985 489999999999999999999987
Q ss_pred hhhhhhhhcCCCCCCCccC-CCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCC
Q 013675 315 FVLPFAKKLGYPIPPFDFS-VQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG 391 (438)
Q Consensus 315 ~~~pf~~~~g~~~p~~~~~-~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~ 391 (438)
+... +... ++ +. ..+.|+++.++||++ ++.| +|+++.+++++.+........|. +.+.
T Consensus 219 ~~~~-----~~~~-~~-~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~l~~~l~~~~~~~~-----------~~~~ 279 (409)
T 2gb3_A 219 IVFR-----GEFA-SA-LSIESDKVVVIDSVSKKF-SACGARVGCLITRNEELISHAMKLAQGRL-----------APPL 279 (409)
T ss_dssp CBCS-----SCCC-CG-GGSCCTTEEEEEESTTTT-TCGGGCCEEEECSCHHHHHHHHHHHHHSC-----------CCCH
T ss_pred cccC-----CCCC-Cc-cccCCCCEEEEecchhcc-CCccceEEEEEECcHHHHHHHHHHHhccC-----------CCCH
Confidence 6531 1001 11 11 246799999999994 5555 89988776344332111111110 0111
Q ss_pred chHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 392 GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 392 ~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
...+++.++++. +.+++++..++..++++++.+.|+++ ++++
T Consensus 280 ~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 321 (409)
T 2gb3_A 280 LEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKLEEH-GLKR 321 (409)
T ss_dssp HHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred HHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHc-Ccee
Confidence 112233333322 56778888999999999999999887 6554
No 75
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.86 E-value=4.5e-20 Score=182.27 Aligned_cols=220 Identities=18% Similarity=0.199 Sum_probs=163.0
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEe
Q 013675 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v 253 (438)
.++++.+++++|.++++ + ++|+|+++++.++++++.. +| +++|+++.++|.++..+++..|.+++.+
T Consensus 61 ~~lr~~la~~~~~~~~~----v--~~~~G~~~ai~~~~~~~~~-----~g--~d~Vl~~~p~~~~~~~~~~~~g~~~~~v 127 (356)
T 1fg7_A 61 KAVIENYAQYAGVKPEQ----V--LVSRGADEGIELLIRAFCE-----PG--KDAILYCPPTYGMYSVSAETIGVECRTV 127 (356)
T ss_dssp HHHHHHHHHHHTSCGGG----E--EEESHHHHHHHHHHHHHCC-----TT--TCEEEECSSSCTHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHhCCChHH----E--EEcCCHHHHHHHHHHHHhC-----CC--CCEEEEeCCChHHHHHHHHHcCCEEEEe
Confidence 35666788888987765 6 8999999999999998752 33 2689999999999999999999999999
Q ss_pred eCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHH---HHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCC
Q 013675 254 PVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQEL---GELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I---~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~ 330 (438)
|+++++.+|+++++++++ +|++|++++|+||||.+.|.+++ +++|+ +|+++++|++|+++... .+..
T Consensus 128 ~~~~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~--------~~~~ 197 (356)
T 1fg7_A 128 PTLDNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQ--------ASLA 197 (356)
T ss_dssp CCCTTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGG--------GCSG
T ss_pred eCCCCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCC--------CcHH
Confidence 998888899999999998 89999999999999999886555 45555 89999999999876510 0011
Q ss_pred cc-CCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHH
Q 013675 331 DF-SVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQE 407 (438)
Q Consensus 331 ~~-~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~ 407 (438)
+. ...+.+++..+++|+ +++.| +|+++.+ +++.+........| +....++.++...+...
T Consensus 198 ~~~~~~~~~i~~~s~sK~-~g~~G~r~G~~~~~-~~~~~~l~~~~~~~---------------~~~~~~~~a~~~~l~~~ 260 (356)
T 1fg7_A 198 GWLAEYPHLAILRTLSKA-FALAGLRCGFTLAN-EEVINLLMKVIAPY---------------PLSTPVADIAAQALSPQ 260 (356)
T ss_dssp GGTTTCTTEEEEEESSST-TCCGGGCCEEEEEC-HHHHHHHHHHSCSS---------------CSCHHHHHHHHHHTSHH
T ss_pred HHHhhCCCEEEEecchHh-hcCchhhhEEEEeC-HHHHHHHHHhcCCC---------------CCCHHHHHHHHHHhcCc
Confidence 21 223567888999998 45444 7988874 44433221111111 01123455555556554
Q ss_pred H---HHHHHHHHHHHHHHHHHHhhcCCCc
Q 013675 408 G---YLENTKAIMEVSESIQKGLVLFPMF 433 (438)
Q Consensus 408 g---~~~~~~~~~~~a~~l~~~L~~~~g~ 433 (438)
+ +++..++..++++++.+.|++++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 289 (356)
T 1fg7_A 261 GIVAMRERVAQIIAEREYLIAALKEIPCV 289 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 4 6778888899999999999988653
No 76
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.86 E-value=1e-20 Score=186.91 Aligned_cols=231 Identities=15% Similarity=0.109 Sum_probs=165.0
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCC-CCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc--HHHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKEK-ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA--YDKA 242 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~~-~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s--~~~a 242 (438)
.+...++.+++++.+++++|.+++ + +-++|+|||+++.+++.++. .+| |+|+++.+.|++ +...
T Consensus 44 ~~~~~~~~~~~~~~la~~~g~~~~~~-----~i~~t~g~t~a~~~~~~~l~-----~~g---d~vl~~~~~~~~~~~~~~ 110 (362)
T 2c0r_A 44 GAVYEAVHNEAQARLLALLGNPTGYK-----VLFIQGGASTQFAMIPMNFL-----KEG---QTANYVMTGSWASKALKE 110 (362)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCSSEE-----EEEESSHHHHHHHHHHHHHC-----CTT---CEEEEEECSHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCcE-----EEEECCCchHHHHHHHHhcC-----CCC---CeEEEEecCcHhHHHHHH
Confidence 566677888999999999999764 3 22678999999999999875 267 899888776655 3467
Q ss_pred HhhcCcEEEEeeCCC--CC--ccCHHHHHHhhccCcEEEEEecCCCCCccc-cCHHHHHHHHHHcCCeEEEeccccchhh
Q 013675 243 AQYFNIKLWRVPVDK--EF--RADVKAIKKYINRNTVLIVGSAPGFPHGII-DPIQELGELALSHGTCLHVDLCLGGFVL 317 (438)
Q Consensus 243 ~~~~Gi~v~~v~~~~--~~--~~d~~~Le~~I~~~t~~vv~~~~~~~tG~i-ddi~~I~~la~~~~i~lhVD~a~gg~~~ 317 (438)
++.+| +++.+|+++ ++ .+|.++++ ++++|++|++++++||||.+ .|+++| +|+++|+|++|+.+..
T Consensus 111 ~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~ 181 (362)
T 2c0r_A 111 AKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSR 181 (362)
T ss_dssp HHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSS
T ss_pred HHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCC
Confidence 77889 999999872 23 35766654 78899999999999999995 888887 8999999999864432
Q ss_pred hhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCC-Ccc-CCCCccCCCCCchHH
Q 013675 318 PFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG-GLY-VSPTVAGSRPGGLIA 395 (438)
Q Consensus 318 pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g-~~~-~~~~~~gsr~~~~ia 395 (438)
+++... .|+++.++||++ +|.|+|+++.+++.. +......+.+.. +.. ......++.+...++
T Consensus 182 -----------~~~~~~--~d~~~~s~~K~~-g~~G~G~l~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 246 (362)
T 2c0r_A 182 -----------PFDLNQ--FGLVYAGAQKNL-GPSGVTVVIVREDLV-AESPKHLPTMLRYDTYVKNNSLYNTPPSFGIY 246 (362)
T ss_dssp -----------CCCGGG--CSEEEEETTTTT-CCSSCEEEEEEGGGS-SSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHH
T ss_pred -----------ccchhH--CcEEEEeccccc-cCcCcEEEEEcHHHH-hhccccCchHHhHHHHhhccCcCCCchHHHHH
Confidence 233322 389999999995 799999988875432 211100000000 000 001112344444466
Q ss_pred HHHHHHHHHcHH-HHHHHHHHHHHHHHHHHHHhhcCCCc
Q 013675 396 GAWAALMSLGQE-GYLENTKAIMEVSESIQKGLVLFPMF 433 (438)
Q Consensus 396 ~~~aal~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~g~ 433 (438)
++.++++.+... +++++.++..++++++.+.|++++++
T Consensus 247 a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 285 (362)
T 2c0r_A 247 MVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGF 285 (362)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 777888766554 78999999999999999999988644
No 77
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.86 E-value=2.7e-21 Score=207.01 Aligned_cols=243 Identities=12% Similarity=0.025 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH-HhhcCcEEE
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA-AQYFNIKLW 251 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a-~~~~Gi~v~ 251 (438)
..++++.+++++|.+.. + ++++|+|+|+..++.++. ++| |+|+++.+.|.++..+ +...|++++
T Consensus 175 i~e~e~~lA~~~gae~~-----i--~v~nGtt~an~~ai~al~-----~pG---D~VLv~~~~H~S~~~~~~~l~Ga~~v 239 (730)
T 1c4k_A 175 AVAAEKHAARVYNADKT-----Y--FVLGGSSNANNTVTSALV-----SNG---DLVLFDRNNHKSVYNSALAMAGGRPV 239 (730)
T ss_dssp HHHHHHHHHHHTTCSEE-----E--EESSHHHHHHHHHHHHHC-----CTT---CEEEEETTCCHHHHHHHTTTTCCEEE
T ss_pred HHHHHHHHHHHHCCCcE-----E--EECCHHHHHHHHHHHHhc-----CCC---CEEEEcCCchHHHHHHHHHHCCCEEE
Confidence 45677789999999753 3 788888899999999876 377 8999999999999988 888899999
Q ss_pred EeeCCCC-----CccCHHHH-----HHhhccC------c----EEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEecc
Q 013675 252 RVPVDKE-----FRADVKAI-----KKYINRN------T----VLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (438)
Q Consensus 252 ~v~~~~~-----~~~d~~~L-----e~~I~~~------t----~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a 311 (438)
.++.+.+ +.+|+++| +++|+++ + +++++++|| ++|.+.|+++|+++|+++|+++|+|+|
T Consensus 240 ~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn-~~G~v~dl~~I~~la~~~g~~livDeA 318 (730)
T 1c4k_A 240 YLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGT-YDGTIYNAHEVVKRIGHLCDYIEFDSA 318 (730)
T ss_dssp EECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBC-TTSEEECHHHHHHHHGGGBSEEEEECT
T ss_pred EEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCC-CCCeecCHHHHHHHHHHcCCeEEEEcc
Confidence 9887532 45799999 9999876 5 889999985 799999999999999999999999999
Q ss_pred ccchhhhhhhhcCCCCCCCccCCCCcc----EEEeCCCCCCCCCCCcEEEEEecccccccchhcc-cccCCCccCCCCcc
Q 013675 312 LGGFVLPFAKKLGYPIPPFDFSVQGVT----SISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAV-TEWSGGLYVSPTVA 386 (438)
Q Consensus 312 ~gg~~~pf~~~~g~~~p~~~~~~~gvd----sis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~-~~~~g~~~~~~~~~ 386 (438)
|++.+. |...... ..+++....|+| +++.|+||++.+|.++|+++++++.+........ ..+.. .......
T Consensus 319 h~~~~~-f~~~~~g-~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~--~~~~~~s 394 (730)
T 1c4k_A 319 WVGYEQ-FIPMMRN-SSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNN--SFNLFMS 394 (730)
T ss_dssp TCCGGG-SSGGGGG-GCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCCHHHHHH--HHHHHSC
T ss_pred cccccc-cCcccCC-cCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCcccccCHHHHHH--HHHHhCC
Confidence 975422 2110000 002333344777 9999999998888888999888765411000000 00000 0000112
Q ss_pred CCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhc-CCCccc
Q 013675 387 GSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVL-FPMFLP 435 (438)
Q Consensus 387 gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~ 435 (438)
++.+...++++-+++..+..++..+..++..++++++++.|++ ++|+++
T Consensus 395 tsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v 444 (730)
T 1c4k_A 395 TSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRP 444 (730)
T ss_dssp SSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred CCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEE
Confidence 3344455677777887776644577788999999999999998 788775
No 78
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.86 E-value=2.8e-21 Score=191.18 Aligned_cols=230 Identities=13% Similarity=0.014 Sum_probs=167.6
Q ss_pred cchhHHHHHHHHHHHHHHHhCCCCC-CCCCccceeE-cCChHHHHHHHHHHHHHHHHHhcCCCCCe---EEecCCCcCcH
Q 013675 165 IFQSVARFEAEVIAMTAALLGNKEK-ASGGQVCGNM-TSGGTESILLAVKSSRDYMRNKRGITRPE---MIIPVSAHSAY 239 (438)
Q Consensus 165 ~~~~~~~~e~~~~~~~a~l~g~~~~-~~~~~v~g~~-t~ggt~a~~~al~a~~~~~~~~~G~~~~~---Viv~~~~h~s~ 239 (438)
.++.+.++.+++++.+++++|++++ + + +| |+|||+|+.+++..+. +| ++ |+....+|. +
T Consensus 44 r~~~~~~~~~~~r~~la~ll~~~~~~~----v--~f~t~~~T~a~n~~~~~~~------~~---~~~~~i~~~~~~~~-~ 107 (361)
T 3m5u_A 44 RTKVFEEVHFGAQEKAKKLYELNDDYE----V--LFLQGGASLQFAMIPMNLA------LN---GVCEYANTGVWTKK-A 107 (361)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTCCTTEE----E--EEESSHHHHHHHHHHHHHC------CS---SCEEEEECSHHHHH-H
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCce----E--EEEcCcHHHHHHHHHHhcC------CC---CeEEEEeCCHHHHH-H
Confidence 3567788899999999999999743 4 5 77 9999999999998764 33 43 333344453 4
Q ss_pred HHHHhhcCcEEEEeeCCCCCc--cCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhh
Q 013675 240 DKAAQYFNIKLWRVPVDKEFR--ADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVL 317 (438)
Q Consensus 240 ~~a~~~~Gi~v~~v~~~~~~~--~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~ 317 (438)
.+.++.+|++++.+++++++. +++++ + |+++|++|.+++.+|.+|++.|. +++ +|+++|||++++.+..
T Consensus 108 ~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~~t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~ 178 (361)
T 3m5u_A 108 IKEAQILGVNVKTVASSEESNFDHIPRV-E--FSDNADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSR 178 (361)
T ss_dssp HHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCTTSSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSS
T ss_pred HHHHHHcCCceEEEecccCcCCCcCChh-h--cCCCCCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCC
Confidence 455677899999999998764 57776 4 89999999999999999998552 334 4999999999653332
Q ss_pred hhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCC-Ccc-CCCCccCCCCCchHH
Q 013675 318 PFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG-GLY-VSPTVAGSRPGGLIA 395 (438)
Q Consensus 318 pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g-~~~-~~~~~~gsr~~~~ia 395 (438)
++|+. .+|++++++|||+ +|+|+|++++|++.+.+......+.+.. ... ......|+.+-..++
T Consensus 179 -----------~id~~--~~d~~~~s~~K~~-gp~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~ 244 (361)
T 3m5u_A 179 -----------KVDFS--NIALFYGGVQKNA-GISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIY 244 (361)
T ss_dssp -----------CCCCT--TEEEEEEETTTTS-SCTTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHH
T ss_pred -----------CCCcc--cCCEEEEechhcc-CCCccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHH
Confidence 35554 4899999999996 8999999999865432211000111100 000 011223455556688
Q ss_pred HHHHHHHHHcHH-HHHHHHHHHHHHHHHHHHHhhcCCCc
Q 013675 396 GAWAALMSLGQE-GYLENTKAIMEVSESIQKGLVLFPMF 433 (438)
Q Consensus 396 ~~~aal~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~g~ 433 (438)
++.++++++-.. |++++.++..+++++++++|++++++
T Consensus 245 ~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~ 283 (361)
T 3m5u_A 245 MFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGF 283 (361)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 899999988777 89999999999999999999999876
No 79
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.85 E-value=1.1e-20 Score=190.64 Aligned_cols=239 Identities=15% Similarity=0.086 Sum_probs=165.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcC
Q 013675 168 SVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFN 247 (438)
Q Consensus 168 ~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~G 247 (438)
+..++.+++++.+++++|.+ . . +++++||+|+.+++++++. .+| ++|+++.++|.++..+++..|
T Consensus 39 g~~~l~~~l~~~la~~~g~~-~-----~--i~~~~gt~al~~~~~~~~~----~~g---d~Vl~~~~~~~~~~~~~~~~g 103 (418)
T 2c81_A 39 GEESMERKFAKAFADFNGVP-Y-----C--VPTTSGSTALMLALEALGI----GEG---DEVIVPSLTWIATATAVLNVN 103 (418)
T ss_dssp SSCCHHHHHHHHHHHHHTCS-E-----E--EEESCHHHHHHHHHHHTTC----CTT---CEEEEESSSCTHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHhCCC-c-----E--EEeCCHHHHHHHHHHHcCC----CCc---CEEEECCCccHhHHHHHHHcC
Confidence 33455667778899999987 2 2 7888899999999998721 356 899999999999999999999
Q ss_pred cEEEEeeCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCC
Q 013675 248 IKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYP 326 (438)
Q Consensus 248 i~v~~v~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~ 326 (438)
++++.+|+++ ++.+|+++++++++++|++|++++ |+|...|+++|.++|+++|+++|+|++++.+.. + . +.
T Consensus 104 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~-~-~--~~- 175 (418)
T 2c81_A 104 ALPVFVDVEADTYCIDPQLIKSAITDKTKAIIPVH---LFGSMANMDEINEIAQEHNLFVIEDCAQSHGSV-W-N--NQ- 175 (418)
T ss_dssp CEEEEECBCTTTCSBCHHHHGGGCCTTEEEECCBC---CTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCE-E-T--TE-
T ss_pred CEEEEEecCCCCCCcCHHHHHHhhCCCCeEEEEeC---CcCCcccHHHHHHHHHHCCCEEEEECcccccCc-c-C--CE-
Confidence 9999999987 789999999999999999888654 689999999999999999999999999987652 1 0 00
Q ss_pred CCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccc-cCC--------CccC----CCCccCCCCCch
Q 013675 327 IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTE-WSG--------GLYV----SPTVAGSRPGGL 393 (438)
Q Consensus 327 ~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~-~~g--------~~~~----~~~~~gsr~~~~ 393 (438)
++. ....+++.++++||++.+ ...|+++.+++++.+........ ... ..+. .+...|......
T Consensus 176 --~~~-~~~~~~~~s~s~~K~~~~-g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 251 (418)
T 2c81_A 176 --RAG-TIGDIGAFSCQQGKVLTA-GEGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLS 251 (418)
T ss_dssp --ETT-SSSSEEEEECCTTSSSCS-SSCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCC
T ss_pred --ecc-cccceEEEeccCCcccCC-CCeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcC
Confidence 010 011267777778999544 35677666555543221110000 000 0011 011112111111
Q ss_pred HHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 394 IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 394 ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+.+++.....+++++..++..++++++.+.|+++|++++
T Consensus 252 --~~~aa~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 291 (418)
T 2c81_A 252 --EFQSAILLDQLQELDDKNAIREKNAMFLNDALSKIDGIKV 291 (418)
T ss_dssp --HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 1122222223456788888899999999999999888765
No 80
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.85 E-value=1.5e-20 Score=189.79 Aligned_cols=215 Identities=16% Similarity=0.109 Sum_probs=163.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhh----cC
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY----FN 247 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~----~G 247 (438)
...++.+++++++|.+. + ++++||++|+.++++++. ++| ++|+++.+.|.+....+.. +|
T Consensus 82 ~~~~l~~~la~~~g~~~------~--~~~~sG~~Ai~~al~~l~-----~~G---d~Vi~~~~~y~~~~~~~~~~~~~~g 145 (414)
T 3ndn_A 82 TVSVFEERLRLIEGAPA------A--FATASGMAAVFTSLGALL-----GAG---DRLVAARSLFGSCFVVCSEILPRWG 145 (414)
T ss_dssp HHHHHHHHHHHHHTCSE------E--EEESSHHHHHHHHHHTTC-----CTT---CEEEEESCCCHHHHHHHHTHHHHTT
T ss_pred HHHHHHHHHHHHHCCCc------E--EEECCHHHHHHHHHHHHh-----CCC---CEEEEcCCccchHHHHHHHHHHHcC
Confidence 45566678999998742 3 899999999999998875 367 8999999999997776654 89
Q ss_pred cEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCC
Q 013675 248 IKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPI 327 (438)
Q Consensus 248 i~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~ 327 (438)
++++.+|.+ |+++|+++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++|+.+... .
T Consensus 146 ~~~~~v~~~-----d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~--------~ 212 (414)
T 3ndn_A 146 VQTVFVDGD-----DLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQ--------Q 212 (414)
T ss_dssp CEEEEECTT-----CHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHC--------C
T ss_pred cEEEEeCCC-----CHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccC--------C
Confidence 999999986 899999999999999999999999999999999999999999999999999754321 1
Q ss_pred CCCccCCCCccEEEeCCCCCCCCCCC---cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHH
Q 013675 328 PPFDFSVQGVTSISVDVHKYGLAPKG---TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL 404 (438)
Q Consensus 328 p~~~~~~~gvdsis~s~hK~~~~p~g---~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~ 404 (438)
++ ..|+|+++.+++|++ ++.| .|+++.+++.+..........+ |.... ...+|++++
T Consensus 213 -~~---~~g~div~~S~sK~l-~~~G~~~~G~vv~~~~~~~~~l~~~~~~~-----------g~~~~--~~~a~~~~~-- 272 (414)
T 3ndn_A 213 -GF---PLGVDVVVYSGTKHI-DGQGRVLGGAILGDREYIDGPVQKLMRHT-----------GPAMS--AFNAWVLLK-- 272 (414)
T ss_dssp -CG---GGTCSEEEEETTTTT-TCSSCCCCEEEEECHHHHTTHHHHHHHHH-----------CCCCC--HHHHHHHHH--
T ss_pred -ch---hcCCCeEeccCCccc-cCCCCceEEEEEECHHHHHHHHHHHHHHc-----------CCCCC--HHHHHHHHH--
Confidence 22 347899999999994 5555 6887776543331111111111 11122 225666654
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 405 GQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 405 g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+.+.+..+.++..++++++.+.|++.|+++.
T Consensus 273 ~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~ 303 (414)
T 3ndn_A 273 GLETLAIRVQHSNASAQRIAEFLNGHPSVRW 303 (414)
T ss_dssp HGGGHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEeE
Confidence 4466778888889999999999998887653
No 81
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.85 E-value=3.7e-20 Score=184.93 Aligned_cols=233 Identities=17% Similarity=0.042 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEE
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~ 252 (438)
..++++.+++++|.+ . + ++|+|||+|+.++++++.. ++| ++|+++.++|+++..+++..|++++.
T Consensus 58 ~~~l~~~la~~~~~~--~----~--i~~~~gt~al~~~l~~~~~----~~g---d~vl~~~~~~~~~~~~~~~~g~~~~~ 122 (391)
T 3dr4_A 58 IVEFEKAFADYCGVK--H----A--IACNNGTTALHLALVAMGI----GPG---DEVIVPSLTYIASANSVTYCGATPVL 122 (391)
T ss_dssp HHHHHHHHHHHHTCS--E----E--EEESSHHHHHHHHHHHHTC----CTT---CEEEEESSSCTHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhCCC--c----E--EEeCCHHHHHHHHHHHcCC----CCc---CEEEECCCchHHHHHHHHHCCCEEEE
Confidence 345556788888886 2 3 8999999999999998721 356 89999999999999999999999999
Q ss_pred eeCC-CCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCc
Q 013675 253 VPVD-KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (438)
Q Consensus 253 v~~~-~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~ 331 (438)
+|++ +++.+|+++++++++++|++|+ ++||+|.+.|+++|.++|+++|+++++|++|+.+..+. +. +..
T Consensus 123 ~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~----~~---~~~ 192 (391)
T 3dr4_A 123 VDNDPRTFNLDAAKLEALITPRTKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYR----GK---KSG 192 (391)
T ss_dssp ECBCTTTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEET----TE---ETT
T ss_pred EecCccccCcCHHHHHHhcCCCceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceEC----Ce---eec
Confidence 9998 4789999999999999998887 45689999999999999999999999999987543320 00 000
Q ss_pred cCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhccc-ccCCCccCCCCccCCCCCchHHHHHHHHHHHcHHHHH
Q 013675 332 FSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVT-EWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYL 410 (438)
Q Consensus 332 ~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~-~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g~~ 410 (438)
....+++.+++.||++.+ ...|+++.+++.+.+....... .+...........|...... .+.+++.....++++
T Consensus 193 -~~~di~~~S~s~~K~l~~-g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~--~l~aa~~~~~~~~~~ 268 (391)
T 3dr4_A 193 -SLGDCATFSFFGNAIITT-GEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMT--NIQAAIGLAQLERVD 268 (391)
T ss_dssp -SSSSEEEEECBTTSSSCC-BSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCC--HHHHHHHHHHHHTHH
T ss_pred -ccCCEEEEECCCCCcCCc-CCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCC--HHHHHHHHHHHHHHH
Confidence 111367777779999644 4457767766544332111110 00000000111122222222 344444444557788
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 411 ENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 411 ~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+..++..++++++.+.|+++ ++++
T Consensus 269 ~~~~~~~~~~~~l~~~L~~~-g~~~ 292 (391)
T 3dr4_A 269 EHLAARERVVGWYEQKLARL-GNRV 292 (391)
T ss_dssp HHHHHHHHHHHHHHHHHGGG-TTSE
T ss_pred HHHHHHHHHHHHHHHHhhcC-Cccc
Confidence 89999999999999999987 6553
No 82
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.85 E-value=4.2e-20 Score=185.95 Aligned_cols=247 Identities=17% Similarity=0.156 Sum_probs=171.5
Q ss_pred chhHHHHHHHHHHHHHHHh------C--CCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcC
Q 013675 166 FQSVARFEAEVIAMTAALL------G--NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~------g--~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~ 237 (438)
.++..++++.+.+++.+.+ | .++++ + ++|+|+|+|+.++++++. .+| ++|+++.++|+
T Consensus 74 ~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~----v--~~~~g~~~al~~~~~~l~-----~~g---d~vl~~~p~y~ 139 (416)
T 1bw0_A 74 TVGSPEAREAVATWWRNSFVHKEELKSTIVKDN----V--VLCSGGSHGILMAITAIC-----DAG---DYALVPQPGFP 139 (416)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGG----E--EEESHHHHHHHHHHHHHC-----CTT---CEEEEEESCCT
T ss_pred CCCCHHHHHHHHHHHHhhhcccccCCCCCCcce----E--EEeCChHHHHHHHHHHhC-----CCC---CEEEEcCCCcH
Confidence 3455667776666665322 2 34443 5 899999999999999875 367 89999999999
Q ss_pred cHHHHHhhcCcEEEEeeCCC--CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccc
Q 013675 238 AYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 238 s~~~a~~~~Gi~v~~v~~~~--~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~ 312 (438)
++..+++..|++++.+|+++ ++.+|+++|+++++++++++++++|+||||.+.| +++|+++|++||+++++|++|
T Consensus 140 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 219 (416)
T 1bw0_A 140 HYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIY 219 (416)
T ss_dssp HHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred hHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 99999999999999999875 4679999999999989999999999999999998 999999999999999999999
Q ss_pred cchhhhhhhhcC-CCCCCC-ccCCCCccEEEeCCCCCCCCC-CCcEEEEEecc-cccccchhcccccCCCccCCCCccCC
Q 013675 313 GGFVLPFAKKLG-YPIPPF-DFSVQGVTSISVDVHKYGLAP-KGTSVVLYRNR-EIRKHQFVAVTEWSGGLYVSPTVAGS 388 (438)
Q Consensus 313 gg~~~pf~~~~g-~~~p~~-~~~~~gvdsis~s~hK~~~~p-~g~g~l~~r~~-~~~~~~~~~~~~~~g~~~~~~~~~gs 388 (438)
+++... ..-. ...+++ .+...+.++++.+++|++..| ..+|+++.+++ ++..........+.. ..++
T Consensus 220 ~~~~~~--g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 290 (416)
T 1bw0_A 220 AGMVFK--GKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGM-------LVCG 290 (416)
T ss_dssp TTCBCC--SSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHH-------HHTC
T ss_pred cccccC--CCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhc-------cccC
Confidence 875421 0000 001111 111222356778999994333 34899888875 332211000000000 0001
Q ss_pred CCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 389 r~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
-+....+++.++++....+++++..++..++++++.+.|+++|++++
T Consensus 291 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 337 (416)
T 1bw0_A 291 PCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAP 337 (416)
T ss_dssp SCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred CCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 11112334444554334678889999999999999999998888754
No 83
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.85 E-value=2.4e-20 Score=188.79 Aligned_cols=254 Identities=11% Similarity=0.090 Sum_probs=173.1
Q ss_pred cccchhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCC--eEEecCCCcCc
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRP--EMIIPVSAHSA 238 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~--~Viv~~~~h~s 238 (438)
+....+..++++.+.+++.+.+|.+ +++ + ++|+|||+|+.++++++.. .++| + +|+++.++|.+
T Consensus 78 y~~~~g~~~lr~~la~~~~~~~g~~~~~~~----i--~~t~g~t~al~~~~~~l~~---~~~g---d~~~Vl~~~p~~~~ 145 (437)
T 3g0t_A 78 YPNLDGLPELKQEASRFAKLFVNIDIPARA----C--VPTVGSMQGCFVSFLVANR---THKN---REYGTLFIDPGFNL 145 (437)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCCGGG----E--EEESHHHHHHHHHHHHHTT---SCTT---CSCCEEEEESCCHH
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCccc----E--EEeCCHHHHHHHHHHHHhc---CCCC---CccEEEEeCCCcHh
Confidence 3334455678888888888877764 333 6 8999999999999998750 0156 7 89999999999
Q ss_pred HHHHHhhcCcEEEEeeCCC-CCccCHHHHHHhh-ccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEecccc
Q 013675 239 YDKAAQYFNIKLWRVPVDK-EFRADVKAIKKYI-NRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v~~~~-~~~~d~~~Le~~I-~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~g 313 (438)
+..+++..|++++.+|+++ ++.+|+++|++++ ++++++|++++|+||||.+.| +++|+++|++||+++++|++|+
T Consensus 146 ~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~ 225 (437)
T 3g0t_A 146 NKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYF 225 (437)
T ss_dssp HHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchh
Confidence 9999999999999999975 6679999999999 778999999999999999987 7778999999999999999998
Q ss_pred chhhhhhhhcCC-CC---CC--CccC-CCCccEEEeCCCCCCC-CCCCcEEEEEecccccc-cchhcccccCCCcc----
Q 013675 314 GFVLPFAKKLGY-PI---PP--FDFS-VQGVTSISVDVHKYGL-APKGTSVVLYRNREIRK-HQFVAVTEWSGGLY---- 380 (438)
Q Consensus 314 g~~~pf~~~~g~-~~---p~--~~~~-~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~-~~~~~~~~~~g~~~---- 380 (438)
.+... +. ++ |+ ..+. ..+.++++.++||++. .+.++|+++.+++ +.. ..-.....+.++..
T Consensus 226 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 299 (437)
T 3g0t_A 226 GMDFR-----KDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGK-LYEREYPDLEESFGRLRFGEAL 299 (437)
T ss_dssp TCCTT-----SCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHH-HHHCBCGGGHHHHSCSBHHHHH
T ss_pred hcccC-----CCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHH-HhhhhhhcccccccccchhHHH
Confidence 65541 11 01 11 1222 2566789999999943 3345899887643 332 10000000000000
Q ss_pred CCCCccCCCCCchHHHHHHHHHHHcHHH-----HHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 381 VSPTVAGSRPGGLIAGAWAALMSLGQEG-----YLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 381 ~~~~~~gsr~~~~ia~~~aal~~~g~~g-----~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
......++.......+++++...+.... +++..++..++++++.+.|+++ |+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 358 (437)
T 3g0t_A 300 SSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFNI 358 (437)
T ss_dssp HTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEE
T ss_pred HHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEE
Confidence 0000000000111223444443343322 7888899999999999999987 6553
No 84
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.85 E-value=1.2e-20 Score=190.84 Aligned_cols=237 Identities=12% Similarity=0.077 Sum_probs=174.2
Q ss_pred chhHHHHHHHHHHHHHHHhCCC--CC-CCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNK--EK-ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~--~~-~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a 242 (438)
.++..++++++.+++.+.+|.+ ++ + + ++|+|||+|+.++++++. .+| ++|+++.+.|..+...
T Consensus 76 ~~g~~~l~~~la~~l~~~~g~~~~~~~~----v--~~~~g~~~a~~~~~~~~~-----~~g---d~Vl~~~p~y~~~~~~ 141 (429)
T 1yiz_A 76 GFGHPRLVQALSKLYSQLVDRTINPMTE----V--LVTVGAYEALYATIQGHV-----DEG---DEVIIIEPFFDCYEPM 141 (429)
T ss_dssp SSCCHHHHHHHHHHHHHHHTSCCCTTTS----E--EEESHHHHHHHHHHHHHC-----CTT---CEEEEEESCCTTHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCcCC----E--EEecChHHHHHHHHHHhc-----CCC---CEEEEcCCCchhHHHH
Confidence 3456788888888888888853 44 4 6 899999999999999875 266 8999999999999999
Q ss_pred HhhcCcEEEEeeCCC----------CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEe
Q 013675 243 AQYFNIKLWRVPVDK----------EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVD 309 (438)
Q Consensus 243 ~~~~Gi~v~~v~~~~----------~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD 309 (438)
++..|++++.+|+++ ++.+|+++|++++++++++|++++|+||+|.+.| +++|+++|++||+++++|
T Consensus 142 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 221 (429)
T 1yiz_A 142 VKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSD 221 (429)
T ss_dssp HHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEe
Confidence 999999999999875 3679999999999989999999999999999985 899999999999999999
Q ss_pred ccccchhhhhhhhcCCCCCCCc-c-CCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCc
Q 013675 310 LCLGGFVLPFAKKLGYPIPPFD-F-SVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTV 385 (438)
Q Consensus 310 ~a~gg~~~pf~~~~g~~~p~~~-~-~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~ 385 (438)
++|+++... |...+++. + ...+.|++..++||+ +++.| +|+++.++ ++.+....... . .
T Consensus 222 e~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~s~sK~-~~~~G~r~G~~~~~~-~~~~~l~~~~~-~---------~ 284 (429)
T 1yiz_A 222 EVYEHMVFE-----PFEHIRICTLPGMWERTITIGSAGKT-FSLTGWKIGWAYGPE-ALLKNLQMVHQ-N---------C 284 (429)
T ss_dssp CTTTTCBCT-----TSCCCCGGGSTTTGGGEEEEEEHHHH-HTCGGGCCEEEESCH-HHHHHHHHHHH-T---------T
T ss_pred ccccccccC-----CCCCcChhhccCCcCceEEEecchhc-cCCCCcceEEEEeCH-HHHHHHHHHHh-h---------c
Confidence 999876531 11011222 2 134679999999998 56566 89987764 33322111100 0 0
Q ss_pred cCCCCCchHHHHHHHHHHH----c--HHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 386 AGSRPGGLIAGAWAALMSL----G--QEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 386 ~gsr~~~~ia~~~aal~~~----g--~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
.++.+....+++.++++.. + .+.+++..++..++++++.+.|+++ +++
T Consensus 285 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 338 (429)
T 1yiz_A 285 VYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMN 338 (429)
T ss_dssp TCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCE
T ss_pred ccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCc
Confidence 0111111233444555441 3 4557788888889999999999875 443
No 85
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.85 E-value=4.1e-20 Score=184.37 Aligned_cols=238 Identities=15% Similarity=0.094 Sum_probs=168.8
Q ss_pred HHH-HHHHHHHHHHHHhC--CCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhh
Q 013675 169 VAR-FEAEVIAMTAALLG--NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQY 245 (438)
Q Consensus 169 ~~~-~e~~~~~~~a~l~g--~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~ 245 (438)
..+ +++++.+++.+.+| .++++ + ++|+|+++++.++++++. .+| ++|+++.++|.++..+++.
T Consensus 65 ~~~~lr~~la~~l~~~~g~~~~~~~----v--~~t~g~~~al~~~~~~l~-----~~g---d~vl~~~p~y~~~~~~~~~ 130 (390)
T 1d2f_A 65 KNDEFLAAIAHWFSTQHYTAIDSQT----V--VYGPSVIYMVSELIRQWS-----ETG---EGVVIHTPAYDAFYKAIEG 130 (390)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCCGGG----E--EEESCHHHHHHHHHHHSS-----CTT---CEEEEEESCCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhcCCCCCHHH----E--EEcCCHHHHHHHHHHHhc-----CCC---CEEEEcCCCcHHHHHHHHH
Confidence 445 77778888887778 44444 6 899999999999999875 256 8999999999999999999
Q ss_pred cCcEEEEeeCCCC---CccCHHHHHHhhcc-CcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccchhhh
Q 013675 246 FNIKLWRVPVDKE---FRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLP 318 (438)
Q Consensus 246 ~Gi~v~~v~~~~~---~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg~~~p 318 (438)
.|.+++.+|++++ +.+|+++|++++++ ++++|++++|+||||.+.| +++|+++|++||+++++|++|+++...
T Consensus 131 ~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~ 210 (390)
T 1d2f_A 131 NQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWG 210 (390)
T ss_dssp TTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCS
T ss_pred CCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccC
Confidence 9999999998743 46999999999986 7999999999999999977 889999999999999999999876531
Q ss_pred hhhhcCCCCCCCccCCCCc-cEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHH
Q 013675 319 FAKKLGYPIPPFDFSVQGV-TSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAG 396 (438)
Q Consensus 319 f~~~~g~~~p~~~~~~~gv-dsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~ 396 (438)
|...+++.....+. |. ..+++|++. .+..+|+++.+++++.+....... +.. + .++.+....++
T Consensus 211 -----g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~---~~~----~-~~~~~~~~~~a 276 (390)
T 1d2f_A 211 -----EQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALK---GRD----G-LSSPSVLALTA 276 (390)
T ss_dssp -----SSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHH---TTS----C-CCSCCHHHHHH
T ss_pred -----CCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHh---hhc----c-cCCCCHHHHHH
Confidence 11011111111122 56 889999942 223479988876554432111111 000 0 00111111223
Q ss_pred HHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhc-CCCccc
Q 013675 397 AWAALMSLGQEGYLENTKAIMEVSESIQKGLVL-FPMFLP 435 (438)
Q Consensus 397 ~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~ 435 (438)
+.+++.. +.+.+++..++..++++++.+.|++ +|++++
T Consensus 277 ~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 315 (390)
T 1d2f_A 277 HIAAYQQ-GAPWLDALRIYLKDNLTYIADKMNAAFPELNW 315 (390)
T ss_dssp HHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC
T ss_pred HHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEE
Confidence 3344432 4567788888999999999999988 787754
No 86
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.85 E-value=1.1e-19 Score=180.15 Aligned_cols=225 Identities=12% Similarity=0.083 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcC
Q 013675 170 ARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFN 247 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~G 247 (438)
.++++.+.+++.+.+|.+ +++ + ++|+|+++++..+++++. ++| ++|+++.++|+++..+++..|
T Consensus 72 ~~l~~~la~~l~~~~g~~~~~~~----v--~~~~G~~~al~~~~~~l~-----~~g---d~Vl~~~~~y~~~~~~~~~~g 137 (369)
T 3cq5_A 72 VELRDELAAYITKQTGVAVTRDN----L--WAANGSNEILQQLLQAFG-----GPG---RTALGFQPSYSMHPILAKGTH 137 (369)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGG----E--EEESHHHHHHHHHHHHHC-----STT---CEEEEEESSCTHHHHHHHHTT
T ss_pred HHHHHHHHHhhhhcccCCCChHh----E--EECCChHHHHHHHHHHhc-----CCC---CEEEEcCCChHHHHHHHHHcC
Confidence 578888888888877654 443 5 899999999999998875 366 899999999999999999999
Q ss_pred cEEEEeeCCCCCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCC
Q 013675 248 IKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYP 326 (438)
Q Consensus 248 i~v~~v~~~~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~ 326 (438)
.+++.+|.++++.+|++++++++++ ++++|++++|+||||.+.|++++.++|+.+++++++|++|+++...
T Consensus 138 ~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~-------- 209 (369)
T 3cq5_A 138 TEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPS-------- 209 (369)
T ss_dssp CEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCS--------
T ss_pred CEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCC--------
Confidence 9999999887889999999999988 8999999999999999999999999999999999999999876531
Q ss_pred CCCCcc-CCCC-ccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHH
Q 013675 327 IPPFDF-SVQG-VTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALM 402 (438)
Q Consensus 327 ~p~~~~-~~~g-vdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~ 402 (438)
.+.... ...+ .+++..++||++ +++| +|+++.++ ++.+........| + . ...+++++..
T Consensus 210 ~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~l~~~~~~~------------~-~--~~~~~~a~~~ 272 (369)
T 3cq5_A 210 PSATTLLEKYPTKLVVSRTMSKAF-DFAGGRLGYFVANP-AFIDAVMLVRLPY------------H-L--SALSQAAAIV 272 (369)
T ss_dssp CCGGGGTTTCTTTEEEEEESSSTT-SCGGGCCEEEEECT-HHHHHHHTTSCTT------------C-S--CHHHHHHHHH
T ss_pred cchHHHHhhCCCCEEEEEechHhc-CCcccceEEEEeCH-HHHHHHHHcCCCC------------C-C--CHHHHHHHHH
Confidence 001211 2234 578899999995 4334 79988764 3332211111111 1 1 1123333333
Q ss_pred HHc-HHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 403 SLG-QEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 403 ~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
.+. .+.+++..++..++++++.+.|++. +++
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 304 (369)
T 3cq5_A 273 ALRHSADTLGTVEKLSVERVRVAARLEEL-GYA 304 (369)
T ss_dssp HHHTHHHHHTHHHHHHHHHHHHHHHHHHH-TCE
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHhC-CCE
Confidence 332 3457788888899999999999873 544
No 87
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.85 E-value=3.2e-20 Score=186.13 Aligned_cols=214 Identities=16% Similarity=0.152 Sum_probs=155.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHH----hhc
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA----QYF 246 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~----~~~ 246 (438)
....++++++++++|.+ . . +++++|++|+.++++++. ++| ++|+++.+.|+++...+ +..
T Consensus 64 ~~~~~l~~~la~~~g~~-~-----~--i~~~sG~~a~~~~l~~~~-----~~g---d~vi~~~~~~~~~~~~~~~~~~~~ 127 (398)
T 2rfv_A 64 PTTDALEKKLAVLERGE-A-----G--LATASGISAITTTLLTLC-----QQG---DHIVSASAIYGCTHAFLSHSMPKF 127 (398)
T ss_dssp HHHHHHHHHHHHHHTCS-E-----E--EEESSHHHHHHHHHHHHC-----CTT---CEEEEESSSCHHHHHHHHTHHHHT
T ss_pred hHHHHHHHHHHHHhCCC-c-----E--EEECCHHHHHHHHHHHHh-----CCC---CEEEEcCCCcccHHHHHHHHHHHc
Confidence 45667778899999986 3 2 677778899999999875 366 89999999999988776 778
Q ss_pred CcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCC
Q 013675 247 NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYP 326 (438)
Q Consensus 247 Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~ 326 (438)
|++++.+|.+ |+++++++++++|++|++++|+||+|.+.|+++|+++|++||+++|+|++|+.+..+
T Consensus 128 g~~~~~v~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~-------- 194 (398)
T 2rfv_A 128 GINVRFVDAA-----KPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQ-------- 194 (398)
T ss_dssp TCEEEEECTT-----SHHHHHHHCCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTC--------
T ss_pred CCEEEEeCCC-----CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC--------
Confidence 9999999875 899999999999999999999999999999999999999999999999999755431
Q ss_pred CCCCccCCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHH
Q 013675 327 IPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL 404 (438)
Q Consensus 327 ~p~~~~~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~ 404 (438)
. ++ ..++|+++.++||++.+|.+ +|+++.+++.+..........+.+ ... ....+++++..+
T Consensus 195 ~-~~---~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~----------~~~--~~~~~~~~~~~l 258 (398)
T 2rfv_A 195 Q-PL---QLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITG----------GCM--SPFNAWLTLRGV 258 (398)
T ss_dssp C-GG---GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTC----------CCC--CHHHHHHHHHHH
T ss_pred C-ch---hhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCC----------CCC--CHHHHHHHHhhh
Confidence 1 12 23689999999999767766 588877654332111111111101 011 122455555444
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013675 405 GQEGYLENTKAIMEVSESIQKGLVLFP 431 (438)
Q Consensus 405 g~~g~~~~~~~~~~~a~~l~~~L~~~~ 431 (438)
+.+.+..++..++++++.+.|++.+
T Consensus 259 --~~~~~~~~~~~~~~~~l~~~l~~~~ 283 (398)
T 2rfv_A 259 --KTLGIRMERHCENALKIARFLEGHP 283 (398)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred --hhHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2234445556667777777776643
No 88
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.85 E-value=4.3e-20 Score=181.57 Aligned_cols=227 Identities=15% Similarity=0.062 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEE
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~ 252 (438)
..++++.+++++|.++++ + ++|+|||+|+.++++++. ++| ++|+++.++|.++...++..|++++.
T Consensus 53 ~~~l~~~la~~~~~~~~~----i--~~~~g~~~a~~~~~~~l~-----~~g---d~vl~~~~~~~~~~~~~~~~g~~~~~ 118 (354)
T 3ly1_A 53 ILMLGNKLAAHHQVEAPS----I--LLTAGSSEGIRAAIEAYA-----SLE---AQLVIPELTYGDGEHFAKIAGMKVTK 118 (354)
T ss_dssp HHHHHHHHHHHTTSCGGG----E--EEESHHHHHHHHHHHHHC-----CTT---CEEEEESSSCTHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHHhCCChHH----E--EEeCChHHHHHHHHHHHh-----CCC---CeEEECCCCchHHHHHHHHcCCEEEE
Confidence 456778899999987765 6 899999999999999875 367 89999999999999999999999999
Q ss_pred eeCCCCCccCHHHHHHhhc--cCcEEEEEecCCCCCccccCHHHHHHHHHH--cCCeEEEeccccchhhhhhhhcCCCCC
Q 013675 253 VPVDKEFRADVKAIKKYIN--RNTVLIVGSAPGFPHGIIDPIQELGELALS--HGTCLHVDLCLGGFVLPFAKKLGYPIP 328 (438)
Q Consensus 253 v~~~~~~~~d~~~Le~~I~--~~t~~vv~~~~~~~tG~iddi~~I~~la~~--~~i~lhVD~a~gg~~~pf~~~~g~~~p 328 (438)
+|.++++.+|+++|+++++ ++|++|++++|+||+|.+.|.+++.++++. +|+++++|++|+++... +...+
T Consensus 119 ~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~-----~~~~~ 193 (354)
T 3ly1_A 119 VKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVND-----PRFRS 193 (354)
T ss_dssp ECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCC-----TTCCC
T ss_pred ecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccc-----cccCC
Confidence 9999889999999999998 789999999999999999999988888887 99999999999865431 10001
Q ss_pred CCcc-CCC-CccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHc
Q 013675 329 PFDF-SVQ-GVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG 405 (438)
Q Consensus 329 ~~~~-~~~-gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g 405 (438)
.+.. ... +.++++.++||++. .+.++|+++.+ +++.......... ++-+....+++.++++ .
T Consensus 194 ~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~------------~~~~~~~~~a~~~~l~--~ 258 (354)
T 3ly1_A 194 ISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH-PTVIALMGRYVAG------------EKINFSGVDAALASMN--D 258 (354)
T ss_dssp SHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC-HHHHHHHGGGTTC------------SCCCHHHHHHHHHHTT--C
T ss_pred HHHHhhhcCCCEEEEeeChhhccChhhhheeeecC-HHHHHHHHHhcCC------------CCCCHHHHHHHHHHhc--C
Confidence 1111 112 56788999999953 44567887764 4433322111111 1111112223333332 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 406 QEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 406 ~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
.+.+++..++..++++++.+.|+++ +++
T Consensus 259 ~~~~~~~~~~~~~~~~~l~~~l~~~-~~~ 286 (354)
T 3ly1_A 259 SAFITYSKKSNDVSRQILLKALEDL-KLP 286 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 3667888889999999999999876 444
No 89
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.85 E-value=5.1e-20 Score=186.42 Aligned_cols=238 Identities=17% Similarity=0.154 Sum_probs=171.3
Q ss_pred cccchhHHHHHHHHHHHHHHHhC-----CCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcC
Q 013675 163 LDIFQSVARFEAEVIAMTAALLG-----NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g-----~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~ 237 (438)
|...++..++++ .++++++ .++++ + ++|+|||+|+.++++++.+ +| ++|+++.++|.
T Consensus 92 y~~~~g~~~lr~----~la~~~~~~~~~~~~~~----v--~~t~g~t~al~~~~~~l~~-----~g---d~vl~~~p~~~ 153 (427)
T 3dyd_A 92 YAPSIGFLSSRE----EIASYYHCPEAPLEAKD----V--ILTSGCSQAIDLCLAVLAN-----PG---QNILVPRPGFS 153 (427)
T ss_dssp CCCTTCCHHHHH----HHHHHHCBTTBCCCGGG----E--EEESSHHHHHHHHHHHHCC-----TT---CEEEEEESCCT
T ss_pred CCCCCCcHHHHH----HHHHHHhhcCCCCChHH----E--EEecCcHHHHHHHHHHhcC-----CC---CEEEEcCCCch
Confidence 333444444444 5666666 44444 6 8999999999999999863 66 89999999999
Q ss_pred cHHHHHhhcCcEEEEeeCCC--CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccc
Q 013675 238 AYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 238 s~~~a~~~~Gi~v~~v~~~~--~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~ 312 (438)
.+...++..|++++.+|+++ ++.+|+++|++++++++++|++++|+||||.+.| +++|+++|+++|+++++|++|
T Consensus 154 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay 233 (427)
T 3dyd_A 154 LYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIY 233 (427)
T ss_dssp HHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred hHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCc
Confidence 99999999999999999864 6789999999999999999999999999999999 999999999999999999999
Q ss_pred cchhhhhhhhcCCCCCCCccCCCCc-cEEEeCCCCC-CCCCCCcEEEEEecc------cccccchhc-ccccCCCccCCC
Q 013675 313 GGFVLPFAKKLGYPIPPFDFSVQGV-TSISVDVHKY-GLAPKGTSVVLYRNR------EIRKHQFVA-VTEWSGGLYVSP 383 (438)
Q Consensus 313 gg~~~pf~~~~g~~~p~~~~~~~gv-dsis~s~hK~-~~~p~g~g~l~~r~~------~~~~~~~~~-~~~~~g~~~~~~ 383 (438)
+++... |...+++....... .+++.+++|. +..+..+|+++.+++ ++....... ...|
T Consensus 234 ~~~~~~-----g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~-------- 300 (427)
T 3dyd_A 234 GDMVFS-----DCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRIL-------- 300 (427)
T ss_dssp TTCBCS-----SCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHC--------
T ss_pred hhhccC-----CCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhccC--------
Confidence 876531 11011121111122 3556799997 334445899888864 222111000 0011
Q ss_pred CccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 384 TVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 384 ~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+.+....+++.+++.....+++++..++..++++++.+.|+++|++++
T Consensus 301 ----~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 348 (427)
T 3dyd_A 301 ----GPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRP 348 (427)
T ss_dssp ----CSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred ----CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 111112334445554445678899999999999999999999988764
No 90
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.85 E-value=2.2e-20 Score=188.30 Aligned_cols=227 Identities=13% Similarity=0.123 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH----HhhcC
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA----AQYFN 247 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a----~~~~G 247 (438)
...++++++++++|.+ + + ++|+|||+|+.++++++. ++| ++|+++.+.|.+.... ++..|
T Consensus 57 ~~~~l~~~la~~~g~~--~----~--~~~~~gt~a~~~al~~l~-----~~g---d~vi~~~~~~~~~~~~~~~~~~~~g 120 (412)
T 2cb1_A 57 TAKALEERLKALEGAL--E----A--VVLASGQAATFAALLALL-----RPG---DEVVAAKGLFGQTIGLFGQVLSLMG 120 (412)
T ss_dssp HHHHHHHHHHHHHTCS--E----E--EEESSHHHHHHHHHHTTC-----CTT---CEEEEETTCCHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHHhCCC--c----E--EEECCHHHHHHHHHHHHh-----CCC---CEEEEeCCCchhHHHHHHHHHHHcC
Confidence 3556667899999875 2 4 899999999999999874 256 8999999999886665 44579
Q ss_pred cEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCC
Q 013675 248 IKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPI 327 (438)
Q Consensus 248 i~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~ 327 (438)
++++.+|++ +++|+++++++|++|++++|+||+|.+.|+++|+++|++||+++|+|++|+.+...
T Consensus 121 ~~~~~~~~~------~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~--------- 185 (412)
T 2cb1_A 121 VTVRYVDPE------PEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGAL--------- 185 (412)
T ss_dssp CEEEEECSS------HHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTS---------
T ss_pred CEEEEECCC------HHHHHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccc---------
Confidence 999999864 89999999999999999999999999999999999999999999999999765211
Q ss_pred CCCccCCCCccEEEeCCCCCCCCCCC-cEEEEEecccccccchh-cc-cccCCC---------cc------CCCCccCCC
Q 013675 328 PPFDFSVQGVTSISVDVHKYGLAPKG-TSVVLYRNREIRKHQFV-AV-TEWSGG---------LY------VSPTVAGSR 389 (438)
Q Consensus 328 p~~~~~~~gvdsis~s~hK~~~~p~g-~g~l~~r~~~~~~~~~~-~~-~~~~g~---------~~------~~~~~~gsr 389 (438)
.+....++|+++.|+||++.+|.+ .|+++++++......+. .. +...|. .+ ......|..
T Consensus 186 --~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~ 263 (412)
T 2cb1_A 186 --CRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMA 263 (412)
T ss_dssp --CCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCC
T ss_pred --CCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCCC
Confidence 111234689999999999777776 77777766432100000 00 000000 00 000111221
Q ss_pred CCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 390 PGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 390 ~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.. ..++|+.+. +.+.+.+..++..++++++.+.|.+.|+++.
T Consensus 264 ~~--~~~a~~~~~--~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~ 305 (412)
T 2cb1_A 264 LS--PFNAYLLFQ--GLETVALRVARMSETARFLAERLQGHPKVKA 305 (412)
T ss_dssp CC--HHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHHHHTCTTCSE
T ss_pred CC--hHHhHHHHc--CCchHHHHHHHHHHHHHHHHHHHHcCCCeeE
Confidence 11 224455443 3345567777788899999999999888763
No 91
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.85 E-value=6.7e-20 Score=186.39 Aligned_cols=213 Identities=11% Similarity=0.055 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH----Hhhc
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA----AQYF 246 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a----~~~~ 246 (438)
....++++.+++++|.+ .. +++++|++|+.++++++. ++| ++|+++.+.|.+.... ++.+
T Consensus 114 ~~~~~l~~~lA~l~g~~-~~-------v~~~sG~~Ai~~al~~l~-----~~G---d~Vi~~~~~y~~~~~~~~~~~~~~ 177 (445)
T 1qgn_A 114 PTTVVLEEKISALEGAE-ST-------LLMASGMCASTVMLLALV-----PAG---GHIVTTTDCYRKTRIFIETILPKM 177 (445)
T ss_dssp HHHHHHHHHHHHHHTCS-EE-------EEESCHHHHHHHHHHHHS-----CSS---CEEEEETTSCHHHHHHHHHTGGGG
T ss_pred hHHHHHHHHHHHHhCCC-cE-------EEeCCHHHHHHHHHHHHh-----CCC---CEEEEcCCCchhHHHHHHHHHHHc
Confidence 34556667899999986 32 566667799999999865 367 8999999999886663 5667
Q ss_pred CcEEEEeeCCCCCccCHHHHHHhhccCc-EEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCC
Q 013675 247 NIKLWRVPVDKEFRADVKAIKKYINRNT-VLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGY 325 (438)
Q Consensus 247 Gi~v~~v~~~~~~~~d~~~Le~~I~~~t-~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~ 325 (438)
|++++.+|.+ |+++++++|+++| ++|++++|+||+|.+.|+++|+++|+++|+++|+|++|+.+..
T Consensus 178 G~~v~~v~~~-----d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~-------- 244 (445)
T 1qgn_A 178 GITATVIDPA-----DVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLN-------- 244 (445)
T ss_dssp TCEEEEECSS-----CHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT--------
T ss_pred CCEEEEeCCC-----CHHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc--------
Confidence 9999999875 8999999999999 9999999999999999999999999999999999999874432
Q ss_pred CCCCCccCCCCccEEEeCCCCCCCCCCC---cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHH
Q 013675 326 PIPPFDFSVQGVTSISVDVHKYGLAPKG---TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALM 402 (438)
Q Consensus 326 ~~p~~~~~~~gvdsis~s~hK~~~~p~g---~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~ 402 (438)
.+....|+|+++.|+||+ ++|.| +|+++.++ ++........ .. .|.... ...+|.+++
T Consensus 245 ----~~~~~~g~Div~~S~sK~-~gg~gd~~~G~l~~~~-~l~~~l~~~~-~~----------~g~~~~--~~~a~~~~~ 305 (445)
T 1qgn_A 245 ----QKALALGADLVLHSATKF-LGGHNDVLAGCISGPL-KLVSEIRNLH-HI----------LGGALN--PNAAYLIIR 305 (445)
T ss_dssp ----CCTTTTTCSEEEECTTTT-TTCSSSCCCEEEEECH-HHHHHHHHHH-HH----------HCCCCC--HHHHHHHHH
T ss_pred ----CCccccCCEEEEECCccc-ccccccceEEEEEECH-HHHHHHHHHH-HH----------hCCCCC--HHHHHHHHH
Confidence 111235789999999999 56666 88877764 3332211100 00 111111 224555553
Q ss_pred HHcHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 013675 403 SLGQEGYLENTKAIMEVSESIQKGLVLFPMF 433 (438)
Q Consensus 403 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~ 433 (438)
. .+.+..+.++..++++++.+.|+++|++
T Consensus 306 ~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v 334 (445)
T 1qgn_A 306 G--MKTLHLRVQQQNSTALRMAEILEAHPKV 334 (445)
T ss_dssp H--GGGHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred h--HHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 3 3455666777788899999999998876
No 92
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.85 E-value=2e-20 Score=187.23 Aligned_cols=229 Identities=16% Similarity=0.093 Sum_probs=166.9
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhc
Q 013675 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF 246 (438)
Q Consensus 167 ~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~ 246 (438)
.+..++.+++++++++++|.+ + + ++|+|||+|+.++++++. .+| ++|+++.+.|+++..+++..
T Consensus 84 ~g~~~~~~~l~~~la~~~g~~--~----v--~~~~ggt~a~~~~~~~~~-----~~g---d~V~~~~p~~~~~~~~~~~~ 147 (398)
T 3a2b_A 84 NGTLDIHVELEEKLSAYVGKE--A----A--ILFSTGFQSNLGPLSCLM-----GRN---DYILLDERDHASIIDGSRLS 147 (398)
T ss_dssp TCCCHHHHHHHHHHHHHHTCS--E----E--EEESSHHHHHHHHHHHSS-----CTT---CEEEEETTCCHHHHHHHHHS
T ss_pred cCCcHHHHHHHHHHHHHhCCC--c----E--EEECCHHHHHHHHHHHHh-----CCC---CEEEECCccCHHHHHHHHHc
Confidence 344567788899999999974 3 5 899999999999999875 366 89999999999999999999
Q ss_pred CcEEEEeeCCCCCccCHHHHHHhhcc----CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhh
Q 013675 247 NIKLWRVPVDKEFRADVKAIKKYINR----NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKK 322 (438)
Q Consensus 247 Gi~v~~v~~~~~~~~d~~~Le~~I~~----~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~ 322 (438)
|.+++.+|. +|+++|++++++ ++++|++++++||||.+.|+++|.++|++||+++++|++|+.+... .
T Consensus 148 g~~~~~v~~-----~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~---~ 219 (398)
T 3a2b_A 148 FSKVIKYGH-----NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIG---H 219 (398)
T ss_dssp SSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSS---G
T ss_pred CCceEEeCC-----CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccC---C
Confidence 999999986 589999999987 7999999999999999999999999999999999999999755321 0
Q ss_pred cCCCCCCCcc-C-CCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHH
Q 013675 323 LGYPIPPFDF-S-VQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (438)
Q Consensus 323 ~g~~~p~~~~-~-~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aa 400 (438)
.+ .+..+. . ..++|+++.++||+ ++|.| |+++.+ +++.+........|... ++......+++.++
T Consensus 220 ~~--~~~~~~~~~~~~~di~~~s~sK~-~~~~G-G~~~~~-~~~~~~l~~~~~~~~~~--------~~~~~~~~a~~~~~ 286 (398)
T 3a2b_A 220 KG--AGTASHFGLNDDVDLIMGTFSKS-LASLG-GFVAGD-ADVIDFLKHNARSVMFS--------ASMTPASVASTLKA 286 (398)
T ss_dssp GG--CCHHHHHTCGGGCSEEEEESSST-TCSSC-EEEEEC-HHHHHHHHHHCHHHHSS--------BCCCHHHHHHHHHH
T ss_pred CC--CchHhhcCCCcCCeEEEeccccc-ccCCC-cEEEeC-HHHHHHHHHhcccceec--------CCCCHHHHHHHHHH
Confidence 01 000010 1 12469999999999 56888 887775 44332211110111000 01111112234456
Q ss_pred HHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 401 LMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 401 l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
++.+ +.+++..++..++++++.+.|+++ |+++
T Consensus 287 l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 318 (398)
T 3a2b_A 287 LEII--QNEPEHIEKLWKNTDYAKAQLLDH-GFDL 318 (398)
T ss_dssp HHHH--HHCTHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred HHHH--hhCHHHHHHHHHHHHHHHHHHHhc-CCCc
Confidence 6543 335678888899999999999887 5543
No 93
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.85 E-value=5e-20 Score=182.54 Aligned_cols=225 Identities=16% Similarity=0.060 Sum_probs=155.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEe
Q 013675 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v 253 (438)
.++++.+++++|.+ . + ++|+|||+|+.+++++++. ++| ++|+++..+|.++..++...|++++.+
T Consensus 38 ~~l~~~la~~~~~~--~----~--~~~~sGt~al~~al~~~~~----~~g---d~Vi~~~~~~~~~~~~~~~~G~~~~~~ 102 (367)
T 3nyt_A 38 TELEDRLADFVGAK--Y----C--ISCANGTDALQIVQMALGV----GPG---DEVITPGFTYVATAETVALLGAKPVYV 102 (367)
T ss_dssp HHHHHHHHHHHTCS--E----E--EEESCHHHHHHHHHHHTTC----CTT---CEEEEESSSCTHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCC--c----E--EEeCCHHHHHHHHHHHhCC----CCc---CEEEECCCccHHHHHHHHHcCCEEEEE
Confidence 34555788888886 2 3 8999999999999998731 356 899999999999999999999999999
Q ss_pred eCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCcc
Q 013675 254 PVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDF 332 (438)
Q Consensus 254 ~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~ 332 (438)
|+++ ++.+|+++++++|+++|++|+ +++++|...|+++|.++|+++|+++|+|++++.+.. + . + ...
T Consensus 103 ~~~~~~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~-~-~--~-----~~~ 170 (367)
T 3nyt_A 103 DIDPRTYNLDPQLLEAAITPRTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGAS-Y-K--G-----KRS 170 (367)
T ss_dssp CBCTTTCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCE-E-T--T-----EET
T ss_pred ecCCccCCcCHHHHHHhcCcCCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCe-E-C--C-----eec
Confidence 9987 489999999999999999887 677899999999999999999999999999863322 0 0 1 011
Q ss_pred CCCCccEEEeC--CCCCCCCCCCcEEEEEecccccccchhcccccCCCc-cCCCCccCCCCCchHHHHHHHHHHHcHHHH
Q 013675 333 SVQGVTSISVD--VHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGL-YVSPTVAGSRPGGLIAGAWAALMSLGQEGY 409 (438)
Q Consensus 333 ~~~gvdsis~s--~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~-~~~~~~~gsr~~~~ia~~~aal~~~g~~g~ 409 (438)
...+ |++++| +||++.++...|+++.+++++......... .|.. .......|.........+.+++.. .+.+
T Consensus 171 ~~~~-di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~--~g~~~~~~~~~~g~~~~~~~~~aa~~~~~--l~~~ 245 (367)
T 3nyt_A 171 CNLS-TVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIAR--HGQDRRYHHIRVGVNSRLDTLQAAILLPK--LEIF 245 (367)
T ss_dssp TSSS-SEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTB--TTEEETTEECSCCCBCCCCHHHHHHHHHH--HHTH
T ss_pred cCCC-CEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHh--cCCCcCceeeccCcCCCccHHHHHHHHHH--HHHH
Confidence 1112 777777 589954323367766666655432211110 0100 000011122221111233333332 3456
Q ss_pred HHHHHHHHHHHHHHHHHhhcC
Q 013675 410 LENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 410 ~~~~~~~~~~a~~l~~~L~~~ 430 (438)
++..++..++++++.+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~L~~~ 266 (367)
T 3nyt_A 246 EEEIALRQKVAAEYDLSLKQV 266 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhccC
Confidence 778888899999999999887
No 94
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.84 E-value=9.1e-20 Score=183.16 Aligned_cols=232 Identities=16% Similarity=0.128 Sum_probs=161.5
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH---HH
Q 013675 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK---AA 243 (438)
Q Consensus 167 ~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~---a~ 243 (438)
+...++++.+++++++++|.++++ + ++ ++||+|+.++++++. ++| ++|+++.++|.++.. ..
T Consensus 67 ~~~~~~~~~~~~~la~~~g~~~~~----i--~~-~sGt~a~~~~~~~~~-----~~g---d~vl~~~~~~~~~~~~~~~~ 131 (417)
T 3n0l_A 67 EFVDEIETLAIERCKKLFNCKFAN----V--QP-NSGSQANQGVYAALI-----NPG---DKILGMDLSHGGHLTHGAKV 131 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEE----C--CC-SSHHHHHHHHHHHHS-----CTT---CEEEEECC------------
T ss_pred hHHHHHHHHHHHHHHHHhCCCCcc----e--Ee-ccHHHHHHHHHHHhc-----CCC---CEEEecccccccccchhhhh
Confidence 556778888999999999997665 3 44 455999999999875 367 899999999987654 33
Q ss_pred hhc--CcEEEEeeCCCCCccCHHHHHHhhc-cCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhh
Q 013675 244 QYF--NIKLWRVPVDKEFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (438)
Q Consensus 244 ~~~--Gi~v~~v~~~~~~~~d~~~Le~~I~-~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~ 320 (438)
... ++.++.+++++++.+|+++|+++++ ++|++|++++++| |.+.|+++|.++|++||+++++|++++.....
T Consensus 132 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-- 207 (417)
T 3n0l_A 132 SSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVV-- 207 (417)
T ss_dssp ----CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHH--
T ss_pred hhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhh--
Confidence 333 4566777777788899999999998 6899999888875 99999999999999999999999997544331
Q ss_pred hhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHH
Q 013675 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAA 400 (438)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aa 400 (438)
.+. . +. ...++|+++.++||++.+|.| |+++.+++++.+........ ...++.....++++.++
T Consensus 208 --~~~-~-~~--~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~aa~~~a 271 (417)
T 3n0l_A 208 --AGE-H-PS--PFPYAHVVSSTTHKTLRGPRG-GIIMTNDEELAKKINSAIFP---------GIQGGPLMHVIAAKAVG 271 (417)
T ss_dssp --TTS-S-CC--CTTTCSEEEEESSTTTCSCSC-EEEEESCHHHHHHHHHHHTT---------TTCSSCCHHHHHHHHHH
T ss_pred --ccc-C-CC--ccccceEEEeeCccccCCCCe-eEEEECCHHHHHHHhhhhCC---------cccCCcHHHHHHHHHHH
Confidence 111 0 11 122579999999999766665 88877755544322111110 11122233345566667
Q ss_pred HHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 401 LMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 401 l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
+.....+++++..++..++++++.+.|++ .+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~ 304 (417)
T 3n0l_A 272 FKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKFK 304 (417)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTCE
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCce
Confidence 76655677889999999999999999987 4554
No 95
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.84 E-value=2.5e-21 Score=197.45 Aligned_cols=220 Identities=12% Similarity=0.023 Sum_probs=161.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEE
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLW 251 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~ 251 (438)
...++++++++ +|.+ .. + ++|+|+|+|+.++++++. ++| ++|+++.++|.++..++...|++++
T Consensus 58 ~~~~~~~~la~-~g~~-~~----v--~~~~G~t~a~~~~~~a~~-----~~g---d~Vlv~~~~h~s~~~~~~~~G~~~~ 121 (446)
T 2x3l_A 58 VILKSMKQVEK-HSDY-DG----Y--FLVNGTTSGILSVIQSFS-----QKK---GDILMARNVHKSVLHALDISQQEGH 121 (446)
T ss_dssp HHHHHHHHHCS-CTTE-EE----E--EESSHHHHHHHHHHHTTT-----TSS---SCEEECTTCCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHh-cCCC-ce----E--EEeCCHHHHHHHHHHHhc-----CCC---CEEEEecCccHHHHHHHHHcCCeEE
Confidence 45677778999 9987 33 4 899999999999999885 367 8999999999999999999999999
Q ss_pred EeeC--CCC----CccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCC
Q 013675 252 RVPV--DKE----FRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGY 325 (438)
Q Consensus 252 ~v~~--~~~----~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~ 325 (438)
.++. +++ +.+|++++ +++++++|+++++| ++|.+.|+++|+++|++||+++|+|+++++ .+.|...
T Consensus 122 ~v~~~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~~n-~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~--- 193 (446)
T 2x3l_A 122 FIETHQSPLTNHYNKVNLSRL---NNDGHKLVVLTYPN-YYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGF--- 193 (446)
T ss_dssp ECEEEECTTTSSEEEEEC----------CCEEEEESSC-TTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTS---
T ss_pred EEeCeeccccCcCCCCCHHHH---cCCCceEEEEECCC-CCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCC---
Confidence 9998 654 67899988 56789999999954 499999999999999999999999999987 4433211
Q ss_pred CCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHc
Q 013675 326 PIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG 405 (438)
Q Consensus 326 ~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g 405 (438)
+++....++|+++.|+||++++|.|+|+++.+++.+....+.... .....++.+...++++.++++.+.
T Consensus 194 ---~~~~~~~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~--------~~~~~~s~~~~~~aal~~a~~~l~ 262 (446)
T 2x3l_A 194 ---PDSTLNYQADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYL--------SYFQTSSPSYLIMASLESAAQFYK 262 (446)
T ss_dssp ---CCCGGGGTCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHH--------HHHSCSSCCHHHHHHHHHHHHHHH
T ss_pred ---CCChHHcCCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHH--------HHHcCCCchHHHHHHHHHHHHHHH
Confidence 233344568999999999888999999999886633211111000 001123334445667777777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 013675 406 QEGYLENTKAIMEVSESIQKG 426 (438)
Q Consensus 406 ~~g~~~~~~~~~~~a~~l~~~ 426 (438)
..|.++..++..++++++++.
T Consensus 263 ~~g~~~~~~~~~~l~~~l~~~ 283 (446)
T 2x3l_A 263 TYDSTLFFAKRAQLIECLENK 283 (446)
T ss_dssp HCCCHHHHHHHHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHHHHHHc
Confidence 556556788888888888876
No 96
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.84 E-value=2.3e-19 Score=178.99 Aligned_cols=245 Identities=13% Similarity=0.101 Sum_probs=170.0
Q ss_pred HHHHHhhccCCCCcccchhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCC
Q 013675 150 EACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRP 227 (438)
Q Consensus 150 ~~~~~~~~~n~~~~~~~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~ 227 (438)
+++...+......+....+..++++++.+++.+.+|.+ +++ + ++|+|||+|+.++++++. ++| +
T Consensus 51 ~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~----v--~~t~g~~~al~~~~~~l~-----~~g---d 116 (391)
T 3h14_A 51 EALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGR----V--VITPGSSGGFLLAFTALF-----DSG---D 116 (391)
T ss_dssp HHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGG----E--EEESSHHHHHHHHHHHHC-----CTT---C
T ss_pred HHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHH----E--EEecChHHHHHHHHHHhc-----CCC---C
Confidence 33433333333344444556788888888888888854 443 6 999999999999999875 367 8
Q ss_pred eEEecCCCcCcHHHHHhhcCcEEEEeeCCC--CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHc
Q 013675 228 EMIIPVSAHSAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSH 302 (438)
Q Consensus 228 ~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~~--~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~ 302 (438)
+|+++.++|.++...++..|++++.+|+++ ++.+|+++++++ +|++|++++|+||||.+.| +++|+++|++|
T Consensus 117 ~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~ 193 (391)
T 3h14_A 117 RVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQ 193 (391)
T ss_dssp EEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHc
Confidence 999999999999999999999999999986 457899999987 7899999999999999987 88999999999
Q ss_pred CCeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccC
Q 013675 303 GTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYV 381 (438)
Q Consensus 303 ~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~ 381 (438)
|+++++|++|+++... +...+.. ...+.++++.+.+|.+. .+.++|+++.+++ +..........+..
T Consensus 194 ~~~li~De~~~~~~~~-----~~~~~~~--~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~---- 261 (391)
T 3h14_A 194 GASFISDEIYHGIEYE-----AKAVTAL--ELTDECYVINSFSKYFSMTGWRVGWMVVPED-QVRVVERIAQNMFI---- 261 (391)
T ss_dssp TCEEEEECTTTTCBSS-----SCCCCGG--GTCSSSEEEEESSSTTCCTTSCCEEEECCGG-GHHHHHHHHHHTTC----
T ss_pred CCEEEEECcchhcccC-----CCCcChh--hcCCCEEEEEechhccCCccceeEEEEeCHH-HHHHHHHHHhhhcc----
Confidence 9999999999875531 1001111 12345678889999953 4455788776543 33221111111110
Q ss_pred CCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013675 382 SPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFP 431 (438)
Q Consensus 382 ~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~ 431 (438)
+-+....+++.+++. +.+.+++..++..++++++.+.|++++
T Consensus 262 ------~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~ 303 (391)
T 3h14_A 262 ------CAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKAG 303 (391)
T ss_dssp ------CCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------CCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 111111223334443 567788889999999999999998763
No 97
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.84 E-value=6.4e-20 Score=184.04 Aligned_cols=216 Identities=16% Similarity=0.136 Sum_probs=159.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHH----hhc
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA----QYF 246 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~----~~~ 246 (438)
....++++.+++++|.+ . . +++++||+|+.++++++. ++| ++|+++.+.|.++...+ ...
T Consensus 65 ~~~~~l~~~la~~~g~~-~-----~--i~~~sG~~a~~~~l~~~~-----~~g---d~vl~~~~~~~~~~~~~~~~~~~~ 128 (398)
T 1gc0_A 65 PTLNLLEARMASLEGGE-A-----G--LALASGMGAITSTLWTLL-----RPG---DEVLLGNTLYGCTFAFLHHGIGEF 128 (398)
T ss_dssp HHHHHHHHHHHHHHTCS-E-----E--EEESSHHHHHHHHHHHHC-----CTT---CEEEEESSCCSHHHHHHHHTGGGG
T ss_pred hHHHHHHHHHHHHhCCC-c-----E--EEECCHHHHHHHHHHHHh-----cCC---CEEEEeCCCchhHHHHHHHHHHHc
Confidence 34556667889999986 3 2 677778999999999874 256 89999999999987765 667
Q ss_pred CcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCC
Q 013675 247 NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYP 326 (438)
Q Consensus 247 Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~ 326 (438)
|++++.+|.+ |+++++++|+++|++|++++|+||+|.+.|+++|+++|+++|+++|+|++|+.+..+
T Consensus 129 g~~~~~~~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~-------- 195 (398)
T 1gc0_A 129 GVKLRHVDMA-----DLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQ-------- 195 (398)
T ss_dssp TCEEEEECTT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHC--------
T ss_pred CCEEEEECCC-----CHHHHHHhcCCCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccC--------
Confidence 9999999874 899999999999999999999999999999999999999999999999999866542
Q ss_pred CCCCccCCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHH
Q 013675 327 IPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL 404 (438)
Q Consensus 327 ~p~~~~~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~ 404 (438)
. ++ ..++|+++.++||++.+|.+ .|+++.+++.+..........+.++ ... ...+|+++..+
T Consensus 196 ~-~~---~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~----------~~~--~~~~~~~~~~l 259 (398)
T 1gc0_A 196 R-PL---ELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGA----------VLS--PHDAALLMRGI 259 (398)
T ss_dssp C-GG---GGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCC----------CCC--HHHHHHHHHHH
T ss_pred C-ch---hhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCC----------CCC--HHHHHHHHhcc
Confidence 1 22 24689999999999766765 5887776543321111100000111 111 22455555433
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 013675 405 GQEGYLENTKAIMEVSESIQKGLVLFPMF 433 (438)
Q Consensus 405 g~~g~~~~~~~~~~~a~~l~~~L~~~~g~ 433 (438)
+.+....++..++++++.+.|+++|++
T Consensus 260 --~~~~~~~~~~~~~~~~l~~~L~~~~~v 286 (398)
T 1gc0_A 260 --KTLNLRMDRHCANAQVLAEFLARQPQV 286 (398)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred --chHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 345667777788888888888876654
No 98
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.84 E-value=3.7e-20 Score=183.54 Aligned_cols=234 Identities=12% Similarity=0.050 Sum_probs=169.2
Q ss_pred HHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcC
Q 013675 170 ARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFN 247 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~G 247 (438)
.++++.+.+++.+.+|.+ +++ + ++|+|||+|+..+++++. ++| ++|+++.++|.++...++..|
T Consensus 61 ~~lr~~la~~~~~~~~~~~~~~~----i--~~t~g~~~a~~~~~~~~~-----~~g---d~vl~~~~~~~~~~~~~~~~g 126 (377)
T 3fdb_A 61 SLLSQATAEFYADRYGYQARPEW----I--FPIPDVVRGLYIAIDHFT-----PAQ---SKVIVPTPAYPPFFHLLSATQ 126 (377)
T ss_dssp CCHHHHHHHHHHHHHCCCCCGGG----E--EEESCHHHHHHHHHHHHS-----CTT---CCEEEEESCCTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCCCHHH----E--EEeCChHHHHHHHHHHhc-----CCC---CEEEEcCCCcHhHHHHHHHcC
Confidence 567777788888777754 443 6 899999999999999875 367 899999999999999999999
Q ss_pred cEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccchhhhhhhhcC
Q 013675 248 IKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLG 324 (438)
Q Consensus 248 i~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g 324 (438)
++++.+|++++ +|+++++++++++++++++++|+||||.+.| +++|+++|++||+++++|++|+++... |
T Consensus 127 ~~~~~~~~~~~--~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-----g 199 (377)
T 3fdb_A 127 REGIFIDATGG--INLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFD-----G 199 (377)
T ss_dssp CCEEEEECTTS--CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSS-----S
T ss_pred CEEEEccCCCC--CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcC-----C
Confidence 99999999876 9999999999999999999999999999976 667778899999999999999875431 1
Q ss_pred -CCCCCC-ccCCCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHH
Q 013675 325 -YPIPPF-DFSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAAL 401 (438)
Q Consensus 325 -~~~p~~-~~~~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal 401 (438)
...+++ .....+.+++..+++|.+. .+.++|+++..++++........ .+. .++-+....+++.+++
T Consensus 200 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~a~~~~l 269 (377)
T 3fdb_A 200 QHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLS-PVI---------KDGASTLGLIAAEAAY 269 (377)
T ss_dssp CCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSC-HHH---------HCCCCHHHHHHHHHHH
T ss_pred CCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHH-Hhh---------cCCCCHHHHHHHHHHH
Confidence 100011 1111234588889999952 33457877776655443211100 000 0011111122333344
Q ss_pred HHHcHHHHHHHHHHHHHHHHHHHHHhhc-CCCccc
Q 013675 402 MSLGQEGYLENTKAIMEVSESIQKGLVL-FPMFLP 435 (438)
Q Consensus 402 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~ 435 (438)
. .+.+.+++..++..++++++.+.|++ +|++++
T Consensus 270 ~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 303 (377)
T 3fdb_A 270 R-YGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKI 303 (377)
T ss_dssp H-HCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred h-ccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceE
Confidence 3 23566788899999999999999988 788764
No 99
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.84 E-value=1e-19 Score=182.12 Aligned_cols=230 Identities=13% Similarity=0.032 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEE
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLW 251 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~ 251 (438)
...++++.+++++|.+ + + ++|+|||+|+.++++++. ..+| ++|+++.++|+++..+++..|++++
T Consensus 33 ~~~~l~~~la~~~~~~--~----v--~~~~ggt~al~~~~~~l~----~~~g---d~Vl~~~~~~~~~~~~~~~~g~~~~ 97 (394)
T 1o69_A 33 FVNRFEQSVKDYSKSE--N----A--LALNSATAALHLALRVAG----VKQD---DIVLASSFTFIASVAPICYLKAKPV 97 (394)
T ss_dssp HHHHHHHHHHHHHCCS--E----E--EEESCHHHHHHHHHHHTT----CCTT---CEEEEESSSCGGGTHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhCCC--c----E--EEeCCHHHHHHHHHHHcC----CCCC---CEEEECCCccHHHHHHHHHcCCEEE
Confidence 3445666788888873 2 4 899999999999999872 1356 8999999999999999999999999
Q ss_pred EeeCCCCCccCHHHHHHhhcc---CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCC
Q 013675 252 RVPVDKEFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIP 328 (438)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~I~~---~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p 328 (438)
.+|+++++.+|++++++++++ +|++|++++ ++|...|+++|.++|+++|+++++|++|+.+..+ . +.
T Consensus 98 ~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~---~~--- 167 (394)
T 1o69_A 98 FIDCDETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFY-K---NK--- 167 (394)
T ss_dssp EECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEE-T---TE---
T ss_pred EEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCccccee-C---Cc---
Confidence 999988889999999999987 799998886 6999999999999999999999999999732221 0 11
Q ss_pred CCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhccccc-CCCccCCCCccCCCCCchHHHHHHHHHHHcHH
Q 013675 329 PFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEW-SGGLYVSPTVAGSRPGGLIAGAWAALMSLGQE 407 (438)
Q Consensus 329 ~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~-~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~ 407 (438)
+. ....++|+.+++.||. ++|.++|+++.+++++.+........+ ...........|.+.+..-..+.+++.. .+
T Consensus 168 ~~-~~~~~~~~~s~s~~K~-l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--l~ 243 (394)
T 1o69_A 168 AL-GTFGEFGVYSYNGNKI-ITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQ--ME 243 (394)
T ss_dssp ET-TSSSSEEEEECCTTSS-SCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHH--HT
T ss_pred cc-ccccCcEEEEEeCCcc-CCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHH--HH
Confidence 00 0113589999999997 678889998887655443221111111 0111111122344443332233333322 24
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Q 013675 408 GYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 408 g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
.+++..++..++++++.+.|+++
T Consensus 244 ~l~~~~~~~~~~~~~l~~~L~~~ 266 (394)
T 1o69_A 244 VLEQRVLKKREIYEWYKEFLGEY 266 (394)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 46778899999999999999875
No 100
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.84 E-value=6.6e-20 Score=181.13 Aligned_cols=226 Identities=13% Similarity=0.057 Sum_probs=167.0
Q ss_pred HHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEee
Q 013675 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (438)
Q Consensus 175 ~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~ 254 (438)
++++.+++++|.++++ + ++|+|+|+++.++++++. ++| ++|+++.++|.++...++..|++++.+|
T Consensus 69 ~lr~~la~~~~~~~~~----v--~~~~g~~~a~~~~~~~l~-----~~g---d~vl~~~~~~~~~~~~~~~~g~~~~~v~ 134 (365)
T 3get_A 69 ELKSTLAQKYKVQNEN----I--IIGAGSDQVIEFAIHSKL-----NSK---NAFLQAGVTFAMYEIYAKQCGAKCYKTQ 134 (365)
T ss_dssp HHHHHHHHHHTCCGGG----E--EEESSHHHHHHHHHHHHC-----CTT---CEEEECSSCCTHHHHHHHHHTCEEEECS
T ss_pred HHHHHHHHHhCCCcce----E--EECCCHHHHHHHHHHHHh-----CCC---CEEEEeCCChHHHHHHHHHcCCEEEEEe
Confidence 5666788899987665 6 899999999999999875 367 8999999999999999999999999999
Q ss_pred C-CCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHH--HcCCeEEEeccccchhh--hhhhhcCCCCCC
Q 013675 255 V-DKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELAL--SHGTCLHVDLCLGGFVL--PFAKKLGYPIPP 329 (438)
Q Consensus 255 ~-~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~--~~~i~lhVD~a~gg~~~--pf~~~~g~~~p~ 329 (438)
+ ++++ +|+++++++++++|++|++++|+||||.+.|++++.++++ ++|+++++|++|+.+.. . .... .+.
T Consensus 135 ~~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~--~~~~--~~~ 209 (365)
T 3get_A 135 SITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKD--SKKH--LEP 209 (365)
T ss_dssp SSSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHC--GGGC--CCH
T ss_pred cCCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccC--Cccc--ccH
Confidence 8 5688 9999999999999999999999999999999999988888 67999999999987652 1 0000 000
Q ss_pred Cc-cCCCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHH
Q 013675 330 FD-FSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQE 407 (438)
Q Consensus 330 ~~-~~~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~ 407 (438)
.. ....+.++++.++||++. .+.++|+++. ++++..........| +-+....+++.++++ ..+
T Consensus 210 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~l~--~~~ 274 (365)
T 3get_A 210 CELIKEFDNVLYLGTFSKLYGLGGLRIGYGIA-NANIISAFYKLRAPF------------NVSNLALKAAVAAMD--DDE 274 (365)
T ss_dssp HHHHHHCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHHHHHHHHSCTT------------CSCHHHHHHHHHHHT--CHH
T ss_pred hHHhccCCCEEEEeecchHhcCcchheEEEEc-CHHHHHHHHHhcCCC------------CcCHHHHHHHHHHhC--CHH
Confidence 11 112345788889999953 4455898877 444433221111111 111111223334443 236
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 408 GYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 408 g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
++++..++..++++++.+.|+++ ++++
T Consensus 275 ~~~~~~~~~~~~~~~l~~~l~~~-g~~~ 301 (365)
T 3get_A 275 FTEKTLENNFSQMELYKEFAKKH-NIKI 301 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCEE
Confidence 78888899999999999999887 6543
No 101
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.84 E-value=3.5e-20 Score=187.81 Aligned_cols=227 Identities=15% Similarity=0.106 Sum_probs=162.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH----HHhhcCc
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK----AAQYFNI 248 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~----a~~~~Gi 248 (438)
..++++.+++++|.+. . +++++|++|+.++++++. ++| ++|+++.+.|.+... .+..+|+
T Consensus 84 ~~~le~~lA~l~g~~~-~-------v~~~sG~~Ai~~al~al~-----~~G---d~Vi~~~~~y~~~~~~~~~~~~~~G~ 147 (430)
T 3ri6_A 84 VEDLEQRLKNLTGALG-V-------LALGSGMAAISTAILTLA-----RAG---DSVVTTDRLFGHTLSLFQKTLPSFGI 147 (430)
T ss_dssp HHHHHHHHHHHHTCSE-E-------EEESCHHHHHHHHHHHHC-----CTT---CEEEEETTCCHHHHHHHHTHHHHTTC
T ss_pred HHHHHHHHHHHHCCCc-E-------EEECCHHHHHHHHHHHHh-----CCC---CEEEEcCCCchhHHHHHHHHHHHcCC
Confidence 3445557888998863 2 677788999999998875 367 899999999998777 6678899
Q ss_pred EEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCC
Q 013675 249 KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIP 328 (438)
Q Consensus 249 ~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p 328 (438)
+++.+|.+ |+++++++|+++|++|++++|+||+|.+.|+++|+++|+++|+++++|++++.+..
T Consensus 148 ~~~~v~~~-----d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~----------- 211 (430)
T 3ri6_A 148 EVRFVDVM-----DSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL----------- 211 (430)
T ss_dssp EEEEECTT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT-----------
T ss_pred EEEEeCCC-----CHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----------
Confidence 99999976 89999999999999999999999999999999999999999999999999874332
Q ss_pred CCccCCCCccEEEeCCCCCCCCC--CCcEEEEEeccccccc--chhcccccCCCc-c------CCCCccCCCCCchHHHH
Q 013675 329 PFDFSVQGVTSISVDVHKYGLAP--KGTSVVLYRNREIRKH--QFVAVTEWSGGL-Y------VSPTVAGSRPGGLIAGA 397 (438)
Q Consensus 329 ~~~~~~~gvdsis~s~hK~~~~p--~g~g~l~~r~~~~~~~--~~~~~~~~~g~~-~------~~~~~~gsr~~~~ia~~ 397 (438)
.+....|+|+++.|++|++.+| .-.|+++.+.+..... .+.....+.|.. + ......|..... ..+
T Consensus 212 -~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~--~~a 288 (430)
T 3ri6_A 212 -LEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSP--HNA 288 (430)
T ss_dssp -CCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCH--HHH
T ss_pred -CChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCH--HHH
Confidence 2234457899999999996544 1345555444321100 000000000000 0 000011222222 245
Q ss_pred HHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 013675 398 WAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLPP 436 (438)
Q Consensus 398 ~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 436 (438)
|.++ .|.+.+..+.++..++++++.+.|++.|+++.+
T Consensus 289 ~l~l--~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V 325 (430)
T 3ri6_A 289 YLQS--LGLETMALRIERSCQNAQELAHWLLSIPQVKCV 325 (430)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEE
T ss_pred HHHH--hhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEE
Confidence 5555 456778888899999999999999999887643
No 102
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.84 E-value=5.4e-20 Score=186.09 Aligned_cols=228 Identities=17% Similarity=0.123 Sum_probs=160.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHH----hhcC
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA----QYFN 247 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~----~~~G 247 (438)
...++++.+++++|.+. . +++++||+|+.++++++. ++| ++|+++...|.+....+ +..|
T Consensus 59 ~~~~l~~~la~~~g~~~-~-------v~~~sGt~A~~~~l~~~~-----~~g---d~vi~~~~~~~~~~~~~~~~~~~~g 122 (421)
T 2ctz_A 59 TVDVLEKRLAALEGGKA-A-------LATASGHAAQFLALTTLA-----QAG---DNIVSTPNLYGGTFNQFKVTLKRLG 122 (421)
T ss_dssp HHHHHHHHHHHHHTCSE-E-------EEESSHHHHHHHHHHHHC-----CTT---CEEEECSCCCHHHHHHHHTHHHHTT
T ss_pred HHHHHHHHHHHHhCCCc-e-------EEecCHHHHHHHHHHHHh-----CCC---CEEEEeCCCchHHHHHHHHHHHHcC
Confidence 34556667899998862 2 566667999999999874 366 89999999999987765 7789
Q ss_pred cEEEEe-eCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccc-cchhhhhhhhcCC
Q 013675 248 IKLWRV-PVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCL-GGFVLPFAKKLGY 325 (438)
Q Consensus 248 i~v~~v-~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~-gg~~~pf~~~~g~ 325 (438)
++++.+ +.+ |+++++++|+++|++|++++++||+|.+.|+++|+++|+++|+++++|+++ +.+..
T Consensus 123 ~~~~~~~~~~-----d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~-------- 189 (421)
T 2ctz_A 123 IEVRFTSREE-----RPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYL-------- 189 (421)
T ss_dssp CEEEECCTTC-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTS--------
T ss_pred CEEEEECCCC-----CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccc--------
Confidence 999999 764 899999999999999999999999999999999999999999999999999 53211
Q ss_pred CCCCCccCCCCccEEEeCCCCCCCCCCC-cEEEEEec--ccc----cccchhcccccCCCccC---------C------C
Q 013675 326 PIPPFDFSVQGVTSISVDVHKYGLAPKG-TSVVLYRN--REI----RKHQFVAVTEWSGGLYV---------S------P 383 (438)
Q Consensus 326 ~~p~~~~~~~gvdsis~s~hK~~~~p~g-~g~l~~r~--~~~----~~~~~~~~~~~~g~~~~---------~------~ 383 (438)
..++ ..++|+++.++||++.+|.+ .|++++++ +++ ..........|.+..+. . .
T Consensus 190 -~~~~---~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~ 265 (421)
T 2ctz_A 190 -LRPL---AWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGL 265 (421)
T ss_dssp -CCGG---GGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHH
T ss_pred -CCcc---ccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHH
Confidence 1122 24689999999999766653 67667753 222 11100011112221100 0 0
Q ss_pred CccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 013675 384 TVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLPP 436 (438)
Q Consensus 384 ~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 436 (438)
...|.+.... .+|+++. +.+.+.++.++..++++++.+.|+++|+++..
T Consensus 266 ~~~g~~~~~~--~a~~~~~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v 314 (421)
T 2ctz_A 266 RDQGQALGPF--EAWVVLL--GMETLSLRAERHVENTLHLAHWLLEQPQVAWV 314 (421)
T ss_dssp HHHCCCCCHH--HHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred HhcCCCCCHH--HHHHHHc--CcchHHHHHHHHHHhHHHHHHHHHhCCCeeEE
Confidence 0012222222 4455543 34456667777789999999999999987653
No 103
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.84 E-value=2.8e-20 Score=190.91 Aligned_cols=235 Identities=12% Similarity=0.078 Sum_probs=155.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCCCCcc-ceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHH------
Q 013675 168 SVARFEAEVIAMTAALLGNKEKASGGQV-CGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD------ 240 (438)
Q Consensus 168 ~~~~~e~~~~~~~a~l~g~~~~~~~~~v-~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~------ 240 (438)
...++|+.+++++++++|.+.++ . +-+++++||+||..++.++. ++| |+|+++...|.+..
T Consensus 97 ~~~~lE~~a~~~~a~l~g~~~~~----~~~~v~~~sGt~An~~al~al~-----~pG---D~Vl~~~~~h~g~l~h~~~~ 164 (490)
T 2a7v_A 97 VVDEIELLCQRRALEAFDLDPAQ----WGVNVQPYSGSPANLAVYTALL-----QPH---DRIMGLDLPDGGHLTHGYMS 164 (490)
T ss_dssp -CTHHHHHHHHHHHHHTTCCTTT----EEEECCCSSHHHHHHHHHHHHC-----CSC---EECCC---------------
T ss_pred HHHHHHHHHHHHHHHHcCCCccc----CceEEeCCchHHHHHHHHHHHc-----CCC---CEecccCccccccccchhhh
Confidence 34578889999999999998753 1 12567799999999999886 378 99999998876532
Q ss_pred --HHHhhcCcEE--EEeeCC-CCCccCHHHHHHhhc-cCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccc
Q 013675 241 --KAAQYFNIKL--WRVPVD-KEFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGG 314 (438)
Q Consensus 241 --~a~~~~Gi~v--~~v~~~-~~~~~d~~~Le~~I~-~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg 314 (438)
+.+...|..+ +.++++ +++.+|++++++++. .+|++|+++.+++| ...|+++|+++|++||+++|+|++++.
T Consensus 165 ~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~ 242 (490)
T 2a7v_A 165 DVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHIS 242 (490)
T ss_dssp ----------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECGGGH
T ss_pred cchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC--CcccHHHHHHHHHHcCCEEEEcccccc
Confidence 1334556544 444555 478999999999996 47888888777664 577999999999999999999999865
Q ss_pred hhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEeccc--------------ccccchhcccccCCCcc
Q 013675 315 FVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNRE--------------IRKHQFVAVTEWSGGLY 380 (438)
Q Consensus 315 ~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~--------------~~~~~~~~~~~~~g~~~ 380 (438)
.++. .|. . +..+ .++|++++++||++.+|.| |+++.+++. +.+. ... .
T Consensus 243 glv~----~g~-~-~~~~--~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~~~~~~l~~~-i~~--------~ 304 (490)
T 2a7v_A 243 GLVA----AKV-I-PSPF--KHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDR-INF--------A 304 (490)
T ss_dssp HHHH----TTS-S-CCGG--GTCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEEEEECCCHHH-HHH--------H
T ss_pred cccc----CCc-C-CCCC--CCCCEEEECCcccCccccc-hheeeccchhcccccccchhhHHHHHH-HHH--------H
Confidence 4432 121 1 1112 3689999999999778887 888887641 1111 000 0
Q ss_pred CCCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 381 VSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 381 ~~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
..+...|+.....++++.+++...-.+.+++..++..++++++++.|++. |+++
T Consensus 305 ~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v 358 (490)
T 2a7v_A 305 VFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSL 358 (490)
T ss_dssp HTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred hcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEE
Confidence 01122334444456677777766544567888999999999999999886 6654
No 104
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.84 E-value=2.4e-20 Score=201.17 Aligned_cols=230 Identities=14% Similarity=0.089 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEE
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~ 252 (438)
..+.++.+++++|.+.. + ++++|+|+|+..++.++. ++| |+|+++.+.|.++..++...|++++.
T Consensus 207 v~~~ee~la~l~G~d~~-----i--~~~~Gtt~a~~~~i~al~-----~~G---D~Vlv~~~~h~s~~~~~~~~G~~~v~ 271 (755)
T 2vyc_A 207 FGESEKYAARVFGADRS-----W--SVVVGTSGSNRTIMQACM-----TDN---DVVVVDRNCHKSIEQGLMLTGAKPVY 271 (755)
T ss_dssp HHHHHHHHHHHHTCSEE-----E--EESSHHHHHHHHHHHHHC-----CTT---CEEEEESSCCHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHhCCCce-----E--EECCcHHHHHHHHHHHhc-----CCC---CEEEECCCchHHHHHHHHHcCCEEEE
Confidence 44567789999998743 3 788888899999999976 377 99999999999999999999999999
Q ss_pred eeCCCC-----Ccc-----CHHHHHHhhcc--CcE--------EEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 253 VPVDKE-----FRA-----DVKAIKKYINR--NTV--------LIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 253 v~~~~~-----~~~-----d~~~Le~~I~~--~t~--------~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++.+.+ +.+ |+++|+++|++ +++ ++++++| |++|.+.|+++|+++|++||+++|+|++|
T Consensus 272 v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~ 350 (755)
T 2vyc_A 272 MVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAW 350 (755)
T ss_dssp ECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTT
T ss_pred EeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcC
Confidence 998643 345 99999999975 344 8889998 57999999999999999999999999999
Q ss_pred cchhhhhhhhcCCCCCCCccCCCC--ccE------EEeCCCCCCCCCCCcEEEEEecc--cccccchhcccccCCCccCC
Q 013675 313 GGFVLPFAKKLGYPIPPFDFSVQG--VTS------ISVDVHKYGLAPKGTSVVLYRNR--EIRKHQFVAVTEWSGGLYVS 382 (438)
Q Consensus 313 gg~~~pf~~~~g~~~p~~~~~~~g--vds------is~s~hK~~~~p~g~g~l~~r~~--~~~~~~~~~~~~~~g~~~~~ 382 (438)
++... |..... +.... .+ +|+ ++.|+||++.+|.++|+++++++ .+....+......
T Consensus 351 ~~~~~-~~~~~~----~~~~~-~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~------- 417 (755)
T 2vyc_A 351 YGYAR-FNPIYA----DHYAM-RGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMM------- 417 (755)
T ss_dssp CTTGG-GCGGGT----TSSSS-CSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHH-------
T ss_pred chhcc-cCcccC----Ccchh-cCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHH-------
Confidence 76432 211110 01111 34 555 99999999888888999988876 2211111110000
Q ss_pred CCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 013675 383 PTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPM 432 (438)
Q Consensus 383 ~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g 432 (438)
...++.+...++++-++++.+..+|..+..++..+++++++++|+++++
T Consensus 418 -~~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 418 -HATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp -TSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 1113334455778888888887776678899999999999999998776
No 105
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.84 E-value=1.1e-19 Score=182.96 Aligned_cols=214 Identities=19% Similarity=0.160 Sum_probs=158.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH----HHhhcC
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK----AAQYFN 247 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~----a~~~~G 247 (438)
..+++++.+++++|.+ . + ++++||++|+.++++++. ++| ++|+++.+.|+++.. .++..|
T Consensus 63 ~~~~l~~~ia~~~g~~-~-----~--i~~~~g~~ai~~~~~~l~-----~~g---d~Vl~~~~~y~~~~~~~~~~~~~~g 126 (404)
T 1e5e_A 63 TVSNLEGKIAFLEKTE-A-----C--VATSSGMGAIAATVLTIL-----KAG---DHLISDECLYGCTHALFEHALTKFG 126 (404)
T ss_dssp HHHHHHHHHHHHHTCS-E-----E--EEESSHHHHHHHHHHHHC-----CTT---CEEEEESCCCHHHHHHHHTHHHHTT
T ss_pred HHHHHHHHHHHHhCCC-c-----E--EEeCChHHHHHHHHHHHh-----CCC---CEEEEeCCCchhHHHHHHHHHHHcC
Confidence 3445667788889886 2 3 788888999999999875 367 899999999999888 788899
Q ss_pred cEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHH-cCCeEEEeccccchhhhhhhhcCCC
Q 013675 248 IKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALS-HGTCLHVDLCLGGFVLPFAKKLGYP 326 (438)
Q Consensus 248 i~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~-~~i~lhVD~a~gg~~~pf~~~~g~~ 326 (438)
++++.+|.+ |+++++++++++|++|++++|+||+|.+.|+++|+++|++ +|+++++|++|+.+...
T Consensus 127 ~~~~~v~~~-----d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~-------- 193 (404)
T 1e5e_A 127 IQVDFINTA-----IPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMIT-------- 193 (404)
T ss_dssp CEEEEECTT-----STTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTC--------
T ss_pred CEEEEECCC-----CHHHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhC--------
Confidence 999999976 8999999999999999999999999999999999999999 99999999999876531
Q ss_pred CCCCccCCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHH
Q 013675 327 IPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL 404 (438)
Q Consensus 327 ~p~~~~~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~ 404 (438)
. +++ .++|+++.++||++.+|.+ +|+++.+++.+.+........|. |.... ...+|+++..+
T Consensus 194 ~-~~~---~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~----------g~~~~--~~~~~~~~~~l 257 (404)
T 1e5e_A 194 N-PVD---FGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDIT----------GSVIS--PHDAWLITRGL 257 (404)
T ss_dssp C-GGG---GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCC----------CCCCC--HHHHHHHHHHH
T ss_pred C-ccc---cCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCC----------CCCCC--HHHHHHHHHhH
Confidence 1 222 3789999999999767766 58888775433312111111110 11111 22566665544
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 013675 405 GQEGYLENTKAIMEVSESIQKGLVLFPM 432 (438)
Q Consensus 405 g~~g~~~~~~~~~~~a~~l~~~L~~~~g 432 (438)
. .+..+.++..++++.+.+.|++.+.
T Consensus 258 ~--~~~~~~~~~~~~~~~l~~~l~~~~~ 283 (404)
T 1e5e_A 258 S--TLNIRMKAESENAMKVAEYLKSHPA 283 (404)
T ss_dssp T--THHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred h--HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 2455566667777777777776653
No 106
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.84 E-value=4e-21 Score=189.24 Aligned_cols=234 Identities=15% Similarity=0.064 Sum_probs=167.4
Q ss_pred chhHHHHHHHHHHHHHHHhCCCC-CCCCCccceeEcCCh-HHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKE-KASGGQVCGNMTSGG-TESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA 243 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~-~~~~~~v~g~~t~gg-t~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~ 243 (438)
.++..++.+++++++++++|.+. ++ + ++|+|+ |+|+.+++.++.... ++| ++|+++...|++. ..+
T Consensus 43 ~~~~~~~~~~l~~~la~~~g~~~~~~----v--~~~~g~gt~al~~~~~~l~~~~--~~g---~~vi~~~~~~~~~-~~~ 110 (360)
T 1w23_A 43 SQSYEEVHEQAQNLLRELLQIPNDYQ----I--LFLQGGASLQFTMLPMNLLTKG--TIG---NYVLTGSWSEKAL-KEA 110 (360)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTTEE----E--EEESSHHHHHHHHHHHHHCCTT--CEE---EEEECSHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCce----E--EEECCcchHHHHHHHHHhcCCC--Ccc---cEEEecchhHHHH-HHH
Confidence 56777788899999999999973 33 5 889998 999999988875310 123 6788888888764 346
Q ss_pred hhcCcEEEEeeCCC-CCccCHHHHHH-hhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhh
Q 013675 244 QYFNIKLWRVPVDK-EFRADVKAIKK-YINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 244 ~~~Gi~v~~v~~~~-~~~~d~~~Le~-~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~ 321 (438)
+.+| +++.+|+++ ++.+|++++++ +++++|++|++++++||||.+.| +++++||+++++|++++.+..|
T Consensus 111 ~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~--- 181 (360)
T 1w23_A 111 KLLG-ETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRP--- 181 (360)
T ss_dssp HTTS-EEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSC---
T ss_pred HHhC-CeEEeecccccCcCCccchHhhccCCCCCEEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCCC---
Confidence 7789 999999986 67799999999 99989999999999999999965 3334899999999998754432
Q ss_pred hcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCc-cC--CCCccCCCCCchHHHHH
Q 013675 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGL-YV--SPTVAGSRPGGLIAGAW 398 (438)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~-~~--~~~~~gsr~~~~ia~~~ 398 (438)
++... .|+++.++||+ ++|.|+|+++.+++...... ... .|.... .. .....++.+...++++.
T Consensus 182 --------~~~~~--~di~~~s~sK~-~~~~G~G~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (360)
T 1w23_A 182 --------LKVNQ--FGMIYAGAQKN-LGPSGVTVVIVKKDLLNTKV-EQV-PTMLQYATHIKSDSLYNTPPTFSIYMLR 248 (360)
T ss_dssp --------CCGGG--CSEEEEETTTT-TSCTTCEEEEEEHHHHCSCC-TTC-CGGGCHHHHHHTTTCSSCCCHHHHHHHH
T ss_pred --------cCccc--CCEEEEEcccc-cCCCCcEEEEEcHHHHhhcc-cCC-cchhhhhhhhhccCCCCCCCHHHHHHHH
Confidence 22222 38999999998 57889999888755332111 100 110000 00 00111233333345666
Q ss_pred HHHHHHcHH-HHHHHHHHHHHHHHHHHHHhhcCCCc
Q 013675 399 AALMSLGQE-GYLENTKAIMEVSESIQKGLVLFPMF 433 (438)
Q Consensus 399 aal~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~g~ 433 (438)
++++.+... +++++.++..++++++.+.|++++++
T Consensus 249 ~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 284 (360)
T 1w23_A 249 NVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGF 284 (360)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTS
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 777766555 78899999999999999999988754
No 107
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.84 E-value=2.1e-19 Score=180.12 Aligned_cols=230 Identities=17% Similarity=0.045 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEE
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~ 252 (438)
..++++.+++++|.+ + + +++++||+|+.+++++++. ++| ++|+++.++|+++..+++..|++++.
T Consensus 65 ~~~l~~~la~~~~~~--~----~--v~~~~Gt~a~~~~l~~~~~----~~g---d~vl~~~~~~~~~~~~~~~~g~~~~~ 129 (399)
T 2oga_A 65 LEGFEAEFAAYCETD--H----A--VGVNSGMDALQLALRGLGI----GPG---DEVIVPSHTYIASWLAVSATGATPVP 129 (399)
T ss_dssp HHHHHHHHHHHTTSS--E----E--EEESCHHHHHHHHHHHTTC----CTT---CEEEEESSSCTHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCC--e----E--EEecCHHHHHHHHHHHhCC----CCc---CEEEECCCccHHHHHHHHHCCCEEEE
Confidence 345566788888876 2 3 7889999999999998721 256 89999999999999999999999999
Q ss_pred eeCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCc
Q 013675 253 VPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (438)
Q Consensus 253 v~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~ 331 (438)
+|+++ ++.+|+++++++++++|++|+ ++||+|.+.|+++|.++|+++|+++++|++++.+... . +. ++
T Consensus 130 ~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~--~--~~---~~- 198 (399)
T 2oga_A 130 VEPHEDHPTLDPLLVEKAITPRTRALL---PVHLYGHPADMDALRELADRHGLHIVEDAAQAHGARY--R--GR---RI- 198 (399)
T ss_dssp ECBCSSSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEE--T--TE---ET-
T ss_pred EecCCCCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCcc--C--Ce---ec-
Confidence 99987 688999999999998898877 4678999999999999999999999999999754321 0 10 11
Q ss_pred cCCCCccEEEeCCC--CCCCCCC-CcEEEEEecccccccchh-cccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHH
Q 013675 332 FSVQGVTSISVDVH--KYGLAPK-GTSVVLYRNREIRKHQFV-AVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQE 407 (438)
Q Consensus 332 ~~~~gvdsis~s~h--K~~~~p~-g~g~l~~r~~~~~~~~~~-~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~ 407 (438)
. .-.|++++++| |++ +|+ .+|+++.+++++.+.... ....+.. .+. ....|........++++++..+ +
T Consensus 199 -~-~~~di~~~S~~~sK~~-~~~G~~g~~~~~~~~~~~~l~~~~~~g~~~-~~~-~~~~g~~~~~~~~~~a~~~~~l--~ 271 (399)
T 2oga_A 199 -G-AGSSVAAFSFYPGKNL-GCFGDGGAVVTGDPELAERLRMLRNYGSRQ-KYS-HETKGTNSRLDEMQAAVLRIRL--A 271 (399)
T ss_dssp -T-CTTCEEEEECCTTSSS-CCSSCCEEEEESCHHHHHHHHHHHBTTCSS-TTC-CCSCCCBCCCCHHHHHHHHHHH--H
T ss_pred -c-cccCEEEEeCCCCccC-CcCCceEEEEeCCHHHHHHHHHHHhcCccc-ccc-ccccccCCCcCHHHHHHHHHHH--H
Confidence 1 11488888885 985 554 467777665555432111 1111100 010 1111211111122344433322 4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 408 GYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 408 g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+++..++..++++++.+.|+++|++++
T Consensus 272 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 299 (399)
T 2oga_A 272 HLDSWNGRRSALAAEYLSGLAGLPGIGL 299 (399)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTCTTCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 4566778888899999999999888765
No 108
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.84 E-value=4.1e-20 Score=183.33 Aligned_cols=238 Identities=16% Similarity=0.093 Sum_probs=167.7
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHh-CCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc
Q 013675 160 PLHLDIFQSVARFEAEVIAMTAALL-GNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (438)
Q Consensus 160 ~~~~~~~~~~~~~e~~~~~~~a~l~-g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s 238 (438)
...+...++..++++ .+++++ +.++++ + ++|+|||+|+.++++++. ++| ++|+++.+.|.+
T Consensus 56 ~~~y~~~~g~~~l~~----~la~~~~~~~~~~----v--~~~~g~~~a~~~~~~~l~-----~~g---d~Vl~~~~~~~~ 117 (375)
T 3op7_A 56 KLNYGWIEGSPAFKK----SVSQLYTGVKPEQ----I--LQTNGATGANLLVLYSLI-----EPG---DHVISLYPTYQQ 117 (375)
T ss_dssp CCSSCCTTCCHHHHH----HHHTTSSSCCGGG----E--EEESHHHHHHHHHHHHHC-----CTT---CEEEEEESSCTH
T ss_pred CcCCCCCCChHHHHH----HHHHHhccCChhh----E--EEcCChHHHHHHHHHHhc-----CCC---CEEEEeCCCchh
Confidence 344444455555555 466665 455554 5 899999999999999875 367 899999999999
Q ss_pred HHHHHhhcCcEEEEeeCCC--CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEecccc
Q 013675 239 YDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v~~~~--~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~g 313 (438)
+...++..|.+++.+|+++ ++.+|+++++++++++|++|++++|+||+|.+.| +++|.++|++||+++++|++|+
T Consensus 118 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~ 197 (375)
T 3op7_A 118 LYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYR 197 (375)
T ss_dssp HHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred HHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 9999999999999999874 5679999999999999999999999999999999 9999999999999999999998
Q ss_pred chhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCc
Q 013675 314 GFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG 392 (438)
Q Consensus 314 g~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~ 392 (438)
++... + .+.. ....+.+++..+++|.+. .+.++|+++. ++++.+........+. . +.+..
T Consensus 198 ~~~~~-----~--~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~~~~~~~~~~~~--------~--~~~~~ 258 (375)
T 3op7_A 198 SFSEL-----D--VPSI-IEVYDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVTDILRDYRDYTM--------I--CAGVF 258 (375)
T ss_dssp CCSSS-----C--CCCH-HHHCTTEEEEEESSSSSSCGGGCCEEEEC-CHHHHHHHTTTGGGTT--------S--CCCHH
T ss_pred ccccc-----C--CCch-hhhcCCEEEEeEChhhcCCcccceEEEEe-CHHHHHHHHHHHhhhc--------c--CCCcH
Confidence 75431 1 1111 122345678888999953 3344688776 4544432211111000 0 00111
Q ss_pred hHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 393 LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 393 ~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
..+++..++.. ..+.+++..++..++++++.+.|++.|++++
T Consensus 259 ~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 300 (375)
T 3op7_A 259 DDLVAQLALAH-YQEILERNRHILEENLAILDQWIEEEPLVSY 300 (375)
T ss_dssp HHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHhhCCCceE
Confidence 12223333432 2345667777778899999999988877654
No 109
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.84 E-value=1.7e-19 Score=178.33 Aligned_cols=223 Identities=13% Similarity=0.082 Sum_probs=162.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEe
Q 013675 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v 253 (438)
.++++.+++++|.++++ + ++|+|+|+++.++++++ +| ++|+++.++|.++...++..|.+++.+
T Consensus 62 ~~l~~~la~~~~~~~~~----v--~~~~g~~~al~~~~~~~-------~g---d~vl~~~p~y~~~~~~~~~~g~~~~~v 125 (364)
T 1lc5_A 62 FHLHQALARHHQVPASW----I--LAGNGETESIFTVASGL-------KP---RRAMIVTPGFAEYGRALAQSGCEIRRW 125 (364)
T ss_dssp HHHHHHHHHHHTSCGGG----E--EEESSHHHHHHHHHHHH-------CC---SEEEEEESCCTHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHCcCHHH----E--EECCCHHHHHHHHHHHc-------CC---CeEEEeCCCcHHHHHHHHHcCCeEEEE
Confidence 35566788888887665 6 89999999999999886 34 789999999999999999999999999
Q ss_pred eCCCCCccC-HHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCC
Q 013675 254 PVDKEFRAD-VKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPP 329 (438)
Q Consensus 254 ~~~~~~~~d-~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~ 329 (438)
|.+++..++ ++++.+.+++++++|++++|+||||.+.| +++|+++|++||+++++|++|+++... + .+.
T Consensus 126 ~~~~~~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-----~--~~~ 198 (364)
T 1lc5_A 126 SLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPH-----E--TGF 198 (364)
T ss_dssp ECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTT-----C--CCS
T ss_pred eCCcccccchhHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccC-----c--cch
Confidence 997522233 57677777778999999999999999988 899999999999999999999876531 1 111
Q ss_pred Ccc-CCCCccEEEeCCCCCCCCCC--CcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHc-
Q 013675 330 FDF-SVQGVTSISVDVHKYGLAPK--GTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG- 405 (438)
Q Consensus 330 ~~~-~~~gvdsis~s~hK~~~~p~--g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g- 405 (438)
++. ...+.++++.++||++ +++ .+|++++.++++.+........| + ....+++++...+.
T Consensus 199 ~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~l~~~~~~~------------~---~~~~~~~~~~~~l~~ 262 (364)
T 1lc5_A 199 IPALKDNPHIWVLRSLTKFY-AIPGLRLGYLVNSDDAAMARMRRQQMPW------------S---VNALAALAGEVALQD 262 (364)
T ss_dssp GGGCTTCTTEEEEEESTTTT-TCTTTCCEEEECCCHHHHHHHHHHSCTT------------C---SCHHHHHHHHHGGGC
T ss_pred hhHhccCCCEEEEEECchhh-cCCccceEEEEECCHHHHHHHHHhCCCC------------C---CCHHHHHHHHHHHhC
Confidence 222 2346789999999995 433 47987734455433221111111 0 11224444444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 406 QEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 406 ~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+.+++..++..++++++.+.|+++|++++
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 292 (364)
T 1lc5_A 263 SAWQQATWHWLREEGARFYQALCQLPLLTV 292 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 256778888889999999999998888764
No 110
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.84 E-value=8.3e-20 Score=182.78 Aligned_cols=214 Identities=16% Similarity=0.102 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH----HhhcC
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA----AQYFN 247 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a----~~~~G 247 (438)
...++++.+++++|.+ . . +++++|++|+.++++++. ++| ++|+++.+.|.+.... ++.+|
T Consensus 60 ~~~~l~~~la~~~g~~-~-----~--i~~~sG~~ai~~~~~~~~-----~~g---d~vl~~~~~y~~~~~~~~~~~~~~g 123 (389)
T 3acz_A 60 TVEQFEEMVCSIEGAA-G-----S--AAFGSGMGAISSSTLAFL-----QKG---DHLIAGDTLYGCTVSLFTHWLPRFG 123 (389)
T ss_dssp HHHHHHHHHHHHHTCS-E-----E--EEESSHHHHHHHHHTTTC-----CTT---CEEEEESSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCC-e-----E--EEeCCHHHHHHHHHHHHh-----CCC---CEEEEeCCCchHHHHHHHHHHHHcC
Confidence 3455666789999986 3 2 677889999999998764 266 8999999999987665 57789
Q ss_pred cEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCC
Q 013675 248 IKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPI 327 (438)
Q Consensus 248 i~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~ 327 (438)
++++.+|.+ |+++++++|+++|++|++++|+||+|.+.|+++|+++|+++|+++++|++|+.+.. + .
T Consensus 124 ~~~~~v~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~------~--~ 190 (389)
T 3acz_A 124 IEVDLIDTS-----DVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCF------L--K 190 (389)
T ss_dssp CEEEEECTT-----CHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT------C--C
T ss_pred CEEEEECCC-----CHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc------c--C
Confidence 999999873 89999999999999999999999999999999999999999999999999976542 0 1
Q ss_pred CCCccCCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHc
Q 013675 328 PPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG 405 (438)
Q Consensus 328 p~~~~~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g 405 (438)
+++ .++|+++.++||++.+|.+ .|+++.+++++.+........| | .... ...+|+++..+
T Consensus 191 -~~~---~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~-g----------~~~~--~~~~~~~~~~l- 252 (389)
T 3acz_A 191 -PLE---LGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDA-G----------SLMA--PMDAFLCARGM- 252 (389)
T ss_dssp -GGG---TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHH-C----------CCCC--HHHHHHHHHHH-
T ss_pred -ccc---cCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhc-C----------CCCC--HHHHHHHHcCc-
Confidence 233 4789999999999777776 6888877524432211111111 1 1111 22566666444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 013675 406 QEGYLENTKAIMEVSESIQKGLVLFPMF 433 (438)
Q Consensus 406 ~~g~~~~~~~~~~~a~~l~~~L~~~~g~ 433 (438)
+.+..+.++..++++.+.+.|++.+.+
T Consensus 253 -~~l~~r~~~~~~~~~~l~~~l~~~~~v 279 (389)
T 3acz_A 253 -KTLPIRMQIHMENGLKVAKFLEQHEKI 279 (389)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 344556667777888888888776543
No 111
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.7e-20 Score=191.08 Aligned_cols=241 Identities=16% Similarity=0.177 Sum_probs=173.7
Q ss_pred CcccchhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcH
Q 013675 162 HLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY 239 (438)
Q Consensus 162 ~~~~~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~ 239 (438)
+|....+..++++++.+++.+.+|.+ +++ + ++|+||++|+.++++++.+ +| ++|+++.+.|.++
T Consensus 90 ~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~----v--~~t~G~~~al~~~~~~l~~-----~g---d~Vlv~~p~y~~~ 155 (447)
T 3b46_A 90 QYSPTRGRPSLINSLIKLYSPIYNTELKAEN----V--TVTTGANEGILSCLMGLLN-----AG---DEVIVFEPFFDQY 155 (447)
T ss_dssp SCCCTTCCHHHHHHHHHHHTTTTTSCCCGGG----E--EEESHHHHHHHHHHHHHCC-----TT---CEEEEEESCCTTH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCChhh----E--EEeCCHHHHHHHHHHHHcC-----CC---CEEEEeCCCchhH
Confidence 34444566788888888888877764 333 6 8999999999999998753 67 8999999999999
Q ss_pred HHHHhhcCcEEEEeeCCC------------CCccCHHHHHHhhccCcEEEEEecCCCCCcccc---CHHHHHHHHHHcCC
Q 013675 240 DKAAQYFNIKLWRVPVDK------------EFRADVKAIKKYINRNTVLIVGSAPGFPHGIID---PIQELGELALSHGT 304 (438)
Q Consensus 240 ~~a~~~~Gi~v~~v~~~~------------~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~id---di~~I~~la~~~~i 304 (438)
...++..|.+++.+|+++ ++.+|+++|+++++++|++|++++|+||||.+. ++++|+++|++||+
T Consensus 156 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~ 235 (447)
T 3b46_A 156 IPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNV 235 (447)
T ss_dssp HHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCc
Confidence 999999999999999864 468999999999998999999999999999985 58999999999999
Q ss_pred eEEEeccccchhhhhhhhcCCCCCCC-cc--CCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCc
Q 013675 305 CLHVDLCLGGFVLPFAKKLGYPIPPF-DF--SVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGL 379 (438)
Q Consensus 305 ~lhVD~a~gg~~~pf~~~~g~~~p~~-~~--~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~ 379 (438)
++++|++|+++... |. .+++ .+ ...+.++++.++||+ +++.| +|+++.+++++.+........
T Consensus 236 ~li~De~~~~~~~~-----g~-~~~~~~~~~~~~~~~i~i~S~sK~-~~~~G~riG~~~~~~~~l~~~l~~~~~~----- 303 (447)
T 3b46_A 236 VIISDEVYEHLYFT-----DS-FTRIATLSPEIGQLTLTVGSAGKS-FAATGWRIGWVLSLNAELLSYAAKAHTR----- 303 (447)
T ss_dssp EEEEECTTTTCBCS-----SC-CCCGGGSCHHHHTTEEEEEEHHHH-TTCTTSCCEEEECSCHHHHHHHHHHHHH-----
T ss_pred EEEEeccchhcccC-----CC-CcCHHHcCCCCCCcEEEEecCchh-cCCcchhhEEEEeCCHHHHHHHHHHHhh-----
Confidence 99999999875431 10 1111 11 124679999999999 45445 899887345443321110000
Q ss_pred cCCCCccCCCCCchHHHHHHHHHHHc-HHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 380 YVSPTVAGSRPGGLIAGAWAALMSLG-QEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 380 ~~~~~~~gsr~~~~ia~~~aal~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
...+.+....+++.++|.... .+.+++..++..++++++.+.|+++ |++
T Consensus 304 -----~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 353 (447)
T 3b46_A 304 -----ICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLP 353 (447)
T ss_dssp -----HTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred -----ccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 000111112234444554322 3446778888899999999999875 443
No 112
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.84 E-value=1.6e-19 Score=177.75 Aligned_cols=222 Identities=14% Similarity=0.072 Sum_probs=164.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEe
Q 013675 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v 253 (438)
.++++.+++++|.++++ + ++|+|||+|+.++++++ ++|+++.++|.++...++..|++++.+
T Consensus 64 ~~l~~~la~~~~~~~~~----i--~~~~g~t~al~~~~~~~------------d~vi~~~~~~~~~~~~~~~~g~~~~~~ 125 (361)
T 3ftb_A 64 RRLNKSIENYLKLKDIG----I--VLGNGASEIIELSISLF------------EKILIIVPSYAEYEINAKKHGVSVVFS 125 (361)
T ss_dssp HHHHHHHHHHHTCCSCE----E--EEESSHHHHHHHHHTTC------------SEEEEEESCCTHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCCcce----E--EEcCCHHHHHHHHHHHc------------CcEEEecCChHHHHHHHHHcCCeEEEe
Confidence 45666788888987765 6 89999999999998875 479999999999999999999999999
Q ss_pred eCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCC
Q 013675 254 PVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~ 330 (438)
|+++++.+|++++++++++ ++++++++|+||+|.+.| +++|+++|++||+++++|++|+++... +. .+..
T Consensus 126 ~~~~~~~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-----~~-~~~~ 198 (361)
T 3ftb_A 126 YLDENMCIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-----PS-SSFV 198 (361)
T ss_dssp ECCTTSCCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-----TT-SSSG
T ss_pred ecCcccCCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-----cc-cchh
Confidence 9998888999999999998 999999999999999976 667888888999999999999876541 00 0011
Q ss_pred cc-CCCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHHH
Q 013675 331 DF-SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEG 408 (438)
Q Consensus 331 ~~-~~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g 408 (438)
.. ...+.+++..+++|.+. .+.++|++++.++++.+........| +-+....+++.++++ ..++
T Consensus 199 ~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~l~--~~~~ 264 (361)
T 3ftb_A 199 GEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPW------------NINCFAEMAAINCLK--DTNY 264 (361)
T ss_dssp GGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTT------------CSCHHHHHHHHHTSS--CHHH
T ss_pred HhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCC------------CCCHHHHHHHHHHhc--CHHH
Confidence 11 12234577789999953 33457887756666544322111111 111111223333333 2467
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 409 YLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 409 ~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
+++..++..++++++.+.|+++|+++
T Consensus 265 ~~~~~~~~~~~~~~l~~~l~~~~~~~ 290 (361)
T 3ftb_A 265 IEESLLWIKKERKRFIEELNKIGFIK 290 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 78888999999999999999998876
No 113
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.84 E-value=1.3e-19 Score=182.28 Aligned_cols=236 Identities=13% Similarity=0.097 Sum_probs=168.6
Q ss_pred chhHHHHHHHHHHHHHHHhCCC--C-CCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNK--E-KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~--~-~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a 242 (438)
.++..++++.+.+++.+.+|.+ + ++ + ++|+|||+|+.++++++. .+| ++|+++.++|+++...
T Consensus 74 ~~g~~~l~~~ia~~~~~~~g~~~~~~~~----v--~~t~g~~~a~~~~~~~~~-----~~g---d~Vl~~~p~~~~~~~~ 139 (412)
T 2x5d_A 74 SRGIPRLRRAISHWYRDRYDVQIDPESE----A--IVTIGSKEGLAHLMLATL-----DHG---DTILVPNPSYPIHIYG 139 (412)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCCCCTTTS----E--EEESCHHHHHHHHHHHHC-----CTT---CEEEEEESCCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCCcC----E--EEcCChHHHHHHHHHHhC-----CCC---CEEEEcCCCchhHHHH
Confidence 4556778888888887777863 3 33 6 999999999999999875 366 8999999999999999
Q ss_pred HhhcCcEEEEeeCCCC--CccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccchhh
Q 013675 243 AQYFNIKLWRVPVDKE--FRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVL 317 (438)
Q Consensus 243 ~~~~Gi~v~~v~~~~~--~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg~~~ 317 (438)
++..|++++.+|++++ +.+|++++++++++++++|++++|+||||.+.| +++|+++|++||+++++|++|+++..
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~ 219 (412)
T 2x5d_A 140 AVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVY 219 (412)
T ss_dssp HHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC
T ss_pred HHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEecccccccc
Confidence 9999999999999863 458999999999989999999999999999976 68899999999999999999987653
Q ss_pred hhhhhcCCCCCCC-ccC-CCCccEEEeCCCCCCCCCC--CcEEEEEecccccccchhcccccCCCccCCCCccCCCCCch
Q 013675 318 PFAKKLGYPIPPF-DFS-VQGVTSISVDVHKYGLAPK--GTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGL 393 (438)
Q Consensus 318 pf~~~~g~~~p~~-~~~-~~gvdsis~s~hK~~~~p~--g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ 393 (438)
. |...+++ .+. ..+.++++.++||++ +++ .+|+++.+ +++..........+. ++-+...
T Consensus 220 ~-----g~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~~~~~~~~----------~~~~~~~ 282 (412)
T 2x5d_A 220 D-----GWKAPSIMQVPGAKDIAVEFFTLSKSY-NMAGWRIGFMVGN-PELVSALARIKSYHD----------YGTFTPL 282 (412)
T ss_dssp T-----TCCCCCGGGSTTGGGTEEEEEECC-CC-SCTTSCCEEEEEC-HHHHHHHHHHHHHHC----------CCCCHHH
T ss_pred C-----CCCCCChhhccCccCcEEEEecCcccc-CCcccceEEEEcC-HHHHHHHHHHHhhhc----------cCCCHHH
Confidence 1 1101111 111 135789999999995 433 47998875 443322111110000 0111111
Q ss_pred HHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 394 IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 394 ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
.+++.+++. .+.+.+++..++..++++++.+.|+++ +++
T Consensus 283 ~~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 321 (412)
T 2x5d_A 283 QVAAIAALE-GDQQCVRDIARQYQQRRDVLVKGLREA-GWM 321 (412)
T ss_dssp HHHHHHHHH-SCSHHHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred HHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence 222233332 234667888889999999999999875 444
No 114
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.84 E-value=1e-19 Score=180.67 Aligned_cols=234 Identities=17% Similarity=0.105 Sum_probs=168.2
Q ss_pred chhHHHHHHHHHHHHHHHhCCCC--C-CCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKE--K-ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~--~-~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a 242 (438)
.++..++++.+.+++.+.+|.+. + + + ++|+|+++++.++++++. ++| ++|+++.++|.++...
T Consensus 62 ~~~~~~l~~~ia~~~~~~~g~~~~~~~~----v--~~~~g~~~a~~~~~~~l~-----~~g---d~vl~~~p~y~~~~~~ 127 (376)
T 2dou_A 62 KSCTLPFLEEAARWYEGRYGVGLDPRRE----A--LALIGSQEGLAHLLLALT-----EPE---DLLLLPEVAYPSYFGA 127 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCCCTTTS----E--EEESSHHHHHHHHHHHHC-----CTT---CEEEEESSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCcc----E--EEcCCcHHHHHHHHHHhc-----CCC---CEEEECCCCcHhHHHH
Confidence 35677788888888887779862 3 3 6 899999999999999875 256 8999999999999999
Q ss_pred HhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccchhhhh
Q 013675 243 AQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPF 319 (438)
Q Consensus 243 ~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg~~~pf 319 (438)
++..|++++.+|++.++.+|++++++++++++++|++++|+||||.+.| +++|+++|++||+++++|++|+++...
T Consensus 128 ~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~- 206 (376)
T 2dou_A 128 ARVASLRTFLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYE- 206 (376)
T ss_dssp HHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSS-
T ss_pred HHHcCCEEEEeeCCCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccC-
Confidence 9999999999999546679999999999888999999999999999977 678999999999999999999876531
Q ss_pred hhhcCCCCCCCcc-CCCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHH
Q 013675 320 AKKLGYPIPPFDF-SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGA 397 (438)
Q Consensus 320 ~~~~g~~~p~~~~-~~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~ 397 (438)
|...+.++. ...+.+++..+++|++. .+..+|+++.+ +++.+........|.. +-+....+++
T Consensus 207 ----~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~----------~~~~~~~~a~ 271 (376)
T 2dou_A 207 ----GEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS-EEALARLERVKGVIDF----------NQYAGVLRMG 271 (376)
T ss_dssp ----SCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC-HHHHHHHHHHHHHHCC----------CSCHHHHHHH
T ss_pred ----CCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC-HHHHHHHHHHHHhccc----------CCCHHHHHHH
Confidence 110111222 12345788889999942 23347987664 4443321111111110 0011112233
Q ss_pred HHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 398 WAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 398 ~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
.++++. +.+.+++..++..++++++.+.|+++
T Consensus 272 ~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~ 303 (376)
T 2dou_A 272 VEALKT-PKEVVRGYARVYRERALGMAEALKGV 303 (376)
T ss_dssp HHHHTS-CHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333432 35677888888999999999999875
No 115
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.84 E-value=6.7e-20 Score=184.42 Aligned_cols=218 Identities=17% Similarity=0.084 Sum_probs=159.0
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceeE---cCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecC-CCcCcHHH--------
Q 013675 174 AEVIAMTAALLGNKEKASGGQVCGNM---TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPV-SAHSAYDK-------- 241 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~~~~~~~v~g~~---t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~-~~h~s~~~-------- 241 (438)
+++.+.+++++|.+.. ++ +++||+|+.+++.++. ++| |+|+++. +.|..+..
T Consensus 62 ~~Le~~lA~l~g~e~a--------lv~p~~~sGt~Ai~~al~all-----~~G---D~Vl~~~~~~y~~~~~~~~~~g~~ 125 (409)
T 3jzl_A 62 DTLERVYATVFKTEAA--------LVRPQIISGTHAISTVLFGIL-----RPD---DELLYITGQPYDTLEEIVGIRKQG 125 (409)
T ss_dssp HHHHHHHHHHHTCSEE--------EEETTSCSHHHHHHHHHHHHC-----CTT---CEEEECSSSCCTTHHHHHTSSSSS
T ss_pred HHHHHHHHHHhCCCcE--------EEECCCccHHHHHHHHHHHhc-----CCC---CEEEEeCCCCcHhHHHHHhcccch
Confidence 3444578999998643 44 8999999999998875 377 8999998 88888774
Q ss_pred --HHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEec----CCCCCccccCHHHHHHHHHH--cCCeEEEecccc
Q 013675 242 --AAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSA----PGFPHGIIDPIQELGELALS--HGTCLHVDLCLG 313 (438)
Q Consensus 242 --a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~----~~~~tG~iddi~~I~~la~~--~~i~lhVD~a~g 313 (438)
.++.+|++++.+|+++++.+|+++++++++++|++|++++ |+||+|.+.|+++|+++|++ +|+++|+|++|+
T Consensus 126 ~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~ 205 (409)
T 3jzl_A 126 QGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYG 205 (409)
T ss_dssp SSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTC
T ss_pred hhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcc
Confidence 4466799999999988999999999999999999999999 99999999999999999999 999999999987
Q ss_pred chhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCC--CCcEEEEEecccccccchh-cccccCCCccCCCCccCCCC
Q 013675 314 GFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAP--KGTSVVLYRNREIRKHQFV-AVTEWSGGLYVSPTVAGSRP 390 (438)
Q Consensus 314 g~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p--~g~g~l~~r~~~~~~~~~~-~~~~~~g~~~~~~~~~gsr~ 390 (438)
.++.. .+....|+|+++.++||++.++ ...|+++.+ +++.+.... ....+.+.. .|...
T Consensus 206 ~~~~~-----------~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~------~g~~~ 267 (409)
T 3jzl_A 206 EFVEY-----------QEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGK-EALVDLCGYRLTTPGIGRE------AGASL 267 (409)
T ss_dssp TTTSS-----------CCSGGGTCSEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTGGG------CCCCT
T ss_pred ccccc-----------CCccccCCeEEEECccccCCccCCceEEEEEeC-HHHHHHHHHHhcccccccc------ccccH
Confidence 55421 1123357899999999995443 224776665 444332211 111111100 11111
Q ss_pred CchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013675 391 GGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFP 431 (438)
Q Consensus 391 ~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~ 431 (438)
. ..+++++ |......+.++..++++++++.|++++
T Consensus 268 ~----~~~~~l~--gl~~~~~r~~~~~~~a~~la~~L~~~g 302 (409)
T 3jzl_A 268 Y----SLLEMYQ--GFFLAPHVTAQAIKGARFTAAMLAEFG 302 (409)
T ss_dssp T----CHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred H----HHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1 1233432 334456778888999999999999873
No 116
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.84 E-value=3.1e-19 Score=180.67 Aligned_cols=226 Identities=18% Similarity=0.143 Sum_probs=163.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcE
Q 013675 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIK 249 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~ 249 (438)
.+...++++.+++++|.+ . . +++++|++|+..+++++. ++| ++|+++.+.|.++..+++..|.+
T Consensus 108 ~~~~~~l~~~la~~~g~~-~-----~--i~~~sGs~a~~~al~~l~-----~~g---d~vl~~~~~h~~~~~~~~~~g~~ 171 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTT-G-----A--IVFSTGYMANLGIISTLA-----GKG---EYVILDADSHASIYDGCQQGNAE 171 (427)
T ss_dssp CHHHHHHHHHHHHHHTCS-E-----E--EEESCHHHHHHHHHHHHS-----CTT---CEEEEETTCCHHHHHHHHHSCSE
T ss_pred cHHHHHHHHHHHHHhCCC-c-----e--EEecCcHHHHHHHHHHhc-----CCC---CEEEECCcccHHHHHHHHHcCCe
Confidence 355667778899999875 2 2 678888999999888864 366 89999999999999999999999
Q ss_pred EEEeeCCCCCccCHHHHHHhhcc----CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCC
Q 013675 250 LWRVPVDKEFRADVKAIKKYINR----NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGY 325 (438)
Q Consensus 250 v~~v~~~~~~~~d~~~Le~~I~~----~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~ 325 (438)
++.+|. .|+++|++++++ ++++|++++++||+|.+.|+++|.++|++||+++++|++|+++..+ ..|.
T Consensus 172 ~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~---~~g~ 243 (427)
T 2w8t_A 172 IVRFRH-----NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFG---PNGR 243 (427)
T ss_dssp EEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSS---TTSC
T ss_pred eEEeCC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccC---CCCC
Confidence 998874 589999999986 7899999999999999999999999999999999999999876652 1111
Q ss_pred CCCC-CccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHH
Q 013675 326 PIPP-FDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL 404 (438)
Q Consensus 326 ~~p~-~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~ 404 (438)
.... ++. ..++|++..++||++ ++.| |+++.++ ++.+........|. ..++.+...++++.++++.+
T Consensus 244 ~~~~~~~~-~~~~di~~~s~sK~~-g~~g-G~v~~~~-~l~~~l~~~~~~~~--------~~~~~~~~~~aa~~~al~~~ 311 (427)
T 2w8t_A 244 GVYEAQGL-EGQIDFVVGTFSKSV-GTVG-GFVVSNH-PKFEAVRLACRPYI--------FTASLPPSVVATATTSIRKL 311 (427)
T ss_dssp CHHHHTTC-TTCCSEEEEESSSTT-CSCC-EEEEECC-TTGGGGGGTCHHHH--------SSCCCCHHHHHHHHHHHHHH
T ss_pred chHhhcCC-CcCCcEEEecchhhh-ccCC-CEEEeCH-HHHHHHHHhccccc--------ccCCCCHHHHHHHHHHHHHH
Confidence 0000 222 246899999999995 5777 8877754 44332211100110 01112222344445566554
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 405 GQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 405 g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
. .+++..++..++++++.+.|+++ +++
T Consensus 312 ~--~~~~~~~~~~~~~~~l~~~L~~~-g~~ 338 (427)
T 2w8t_A 312 M--TAHEKRERLWSNARALHGGLKAM-GFR 338 (427)
T ss_dssp T--SCHHHHHHHHHHHHHHHHHHHHH-TCE
T ss_pred h--cCHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 2 24677888899999999999876 544
No 117
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.84 E-value=2.2e-19 Score=178.97 Aligned_cols=233 Identities=17% Similarity=0.148 Sum_probs=161.4
Q ss_pred hhHHHHHHHHHHHH-HHHhCCCCCCCCCccceeEcCChHHHHHHHHHHH-HHHHHHhcCCCCCeEEecCCCcCcHHHHHh
Q 013675 167 QSVARFEAEVIAMT-AALLGNKEKASGGQVCGNMTSGGTESILLAVKSS-RDYMRNKRGITRPEMIIPVSAHSAYDKAAQ 244 (438)
Q Consensus 167 ~~~~~~e~~~~~~~-a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~-~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~ 244 (438)
|...++|+ .+ ++++|.. .. + ++|+|||+|+.+++.++ . ++| |+|+++.++|+++..++.
T Consensus 36 ~~~~~l~~----~~~a~~~g~~-~~----~--v~~~sgt~al~~al~~l~~-----~~G---d~Vi~~~~~~~~~~~~~~ 96 (377)
T 3ju7_A 36 PINQRFEQ----TIMSGFFQNR-GA----V--TTVANATLGLMAAIQLKKR-----KKG---KYALMPSFTFPATPLAAI 96 (377)
T ss_dssp HHHHHHHH----HHHHHTSTTC-SE----E--EEESCHHHHHHHHHHHHSC-----TTC---CEEEEESSSCTHHHHHHH
T ss_pred HHHHHHHH----HHHHHHhCCC-Ce----E--EEeCCHHHHHHHHHHHcCC-----CCc---CEEEECCCCcHHHHHHHH
Confidence 44554544 57 8888832 22 3 89999999999999886 3 377 999999999999999999
Q ss_pred hcCcEEEEeeCCC-CCccCHHHHHHhh-ccC--cEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhh
Q 013675 245 YFNIKLWRVPVDK-EFRADVKAIKKYI-NRN--TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFA 320 (438)
Q Consensus 245 ~~Gi~v~~v~~~~-~~~~d~~~Le~~I-~~~--t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~ 320 (438)
..|++++.+|+++ ++.+|++++++++ +++ |++|+ +++++|.+.|+++|.++|+ +|+++|+|++++.+...
T Consensus 97 ~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~-- 170 (377)
T 3ju7_A 97 WCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMN-- 170 (377)
T ss_dssp HTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEE--
T ss_pred HcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeE--
Confidence 9999999999984 8899999999998 667 88887 5667999999999999999 99999999998633221
Q ss_pred hhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhccc-ccCCCccCCCCccCCCCCchHHHHHH
Q 013675 321 KKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVT-EWSGGLYVSPTVAGSRPGGLIAGAWA 399 (438)
Q Consensus 321 ~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~-~~~g~~~~~~~~~gsr~~~~ia~~~a 399 (438)
.+. +.......++++++++||++.+ ...|+++++++++.+....... .+... + .....|.+.+..-..++.
T Consensus 171 --~~~---~~g~~~~d~~~~S~~~~K~l~~-g~gG~~~~~~~~l~~~~~~~~~~g~~~~-~-~~~~~g~~~~~~~~~aa~ 242 (377)
T 3ju7_A 171 --GGM---HYGQDFSGMIIYSFHATKPFGI-GEGGLIYSKNEEDIQRIKRMGNFGFDTN-R-ECTMMGFNCKMSEYAAAI 242 (377)
T ss_dssp --TTE---ETTTTCSSEEEEECBTTSSSCC-BSCEEEEESCHHHHHHHHHHTBTTBCTT-S-CBCSSCCBCCCCHHHHHH
T ss_pred --CCE---eccCCCCcEEEEECCCCCcCCC-CCcEEEEECCHHHHHHHHHHHhcCCCCC-C-ceeeccccCCCCHHHHHH
Confidence 000 0100112357777888999655 4567777777665433211111 11100 1 112223333222112333
Q ss_pred HHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 400 ALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 400 al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
++ .+.+.+.+..++..++++++.+.|+++++++
T Consensus 243 ~~--~~l~~l~~~~~~~~~~~~~~~~~L~~~~~~~ 275 (377)
T 3ju7_A 243 GI--ATMKKWDDKLKERTRISEWYKQLLQSNGLMK 275 (377)
T ss_dssp HH--HHHHTHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred HH--HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 33 3346778889999999999999999887653
No 118
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.84 E-value=4.5e-20 Score=184.17 Aligned_cols=227 Identities=13% Similarity=0.062 Sum_probs=162.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcE
Q 013675 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIK 249 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~ 249 (438)
.+...++++++++++|.+. . +++++||+|+..+++++. ++| ++|+++.+.|+++..+++..|.+
T Consensus 87 ~~~~~~l~~~la~~~~~~~-~-------i~~~sGt~a~~~~l~~~~-----~~g---d~v~~~~~~~~~~~~~~~~~g~~ 150 (399)
T 3tqx_A 87 QTIHKELEKDISEFLGTDD-T-------ILYSSCFDANGGLFETLL-----GPE---DAIISDELNHASIIDGIRLCKAQ 150 (399)
T ss_dssp BHHHHHHHHHHHHHHTCSE-E-------EEESCHHHHHHTTHHHHC-----CTT---CEEEEETTCCHHHHHHHHSCCSE
T ss_pred chHHHHHHHHHHHHHCCCc-E-------EEECchHHHHHHHHHHhc-----CCC---CEEEECCcccHHHHHHHHHcCCc
Confidence 3456677788999999863 2 566677999999888765 366 89999999999999999999999
Q ss_pred EEEeeCCCCCccCHHHHHHhhcc------CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhc
Q 013675 250 LWRVPVDKEFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (438)
Q Consensus 250 v~~v~~~~~~~~d~~~Le~~I~~------~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~ 323 (438)
++.+|. +|++++++++++ ++++|++++++||+|.+.|+++|.++|++||+++|+|++|+.+..+ ..
T Consensus 151 ~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~---~~ 222 (399)
T 3tqx_A 151 RYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIG---EN 222 (399)
T ss_dssp EEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSS---TT
T ss_pred eeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccC---CC
Confidence 999986 478899999876 8999999999999999999999999999999999999999632221 11
Q ss_pred CCCCCCCccC--CCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHH
Q 013675 324 GYPIPPFDFS--VQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAAL 401 (438)
Q Consensus 324 g~~~p~~~~~--~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal 401 (438)
+. +..... ..+.|+++.++||++.++.| |+++.++ ++.+........|. ..++-+...++++.+++
T Consensus 223 ~~--~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l 290 (399)
T 3tqx_A 223 GR--GTPEYCGVADRVDILTGTLGKALGGASG-GYTSGHK-EIIEWLRNRSRPYL--------FSNTVAPVIVATSLKVL 290 (399)
T ss_dssp SC--CHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEECH-HHHHHHHHHCHHHH--------SSCCCCHHHHHHHHHHH
T ss_pred CC--chHHhhCCCCCCcEEEecchHhcccCce-EEEEcCH-HHHHHHHHhCccee--------ccCCCcHHHHHHHHHHH
Confidence 10 001111 23569999999999655777 8876654 33322111111110 01111112234555555
Q ss_pred HHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 402 MSLGQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 402 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
+.+. ++.++..++..++++++.+.|+++ |++
T Consensus 291 ~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 321 (399)
T 3tqx_A 291 ELLK-TEGPQLRKQLQENSRYFRAGMEKL-GFQ 321 (399)
T ss_dssp HHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred HHHh-hccHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 5443 567888899999999999999876 444
No 119
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.83 E-value=1.1e-19 Score=182.13 Aligned_cols=239 Identities=17% Similarity=0.077 Sum_probs=167.2
Q ss_pred cchhHHHHHHHHHHHHHHHhCC--CCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH
Q 013675 165 IFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (438)
Q Consensus 165 ~~~~~~~~e~~~~~~~a~l~g~--~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a 242 (438)
..++..++++++.+++.+.+|. ++++ + ++|+|||+|+.++++++.. +| ++|+++.++|.++..+
T Consensus 73 ~~~~~~~l~~~la~~~~~~~g~~~~~~~----v--~~t~g~t~a~~~~~~~~~~-----~g---d~vl~~~p~~~~~~~~ 138 (407)
T 2zc0_A 73 PANGIPELREELAAFLKKYDHLEVSPEN----I--VITIGGTGALDLLGRVLID-----PG---DVVITENPSYINTLLA 138 (407)
T ss_dssp CTTCCHHHHHHHHHHHHHHSCCCCCGGG----E--EEESHHHHHHHHHHHHHCC-----TT---CEEEEEESCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCcce----E--EEecCHHHHHHHHHHHhcC-----CC---CEEEEeCCChHHHHHH
Confidence 3445678888888888777784 3443 5 8999999999999999852 66 8999999999999999
Q ss_pred HhhcCcEEEEeeCCCCCccCHHHHHHhhc----c--CcEEE-EEecCCCCCccccCHH---HHHHHHHHcCCeEEEeccc
Q 013675 243 AQYFNIKLWRVPVDKEFRADVKAIKKYIN----R--NTVLI-VGSAPGFPHGIIDPIQ---ELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 243 ~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~----~--~t~~v-v~~~~~~~tG~iddi~---~I~~la~~~~i~lhVD~a~ 312 (438)
++..|++++.+|+++++ +|+++|+++++ + ++++| ++++++||+|.+.|.+ +|+++|++||+++|+|++|
T Consensus 139 ~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 217 (407)
T 2zc0_A 139 FEQLGAKIEGVPVDNDG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAY 217 (407)
T ss_dssp HHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred HHHcCCEEEEcccCCCC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999999997765 99999999998 6 78887 5789999999999876 9999999999999999999
Q ss_pred cchhhhhhhhcCCCCCCC-ccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCC
Q 013675 313 GGFVLPFAKKLGYPIPPF-DFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG 391 (438)
Q Consensus 313 gg~~~pf~~~~g~~~p~~-~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~ 391 (438)
+++... |...+++ .+...+.+++..+++|++..+..+|+++.+ +++..........+. ....
T Consensus 218 ~~~~~~-----~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~-----------~~~~ 280 (407)
T 2zc0_A 218 NFMRYE-----GGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAE-GEILKKVLMQKQPID-----------FCAP 280 (407)
T ss_dssp TTSBSS-----CSSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEECC-HHHHHHHHHHHTTTT-----------SSSC
T ss_pred cccccC-----CCCCCChhhcCCCCCEEEEcccccccCCCcceEEEecC-HHHHHHHHHHHHhhc-----------CCCC
Confidence 876531 1101111 122224457778889995522348988775 444332111111110 0111
Q ss_pred ch-HHHHHHHHHHHc-H-HHHHHHHHHHHHHHHHHHHHhhc-CCCccc
Q 013675 392 GL-IAGAWAALMSLG-Q-EGYLENTKAIMEVSESIQKGLVL-FPMFLP 435 (438)
Q Consensus 392 ~~-ia~~~aal~~~g-~-~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~ 435 (438)
.. .+++.++++... . +.+++..++..++++++.+.|++ .|++++
T Consensus 281 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 328 (407)
T 2zc0_A 281 AISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEF 328 (407)
T ss_dssp HHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCB
T ss_pred HHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 11 222333332211 2 44667778888899999999987 576654
No 120
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.83 E-value=1.4e-19 Score=182.54 Aligned_cols=211 Identities=12% Similarity=0.069 Sum_probs=154.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHH----hhcCc
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA----QYFNI 248 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~----~~~Gi 248 (438)
.+++++.+++++|.+. . ++++||++|+.++++++. ++| |+|+++.+.|.+....+ +.+|+
T Consensus 84 ~~~le~~lA~l~g~~~------~--i~~ssGt~Ai~~al~~l~-----~~G---d~Vi~~~~~y~~~~~~~~~~l~~~G~ 147 (415)
T 2fq6_A 84 HFSLQQAMCELEGGAG------C--VLFPCGAAAVANSILAFI-----EQG---DHVLMTNTAYEPSQDFCSKILSKLGV 147 (415)
T ss_dssp HHHHHHHHHHHHTCSE------E--EEESSHHHHHHHHHHTTC-----CTT---CEEEEETTSCHHHHHHHHHTGGGGTC
T ss_pred HHHHHHHHHHHhCCCe------E--EEeCCHHHHHHHHHHHHh-----CCC---CEEEEeCCCchHHHHHHHHHHHHcCc
Confidence 3445557889999752 2 677899999999998764 367 89999999998876554 45699
Q ss_pred EEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHH--cCCeEEEeccccchhhhhhhhcCCC
Q 013675 249 KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALS--HGTCLHVDLCLGGFVLPFAKKLGYP 326 (438)
Q Consensus 249 ~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~--~~i~lhVD~a~gg~~~pf~~~~g~~ 326 (438)
+++.++.+ |+++++++|+++|++|++++|+||+|.+.|+++|+++|++ +|+++|+|++++.+..
T Consensus 148 ~v~~v~~~-----d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~--------- 213 (415)
T 2fq6_A 148 TTSWFDPL-----IGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVL--------- 213 (415)
T ss_dssp EEEEECTT-----CGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTS---------
T ss_pred EEEEECCC-----CHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCccccc---------
Confidence 99999865 8999999999999999999999999999999999999999 9999999999874321
Q ss_pred CCCCccCCCCccEEEeCCCCCCCCCCC---cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHH
Q 013675 327 IPPFDFSVQGVTSISVDVHKYGLAPKG---TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMS 403 (438)
Q Consensus 327 ~p~~~~~~~gvdsis~s~hK~~~~p~g---~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~ 403 (438)
..++ ..|+|+++.|+||++ +|.| .|+++.+++ +........ .. .|..... ..+|..++
T Consensus 214 ~~p~---~~g~Div~~S~sK~l-g~~g~~~~G~l~~~~~-~~~~l~~~~-~~----------~G~~~~~--~~a~~~~~- 274 (415)
T 2fq6_A 214 FKAL---DFGIDVSIQAATKYL-VGHSDAMIGTAVCNAR-CWEQLRENA-YL----------MGQMVDA--DTAYITSR- 274 (415)
T ss_dssp SCGG---GGTCSEEEEETTTTT-TCSSSCCCEEEEECTT-THHHHHHHH-HH----------TTCCCCH--HHHHHHHH-
T ss_pred CCcc---ccCCeEEEEeCcccc-CCCCCceEEEEEeCHH-HHHHHHHHH-Hh----------cCCCCCH--HHHHHHHh-
Confidence 1123 247899999999995 5544 687776643 332211110 00 1111111 24455443
Q ss_pred HcHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 013675 404 LGQEGYLENTKAIMEVSESIQKGLVLFPMF 433 (438)
Q Consensus 404 ~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~ 433 (438)
+.+.+..+.++..++++.+++.|++.|.+
T Consensus 275 -~l~~l~~r~~~~~~n~~~l~~~L~~~~~v 303 (415)
T 2fq6_A 275 -GLRTLGVRLRQHHESSLKVAEWLAEHPQV 303 (415)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred -hhhHHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 34566777788888899999999887654
No 121
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.83 E-value=2.5e-19 Score=174.69 Aligned_cols=158 Identities=19% Similarity=0.147 Sum_probs=129.9
Q ss_pred HHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHH----hhcCcEE
Q 013675 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA----QYFNIKL 250 (438)
Q Consensus 175 ~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~----~~~Gi~v 250 (438)
++++.+++++|.+ .. +++++||+|+.++++++. ++| ++|+++.+.|.++...+ +..|+++
T Consensus 2 ~l~~~la~~~g~~-~~-------i~~~sG~~a~~~~~~~~~-----~~g---~~v~~~~~~~~~~~~~~~~~~~~~g~~~ 65 (331)
T 1pff_A 2 ALEGKIAKLEHAE-AC-------AATASGMGAIAASVWTFL-----KAG---DHLISDDCLYGCTHALFEHQLRKFGVEV 65 (331)
T ss_dssp HHHHHHHHHHTCS-EE-------EEESSHHHHHHHHHHHHC-----CTT---CEEEEESCCCHHHHHHHHTHHHHTTCEE
T ss_pred hHHHHHHHHhCCC-eE-------EEeCChHHHHHHHHHHhc-----CCC---CEEEEcCCCcchHHHHHHHHHHhcCCEE
Confidence 4567899999987 32 566667999999999874 366 89999999999987765 4579999
Q ss_pred EEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHH-cCCeEEEeccccchhhhhhhhcCCCCCC
Q 013675 251 WRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALS-HGTCLHVDLCLGGFVLPFAKKLGYPIPP 329 (438)
Q Consensus 251 ~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~-~~i~lhVD~a~gg~~~pf~~~~g~~~p~ 329 (438)
+.+|. .|+++++++++++|++|++++|+||+|.+.|+++|.++|++ +|+++++|++|+.+..+ . +
T Consensus 66 ~~~~~-----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~--------~-~ 131 (331)
T 1pff_A 66 DFIDM-----AVPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILT--------N-P 131 (331)
T ss_dssp EEECT-----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHC--------C-G
T ss_pred EEeCC-----CCHHHHHHhhcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccC--------C-h
Confidence 99986 48999999999999999999999999999999999999999 99999999999865541 1 2
Q ss_pred CccCCCCccEEEeCCCCCCCCCCC--cEEEEEeccccc
Q 013675 330 FDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIR 365 (438)
Q Consensus 330 ~~~~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~ 365 (438)
+ ..++|+++.++||++.+|.+ +|+++.+++++.
T Consensus 132 ~---~~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~ 166 (331)
T 1pff_A 132 L---DLGVDIVVHSATKYINGHTDVVAGLVCSRADIIA 166 (331)
T ss_dssp G---GGTCSEEEEETTTTTSSSSSCCCEEEEECHHHHH
T ss_pred h---hcCCcEEEEECccccCCCCCceEEEEEeCcHHHH
Confidence 2 24689999999999777776 788877753443
No 122
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.83 E-value=1.1e-19 Score=182.58 Aligned_cols=236 Identities=13% Similarity=0.062 Sum_probs=170.2
Q ss_pred hhHHHHHHHHHHHHHHHhCCC--C-CCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHH
Q 013675 167 QSVARFEAEVIAMTAALLGNK--E-KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA 243 (438)
Q Consensus 167 ~~~~~~e~~~~~~~a~l~g~~--~-~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~ 243 (438)
++..++++.+.+++.+.+|.+ + ++ + ++|+|+|+|+.++++++. .+| ++|+++.+.|.++...+
T Consensus 85 ~g~~~lr~~ia~~~~~~~g~~~~~~~~----v--~~t~G~~~al~~~~~~l~-----~~g---d~Vl~~~p~y~~~~~~~ 150 (404)
T 2o1b_A 85 HGKEAFKQAIVDFYQRQYNVTLDKEDE----V--CILYGTKNGLVAVPTCVI-----NPG---DYVLLPDPGYTDYLAGV 150 (404)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCTTTS----E--EEESSHHHHHHHHHHHHC-----CTT---CEEEEEESCCSSHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCccc----E--EEcCCcHHHHHHHHHHhc-----CCC---CEEEEcCCCchhHHHHH
Confidence 456778888888888888975 2 33 5 899999999999999875 256 89999999999999999
Q ss_pred hhcCcEEEEeeCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccchhhhh
Q 013675 244 QYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPF 319 (438)
Q Consensus 244 ~~~Gi~v~~v~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg~~~pf 319 (438)
+..|.+++.+|+++ ++.+|+++|++++++++++|++++|+||||.+.| +++|+++|+++|+++++|++|+++...
T Consensus 151 ~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~- 229 (404)
T 2o1b_A 151 LLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFD- 229 (404)
T ss_dssp HHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSS-
T ss_pred HHCCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccC-
Confidence 99999999999986 5568999999999888999999999999999976 788999999999999999999875431
Q ss_pred hhhcCCCCCCCccC-CCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHH
Q 013675 320 AKKLGYPIPPFDFS-VQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGA 397 (438)
Q Consensus 320 ~~~~g~~~p~~~~~-~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~ 397 (438)
|...+..... ..+.++++.++||++. .+..+|+++.+ +++.+........+.. +-+....+++
T Consensus 230 ----g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~----------~~~~~~~~a~ 294 (404)
T 2o1b_A 230 ----AKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGN-KDMIQALKKYQTHTNA----------GMFGALQDAA 294 (404)
T ss_dssp ----SCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEEC-HHHHHHHHHHHHHHCC----------CCCHHHHHHH
T ss_pred ----CCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecC-HHHHHHHHHHHhhccC----------CCCHHHHHHH
Confidence 1101111211 1245788999999953 22347987764 4443321111111110 1111112233
Q ss_pred HHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 398 WAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 398 ~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
.+++.. +.+.+++..++..++++++.+.|+++ +++
T Consensus 295 ~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 329 (404)
T 2o1b_A 295 IYALNH-YDDFLEEQSNVFKTRRDRFEAMLAKA-DLP 329 (404)
T ss_dssp HHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhc-CCe
Confidence 333432 35677888888999999999999876 554
No 123
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.83 E-value=6.2e-19 Score=178.17 Aligned_cols=226 Identities=17% Similarity=0.134 Sum_probs=159.4
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEe
Q 013675 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v 253 (438)
.++++.+++++|.+ + + ++|+|||+|+.++++++. +| ++|+++.++|+++..++...|++++.+
T Consensus 55 ~~l~~~la~~~~~~--~----v--~~~~ggt~al~~~l~~l~------~g---d~Vlv~~~~~~~~~~~~~~~G~~~~~v 117 (424)
T 2po3_A 55 REFEERVAGLAGVR--H----A--VATCNATAGLQLLAHAAG------LT---GEVIMPSMTFAATPHALRWIGLTPVFA 117 (424)
T ss_dssp HHHHHHHHHHHTSS--E----E--EEESCHHHHHHHHHHHHT------CC---SEEEEESSSCTHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCC--e----E--EEeCCHHHHHHHHHHHcC------CC---CEEEECCCccHHHHHHHHHcCCEEEEE
Confidence 34555678888874 2 4 899999999999999874 56 899999999999999999999999999
Q ss_pred eCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEecccc-chhhhhhhhcCCCCCCCc
Q 013675 254 PVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLG-GFVLPFAKKLGYPIPPFD 331 (438)
Q Consensus 254 ~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~g-g~~~pf~~~~g~~~p~~~ 331 (438)
|+++ ++.+|+++|+++++++|++|++++ |+|.+.++++|.++|+++|+++++|++|+ |+... +. ++.
T Consensus 118 ~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~-----~~---~~~ 186 (424)
T 2po3_A 118 DIDPDTGNLDPDQVAAAVTPRTSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVD-----GR---PAG 186 (424)
T ss_dssp CBCTTTSSBCHHHHGGGCCTTEEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEET-----TE---ETT
T ss_pred ecCCCcCCcCHHHHHHhhCcCCcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEECccccCCeEC-----Ce---ecc
Confidence 9986 788999999999998999988865 69999999999999999999999999998 44321 10 111
Q ss_pred cCCCCccEEEeCCC--CCCCCCCCcEEEEEecccccccchhc-ccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHHH
Q 013675 332 FSVQGVTSISVDVH--KYGLAPKGTSVVLYRNREIRKHQFVA-VTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEG 408 (438)
Q Consensus 332 ~~~~gvdsis~s~h--K~~~~p~g~g~l~~r~~~~~~~~~~~-~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g 408 (438)
...|+++.++| |+ ++|..+|+++.+++++.+..... ...+.. .+ .....|........++++++. ..++
T Consensus 187 ---~~~di~~~S~sk~K~-l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~-~~-~~~~~g~~~~~~~~~aa~~l~--~~~~ 258 (424)
T 2po3_A 187 ---SLGDAEVFSFHATKA-VNAFEGGAVVTDDADLAARIRALHNFGFDL-PG-GSPAGGTNAKMSEAAAAMGLT--SLDA 258 (424)
T ss_dssp ---SSSSEEEEECCTTSS-SCCSSCEEEEESCHHHHHHHHHHHBTTTTC-TT-CCTTCCCBCCCCHHHHHHHHH--HHHH
T ss_pred ---cccCEEEEeCCCCCC-ccCCCCeEEEeCCHHHHHHHHHHHhcCccc-cc-cccccCcCCCcCHHHHHHHHH--HHHH
Confidence 01256666655 87 45566788777645543321111 111110 00 111112111111123334443 3467
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 409 YLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 409 ~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+++..++..++++++.+.|+++|++++
T Consensus 259 ~~~~~~~~~~~~~~l~~~L~~~~g~~~ 285 (424)
T 2po3_A 259 FPEVIDRNRRNHAAYREHLADLPGVLV 285 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 788889999999999999998887764
No 124
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.83 E-value=9.4e-20 Score=184.09 Aligned_cols=217 Identities=13% Similarity=0.079 Sum_probs=159.3
Q ss_pred HHHHHHHHHhCCCCCCCCCccceeE---cCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecC-CCcCcHH----------
Q 013675 175 EVIAMTAALLGNKEKASGGQVCGNM---TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPV-SAHSAYD---------- 240 (438)
Q Consensus 175 ~~~~~~a~l~g~~~~~~~~~v~g~~---t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~-~~h~s~~---------- 240 (438)
++.+.+++++|.+.. ++ ++|||+|+..++.++. ++| |+|+++. +.|....
T Consensus 77 ~Le~~lA~l~g~e~a--------lv~p~~~sGt~Ai~~al~all-----~pG---D~Vl~~~~~~y~~~~~~~g~~~~~~ 140 (427)
T 3i16_A 77 SLDAVYARVFNTESA--------LVRPHFVNGTHALGAALFGNL-----RPG---NTMLSVCGEPYDTLHDVIGITENSN 140 (427)
T ss_dssp HHHHHHHHHHTCSEE--------EEETTCCSHHHHHHHHHHHHC-----CTT---CEEEESSSSCCGGGHHHHTCSCCCS
T ss_pred HHHHHHHHHhCCcce--------EEeCCCccHHHHHHHHHHHHh-----CCC---CEEEEeCCCccHHHHHHHhccccch
Confidence 344579999998643 45 8999999999998875 377 9999998 8887766
Q ss_pred -HHHhhcCcEEEEeeCCCCCccCHHHHHHhhc--cCcEEEEEec----CCCCCccccCHHHHHHHHHH--cCCeEEEecc
Q 013675 241 -KAAQYFNIKLWRVPVDKEFRADVKAIKKYIN--RNTVLIVGSA----PGFPHGIIDPIQELGELALS--HGTCLHVDLC 311 (438)
Q Consensus 241 -~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~--~~t~~vv~~~----~~~~tG~iddi~~I~~la~~--~~i~lhVD~a 311 (438)
+.++.+|++++.+|+++++.+|+++++++++ ++|++|++++ |+||+|.+.|+++|+++|++ +|++++||++
T Consensus 141 ~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a 220 (427)
T 3i16_A 141 MGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNC 220 (427)
T ss_dssp SCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 4456679999999998899999999999999 7899999999 99999999999999999999 9999999999
Q ss_pred ccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCC--CCcEEEEEecccccccchh-cccccCCCccCCCCccCC
Q 013675 312 LGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAP--KGTSVVLYRNREIRKHQFV-AVTEWSGGLYVSPTVAGS 388 (438)
Q Consensus 312 ~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p--~g~g~l~~r~~~~~~~~~~-~~~~~~g~~~~~~~~~gs 388 (438)
|+.+... .+....|+|+++.++||++.++ ...|+++.+ +++.+.... ......|.
T Consensus 221 ~~~~~~~-----------~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~li~~l~~~~~~~~~g~---------- 278 (427)
T 3i16_A 221 YGEFMDT-----------KEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGT-KDCIEKTSYRLTVPGIGG---------- 278 (427)
T ss_dssp TTTTSSS-----------SCGGGGTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGG----------
T ss_pred Ccccccc-----------CCccccCCeEEEecCcccCCCCCCceEEEEEEC-HHHHHHHHHhcccCccCc----------
Confidence 9755421 1122347899999999995431 334877665 444332211 11100110
Q ss_pred CCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013675 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFP 431 (438)
Q Consensus 389 r~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~ 431 (438)
..+.....+|.+++ |......+.++..+++.++++.|++++
T Consensus 279 ~~~~~~~~a~~~l~--gl~~~~~r~~~~~~~a~~la~~L~~~g 319 (427)
T 3i16_A 279 ECGSTFGVVRSMYQ--GLFLAPHISMEALKGAILCSRIMELAG 319 (427)
T ss_dssp GCCCCTTCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 00110112455553 345567888899999999999999874
No 125
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.83 E-value=2.4e-19 Score=181.25 Aligned_cols=232 Identities=13% Similarity=0.126 Sum_probs=164.7
Q ss_pred hHHHHHHHHHHHHHHHhC----CCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHH
Q 013675 168 SVARFEAEVIAMTAALLG----NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA 243 (438)
Q Consensus 168 ~~~~~e~~~~~~~a~l~g----~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~ 243 (438)
+..++++.+.+++.+.+| .++++ + ++|+|+|+++.+++++++. +| ++|+++.++|.++...+
T Consensus 84 g~~~lr~~la~~~~~~~g~~~~~~~~~----i--~~~~G~~~ai~~~~~~~~~-----~g---d~Vl~~~p~y~~~~~~~ 149 (428)
T 1iay_A 84 GLPEFRKAIAKFMEKTRGGRVRFDPER----V--VMAGGATGANETIIFCLAD-----PG---DAFLVPSPYYPAFNRDL 149 (428)
T ss_dssp CCHHHHHHHHHHHHHHTTTCSCCCTTS----C--EEEEHHHHHHHHHHHHHCC-----TT---CEEEEESSCCTTHHHHT
T ss_pred CcHHHHHHHHHHHHHhcCCCCCCChhh----E--EEccChHHHHHHHHHHhCC-----CC---CeEEEccCCCcchHHHH
Confidence 466788888888877777 44544 6 8999999999999998763 67 89999999999988755
Q ss_pred -hhcCcEEEEeeCCC--CCccCHHHHHHhhcc------CcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEecc
Q 013675 244 -QYFNIKLWRVPVDK--EFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLC 311 (438)
Q Consensus 244 -~~~Gi~v~~v~~~~--~~~~d~~~Le~~I~~------~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a 311 (438)
...|++++.+|.++ ++.+|++++++++++ ++++|++++|+||||.+.| +++|+++|+++|+++++|++
T Consensus 150 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea 229 (428)
T 1iay_A 150 RWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEI 229 (428)
T ss_dssp TTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECT
T ss_pred HHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEecc
Confidence 46799999999874 567999999999974 6899999999999999999 99999999999999999999
Q ss_pred ccchhhhhhhhcCCCCCCC-ccC------CCCcc--EEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCcc
Q 013675 312 LGGFVLPFAKKLGYPIPPF-DFS------VQGVT--SISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLY 380 (438)
Q Consensus 312 ~gg~~~pf~~~~g~~~p~~-~~~------~~gvd--sis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~ 380 (438)
|+++... +...+++ ... ..+.| ++..++||++ +.+| +|+++..++++.+........|.
T Consensus 230 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~-g~~Glr~G~~~~~~~~~~~~~~~~~~~~~---- 299 (428)
T 1iay_A 230 YAATVFD-----TPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM-GLPGFRVGIIYSFNDDVVNCARKMSSFGL---- 299 (428)
T ss_dssp TGGGCCS-----SSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTS-SCGGGCEEEEEESCHHHHHHHHHHHTTSC----
T ss_pred ccccccC-----CCCccCHHHhccccccccCCCCcEEEEecchhhc-CCCCceEEEEEeCCHHHHHHHHHHHhccc----
Confidence 9875431 0000011 111 11246 7888999994 4344 69988755554432211111110
Q ss_pred CCCCccCCCCCchHHHHHHHHHHHc-----HHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 381 VSPTVAGSRPGGLIAGAWAALMSLG-----QEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 381 ~~~~~~gsr~~~~ia~~~aal~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
-+ ..++.++...+. .+.+++..++..++++++.+.|+++ ++++
T Consensus 300 --------~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 347 (428)
T 1iay_A 300 --------VS---TQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKC 347 (428)
T ss_dssp --------CC---HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred --------CC---HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcc
Confidence 01 113333333332 2356778888889999999999887 5543
No 126
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.83 E-value=1.2e-19 Score=181.60 Aligned_cols=233 Identities=17% Similarity=0.176 Sum_probs=166.7
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcH---HHHH
Q 013675 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY---DKAA 243 (438)
Q Consensus 167 ~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~---~~a~ 243 (438)
+....+|+.+++++++++|.++.. +++++||+|+.++++++. .+| ++|+++.++|.++ ..++
T Consensus 65 ~~~~~~e~~ar~~la~~~g~~~~~-------i~~~sGt~a~~~~~~~~~-----~~g---d~Vl~~~~~~~~~~~~~~~~ 129 (407)
T 2dkj_A 65 EVIDRVESLAIERAKALFGAAWAN-------VQPHSGSQANMAVYMALM-----EPG---DTLMGMDLAAGGHLTHGSRV 129 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEE-------CCCSSHHHHHHHHHHHHC-----CTT---CEEEEECGGGTCCGGGTCTT
T ss_pred hHHHHHHHHHHHHHHHHhCCCcce-------EEecchHHHHHHHHHHhc-----CCC---CEEEEecccccCccchHHHH
Confidence 333456666778999999997653 455667889999999874 366 8999999999888 4566
Q ss_pred hhcCc--EEEEeeCCC-CCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhh
Q 013675 244 QYFNI--KLWRVPVDK-EFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPF 319 (438)
Q Consensus 244 ~~~Gi--~v~~v~~~~-~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf 319 (438)
+..|. +.+.+++++ ++.+|++++++++++ +|++|+++.|+|| .+.|+++|.++|++||+++++|++|+.+..+
T Consensus 130 ~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~- 206 (407)
T 2dkj_A 130 NFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVA- 206 (407)
T ss_dssp SHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHH-
T ss_pred HhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CCCCHHHHHHHHHHcCCEEEEEccccccccc-
Confidence 66676 444455453 788999999999985 8999998888886 7889999999999999999999999874442
Q ss_pred hhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHH
Q 013675 320 AKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (438)
Q Consensus 320 ~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~a 399 (438)
.|. . .. ....+|+++.++||++.+|.+ |+++.+++++.+........|. .++.....++++.+
T Consensus 207 ---~~~-~--~~-~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~l~~~~~~~~---------~~~~~~~~~~a~~~ 269 (407)
T 2dkj_A 207 ---AGL-H--PN-PLPYAHVVTSTTHKTLRGPRG-GLILSNDPELGKRIDKLIFPGI---------QGGPLEHVIAGKAV 269 (407)
T ss_dssp ---TTC-S--CC-CTTTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHHHTTTT---------CSSCCHHHHHHHHH
T ss_pred ---cCc-c--CC-ccccccEEEEeccccCCCCCc-eEEEECCHHHHHHHHhhhcccc---------cCCCcHHHHHHHHH
Confidence 111 0 01 012379999999998777776 8888875554432211111111 11111122445667
Q ss_pred HHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 400 ALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 400 al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
++..+..+++++..++..++++++.+.|+++ |+++
T Consensus 270 al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 304 (407)
T 2dkj_A 270 AFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRI 304 (407)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-Ccee
Confidence 7766555788999999999999999999887 6543
No 127
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.83 E-value=8.8e-19 Score=174.92 Aligned_cols=233 Identities=16% Similarity=0.155 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHH--HHhcCCCCCeEEecCCCcCcHHHHHhhcCcEE
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYM--RNKRGITRPEMIIPVSAHSAYDKAAQYFNIKL 250 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~--~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v 250 (438)
..++++.+++++|.+ . . +++++||+|+.+++++++... ..++| ++|+++.++|.++..+++..|+++
T Consensus 36 ~~~l~~~la~~~~~~-~-----~--i~~~sGt~a~~~al~~~~~~~~~~~~~g---~~Vi~~~~~~~~~~~~~~~~g~~~ 104 (390)
T 3b8x_A 36 VKQYETQFAKTFGSK-Y-----A--VMVSSGSTANLLMIAALFFTKKPRLKKG---DEIIVPAVSWSTTYYPLQQYGLRV 104 (390)
T ss_dssp HHHHHHHHHHHHTCS-E-----E--EEESCHHHHHHHHHHHTTSSSSCSCCTT---CEEEEESSSCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHCCC-c-----E--EEECCHHHHHHHHHHHHHhhhhcCCCCc---CEEEECCCCcHHHHHHHHHcCCEE
Confidence 334555788888886 2 3 789999999999999873100 01245 899999999999999999999999
Q ss_pred EEeeCCCC-CccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCC
Q 013675 251 WRVPVDKE-FRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPP 329 (438)
Q Consensus 251 ~~v~~~~~-~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~ 329 (438)
+.+|++++ +.+|+++|+++|+++|++|++++ ++|...|+++|.++|+++|+++|+|++++.+..+
T Consensus 105 ~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~----------- 170 (390)
T 3b8x_A 105 KFVDIDINTLNIDIESLKEAVTDSTKAILTVN---LLGNPNNFDEINKIIGGRDIILLEDNCESMGATF----------- 170 (390)
T ss_dssp EEECBCTTTCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEE-----------
T ss_pred EEEecCccccCcCHHHHHHHhCcCCeEEEEEC---CccChhhHHHHHHHHHHcCCEEEEECcCcccCEE-----------
Confidence 99999874 89999999999999999998874 5789999999999999999999999999744332
Q ss_pred CccCCCCc--cE--EEe-CCCCCCCCCCCcEEEEEecccccccc-hhcccccCCC--------------cc---CCCCcc
Q 013675 330 FDFSVQGV--TS--ISV-DVHKYGLAPKGTSVVLYRNREIRKHQ-FVAVTEWSGG--------------LY---VSPTVA 386 (438)
Q Consensus 330 ~~~~~~gv--ds--is~-s~hK~~~~p~g~g~l~~r~~~~~~~~-~~~~~~~~g~--------------~~---~~~~~~ 386 (438)
+....|+ |. ++. ++||+ .+|.| |+++.+++++.+.. ......|.+. .+ ......
T Consensus 171 -~~~~~g~~~~~~~~s~~~~k~~-~~g~g-G~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (390)
T 3b8x_A 171 -NNKCAGTFGLMGTFSSFYSNHI-ATMEG-GCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLP 247 (390)
T ss_dssp -TTEETTSSSSEEEEECCTTSSS-CSSSC-EEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSC
T ss_pred -CCcccccccceEEEEccCCCCC-ccCCc-eEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceecc
Confidence 1111222 33 333 34554 56666 88777764443211 1111111000 00 000112
Q ss_pred CCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 387 GSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 387 gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
|.+.+..-..+++++.. .+.+++..++..++++++.+.|+++|++++
T Consensus 248 g~~~~~~~~~aa~~l~~--l~~l~~~~~~~~~~~~~l~~~L~~~~~~~~ 294 (390)
T 3b8x_A 248 GYNVRPLEMSGAIGIEQ--LKKLPRFISVRRKNAEYFLDKFKDHPYLDV 294 (390)
T ss_dssp CCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTCSSEEE
T ss_pred ccccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 33333332344455443 367788999999999999999999888764
No 128
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.82 E-value=2e-19 Score=179.96 Aligned_cols=232 Identities=16% Similarity=0.152 Sum_probs=165.7
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH-H--H
Q 013675 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK-A--A 243 (438)
Q Consensus 167 ~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~-a--~ 243 (438)
+...++++++++++++++|.++.. +++++||+|+.++++++. ++| ++|+++.+.|.++.. . +
T Consensus 65 ~~~~~l~~~~r~~la~~~g~~~~~-------i~~~sGt~a~~~a~~~~~-----~~g---d~Vl~~~~~~~~~~~~~~~~ 129 (405)
T 2vi8_A 65 EYVDIVEELARERAKQLFGAEHAN-------VQPHSGAQANMAVYFTVL-----EHG---DTVLGMNLSHGGHLTHGSPV 129 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEE-------CCCSSHHHHHHHHHHHHC-----CTT---CEEEEECGGGTCCTTTTCTT
T ss_pred hHHHHHHHHHHHHHHHHhCCCceE-------EEecCcHHHHHHHHHHhc-----CCC---CEEEEecccccchhcccchh
Confidence 456778888999999999998543 455566999999999885 366 899999999988754 2 1
Q ss_pred hhcCc--EEEEeeCC-CCCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhh
Q 013675 244 QYFNI--KLWRVPVD-KEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPF 319 (438)
Q Consensus 244 ~~~Gi--~v~~v~~~-~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf 319 (438)
...|. +++.++++ +++.+|++++++++++ +|++|+++ +++ .|...|+++|.++|++||+++|+|++|+.+..+.
T Consensus 130 ~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~-~~~-~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~ 207 (405)
T 2vi8_A 130 NFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAA-AAA-YPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAA 207 (405)
T ss_dssp SHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEEC-CSS-CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT
T ss_pred hhccceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEEe-CCC-CCccCCHHHHHHHHHHcCCEEEEEcccccccccc
Confidence 23444 88888876 4788999999999986 88888774 333 4677799999999999999999999998444321
Q ss_pred hhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHH
Q 013675 320 AKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (438)
Q Consensus 320 ~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~a 399 (438)
+. .+.. ..++|+++.++||++.+|.| |+++.+ +++.+........| ..|+.....++++.+
T Consensus 208 ----~~--~~~~--~~~~di~~~s~sK~~~g~~g-G~~~~~-~~~~~~l~~~~~~~---------~~~~~~~~~~aa~~~ 268 (405)
T 2vi8_A 208 ----GL--HPNP--VPYAHFVTTTTHKTLRGPRG-GMILCQ-EQFAKQIDKAIFPG---------IQGGPLMHVIAAKAV 268 (405)
T ss_dssp ----TS--SCCS--TTTCSEEEEESSSTTCCCSC-EEEEEC-HHHHHHHHHHHTTT---------TCSSCCHHHHHHHHH
T ss_pred ----Cc--CCCc--cccCCEEEEeccccCCCCCC-eEEEEc-HHHHHHHHhhhccc---------ccCCCCHHHHHHHHH
Confidence 11 1111 23578999999999767888 888776 44433211111111 112222233455566
Q ss_pred HHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 400 ALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 400 al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
++..+..+++++..++..++++++.+.|+++ |+++
T Consensus 269 al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 303 (405)
T 2vi8_A 269 AFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTL 303 (405)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeE
Confidence 7766555688999999999999999999887 6543
No 129
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.82 E-value=4.4e-19 Score=176.41 Aligned_cols=226 Identities=15% Similarity=0.112 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEE
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKL 250 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v 250 (438)
+...++++.+++++|.+ .. +++++||+++..+++++. ++| ++|+++.+.|.++..+++..|.++
T Consensus 84 ~~~~~l~~~la~~~g~~-~~-------i~~~sGt~a~~~~~~~~~-----~~g---d~v~~~~~~~~~~~~~~~~~g~~~ 147 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYS-RA-------LLFISGFAANQAVIAAMM-----AKE---DRIAADRLSHASLLEAASLSPSQL 147 (384)
T ss_dssp HHHHHHHHHHHHHHTCS-EE-------EEESCHHHHHHHHHHHHC-----CTT---CEEEEETTCCHHHHHHHHTSSSEE
T ss_pred HHHHHHHHHHHHHhCCC-cE-------EEeCCcHHHHHHHHHHhC-----CCC---cEEEEcccccHHHHHHHHHcCCCE
Confidence 34556777888889986 32 667777999999998864 366 899999999999999999999999
Q ss_pred EEeeCCCCCccCHHHHHHhhccC---cEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCC
Q 013675 251 WRVPVDKEFRADVKAIKKYINRN---TVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPI 327 (438)
Q Consensus 251 ~~v~~~~~~~~d~~~Le~~I~~~---t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~ 327 (438)
+.+|. .|+++++++++++ +++|++++++||+|.+.|+++|.++|++||+++++|++|+.+... ..|...
T Consensus 148 ~~~~~-----~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~---~~~~~~ 219 (384)
T 1bs0_A 148 RRFAH-----NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIG---EQGRGS 219 (384)
T ss_dssp EEECT-----TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSS---GGGCCH
T ss_pred EEeCC-----CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceec---CCCCch
Confidence 99984 4899999999763 889999999999999999999999999999999999999654321 001000
Q ss_pred CCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHH
Q 013675 328 PPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQE 407 (438)
Q Consensus 328 p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~ 407 (438)
.+....+.|+++.++||+ ++|.| |+++.+ +++.+........|... ++.+....+++.++++.+...
T Consensus 220 --~~~~~~~~di~~~s~sK~-~~~~G-G~~~~~-~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~~al~~~~~~ 286 (384)
T 1bs0_A 220 --CWLQKVKPELLVVTFGKG-FGVSG-AAVLCS-STVADYLLQFARHLIYS--------TSMPPAQAQALRASLAVIRSD 286 (384)
T ss_dssp --HHHTTCCCSEEEEESSST-TSSCC-EEEEEC-HHHHHHHHHHCHHHHSS--------BCCCHHHHHHHHHHHHHHHSH
T ss_pred --HHhcCCCCcEEEeeccch-hhccC-cEEEeC-HHHHHHHHHhchhhhcC--------CCCCHHHHHHHHHHHHHHhcc
Confidence 011113578999999999 56877 887775 44433211111111110 011112233445566554222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 408 GYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 408 g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
+.++..++..++++++.+.|+++ +++
T Consensus 287 ~~~~~~~~~~~~~~~l~~~L~~~-g~~ 312 (384)
T 1bs0_A 287 EGDARREKLAALITRFRAGVQDL-PFT 312 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTS-SCE
T ss_pred ccHHHHHHHHHHHHHHHHHHHhc-CCc
Confidence 56788889999999999999886 444
No 130
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.82 E-value=2.2e-19 Score=179.68 Aligned_cols=226 Identities=16% Similarity=0.104 Sum_probs=160.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEE
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKL 250 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v 250 (438)
....++++.+++++|.+ .. +++++||+|+..+++++. ++| ++|+++.+.|.++..+++..|+++
T Consensus 90 ~~~~~l~~~la~~~g~~-~~-------i~~~sGs~a~~~~~~~~~-----~~g---d~v~~~~~~~~~~~~~~~~~g~~~ 153 (401)
T 1fc4_A 90 DSHKELEQKLAAFLGME-DA-------ILYSSCFDANGGLFETLL-----GAE---DAIISDALNHASIIDGVRLCKAKR 153 (401)
T ss_dssp HHHHHHHHHHHHHHTCS-EE-------EEESCHHHHHHTTHHHHC-----CTT---CEEEEETTCCHHHHHHHHTSCSEE
T ss_pred HHHHHHHHHHHHHhCCC-cE-------EEeCChHHHHHHHHHHHc-----CCC---CEEEEcchhHHHHHHHHHHcCCce
Confidence 44567777899999987 33 566778999999888864 366 899999999999999999999999
Q ss_pred EEeeCCCCCccCHHHHHHhhcc------CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEecccc-chhhhhhhhc
Q 013675 251 WRVPVDKEFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLG-GFVLPFAKKL 323 (438)
Q Consensus 251 ~~v~~~~~~~~d~~~Le~~I~~------~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~g-g~~~pf~~~~ 323 (438)
+.+|. +|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|+++++|++|+ ++..+ .
T Consensus 154 ~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~----~ 224 (401)
T 1fc4_A 154 YRYAN-----NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGE----N 224 (401)
T ss_dssp EEECT-----TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSST----T
T ss_pred EEECC-----CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCC----C
Confidence 98874 489999999975 79999999999999999999999999999999999999996 55321 0
Q ss_pred CCCCCC-CccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHH
Q 013675 324 GYPIPP-FDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALM 402 (438)
Q Consensus 324 g~~~p~-~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~ 402 (438)
|...++ ++.. .++|+++.++||++.++.| |+++.+ +++.+........|. ..++.+....+++.++++
T Consensus 225 g~~~~~~~~~~-~~~di~~~s~sK~~~~~~g-G~~~~~-~~~~~~l~~~~~~~~--------~~~~~~~~~~~a~~~~l~ 293 (401)
T 1fc4_A 225 GRGSHEYCDVM-GRVDIITGTLGKALGGASG-GYTAAR-KEVVEWLRQRSRPYL--------FSNSLAPAIVAASIKVLE 293 (401)
T ss_dssp SCCHHHHTTCT-TCCSEEEEESSSTTCSSSC-EEEEEC-HHHHHHHHHHCHHHH--------HSCCCCHHHHHHHHHHHH
T ss_pred CCccHHHcCCC-cCCcEEEecchhhccCCCC-EEEEcC-HHHHHHHHHhCcCce--------eCCCCCHHHHHHHHHHHH
Confidence 100000 2222 3679999999999657776 887775 444332211111110 011111222334444554
Q ss_pred HHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 403 SLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 403 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+. ..++..++..++++++.+.|+++ ++++
T Consensus 294 ~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 323 (401)
T 1fc4_A 294 MVE--AGSELRDRLWANARQFREQMSAA-GFTL 323 (401)
T ss_dssp HHH--TCHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred HHh--cCHHHHHHHHHHHHHHHHHHHHc-CCcc
Confidence 432 14677888899999999999887 5543
No 131
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.82 E-value=2.2e-19 Score=180.57 Aligned_cols=210 Identities=16% Similarity=0.131 Sum_probs=150.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH----HHhhcCcE
Q 013675 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK----AAQYFNIK 249 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~----a~~~~Gi~ 249 (438)
.++++.+++++|.+ .. +++++|++|+.++++ +. ++| ++|+++.+.|.+... .++..|++
T Consensus 70 ~~l~~~la~~~g~~-~~-------i~~~sG~~ai~~~~~-l~-----~~g---d~Vl~~~~~y~~~~~~~~~~~~~~G~~ 132 (403)
T 3cog_A 70 NCLEKAVAALDGAK-YC-------LAFASGLAATVTITH-LL-----KAG---DQIICMDDVYGGTNRYFRQVASEFGLK 132 (403)
T ss_dssp HHHHHHHHHHHTCS-EE-------EEESCHHHHHHHHHT-TS-----CTT---CEEEEESSCCHHHHHHHHHTGGGGTCE
T ss_pred HHHHHHHHHHhCCC-cE-------EEECCHHHHHHHHHH-Hh-----CCC---CEEEEeCCCcchHHHHHHHHHHHcCCE
Confidence 34555788888886 32 455566899998887 53 367 899999999988444 34678999
Q ss_pred EEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcC-CeEEEeccccchhhhhhhhcCCCCC
Q 013675 250 LWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHG-TCLHVDLCLGGFVLPFAKKLGYPIP 328 (438)
Q Consensus 250 v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~-i~lhVD~a~gg~~~pf~~~~g~~~p 328 (438)
++.+|.+ |+++++++|+++|++|++++|+||+|.+.|+++|+++|+++| +++++|++|+.+... .
T Consensus 133 v~~v~~~-----d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~--------~- 198 (403)
T 3cog_A 133 ISFVDCS-----KIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQ--------R- 198 (403)
T ss_dssp EEEECTT-----SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTC--------C-
T ss_pred EEEECCC-----CHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccC--------C-
Confidence 9999876 899999999999999999999999999999999999999999 999999999765420 1
Q ss_pred CCccCCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcH
Q 013675 329 PFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ 406 (438)
Q Consensus 329 ~~~~~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~ 406 (438)
+++ .++|+++.++||++.+|.+ +|+++.+++++.+........|.. ... ...+|++++.+
T Consensus 199 ~~~---~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~-----------~~~--~~~~~~~~~~l-- 260 (403)
T 3cog_A 199 PLA---LGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGA-----------VPS--PIDCYLCNRGL-- 260 (403)
T ss_dssp TTT---TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCC-----------CCC--HHHHHHHHHHH--
T ss_pred ccc---cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCC-----------CCC--HHHHHHHHhhh--
Confidence 233 4789999999999777776 488887765554322111111111 111 22566655433
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC
Q 013675 407 EGYLENTKAIMEVSESIQKGLVLFPM 432 (438)
Q Consensus 407 ~g~~~~~~~~~~~a~~l~~~L~~~~g 432 (438)
+.+..+.++..+++..+.+.|++.|.
T Consensus 261 ~~l~~r~~~~~~n~~~l~~~l~~~~~ 286 (403)
T 3cog_A 261 KTLHVRMEKHFKNGMAVAQFLESNPW 286 (403)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 33444556666666666666665543
No 132
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.82 E-value=4.1e-19 Score=177.25 Aligned_cols=213 Identities=18% Similarity=0.145 Sum_probs=155.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH----HhhcCc
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA----AQYFNI 248 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a----~~~~Gi 248 (438)
..++++.+++++|.+ +. +++++||+|+.++++++. ++| ++|+++.+.|.+.... ++..|+
T Consensus 54 ~~~l~~~la~~~~~~-~~-------i~~~sGt~a~~~~~~~~~-----~~g---~~vl~~~~~~~~~~~~~~~~~~~~g~ 117 (386)
T 1cs1_A 54 RDVVQRALAELEGGA-GA-------VLTNTGMSAIHLVTTVFL-----KPG---DLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_dssp HHHHHHHHHHHHTCS-EE-------EEESSHHHHHHHHHHHHC-----CTT---CEEEEETTCCHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHhCCC-cE-------EEeCCHHHHHHHHHHHHh-----CCC---CEEEEecCCcHhHHHHHHHHHHhcCC
Confidence 445666788889886 33 444566999999999874 256 8999999999985443 467799
Q ss_pred EEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCC
Q 013675 249 KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIP 328 (438)
Q Consensus 249 ~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p 328 (438)
+++.+|.+ |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++|+|++++++..+ .
T Consensus 118 ~~~~~~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~--------~- 183 (386)
T 1cs1_A 118 RVLFVDQG-----DEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQ--------N- 183 (386)
T ss_dssp EEEEECTT-----CHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC--------C-
T ss_pred EEEEeCCC-----CHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC--------C-
Confidence 99999874 899999999999999999999999999999999999999999999999999876542 1
Q ss_pred CCccCCCCccEEEeCCCCCCCCCCCc--EEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcH
Q 013675 329 PFDFSVQGVTSISVDVHKYGLAPKGT--SVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ 406 (438)
Q Consensus 329 ~~~~~~~gvdsis~s~hK~~~~p~g~--g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~ 406 (438)
++ ..++|+++.++||++.+|.+. |+++.+++++.+........|.+ .. ...++++++..+
T Consensus 184 ~~---~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~-----------~~--~~~~~~~~~~~l-- 245 (386)
T 1cs1_A 184 PL---ALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGV-----------TG--GAFDSYLLLRGL-- 245 (386)
T ss_dssp GG---GGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTC-----------BC--CHHHHHHHHHHH--
T ss_pred cc---ccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCC-----------CC--CHHHHHHHHhcc--
Confidence 12 246899999999997777763 88888764443321111111111 00 122445544332
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 013675 407 EGYLENTKAIMEVSESIQKGLVLFPMF 433 (438)
Q Consensus 407 ~g~~~~~~~~~~~a~~l~~~L~~~~g~ 433 (438)
+.+.+..++..++++++.+.|++++.+
T Consensus 246 ~~~~~~~~~~~~~~~~l~~~l~~~~~l 272 (386)
T 1cs1_A 246 RTLVPRMELAQRNAQAIVKYLQTQPLV 272 (386)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTCTTE
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 345566677777888888888776554
No 133
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.82 E-value=1.4e-18 Score=179.63 Aligned_cols=245 Identities=11% Similarity=0.108 Sum_probs=172.8
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcC
Q 013675 160 PLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (438)
Q Consensus 160 ~~~~~~~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~ 237 (438)
...|...++..++++++.+++.+..|.+ +++ + ++|+|+++++.+++.++.. .+| ++|+++.+.|+
T Consensus 127 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~----i--~~t~G~~~al~~~~~~l~~----~~g---d~Vlv~~p~y~ 193 (500)
T 3tcm_A 127 TGAYSHSQGIHGLRDAIASGIASRDGFPANADD----I--FLTDGASPGVHLMMQLLIR----NEK---DGILVPIPQYP 193 (500)
T ss_dssp SSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGG----E--EEESSSHHHHHHHHHHHCC----STT---EEEEEEESCCT
T ss_pred CCCcCCCcChHHHHHHHHHHHHhhcCCCCCccc----E--EEcCCHHHHHHHHHHHHcC----CCC---CEEEEeCCCcH
Confidence 4456667788889999999998888854 443 6 8999999999999998741 256 89999999999
Q ss_pred cHHHHHhhcCcEEEEeeCCC--CCccCHHHHHHhhcc------CcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeE
Q 013675 238 AYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCL 306 (438)
Q Consensus 238 s~~~a~~~~Gi~v~~v~~~~--~~~~d~~~Le~~I~~------~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~l 306 (438)
++..+++..|++++.+++++ ++.+|+++|++++++ ++++|++++|+||||.+.+ +++|+++|++||+++
T Consensus 194 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~l 273 (500)
T 3tcm_A 194 LYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVL 273 (500)
T ss_dssp HHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred hHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 99999999999999999986 469999999999987 7899999999999999966 667777799999999
Q ss_pred EEeccccchhhhhhhhcCCCCCCCc-----c--CCCCcc-EEEeCCCCCCCCC--CCcEEEEEe--cccccccchhcccc
Q 013675 307 HVDLCLGGFVLPFAKKLGYPIPPFD-----F--SVQGVT-SISVDVHKYGLAP--KGTSVVLYR--NREIRKHQFVAVTE 374 (438)
Q Consensus 307 hVD~a~gg~~~pf~~~~g~~~p~~~-----~--~~~gvd-sis~s~hK~~~~p--~g~g~l~~r--~~~~~~~~~~~~~~ 374 (438)
++|++|+.+... . +...+++. + ....+. ++..|++|.++++ ..+|+++.. ++++..........
T Consensus 274 i~Deay~~~~~~--~--~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~ 349 (500)
T 3tcm_A 274 LADEVYQENIYV--D--NKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASV 349 (500)
T ss_dssp EEECTTTTCBCC--T--TCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHT
T ss_pred EEecCccccccC--C--CCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhc
Confidence 999999875431 0 00011110 1 022233 4556889985343 447888773 44444322111110
Q ss_pred cCCCccCCCCccCCCCCchHHHHHHHHHHH------------cHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 375 WSGGLYVSPTVAGSRPGGLIAGAWAALMSL------------GQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 375 ~~g~~~~~~~~~gsr~~~~ia~~~aal~~~------------g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+ ......++.++...+ -.+...++.++..++++++.+.|+++||+++
T Consensus 350 ~--------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~ 408 (500)
T 3tcm_A 350 N--------------LCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITC 408 (500)
T ss_dssp T--------------CCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred c--------------cCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 0 001111222222222 1234567778888999999999999988765
No 134
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.82 E-value=4.4e-19 Score=180.84 Aligned_cols=242 Identities=13% Similarity=0.067 Sum_probs=168.7
Q ss_pred cccchhHHHHHHHHHHHHHHHhCC-CCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGN-KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK 241 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~-~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~ 241 (438)
|...++..++++.+.+++.+.+|. ++++ + ++|+|+++|+.++++++.+ +| ++|+++.++|.++..
T Consensus 114 Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~----v--~~t~G~~~al~~~~~~l~~-----~G---d~Vlv~~p~y~~~~~ 179 (448)
T 3aow_A 114 YGTTKGFTPLRETLMKWLGKRYGISQDND----I--MITSGSQQALDLIGRVFLN-----PG---DIVVVEAPTYLAALQ 179 (448)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCTTSE----E--EEESSHHHHHHHHHHHHCC-----TT---CEEEEEESCCHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHhcCcCChhh----E--EEeCcHHHHHHHHHHHHcC-----CC---CEEEEeCCChHHHHH
Confidence 333456677888888887777798 4443 6 8999999999999999753 67 899999999999999
Q ss_pred HHhhcCcEEEEeeCCCCCccCHHHHHHhhc----c--CcEEE-EEecCCCCCccccC---HHHHHHHHHHcCCeEEEecc
Q 013675 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYIN----R--NTVLI-VGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLC 311 (438)
Q Consensus 242 a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~----~--~t~~v-v~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a 311 (438)
+++..|++++.+|+++++ +|+++|+++++ + ++++| ++++++||||.+.+ +++|.++|++||+++++|++
T Consensus 180 ~~~~~g~~~~~v~~~~~g-~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~ 258 (448)
T 3aow_A 180 AFNFYEPQYIQIPLDDEG-MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDP 258 (448)
T ss_dssp HHHTTCCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECS
T ss_pred HHHHcCCEEEEeccCCCC-CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECC
Confidence 999999999999998765 99999999998 6 78887 57899999999977 56899999999999999999
Q ss_pred ccchhhhhhhhcCCCCCCC-ccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCC
Q 013675 312 LGGFVLPFAKKLGYPIPPF-DFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (438)
Q Consensus 312 ~gg~~~pf~~~~g~~~p~~-~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~ 390 (438)
|+.+... |...+++ .+...+.+++..+++|++..+..+|+++.+ +++.+........+.. + -+
T Consensus 259 y~~~~~~-----g~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~-~~l~~~l~~~~~~~~~---------~-~~ 322 (448)
T 3aow_A 259 YGELRYS-----GNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGD-PGIIRKMEIAKQSTDL---------C-TN 322 (448)
T ss_dssp CTTCBCS-----SCCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEEC-HHHHHHHHHHHHHHHS---------S-CC
T ss_pred CccccCC-----CCCCcCHHhcCCCCCEEEEccchhhccccccEEEEEeC-HHHHHHHHHHHHHhcC---------C-CC
Confidence 9876431 1111122 222345678888899995422237998876 4443321111111000 0 01
Q ss_pred CchHHHHHHHHHHHc-HHHHHHHHHHHHHHHHHHHHHhhc-CC-Cccc
Q 013675 391 GGLIAGAWAALMSLG-QEGYLENTKAIMEVSESIQKGLVL-FP-MFLP 435 (438)
Q Consensus 391 ~~~ia~~~aal~~~g-~~g~~~~~~~~~~~a~~l~~~L~~-~~-g~~~ 435 (438)
....+++..+++..+ .+.+++..++..++++++.+.|++ +| ++++
T Consensus 323 ~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~ 370 (448)
T 3aow_A 323 VFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKW 370 (448)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEE
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 111222333332211 344667777777889999999986 56 5653
No 135
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.82 E-value=1.7e-19 Score=182.36 Aligned_cols=233 Identities=14% Similarity=0.096 Sum_probs=165.0
Q ss_pred cchhHHHHHHHHHHHHHHHhCC---CCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH
Q 013675 165 IFQSVARFEAEVIAMTAALLGN---KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK 241 (438)
Q Consensus 165 ~~~~~~~~e~~~~~~~a~l~g~---~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~ 241 (438)
..++..++++++.+++.+.+|. ++++ + ++|+|+++++.++++++. .+| ++|+++.++|.++..
T Consensus 83 ~~~g~~~lr~~la~~l~~~~g~~~~~~~~----v--~~t~G~~~al~~~~~~l~-----~~g---d~Vl~~~p~y~~~~~ 148 (425)
T 1vp4_A 83 TTEGDPVLKQQILKLLERMYGITGLDEDN----L--IFTVGSQQALDLIGKLFL-----DDE---SYCVLDDPAYLGAIN 148 (425)
T ss_dssp CTTCCHHHHHHHHHHHHHHHCCCSCCGGG----E--EEEEHHHHHHHHHHHHHC-----CTT---CEEEEEESCCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhccCCCCCCccc----E--EEeccHHHHHHHHHHHhC-----CCC---CEEEEeCCCcHHHHH
Confidence 3455677888888888777784 4444 5 899999999999999875 366 899999999999999
Q ss_pred HHhhcCcEEEEeeCCCCCccCHHHHHHhhcc--------CcEEE-EEecCCCCCccccC---HHHHHHHHHHcCCeEEEe
Q 013675 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYINR--------NTVLI-VGSAPGFPHGIIDP---IQELGELALSHGTCLHVD 309 (438)
Q Consensus 242 a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~--------~t~~v-v~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD 309 (438)
.++..|++++.+|+++++ +|+++|++++++ ++++| ++++|+||||.+.| +++|+++|+++|+++++|
T Consensus 149 ~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~D 227 (425)
T 1vp4_A 149 AFRQYLANFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVED 227 (425)
T ss_dssp HHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHcCCEEEEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 999999999999997764 999999999976 78887 57999999999976 578999999999999999
Q ss_pred ccccchhhhhhhhcCCCCCCC-ccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCC
Q 013675 310 LCLGGFVLPFAKKLGYPIPPF-DFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGS 388 (438)
Q Consensus 310 ~a~gg~~~pf~~~~g~~~p~~-~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gs 388 (438)
++|+++... |...+++ .+...+.+++..+++|++..+..+|+++.+ +++.+........+.. +
T Consensus 228 e~~~~~~~~-----g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~----------~ 291 (425)
T 1vp4_A 228 DPYGALRYE-----GETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGS-KEFIRKIVQAKQSADL----------C 291 (425)
T ss_dssp CSSTTCBCS-----SCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECC-HHHHHHHHHHHHHHHS----------S
T ss_pred CCCccccCC-----CCCCcCHHHhCCCCCEEEEeccccccccccceEEEeeC-HHHHHHHHHHhhhhcC----------C
Confidence 999876431 1101111 112234578888999995422337988876 4443321111111100 0
Q ss_pred CCCchHHHHHHHHHHHc----HHHHHHHHHHHHHHHHHHHHHhhc-CC
Q 013675 389 RPGGLIAGAWAALMSLG----QEGYLENTKAIMEVSESIQKGLVL-FP 431 (438)
Q Consensus 389 r~~~~ia~~~aal~~~g----~~g~~~~~~~~~~~a~~l~~~L~~-~~ 431 (438)
-+ ..+++++...+. .+.+++..++..++++++.+.|++ .|
T Consensus 292 ~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 336 (425)
T 1vp4_A 292 SP---AITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFS 336 (425)
T ss_dssp CC---HHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHST
T ss_pred CC---HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 01 123333333332 345677778888899999999987 35
No 136
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.82 E-value=1.2e-18 Score=170.02 Aligned_cols=218 Identities=11% Similarity=0.020 Sum_probs=158.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEe
Q 013675 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v 253 (438)
.++++.+++++|.++++ + ++|+|+|+++.+++.++ +| ++|+++.++|.++...++..|++++.+
T Consensus 54 ~~lr~~la~~~~~~~~~----i--~~t~G~~~~l~~~~~~~-------~g---d~vl~~~p~~~~~~~~~~~~g~~~~~v 117 (337)
T 3p1t_A 54 PRVMRKLAEHFSCPEDN----L--MLVRGIDECFDRISAEF-------SS---MRFVTAWPGFDGYRARIAVSGLRHFEI 117 (337)
T ss_dssp HHHHHHHHHHHTSCGGG----E--EEESHHHHHHHHHHHHS-------TT---SEEEEESSSCSHHHHHHTTSCCEEEEE
T ss_pred HHHHHHHHHHhCcCHHH----E--EEeCCHHHHHHHHHHhc-------CC---CeEEEeCCCcHHHHHHHHHcCCEEEEe
Confidence 45566788889988765 6 89999999999988875 45 899999999999999999999999999
Q ss_pred eCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccC
Q 013675 254 PVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS 333 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~ 333 (438)
|+++++.+|+++++++ .+++++++++|+||||.+.|++++.++|+++++ +++|++|+++... + .....
T Consensus 118 ~~~~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~-----~----~~~~~ 185 (337)
T 3p1t_A 118 GLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSF-----R----ARGLA 185 (337)
T ss_dssp CBCTTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSC-----S----SSCCC
T ss_pred cCCCCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccc-----c----ccccc
Confidence 9988899999999987 568999999999999999999999999999997 6669999764321 1 11122
Q ss_pred CCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHHHHHHH
Q 013675 334 VQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLEN 412 (438)
Q Consensus 334 ~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~ 412 (438)
..+.+++..+++|++. .+.++|+++.++ ++.......... ++-+....+++.++++ ..+.+.+.
T Consensus 186 ~~~~~i~~~S~sK~~g~~G~r~G~~~~~~-~~~~~l~~~~~~------------~~~~~~~~~a~~~~l~--~~~~~~~~ 250 (337)
T 3p1t_A 186 YGENELVFRSFSKSYGLAGLRLGALFGPS-ELIAAMKRKQWF------------CNVGTLDLHALEAALD--NDRAREAH 250 (337)
T ss_dssp CBTTEEEEEESSSTTCCTTTCCEEEECCH-HHHHHHHTTSCT------------TCSCHHHHHHHHHHHT--CHHHHHHH
T ss_pred cCCCEEEEeeCchhccCcchheEEEEeCH-HHHHHHHhhcCC------------CCCCHHHHHHHHHHhC--CHHHHHHH
Confidence 3356788999999953 445678876643 333221111000 0011111223333332 22456777
Q ss_pred HHHHHHHHHHHHHHhhcCCCccc
Q 013675 413 TKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 413 ~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.++..++++++.+.|+++ ++++
T Consensus 251 ~~~~~~~~~~l~~~L~~~-g~~~ 272 (337)
T 3p1t_A 251 IAKTLAQRRRVADALRGL-GYRV 272 (337)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCB
T ss_pred HHHHHHHHHHHHHHHHHC-cCEE
Confidence 888888899999999887 5543
No 137
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.82 E-value=4.2e-19 Score=179.92 Aligned_cols=237 Identities=12% Similarity=0.096 Sum_probs=163.8
Q ss_pred chhHHHHHHHHHHHHHHHhC----CCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH
Q 013675 166 FQSVARFEAEVIAMTAALLG----NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK 241 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g----~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~ 241 (438)
.++..++++++.+++.+..+ .++++ + ++|+|||+|+..++++++. +| ++|+++.+.|.++..
T Consensus 85 ~~g~~~l~~~la~~~~~~~~~~~~~~~~~----v--~~~~gg~~a~~~~~~~l~~-----~g---d~vl~~~p~~~~~~~ 150 (435)
T 3piu_A 85 YHGLPAFKKAMVDFMAEIRGNKVTFDPNH----L--VLTAGATSANETFIFCLAD-----PG---EAVLIPTPYYPGFDR 150 (435)
T ss_dssp TTCCHHHHHHHHHHHHHHTTTSSCCCGGG----E--EEEEHHHHHHHHHHHHHCC-----TT---CEEEEEESCCTTHHH
T ss_pred CCCcHHHHHHHHHHHHHhhCCCCCCCHHH----E--EEcCChHHHHHHHHHHhcC-----CC---CeEEECCCccccHHH
Confidence 34556777777777776655 44444 5 8999999999999998863 67 899999999999999
Q ss_pred HHh-hcCcEEEEeeCCC--CCccCHHHHHHhhcc------CcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEe
Q 013675 242 AAQ-YFNIKLWRVPVDK--EFRADVKAIKKYINR------NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVD 309 (438)
Q Consensus 242 a~~-~~Gi~v~~v~~~~--~~~~d~~~Le~~I~~------~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD 309 (438)
.+. ..|.+++.+|.++ ++.+|+++|++++++ ++++|++++|+||||.+.+ +++|+++|++||+++++|
T Consensus 151 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~D 230 (435)
T 3piu_A 151 DLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISD 230 (435)
T ss_dssp HTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 888 7899999999985 567999999999986 8999999999999999966 578888999999999999
Q ss_pred ccccchhhhhhhhcCCCCCCC-cc-CC---------CCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCC
Q 013675 310 LCLGGFVLPFAKKLGYPIPPF-DF-SV---------QGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSG 377 (438)
Q Consensus 310 ~a~gg~~~pf~~~~g~~~p~~-~~-~~---------~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g 377 (438)
++|+++... +.....+ .. .. ...+++..++||.+. .+..+|+++.+++.+..........+.
T Consensus 231 ea~~~~~~~-----~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~- 304 (435)
T 3piu_A 231 EIYSGTAFS-----SPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGL- 304 (435)
T ss_dssp CTTGGGCCS-----SSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGGSC-
T ss_pred ccccccccC-----CCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhcCC-
Confidence 999875431 0000000 00 01 223478889999953 445589988866554332111111000
Q ss_pred CccCCCCccCCCCCchHHHHHHHHHHHc--HHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 378 GLYVSPTVAGSRPGGLIAGAWAALMSLG--QEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 378 ~~~~~~~~~gsr~~~~ia~~~aal~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
-+....+++.+++.... .+.+++..++..++++++.+.|++. +++
T Consensus 305 -----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 351 (435)
T 3piu_A 305 -----------VSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GIS 351 (435)
T ss_dssp -----------CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCE
T ss_pred -----------CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc
Confidence 00111112222222111 2345677788888999999999876 554
No 138
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.82 E-value=1.4e-18 Score=175.71 Aligned_cols=238 Identities=10% Similarity=0.020 Sum_probs=165.7
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCC--------CCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcC
Q 013675 166 FQSVARFEAEVIAMTAALLGNKEK--------ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~~--------~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~ 237 (438)
..+..++.+++.+++.+.+|.+.. + ++ ++|+|+++|+.++++++.+ +| ++|+++.++|+
T Consensus 77 ~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~---~i--~~t~G~~~al~~~~~~l~~-----~g---d~Vlv~~p~y~ 143 (425)
T 2r2n_A 77 SAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQM---DL--CVTSGSQQGLCKVFEMIIN-----PG---DNVLLDEPAYS 143 (425)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCE---EE--EEESSHHHHHHHHHHHHCC-----TT---CEEEEESSCCH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCccccccCCcC---cE--EEeCcHHHHHHHHHHHhCC-----CC---CEEEEeCCCcH
Confidence 345567788888899998898641 2 26 9999999999999999763 67 89999999999
Q ss_pred cHHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhc------------cCcEEEEE-ecCCCCCccccCHH---HHHHHHHH
Q 013675 238 AYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYIN------------RNTVLIVG-SAPGFPHGIIDPIQ---ELGELALS 301 (438)
Q Consensus 238 s~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~------------~~t~~vv~-~~~~~~tG~iddi~---~I~~la~~ 301 (438)
.+...++..|++++.+|++++ .+|+++|+++++ +++++|++ ++++||||.+.|.+ +|+++|++
T Consensus 144 ~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~ 222 (425)
T 2r2n_A 144 GTLQSLHPLGCNIINVASDES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARK 222 (425)
T ss_dssp HHHHHHGGGTCEEEEECEETT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEeCcCCC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHH
Confidence 999999999999999998765 499999999997 35788765 68999999998855 99999999
Q ss_pred cCCeEEEeccccchhhhhhhhcCCCCCC-CccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCcc
Q 013675 302 HGTCLHVDLCLGGFVLPFAKKLGYPIPP-FDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLY 380 (438)
Q Consensus 302 ~~i~lhVD~a~gg~~~pf~~~~g~~~p~-~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~ 380 (438)
||+++++|++|+.+... |...++ ..+...+.+++..+++|++..+..+|+++.+++ +..........+.
T Consensus 223 ~~~~li~De~~~~~~~~-----g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~-l~~~l~~~~~~~~---- 292 (425)
T 2r2n_A 223 YDFLIIEDDPYYFLQFN-----KFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKP-LIERVILHIQVST---- 292 (425)
T ss_dssp TTCEEEEECTTGGGBSS-----SSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHH-HHHHHHHHHHTTT----
T ss_pred cCCEEEEECCcccccCC-----CCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHH-HHHHHHHHHHHhc----
Confidence 99999999999865431 110111 222223457888899999542233799887753 3322111110000
Q ss_pred CCCCccCCCCCchHHHHHHHHHHHcH----HHHHHHHHHHHHHHHHHHHHhhc-CCCc
Q 013675 381 VSPTVAGSRPGGLIAGAWAALMSLGQ----EGYLENTKAIMEVSESIQKGLVL-FPMF 433 (438)
Q Consensus 381 ~~~~~~gsr~~~~ia~~~aal~~~g~----~g~~~~~~~~~~~a~~l~~~L~~-~~g~ 433 (438)
++-+....+++..++..++. +.+++..++..++++++.+.|++ +|++
T Consensus 293 ------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 344 (425)
T 2r2n_A 293 ------LHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGL 344 (425)
T ss_dssp ------CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred ------CCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 01111112233344443332 33556667777888888898887 5665
No 139
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.81 E-value=3.3e-19 Score=179.64 Aligned_cols=241 Identities=15% Similarity=0.104 Sum_probs=171.8
Q ss_pred cccchhHHHHHHHHHHHHHHHhCCCC---CCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcH
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGNKE---KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY 239 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~~~---~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~ 239 (438)
|....+..++++++.+++.+.+|.+. ++ + ++|+|||+|+..+++++. ++| ++|+++.+.|.++
T Consensus 63 y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~----i--~~~~g~~~a~~~~~~~~~-----~~g---d~vl~~~p~~~~~ 128 (422)
T 3fvs_A 63 YTKTFGYPPLTKILASFFGELLGQEIDPLRN----V--LVTVGGYGALFTAFQALV-----DEG---DEVIIIEPFFDCY 128 (422)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHTCCCCHHHH----E--EEESHHHHHHHHHHHHHC-----CTT---CEEEEEESCCTTH
T ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCCCCCc----E--EEECChHHHHHHHHHHHc-----CCC---CEEEEcCCCchhh
Confidence 43344567788888899998888653 23 5 899999999999999875 366 8999999999999
Q ss_pred HHHHhhcCcEEEEeeCCC------------CCccCHHHHHHhhccCcEEEEEecCCCCCcccc---CHHHHHHHHHHcCC
Q 013675 240 DKAAQYFNIKLWRVPVDK------------EFRADVKAIKKYINRNTVLIVGSAPGFPHGIID---PIQELGELALSHGT 304 (438)
Q Consensus 240 ~~a~~~~Gi~v~~v~~~~------------~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~id---di~~I~~la~~~~i 304 (438)
...++..|.+++.+|+++ ++.+|++++++++++++++|++++|+||+|.+. ++++|+++|++||+
T Consensus 129 ~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~ 208 (422)
T 3fvs_A 129 EPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDV 208 (422)
T ss_dssp HHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCc
Confidence 999999999999999875 457999999999999999999999999999998 48999999999999
Q ss_pred eEEEeccccchhhhhhhhcCCCCCCCc-cC-CCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccC
Q 013675 305 CLHVDLCLGGFVLPFAKKLGYPIPPFD-FS-VQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYV 381 (438)
Q Consensus 305 ~lhVD~a~gg~~~pf~~~~g~~~p~~~-~~-~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~ 381 (438)
++++|++|+++... |...+++. .. ..+.+++..+++|.+. .+.++|+++.+++ +.......... ..
T Consensus 209 ~li~De~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~---~~-- 277 (422)
T 3fvs_A 209 VCITDEVYQWMVYD-----GHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDH-IMKHLRTVHQN---SV-- 277 (422)
T ss_dssp EEEEECTTTTCBCT-----TCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHH-HHHHHHHHHHT---TT--
T ss_pred EEEEEccchhhccC-----CCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHH-HHHHHHHHHhh---cc--
Confidence 99999999875531 11000111 11 1245688889999943 3355898776543 32221111000 00
Q ss_pred CCCccCCCCCchHHHHHHHHHH------HcHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 382 SPTVAGSRPGGLIAGAWAALMS------LGQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 382 ~~~~~gsr~~~~ia~~~aal~~------~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
.+-+....+++.+++.. ...+.+++..++..++++++.+.|+++ |++
T Consensus 278 -----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 330 (422)
T 3fvs_A 278 -----FHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLK 330 (422)
T ss_dssp -----CCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TCE
T ss_pred -----CCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc-CCe
Confidence 00111112233333332 123567888889999999999999887 554
No 140
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.81 E-value=7.6e-19 Score=175.33 Aligned_cols=237 Identities=14% Similarity=0.139 Sum_probs=168.7
Q ss_pred cccchhHHHHHHHHHHHHHHHhCCC---CC-CCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCC--CCCeEEecCCCc
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGNK---EK-ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI--TRPEMIIPVSAH 236 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~~---~~-~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~--~~~~Viv~~~~h 236 (438)
+....+..++++++.+++.+.+|.+ ++ + + ++|+|+++++.++++++.. +|- .+++|+++.++|
T Consensus 62 y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~----i--~~t~g~~~al~~~~~~~~~-----~g~~~~~d~vl~~~p~~ 130 (396)
T 3jtx_A 62 YPLTAGLPELRQACANWLKRRYDGLTVDADNE----I--LPVLGSREALFSFVQTVLN-----PVSDGIKPAIVSPNPFY 130 (396)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTS----E--EEESSHHHHHHHHHHHHCC-----C---CCCCEEEEEESCC
T ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCe----E--EEcCCcHHHHHHHHHHHhC-----CCCccCCCEEEEcCCCc
Confidence 3334456788888999999988864 55 4 6 8999999999999998863 330 125899999999
Q ss_pred CcHHHHHhhcCcEEEEeeCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccCHH---HHHHHHHHcCCeEEEeccc
Q 013675 237 SAYDKAAQYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQ---ELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 237 ~s~~~a~~~~Gi~v~~v~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~---~I~~la~~~~i~lhVD~a~ 312 (438)
.++...++..|++++.+|+++ ++.+|++++++++++++++|++++|+||||.+.|.+ +|+++|++||+++++|++|
T Consensus 131 ~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 210 (396)
T 3jtx_A 131 QIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECY 210 (396)
T ss_dssp HHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTT
T ss_pred HhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 999999999999999999965 557899999999999999999999999999998755 5999999999999999999
Q ss_pred cchhhhhhhhcCCCCCCCcc--------CCCCccEEEeCCCCC-CCCCCCcEEEEEecccccccchhcccccCCCccCCC
Q 013675 313 GGFVLPFAKKLGYPIPPFDF--------SVQGVTSISVDVHKY-GLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSP 383 (438)
Q Consensus 313 gg~~~pf~~~~g~~~p~~~~--------~~~gvdsis~s~hK~-~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~ 383 (438)
+++... +. ++... ...+.+++..+++|. +..+.++|+++.+ +++............
T Consensus 211 ~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~------- 275 (396)
T 3jtx_A 211 SEIYFD-----GN--KPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGD-AELLKNFLLYRTYHG------- 275 (396)
T ss_dssp TTCCST-----TC--CCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEEC-HHHHHHHHHHHHHHT-------
T ss_pred cccccC-----CC--CCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeC-HHHHHHHHHHHhhcc-------
Confidence 865431 10 01111 024678889999995 4455668987654 444322111100000
Q ss_pred CccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 384 TVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 384 ~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
++-+....+++.+++. ..+.+++..++..++.+++.+.|++.
T Consensus 276 ---~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~ 317 (396)
T 3jtx_A 276 ---SAMSIPVQRASIAAWD--DEQHVIDNRRLYQEKFERVIPILQQV 317 (396)
T ss_dssp ---CCCCHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ---cCCCHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0111111223333333 24567788888889999999999874
No 141
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.81 E-value=4e-19 Score=178.19 Aligned_cols=244 Identities=13% Similarity=0.071 Sum_probs=169.9
Q ss_pred cccchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a 242 (438)
+....+..++++++.+++.+.+|.+.+. ..++ ++|+||++|+..+++++. .+| ++|+++.+.|..+...
T Consensus 57 y~~~~g~~~l~~~la~~~~~~~~~~~~~-~~~i--~~~~g~~~a~~~~~~~~~-----~~g---d~vl~~~p~~~~~~~~ 125 (410)
T 3e2y_A 57 YTRGFGHPALVKALSCLYGKIYQRQIDP-NEEI--LVAVGAYGSLFNSIQGLV-----DPG---DEVIIMVPFYDCYEPM 125 (410)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHTSCCCT-TTSE--EEESHHHHHHHHHHHHHC-----CTT---CEEEEEESCCTTHHHH
T ss_pred CCCCCChHHHHHHHHHHHHHHhCCCCCC-CCCE--EEeCCcHHHHHHHHHHhc-----CCC---CEEEEeCCCchhhHHH
Confidence 3333456678888888888888864311 0126 899999999999999875 366 8999999999999999
Q ss_pred HhhcCcEEEEeeCC-----------CCCccCHHHHHHhhccCcEEEEEecCCCCCccc---cCHHHHHHHHHHcCCeEEE
Q 013675 243 AQYFNIKLWRVPVD-----------KEFRADVKAIKKYINRNTVLIVGSAPGFPHGII---DPIQELGELALSHGTCLHV 308 (438)
Q Consensus 243 ~~~~Gi~v~~v~~~-----------~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~i---ddi~~I~~la~~~~i~lhV 308 (438)
++..|.+++.+|++ .++.+|++++++++++++++|++++|+||+|.+ +++++|+++|++||+++++
T Consensus 126 ~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 205 (410)
T 3e2y_A 126 VRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCIS 205 (410)
T ss_dssp HHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEE
Confidence 99999999999986 356789999999999999999999999999999 5699999999999999999
Q ss_pred eccccchhhhhhhhcCCCCCCCc-c-CCCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCc
Q 013675 309 DLCLGGFVLPFAKKLGYPIPPFD-F-SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTV 385 (438)
Q Consensus 309 D~a~gg~~~pf~~~~g~~~p~~~-~-~~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~ 385 (438)
|++|+++... |...+++. . ...+.+++..+++|.+. .+.++|+++.+++ +.......... ..
T Consensus 206 De~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~---~~------ 270 (410)
T 3e2y_A 206 DEVYEWLVYT-----GHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAH-LIKHLQTVQQN---SF------ 270 (410)
T ss_dssp ECTTTTCBCT-----TCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHH-HHHHHHHHHHT---TT------
T ss_pred EhhhhhcccC-----CCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHH-HHHHHHHHHHh---hc------
Confidence 9999866531 11000111 1 11234678888899943 3455888776543 32221110000 00
Q ss_pred cCCCCCchHHHHHHHHHH------HcHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 386 AGSRPGGLIAGAWAALMS------LGQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 386 ~gsr~~~~ia~~~aal~~------~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
.+-+....+++..++.. ...+.+++..++..++++++.+.|+++ |++
T Consensus 271 -~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 323 (410)
T 3e2y_A 271 -YTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLK 323 (410)
T ss_dssp -CCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCE
T ss_pred -cCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 00111112233333331 124567888888999999999999887 554
No 142
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.81 E-value=4.2e-19 Score=177.03 Aligned_cols=228 Identities=16% Similarity=0.090 Sum_probs=158.6
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEE
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~ 252 (438)
..++++.+++++|.+ + + ++|+|||+|+.+++++++- ++| ++|+++.++|+++..+++..|++++.
T Consensus 41 ~~~l~~~la~~~~~~--~----~--~~~~~gt~al~~~~~~~~~----~~g---d~Vl~~~~~~~~~~~~~~~~g~~~~~ 105 (393)
T 1mdo_A 41 NQELEAAFCRLTGNQ--Y----A--VAVSSATAGMHIALMALGI----GEG---DEVITPSMTWVSTLNMIVLLGANPVM 105 (393)
T ss_dssp HHHHHHHHHHHHCCS--E----E--EEESCHHHHHHHHHHHTTC----CTT---CEEEEESSSCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhCCC--c----E--EEecChHHHHHHHHHHcCC----CCC---CEEEeCCCccHhHHHHHHHCCCEEEE
Confidence 345556788888875 2 4 8999999999999998721 256 89999999999999999999999999
Q ss_pred eeCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCc
Q 013675 253 VPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFD 331 (438)
Q Consensus 253 v~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~ 331 (438)
+|+++ ++.+|+++++++++++|++|++++ ++|.+.|+++|.++|+++|+++++|++|+.+..+ . +
T Consensus 106 v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~--~--~------- 171 (393)
T 1mdo_A 106 VDVDRDTLMVTPEHIEAAITPQTKAIIPVH---YAGAPADLDAIYALGERYGIPVIEDAAHATGTSY--K--G------- 171 (393)
T ss_dssp ECBCTTTCCBCHHHHHHHCCTTEEEECCBC---GGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEE--T--T-------
T ss_pred EeccCCcCCCCHHHHHHhcCCCceEEEEeC---CCCCcCCHHHHHHHHHHcCCeEEEECccccCCeE--C--C-------
Confidence 99987 478999999999998999888764 6999999999999999999999999999743321 0 1
Q ss_pred cCCCC-ccEEEeCCC--CCCCCCCCcEEEEEecccccccchhccc-ccCCCccC------CCC----ccCCCCCchHHHH
Q 013675 332 FSVQG-VTSISVDVH--KYGLAPKGTSVVLYRNREIRKHQFVAVT-EWSGGLYV------SPT----VAGSRPGGLIAGA 397 (438)
Q Consensus 332 ~~~~g-vdsis~s~h--K~~~~p~g~g~l~~r~~~~~~~~~~~~~-~~~g~~~~------~~~----~~gsr~~~~ia~~ 397 (438)
...+ .|+++.|+| |++.+ ...|+++.+++++.+....... .+...... ... ..|.........+
T Consensus 172 -~~~~~~d~~~~S~~k~K~l~~-~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 249 (393)
T 1mdo_A 172 -RHIGARGTAIFSFHAIKNITC-AEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNA 249 (393)
T ss_dssp -EETTSSSEEEEECCTTSSSCS-SSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHH
T ss_pred -eecCCCCeEEEeCCCCCcccc-ccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHH
Confidence 1123 799999999 99644 4567777765554332111100 00000000 000 1121111111122
Q ss_pred HHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 398 WAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 398 ~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
.+++ ...+++++..++..++++++.+.|++++ ++
T Consensus 250 a~~~--~~l~~~~~~~~~~~~~~~~l~~~L~~~~-~~ 283 (393)
T 1mdo_A 250 AIAL--AQLQKLDALNARRAAIAAQYHQAMADLP-FQ 283 (393)
T ss_dssp HHHH--HHHHTHHHHHHHHHHHHHHHHHHHHTSS-CE
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCC-cc
Confidence 2222 2335677888888899999999998875 54
No 143
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.81 E-value=2.1e-19 Score=180.22 Aligned_cols=209 Identities=16% Similarity=0.155 Sum_probs=152.6
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH----HHhhcCc
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK----AAQYFNI 248 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~----a~~~~Gi 248 (438)
..++++.+++++|.+ .. +++++||+|+.++++ +. ++| ++|+++.+.|.+... .++..|+
T Consensus 57 ~~~lr~~la~~~g~~-~~-------i~~~sGt~a~~~al~-~~-----~~g---d~Vi~~~~~y~~~~~~~~~~~~~~G~ 119 (393)
T 1n8p_A 57 RENLERAVAALENAQ-YG-------LAFSSGSATTATILQ-SL-----PQG---SHAVSIGDVYGGTHRYFTKVANAHGV 119 (393)
T ss_dssp HHHHHHHHHHHTTCS-EE-------EEESCHHHHHHHHHH-TS-----CSS---CEEEEESSCCHHHHHHHHHTSTTTCS
T ss_pred HHHHHHHHHHHhCCC-cE-------EEECChHHHHHHHHH-Hc-----CCC---CEEEEeCCCchHHHHHHHHHHHHcCc
Confidence 456677899999986 32 566667999999998 54 367 899999999986544 4566799
Q ss_pred EEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHc----CCeEEEeccccchhhhhhhhcC
Q 013675 249 KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSH----GTCLHVDLCLGGFVLPFAKKLG 324 (438)
Q Consensus 249 ~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~----~i~lhVD~a~gg~~~pf~~~~g 324 (438)
+++.+|++ | ++++++|+++|++|++++|+||+|.+.|+++|+++|+++ |+++|+|++|+.+...
T Consensus 120 ~v~~v~~~-----d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~------ 187 (393)
T 1n8p_A 120 ETSFTNDL-----L-NDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS------ 187 (393)
T ss_dssp CCEEESSH-----H-HHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC------
T ss_pred EEEEeCCC-----h-HHHHHhcccCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC------
Confidence 99999875 7 999999999999999999999999999999999999999 9999999999876541
Q ss_pred CCCCCCccCCCCccEEEeCCCCCCCCCCC--c-EEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHH
Q 013675 325 YPIPPFDFSVQGVTSISVDVHKYGLAPKG--T-SVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAAL 401 (438)
Q Consensus 325 ~~~p~~~~~~~gvdsis~s~hK~~~~p~g--~-g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal 401 (438)
.+++ .|+|+++.++||+ ++|+| . |+++.+++++.......... .|.+.... .+++++
T Consensus 188 ---~~~~---~~~di~~~S~sK~-~g~~G~rigG~~~~~~~~~~~~l~~~~~~-----------~g~~~~~~--~~~~~~ 247 (393)
T 1n8p_A 188 ---NPLN---FGADIVVHSATKY-INGHSDVVLGVLATNNKPLYERLQFLQNA-----------IGAIPSPF--DAWLTH 247 (393)
T ss_dssp ---CGGG---GTCSEEEEETTTT-TTCSSCCCCEEEEESCHHHHHHHHHHHHH-----------HCCCCCHH--HHHHHH
T ss_pred ---CHHH---cCCeEEEEECccc-ccCCCCceeEEEEeCCHHHHHHHHHHHHh-----------cCCCCCHH--HHHHHH
Confidence 0122 3689999999999 67777 6 87776655443322111111 12222222 444444
Q ss_pred HHHcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 013675 402 MSLGQEGYLENTKAIMEVSESIQKGLVLFPM 432 (438)
Q Consensus 402 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g 432 (438)
..+ +.+....++..++++.+.+.|++.|.
T Consensus 248 ~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~ 276 (393)
T 1n8p_A 248 RGL--KTLHLRVRQAALSANKIAEFLAADKE 276 (393)
T ss_dssp HHH--TTHHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred hcc--chHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 333 34556667777788888888877654
No 144
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.81 E-value=2.8e-19 Score=181.23 Aligned_cols=220 Identities=16% Similarity=0.118 Sum_probs=156.7
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecC-CCcCcHHHHHh-------
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPV-SAHSAYDKAAQ------- 244 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~-~~h~s~~~a~~------- 244 (438)
.+++.+++++++|.+... .-+++++||+|+..++.++. ++| |+|+++. +.|.++...+.
T Consensus 67 ~~~l~~~la~~~g~~~~~-----~~i~~~sGt~Ai~~al~al~-----~~G---d~Vl~~~~~~y~~~~~~~~l~g~~~~ 133 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGL-----VRPQIISGTHAISTALFGIL-----RPG---DELLYITGKPYDTLEEIVGVRGKGVG 133 (431)
T ss_dssp HHHHHHHHHHHTTCSEEC-----CBTTSCSHHHHHHHHHHTTC-----CTT---CEEEECSSSCCTTHHHHTTSSSCSSS
T ss_pred HHHHHHHHHHHhCCCccc-----ccceeeCHHHHHHHHHHHhC-----CCC---CEEEEeCCCCchhHHHHHhhcccccc
Confidence 556777899999997643 11224588999999998765 367 8999998 89999886654
Q ss_pred ---hcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEec----CCCCCccccCHHHHHHHHHH--cCCeEEEeccccch
Q 013675 245 ---YFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSA----PGFPHGIIDPIQELGELALS--HGTCLHVDLCLGGF 315 (438)
Q Consensus 245 ---~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~----~~~~tG~iddi~~I~~la~~--~~i~lhVD~a~gg~ 315 (438)
.+|++++.+|.++++.+|+++++++++++|++|++++ |++++|.+.|+++|+++|++ +|+++++|++|+.+
T Consensus 134 ~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~ 213 (431)
T 3ht4_A 134 SFKEYNIGYNAVPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEF 213 (431)
T ss_dssp CSGGGTCEEEECCBCTTSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTT
T ss_pred hHHHcCCEEEEeCCCCCCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhh
Confidence 4799999999998999999999999999999999997 56666677889999999999 99999999999876
Q ss_pred hhhhhhhcCCCCCCCccCCCCccEEEeCCCCCC---CCCCCcEEEEEecccccccchh-cccccCCCccCCCCccCCCCC
Q 013675 316 VLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYG---LAPKGTSVVLYRNREIRKHQFV-AVTEWSGGLYVSPTVAGSRPG 391 (438)
Q Consensus 316 ~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~---~~p~g~g~l~~r~~~~~~~~~~-~~~~~~g~~~~~~~~~gsr~~ 391 (438)
... .+....|+|+++.++||++ ++|.| |+++.+ +++.+.... ......+. ..|....
T Consensus 214 ~~~-----------~~~~~~g~Di~~~S~sK~lgg~~~~~G-G~v~~~-~~li~~l~~~~~~~~~g~------~~~~~~~ 274 (431)
T 3ht4_A 214 IEE-----------QEPCHVGADLMAGSLIKNPGGGIVKTG-GYIVGK-EQYVEACAYRLTSPGIGA------EAGASLY 274 (431)
T ss_dssp SSS-----------CCGGGTTCSEEEEETTSGGGTTTCSSC-EEEEEC-HHHHHHHHHHHSCTTTTT------SCSCCCS
T ss_pred ccC-----------CCccccCCeEEEcCccccCCCCCCCce-EEEEec-HHHHHHHHHHhccCCccc------ccCccHH
Confidence 531 1122347899999999994 34677 887765 443322111 11110110 0111111
Q ss_pred chHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 392 GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 392 ~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
. ++++++ +......+.++..++++++++.|+++
T Consensus 275 ~----~~~~~~--~l~~~~~~~~~~~~~a~~l~~~L~~~ 307 (431)
T 3ht4_A 275 S----LQEMYQ--GFFLAPHVAGQALKGAIFTAAFLEKL 307 (431)
T ss_dssp C----SHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H----HHHHHh--HhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 1 222332 23445677788888999999999876
No 145
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.81 E-value=7.6e-19 Score=179.72 Aligned_cols=160 Identities=17% Similarity=0.207 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH----HhhcC
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA----AQYFN 247 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a----~~~~G 247 (438)
..+++++++++++|.+ + + +++++|++|+.+++. .. ++| ++|+++.+.|.++... ++..|
T Consensus 134 ~~~~l~~~la~~~g~~--~----~--i~~~sGt~al~~~l~-~~-----~~G---d~Vi~~~~~y~~~~~~~~~~~~~~G 196 (464)
T 1ibj_A 134 TRDALESLLAKLDKAD--R----A--FCFTSGMAALSAVTH-LI-----KNG---EEIVAGDDVYGGSDRLLSQVVPRSG 196 (464)
T ss_dssp HHHHHHHHHHHHHTCS--E----E--EEESSHHHHHHHHHT-TS-----CTT---CEEEEESSCCHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHhCCC--e----E--EEECCHHHHHHHHHH-Hh-----CCC---CEEEEECCCchhHHHHHHHHHHHcC
Confidence 4667888999999975 2 3 788888999887765 22 366 8999999999998754 56779
Q ss_pred cEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCC
Q 013675 248 IKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPI 327 (438)
Q Consensus 248 i~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~ 327 (438)
++++.+|.+ |+++++++|+++|++|++++|+||+|.+.|+++|+++|++||+++++|++|+.+.. .
T Consensus 197 ~~v~~v~~~-----d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~---------~ 262 (464)
T 1ibj_A 197 VVVKRVNTT-----KLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVL---------S 262 (464)
T ss_dssp CEEEEECTT-----SHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTT---------C
T ss_pred CEEEEeCCC-----CHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCccccc---------C
Confidence 999999875 89999999999999999999999999999999999999999999999999864322 1
Q ss_pred CCCccCCCCccEEEeCCCCCCCCCCCc--EEEEEeccccc
Q 013675 328 PPFDFSVQGVTSISVDVHKYGLAPKGT--SVVLYRNREIR 365 (438)
Q Consensus 328 p~~~~~~~gvdsis~s~hK~~~~p~g~--g~l~~r~~~~~ 365 (438)
.+++ .++|+++.++||++++|.|+ |+++.+++++.
T Consensus 263 ~~~~---~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~ 299 (464)
T 1ibj_A 263 RPLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLA 299 (464)
T ss_dssp CGGG---TTCSEEEEETTTTTTCSSCCCCEEEEECSHHHH
T ss_pred Chhh---cCCEEEEECCcccccCCCCCcEEEEEEChHHHH
Confidence 1233 47899999999997787775 98888765543
No 146
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.81 E-value=4.5e-19 Score=179.14 Aligned_cols=216 Identities=16% Similarity=0.070 Sum_probs=156.3
Q ss_pred HHHHHHHHHhCCCCCCCCCccceeE---cCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecC-CCcCcHH----------
Q 013675 175 EVIAMTAALLGNKEKASGGQVCGNM---TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPV-SAHSAYD---------- 240 (438)
Q Consensus 175 ~~~~~~a~l~g~~~~~~~~~v~g~~---t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~-~~h~s~~---------- 240 (438)
++.+.+++++|.+.. ++ +++||+|+..++.++. ++| |+|+++. +.|....
T Consensus 78 ~Le~~lA~l~g~e~a--------lv~p~~~sGt~A~~~al~all-----~pG---D~Vl~~~~~~y~~~~~~~g~~~~~~ 141 (427)
T 3hvy_A 78 SLDRVYANIFNTESA--------FVRPHFVNGTHAIGAALFGNL-----RPN---DTMMSICGMPYDTLHDIIGMDDSKK 141 (427)
T ss_dssp HHHHHHHHHHTCSEE--------EEETTCCSHHHHHHHHHHHTC-----CTT---CEEEECSSSCCGGGHHHHTCCTTCC
T ss_pred HHHHHHHHHhCCCce--------EEeCCCCcHHHHHHHHHHHhc-----CCC---CEEEEeCCCCchhHHHHhccccchh
Confidence 344578999998643 45 8999999999998875 377 9999998 8887665
Q ss_pred -HHHhhcCcEEEEeeCCCCCccCHHHHHHhhc--cCcEEEEEec----CCCCCccccCHHHHHHHHHH--cCCeEEEecc
Q 013675 241 -KAAQYFNIKLWRVPVDKEFRADVKAIKKYIN--RNTVLIVGSA----PGFPHGIIDPIQELGELALS--HGTCLHVDLC 311 (438)
Q Consensus 241 -~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~--~~t~~vv~~~----~~~~tG~iddi~~I~~la~~--~~i~lhVD~a 311 (438)
..++.+|++++.+|. +++.+|+++++++++ ++|++|++++ |+||+|.+.|+++|+++|++ +|++++||+|
T Consensus 142 ~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a 220 (427)
T 3hvy_A 142 VGSLREYGVKYKMVDL-KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNC 220 (427)
T ss_dssp SCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred hhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 445667999999998 788999999999999 7899999999 99999999999999999999 8999999999
Q ss_pred ccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCC--CCcEEEEEecccccccchh-cccccCCCccCCCCccCC
Q 013675 312 LGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAP--KGTSVVLYRNREIRKHQFV-AVTEWSGGLYVSPTVAGS 388 (438)
Q Consensus 312 ~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p--~g~g~l~~r~~~~~~~~~~-~~~~~~g~~~~~~~~~gs 388 (438)
|+.+... .+....|+|+++.++||++.++ ...|+++.+ +++.+.... ......|. .. |.
T Consensus 221 ~~~~~~~-----------~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~-~~li~~l~~~~~~~~~g~-~~-----~~ 282 (427)
T 3hvy_A 221 YGEFVEE-----------KEPTDVGADIIAGSLIKNIGGGIATTGGYIAGK-EEYVTQATFRVTVPGIGG-EC-----GS 282 (427)
T ss_dssp TCTTTSS-----------SCGGGGTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGG-GC-----CC
T ss_pred ccccccC-----------CCCcccCCeEEEECCcccccccccceEEEEEEC-HHHHHHHHHHhhcCCccc-cc-----CC
Confidence 9765421 1112347899999999995442 233776665 444332211 11110110 00 10
Q ss_pred CCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013675 389 RPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFP 431 (438)
Q Consensus 389 r~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~ 431 (438)
... .+|.+++ |..-...+.++..+++.++++.|++++
T Consensus 283 ~~~----~a~~~~~--gl~~~~~r~~~~~~~a~~la~~L~~~g 319 (427)
T 3hvy_A 283 TFG----VMRSLYE--GLFMAPHVTIEAVKGAVFCARIMELAG 319 (427)
T ss_dssp CTT----CHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHH----HHHHHHH--hHhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 011 1344443 334456788889999999999999874
No 147
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.81 E-value=5.8e-19 Score=174.93 Aligned_cols=247 Identities=13% Similarity=0.046 Sum_probs=170.7
Q ss_pred HHHHHHHhhccCCCCcccchhHHHHHHHHHHHHHHHhCC--CCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhc--C
Q 013675 148 INEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKR--G 223 (438)
Q Consensus 148 ~~~~~~~~~~~n~~~~~~~~~~~~~e~~~~~~~a~l~g~--~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~--G 223 (438)
+.+++.... .....|....+..++++++.+++.+.+|. ++++ + ++|+|+|+++.++++++.. + |
T Consensus 41 v~~a~~~~~-~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~----i--~~t~g~~~al~~~~~~~~~-----~~~g 108 (376)
T 3ezs_A 41 IQDALKNHT-HSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENE----L--ISTLGSREVLFNFPSFVLF-----DYQN 108 (376)
T ss_dssp HHHHHHTTG-GGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGG----E--EEESSSHHHHHHHHHHHTT-----TCSS
T ss_pred HHHHHHHhh-hhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHH----E--EECcCcHHHHHHHHHHHcC-----CCCC
Confidence 344444433 22233333445678888999999999998 4444 6 8999999999999998763 5 6
Q ss_pred CCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHH
Q 013675 224 ITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELAL 300 (438)
Q Consensus 224 ~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~ 300 (438)
++|+++.++|.++...++..|.+++.+|++++..+++ ++++++++++++|++++|+||||.+.| +++|+++|+
T Consensus 109 ---d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~ 184 (376)
T 3ezs_A 109 ---PTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLAL 184 (376)
T ss_dssp ---CEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHHHHCSEEEECSSCTTTCCCCCHHHHHHHHHHHH
T ss_pred ---CEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhccCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHH
Confidence 8999999999999999999999999999987555666 788888888999999999999999977 667788899
Q ss_pred HcCCeEEEeccccchhhhhhhhcCCCCCCCcc------CCCCccEEEeCCCCCC-CCCCCcEEEEEecccccccchhccc
Q 013675 301 SHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDF------SVQGVTSISVDVHKYG-LAPKGTSVVLYRNREIRKHQFVAVT 373 (438)
Q Consensus 301 ~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~------~~~gvdsis~s~hK~~-~~p~g~g~l~~r~~~~~~~~~~~~~ 373 (438)
+||+++++|++|+++... +...+.... ...+.+++..+++|.+ ..+.++|+++.+ +++.........
T Consensus 185 ~~~~~li~De~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~ 258 (376)
T 3ezs_A 185 KHDFILINDECYSEIYEN-----TPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGD-SRLLEKYKAFRA 258 (376)
T ss_dssp HHTCEEEEECTTTTCBSS-----SCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEEC-HHHHHHHHHHHT
T ss_pred HcCcEEEEEccchhhccC-----CCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeC-HHHHHHHHHHHh
Confidence 999999999999876531 100100111 0356788999999995 244568887654 443322111100
Q ss_pred ccCCCccCCCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhh
Q 013675 374 EWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLV 428 (438)
Q Consensus 374 ~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~ 428 (438)
.. ..+-+....+++.+++.. .+.+++..++..++.+++.+.|+
T Consensus 259 ~~----------~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~ 301 (376)
T 3ezs_A 259 YL----------GYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK 301 (376)
T ss_dssp TT----------CCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST
T ss_pred hh----------cCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc
Confidence 00 001111112233334432 34567888888889999998886
No 148
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.81 E-value=8.4e-19 Score=176.14 Aligned_cols=213 Identities=17% Similarity=0.113 Sum_probs=154.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHH-----hhcCc
Q 013675 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA-----QYFNI 248 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~-----~~~Gi 248 (438)
.++.+.++++.|.+. . +++++|++|+..+ .++. ++| ++|+++.+.|.+....+ ...|+
T Consensus 70 ~~l~~~la~l~g~~~------~--~~~~sG~~Ai~~~-~~l~-----~~g---d~Vi~~~~~y~~~~~~~~~~~~~~~g~ 132 (400)
T 3nmy_A 70 FAYERCVAALEGGTR------A--FAFASGMAATSTV-MELL-----DAG---SHVVAMDDLYGGTFRLFERVRRRTAGL 132 (400)
T ss_dssp HHHHHHHHHHHTCSE------E--EEESSHHHHHHHH-HTTS-----CTT---CEEEEESSCCHHHHHHHHHTHHHHHCC
T ss_pred HHHHHHHHHHhCCCC------E--EEecCHHHHHHHH-HHHc-----CCC---CEEEEeCCCchHHHHHHHHhhHhhcCe
Confidence 345556888888762 2 6778889999874 3332 366 89999999998655553 33599
Q ss_pred EEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCC
Q 013675 249 KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIP 328 (438)
Q Consensus 249 ~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p 328 (438)
+++.++.+ |+++++++|+++|++|++++|+||+|.+.|+++|+++|++||+++++|++++.+.. . .
T Consensus 133 ~~~~v~~~-----d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~---~------~ 198 (400)
T 3nmy_A 133 DFSFVDLT-----DPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPML---Q------R 198 (400)
T ss_dssp EEEEECTT-----SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHH---C------C
T ss_pred EEEEECCC-----CHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc---C------C
Confidence 99999875 89999999999999999999999999999999999999999999999999975432 1 1
Q ss_pred CCccCCCCccEEEeCCCCCCCCCC-C-cE-EEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHc
Q 013675 329 PFDFSVQGVTSISVDVHKYGLAPK-G-TS-VVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG 405 (438)
Q Consensus 329 ~~~~~~~gvdsis~s~hK~~~~p~-g-~g-~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g 405 (438)
+++ .|+|+++.+++|++.+|. . .| +++.+++++.+........ . |.... ...+|++++.
T Consensus 199 ~~~---~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~-~----------g~~~~--~~~a~~~l~~-- 260 (400)
T 3nmy_A 199 PLS---LGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNS-I----------GGVQG--PFDSFLALRG-- 260 (400)
T ss_dssp GGG---GTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHH-H----------CCBCC--HHHHHHHHHH--
T ss_pred hhh---cCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHh-c----------CCCCC--HHHHHHHHHh--
Confidence 232 378999999999976662 2 35 4555555443322111110 0 11111 2356666643
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 406 QEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 406 ~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+.+..+.++..++++++.+.|++.|.++-
T Consensus 261 l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~ 290 (400)
T 3nmy_A 261 LKTLPLRMRAHCENALALAQWLETHPAIEK 290 (400)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHcCCCEeE
Confidence 456778888899999999999998887653
No 149
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.80 E-value=1.1e-18 Score=175.19 Aligned_cols=230 Identities=16% Similarity=0.190 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHH---HHHhhc
Q 013675 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD---KAAQYF 246 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~---~a~~~~ 246 (438)
..+++.+++++++++|.++.. +++++||+|+..+++++. ++| ++|+++.+.|.++. ......
T Consensus 75 ~~~~~~~~~~la~~~~~~~~~-------v~~~sGs~a~~~a~~~~~-----~~g---d~v~~~~~~~~~~~~~~~~~~~~ 139 (420)
T 3gbx_A 75 DVVEQLAIDRAKELFGADYAN-------VQPHSGSQANFAVYTALL-----QPG---DTVLGMNLAQGGHLTHGSPVNFS 139 (420)
T ss_dssp HHHHHHHHHHHHHHHTCSEEE-------CCCSSHHHHHHHHHHHHC-----CTT---CEEEEEEEC------------CH
T ss_pred HHHHHHHHHHHHHHhCCCCce-------eEecCcHHHHHHHHHHhc-----CCC---CEEEecchhhcceeccchhhhhc
Confidence 456777778999999997654 445566999999988875 367 89999999998743 222223
Q ss_pred C--cEEEEeeCCCCCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhc
Q 013675 247 N--IKLWRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (438)
Q Consensus 247 G--i~v~~v~~~~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~ 323 (438)
| ...+.+++++++.+|+++|++++++ ++++|++++|+++ ...|+++|+++|++||+++++|++++.+... .
T Consensus 140 g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~l~~l~~~~~~~li~De~~~~~~~~----~ 213 (420)
T 3gbx_A 140 GKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYS--GVVDWAKMREIADSIGAYLFVDMAHVAGLIA----A 213 (420)
T ss_dssp HHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCC--SCCCHHHHHHHHHHTTCEEEEECTTTHHHHH----T
T ss_pred ccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccC--CccCHHHHHHHHHHcCCEEEEECCcchhcee----c
Confidence 3 4566667777889999999999987 5899999888875 5889999999999999999999997644331 1
Q ss_pred CCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecc--cccccchhcccccCCCccCCCCccCCCCCchHHHHHHHH
Q 013675 324 GYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNR--EIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAAL 401 (438)
Q Consensus 324 g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~--~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal 401 (438)
+. .......+|+++.++||++.+|.| |+++.++. ++......... +...++.+...++++.+++
T Consensus 214 ~~----~~~~~~~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~a~ 279 (420)
T 3gbx_A 214 GV----YPNPVPHAHVVTTTTHKTLAGPRG-GLILAKGGDEELYKKLNSAVF---------PSAQGGPLMHVIAGKAVAL 279 (420)
T ss_dssp TS----SCCSTTTSSEEEEESSGGGCSCSC-EEEEESSCCHHHHHHHHHHHC-------------CCCCHHHHHHHHHHH
T ss_pred cc----CCcccccCCEEEeecccCCCCCCc-eEEEEcCCcHHHHHHhhhhcC---------CCCCCCcchhHHHHHHHHH
Confidence 11 111122489999999999667776 87776651 33322111000 0111222233345666666
Q ss_pred HHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 402 MSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 402 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.....+++++..++..++++++.+.|++. ++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 312 (420)
T 3gbx_A 280 KEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKV 312 (420)
T ss_dssp HHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCee
Confidence 55556778899999999999999999873 5543
No 150
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.80 E-value=2.3e-19 Score=179.45 Aligned_cols=227 Identities=15% Similarity=0.153 Sum_probs=158.0
Q ss_pred HHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEee
Q 013675 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (438)
Q Consensus 175 ~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~ 254 (438)
++++.+++++|.++++ + ++|+|+++++.++++++. .+| ++|+++.++|.++...++..|.+++.+|
T Consensus 78 ~l~~~la~~~g~~~~~----v--~~~~g~~~al~~~~~~~~-----~~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~~~ 143 (397)
T 2zyj_A 78 PLRAFVAEWIGVRPEE----V--LITTGSQQALDLVGKVFL-----DEG---SPVLLEAPSYMGAIQAFRLQGPRFLTVP 143 (397)
T ss_dssp HHHHHHHHHHTSCGGG----E--EEESHHHHHHHHHHHHHC-----CTT---CEEEEEESCCHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHhCCChhh----E--EEeccHHHHHHHHHHHhC-----CCC---CEEEEeCCCcHHHHHHHHHcCCEEEecC
Confidence 3444566667876654 6 899999999999999875 366 8999999999999999999999999999
Q ss_pred CCCCCccCHHHHHHhhcc-CcEEE-EEecCCCCCccccCHH---HHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCC
Q 013675 255 VDKEFRADVKAIKKYINR-NTVLI-VGSAPGFPHGIIDPIQ---ELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPP 329 (438)
Q Consensus 255 ~~~~~~~d~~~Le~~I~~-~t~~v-v~~~~~~~tG~iddi~---~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~ 329 (438)
.++++ +|+++|++++++ ++++| ++++|+||||.+.|.+ +|+++|++||+++++|++|+++... |...++
T Consensus 144 ~~~~~-~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-----g~~~~~ 217 (397)
T 2zyj_A 144 AGEEG-PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFG-----EARLPS 217 (397)
T ss_dssp EETTE-ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCS-----SCCCCC
T ss_pred cCCCC-CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCC-----CCCCCc
Confidence 87655 999999999987 78887 5799999999998754 8999999999999999999875431 110001
Q ss_pred C-ccCCC---CccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHH-
Q 013675 330 F-DFSVQ---GVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL- 404 (438)
Q Consensus 330 ~-~~~~~---gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~- 404 (438)
+ ..... +.+++..++||++..+.++|+++.+ +++.+........+. .+. + ..++.++...+
T Consensus 218 ~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~---------~~~-~---~~~~~a~~~~l~ 283 (397)
T 2zyj_A 218 LFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAH-PEALQKLVQAKQGAD---------LHT-P---MLNQMLVHELLK 283 (397)
T ss_dssp HHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECC-HHHHHHHHHHHHHHH---------SSC-C---HHHHHHHHHHHT
T ss_pred hhhhCcccCCCeEEEEecccccccccceeEEEecC-HHHHHHHHHHHHhhc---------CCC-C---HHHHHHHHHHHH
Confidence 1 11111 2347888999996522457988776 443322111111110 001 1 11333333333
Q ss_pred -cH-HHHHHHHHHHHHHHHHHHHHhhc-CC-Cccc
Q 013675 405 -GQ-EGYLENTKAIMEVSESIQKGLVL-FP-MFLP 435 (438)
Q Consensus 405 -g~-~g~~~~~~~~~~~a~~l~~~L~~-~~-g~~~ 435 (438)
+. +.+++..++..++++++.+.|++ +| ++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~ 318 (397)
T 2zyj_A 284 EGFSERLERVRRVYREKAQAMLHALDREVPKEVRY 318 (397)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEE
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEE
Confidence 22 45677788888899999999986 56 4653
No 151
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.80 E-value=5.3e-19 Score=178.46 Aligned_cols=243 Identities=14% Similarity=0.094 Sum_probs=160.8
Q ss_pred CcccchhHHHHHHHHHHHHHHHhCC--CCC--CCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcC
Q 013675 162 HLDIFQSVARFEAEVIAMTAALLGN--KEK--ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (438)
Q Consensus 162 ~~~~~~~~~~~e~~~~~~~a~l~g~--~~~--~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~ 237 (438)
.|....+..++.+++.+++....+. +++ + + ++|+|||+|+.++++.... ..+| ++|+++.++|.
T Consensus 87 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~----i--~~t~G~t~al~~~~~~~~~---~~~g---d~Vlv~~p~~~ 154 (420)
T 4f4e_A 87 GYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVV----T--AQALGGTGALKIGADFLRT---LNPK---AKVAISDPSWE 154 (420)
T ss_dssp CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEE----E--EEEEHHHHHHHHHHHHHHH---HCTT---CCEEEEESCCH
T ss_pred CCCCCCCcHHHHHHHHHHhcCCCccccccCceE----E--EECCccHHHHHHHHHHHHH---hCCC---CEEEEeCCCcH
Confidence 3444556666777666666443331 233 3 5 8999999999999654321 1367 89999999999
Q ss_pred cHHHHHhhcCcEEEEeeC--CCCCccCHHHHHHhhc---cCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEe
Q 013675 238 AYDKAAQYFNIKLWRVPV--DKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVD 309 (438)
Q Consensus 238 s~~~a~~~~Gi~v~~v~~--~~~~~~d~~~Le~~I~---~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD 309 (438)
++...++..|.+++.+|+ ++++.+|+++++++++ ++++++++++|+||||.+.+ +++|+++|++||+++++|
T Consensus 155 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 234 (420)
T 4f4e_A 155 NHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLD 234 (420)
T ss_dssp HHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred hHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Confidence 999999999999999998 3478999999999998 67899999999999999955 678999999999999999
Q ss_pred ccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCC--cEEEEE--eccccccc---chhc--ccccCCCcc
Q 013675 310 LCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLY--RNREIRKH---QFVA--VTEWSGGLY 380 (438)
Q Consensus 310 ~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g--~g~l~~--r~~~~~~~---~~~~--~~~~~g~~~ 380 (438)
++|+++....-+.. ..+..+. ...+.+++..+++|. ++++| +|+++. .+++.... .... ...|.+
T Consensus 235 e~y~~~~~~~~~~~-~~~~~~~-~~~~~~i~~~S~SK~-~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 308 (420)
T 4f4e_A 235 IAYQGFGESIEADA-AAVRLFA-AANLNVFVSSSFSKS-FSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSN--- 308 (420)
T ss_dssp ESCTTSSSCTTGGG-HHHHHHH-HTTCCEEEEEECTTT-TTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSS---
T ss_pred cccccccCCcchhh-HHHHHHH-hcCCCEEEEEeCCcc-CcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCC---
Confidence 99987653100000 0000010 123457888899999 56555 888764 23332221 1100 011110
Q ss_pred CCCCccCCCCCchHHHHHHHHHHH-----cHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 381 VSPTVAGSRPGGLIAGAWAALMSL-----GQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 381 ~~~~~~gsr~~~~ia~~~aal~~~-----g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
-+....+++..++..- ..+.+++..++..++++++.+.|+++
T Consensus 309 --------~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 355 (420)
T 4f4e_A 309 --------PPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAA 355 (420)
T ss_dssp --------CCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0111111122222211 13446778888899999999999886
No 152
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.80 E-value=1.9e-18 Score=172.68 Aligned_cols=179 Identities=20% Similarity=0.231 Sum_probs=144.9
Q ss_pred cchhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH
Q 013675 165 IFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (438)
Q Consensus 165 ~~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a 242 (438)
..++..++.+++.+++.+.+|.+ +++ + ++|+|+|+|+.++++++.. +| +++|+++.++|.++...
T Consensus 74 ~~~g~~~lr~~la~~l~~~~g~~~~~~~----i--~~~~g~~~al~~~~~~l~~-----~g--~d~vl~~~p~~~~~~~~ 140 (398)
T 3ele_A 74 SAQGDVETRAAIAEFLNNTHGTHFNADN----L--YMTMGAAASLSICFRALTS-----DA--YDEFITIAPYFPEYKVF 140 (398)
T ss_dssp CTTCCHHHHHHHHHHHHHHHCCCCCGGG----E--EEESSHHHHHHHHHHHHCC-----ST--TCEEEEESSCCTHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHhCCCCChHH----E--EEccCHHHHHHHHHHHHcC-----CC--CCEEEEeCCCchhhHHH
Confidence 34556788889999999998853 443 6 8999999999999998752 33 26899999999999999
Q ss_pred HhhcCcEEEEeeCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHH------cCCeEEEeccc
Q 013675 243 AQYFNIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALS------HGTCLHVDLCL 312 (438)
Q Consensus 243 ~~~~Gi~v~~v~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~------~~i~lhVD~a~ 312 (438)
++..|++++.+|+++ ++.+|+++|++++++++++|++++|+||||.+.| +++|+++|++ ||+++++|++|
T Consensus 141 ~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~ 220 (398)
T 3ele_A 141 VNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPY 220 (398)
T ss_dssp HHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTT
T ss_pred HHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccc
Confidence 999999999999986 6789999999999999999999999999999988 6777789999 99999999999
Q ss_pred cchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCC-CCCCcEEEEEecc
Q 013675 313 GGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGL-APKGTSVVLYRNR 362 (438)
Q Consensus 313 gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~-~p~g~g~l~~r~~ 362 (438)
+.+... |... +......+.+++..+++|++. .+.++|+++.+++
T Consensus 221 ~~~~~~-----~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 265 (398)
T 3ele_A 221 REIVYD-----GIKV-PFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDE 265 (398)
T ss_dssp TTCBCT-----TCCC-CCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTT
T ss_pred cccccC-----CCCc-CChHhhcCCeEEEEehhhcCCCccceeEEEEEcch
Confidence 876531 1112 222234456788999999953 4456899887755
No 153
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.79 E-value=1e-18 Score=172.41 Aligned_cols=219 Identities=16% Similarity=0.124 Sum_probs=158.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEe
Q 013675 174 AEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRV 253 (438)
Q Consensus 174 ~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v 253 (438)
.++++.+++++|.++++ + ++|+|||+|+.++++++. ++| ++|+++.++|.++...++..|++++.+
T Consensus 68 ~~lr~~la~~~g~~~~~----i--~~t~g~~~al~~~~~~l~-----~~g---d~Vl~~~p~~~~~~~~~~~~g~~~~~v 133 (360)
T 3hdo_A 68 QKLREVAGELYGFDPSW----I--IMANGSDEVLNNLIRAFA-----AEG---EEIGYVHPSYSYYGTLAEVQGARVRTF 133 (360)
T ss_dssp HHHHHHHHHHHTCCGGG----E--EEESSHHHHHHHHHHHHC-----CTT---CEEEEESSSCTHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHhCcCcce----E--EEcCCHHHHHHHHHHHHh-----CCC---CEEEEcCCChHHHHHHHHHCCCEEEEe
Confidence 35666788888987665 6 999999999999999875 367 899999999999999999999999999
Q ss_pred eCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCcc-
Q 013675 254 PVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDF- 332 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~- 332 (438)
|+++++.+ ++++++++ ++++++++|+||+|.+.|+++|.++|+++|+++++|++|+++.- . + ....
T Consensus 134 ~~~~~~~~--~~l~~~~~--~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~----~-~----~~~~~ 200 (360)
T 3hdo_A 134 GLTGDFRI--AGFPERYE--GKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAE----S-N----ALELV 200 (360)
T ss_dssp CBCTTSSB--TTCCSSBC--SSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSS----C-C----CTHHH
T ss_pred eCCCCCCH--HHHHhhcC--CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCC----c-c----hhHHh
Confidence 99877666 55555443 56999999999999999999999999999999999999986421 0 1 1111
Q ss_pred CCCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHHHHHH
Q 013675 333 SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLE 411 (438)
Q Consensus 333 ~~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g~~~ 411 (438)
...+.++++.+++|.+. .+.++|+++. ++++.+........| +-+....+++.++++. .+.+++
T Consensus 201 ~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~------------~~~~~~~~a~~~~l~~--~~~~~~ 265 (360)
T 3hdo_A 201 RRHENVVVTRTLSKSYSLAGMRIGLAIA-RPEVIAALDKIRDHY------------NLDRLAQAACVAALRD--QAYLSE 265 (360)
T ss_dssp HHCSSEEEEEESTTTTSCTTSCCEEEEC-CHHHHHHHHHHSCSC------------CSCHHHHHHHHHHHHC--HHHHHH
T ss_pred ccCCCEEEEecchHhhcCCccceeeEee-CHHHHHHHHHhCCCC------------CCCHHHHHHHHHHhcC--HHHHHH
Confidence 12345688889999943 4456788776 444433221111111 1111112233344432 456788
Q ss_pred HHHHHHHHHHHHHHHhhcCCCccc
Q 013675 412 NTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 412 ~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
..++..++++++.+.|+++ ++++
T Consensus 266 ~~~~~~~~~~~l~~~L~~~-~~~~ 288 (360)
T 3hdo_A 266 CCRRIRETREWFTTELRSI-GYDV 288 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred HHHHHHHHHHHHHHHHHHC-CCEE
Confidence 8899999999999999887 5543
No 154
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.79 E-value=2.5e-18 Score=172.05 Aligned_cols=228 Identities=14% Similarity=0.065 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEE
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLW 251 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~ 251 (438)
...++++.+++++|.+ ++ + ++|+| ++++..++.++.. ..+| ++|+++.+.|+++..+++..|++++
T Consensus 92 ~~~~l~~~la~~~~~~-~~----i--~~~sG-~~a~~~~~~~l~~---~~~g---d~Vl~~~~~~~~~~~~~~~~g~~~~ 157 (401)
T 2bwn_A 92 YHRRLEAEIAGLHQKE-AA----L--VFSSA-YNANDATLSTLRV---LFPG---LIIYSDSLNHASMIEGIKRNAGPKR 157 (401)
T ss_dssp HHHHHHHHHHHHTTCS-EE----E--EESCH-HHHHHHHHHHHHH---HSTT---CEEEEETTCCHHHHHHHHHSCCCEE
T ss_pred HHHHHHHHHHHHhCCC-cE----E--EECCc-HHHHHHHHHHHhc---CCCC---CEEEECchhhHHHHHHHHHcCCeEE
Confidence 3456677888899874 33 3 55554 5588777776532 1356 8999999999999999999999999
Q ss_pred EeeCCCCCccCHHHHHHhhc----cCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhh-hhhhhcCCC
Q 013675 252 RVPVDKEFRADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVL-PFAKKLGYP 326 (438)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~I~----~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~-pf~~~~g~~ 326 (438)
.+|.+ |+++++++++ ++|++|++++++||+|.+.|+++|.++|++||+++++|++|+.+.. | .|..
T Consensus 158 ~v~~~-----d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~----~g~~ 228 (401)
T 2bwn_A 158 IFRHN-----DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGP----RGAG 228 (401)
T ss_dssp EECTT-----CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSST----TSCC
T ss_pred EEcCC-----CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCC----CCce
Confidence 99975 7899999887 5799999999999999999999999999999999999999983321 1 0100
Q ss_pred CC-CCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHc
Q 013675 327 IP-PFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG 405 (438)
Q Consensus 327 ~p-~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g 405 (438)
.. ..+. ..+.|.+..+++|.+ +..| |+++.+ +++..........|. + ..++.+ ...+++.++++.+.
T Consensus 229 ~~~~~~~-~~~~~i~~~s~sK~~-~~~G-G~~~~~-~~~~~~l~~~~~~~~---~----~~~~~~-~~~~a~~~al~~~~ 296 (401)
T 2bwn_A 229 VAERDGL-MHRIDIFNGTLAKAY-GVFG-GYIAAS-ARMVDAVRSYAPGFI---F----STSLPP-AIAAGAQASIAFLK 296 (401)
T ss_dssp HHHHHTC-GGGCSEEEEESSSTT-CSCC-EEEEEC-HHHHHHHHHHCHHHH---T----SBCCCH-HHHHHHHHHHHHHT
T ss_pred eeeccCc-cccCcEEEeechhhc-cCCC-CEEecC-HHHHHHHHHhCcCce---e----cCCCCH-HHHHHHHHHHHHHH
Confidence 00 0010 123588888999994 5455 776654 433322111011110 0 011212 34556677887776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 406 QEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 406 ~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
..|+++..++..++++++.+.|+++ |+++
T Consensus 297 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 325 (401)
T 2bwn_A 297 TAEGQKLRDAQQMHAKVLKMRLKAL-GMPI 325 (401)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHH-TCCB
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence 6778899999999999999999876 5543
No 155
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.79 E-value=5.7e-18 Score=174.93 Aligned_cols=246 Identities=13% Similarity=0.120 Sum_probs=168.7
Q ss_pred CCcccchhHHHHHHHHHHHHHHHhC-C--CCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCC-CCCeEEecCCCc
Q 013675 161 LHLDIFQSVARFEAEVIAMTAALLG-N--KEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAH 236 (438)
Q Consensus 161 ~~~~~~~~~~~~e~~~~~~~a~l~g-~--~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~-~~~~Viv~~~~h 236 (438)
..|..+.+..++++++.+++.+..| . ++++ + ++|+|+++++.++++++.+ +|- .+++|+++.+.|
T Consensus 123 ~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~----i--~~t~G~~~ai~~~~~~l~~-----~gd~~~d~Vlv~~p~y 191 (498)
T 3ihj_A 123 GSYSASQGVNCIREDVAAYITRRDGGVPADPDN----I--YLTTGASDGISTILKILVS-----GGGKSRTGVMIPIPQY 191 (498)
T ss_dssp -----CCSCHHHHHHHHHHHHHHTTTCCCCGGG----E--EEESSHHHHHHHHHHHHCC-----CCGGGSEEEEEEESCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhcCCCCCCccc----E--EEcCCHHHHHHHHHHHHcC-----CCCCCCCEEEEeCCCc
Confidence 4456677778889999999988875 5 3444 6 8999999999999998763 441 124899999999
Q ss_pred CcHHHHHhhcCcEEEEeeCCC--CCccCHHHHHHhhcc-----CcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeE
Q 013675 237 SAYDKAAQYFNIKLWRVPVDK--EFRADVKAIKKYINR-----NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCL 306 (438)
Q Consensus 237 ~s~~~a~~~~Gi~v~~v~~~~--~~~~d~~~Le~~I~~-----~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~l 306 (438)
+++..+++..|++++.+++++ ++.+|+++|++++++ ++++|++++|+||||.+.+ +++|+++|++||+++
T Consensus 192 ~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~l 271 (498)
T 3ihj_A 192 PLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFL 271 (498)
T ss_dssp THHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred hhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEE
Confidence 999999999999999999986 578999999999987 6899999999999999965 677999999999999
Q ss_pred EEeccccchhhhhhhhcCCCCCCCccCC--------CCcc-EEEeCCCCCCC--CCCCcEEEEE--ecccccccchhccc
Q 013675 307 HVDLCLGGFVLPFAKKLGYPIPPFDFSV--------QGVT-SISVDVHKYGL--APKGTSVVLY--RNREIRKHQFVAVT 373 (438)
Q Consensus 307 hVD~a~gg~~~pf~~~~g~~~p~~~~~~--------~gvd-sis~s~hK~~~--~p~g~g~l~~--r~~~~~~~~~~~~~ 373 (438)
++|++|+.+... . +...+++.... ..+. ++..+++|.+. ++..+|++++ .++++.........
T Consensus 272 i~De~y~~~~~~--~--~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~ 347 (498)
T 3ihj_A 272 LADEVYQDNVYS--P--DCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLS 347 (498)
T ss_dssp EEECTTTTCBCC--T--TCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHH
T ss_pred EEEcCccccccC--C--CCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHh
Confidence 999999865531 0 00011111000 1222 45568899953 4556888775 45554433211111
Q ss_pred ccCCCccCCCCccCCCCCchHHHHHHHHHHHc------------HHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 374 EWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG------------QEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 374 ~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g------------~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+. .....++.+....+. .+...++.++..++++++.+.|+++||+++
T Consensus 348 ~~~--------------~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~ 407 (498)
T 3ihj_A 348 VRL--------------CPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHC 407 (498)
T ss_dssp HSC--------------CCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred ccC--------------CCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEe
Confidence 000 011112322222221 122456667888999999999999988765
No 156
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.79 E-value=5.7e-18 Score=169.03 Aligned_cols=244 Identities=11% Similarity=0.054 Sum_probs=160.3
Q ss_pred CcccchhHHHHHHHHHHHHHHHhCC--CCC--CCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcC
Q 013675 162 HLDIFQSVARFEAEVIAMTAALLGN--KEK--ASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (438)
Q Consensus 162 ~~~~~~~~~~~e~~~~~~~a~l~g~--~~~--~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~ 237 (438)
.|...++..++.+++.+++....+. +++ + + ++|+|||+|+.++++..... .+| ++|+++.++|.
T Consensus 65 ~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~----i--~~t~g~~~a~~~~~~~~~~~---~~g---d~vl~~~p~~~ 132 (397)
T 3fsl_A 65 LYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVA----T--IQTLGGSGALKVGADFLKRY---FPE---SGVWVSDPTWE 132 (397)
T ss_dssp CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEE----E--EEESHHHHHHHHHHHHHHHH---CTT---CCEEEESSCCH
T ss_pred cCCCCCchHHHHHHHHHHHhcCCcccccccceE----E--EEcCCcHHHHHHHHHHHHhc---CCC---CeEEEeCCCch
Confidence 3444556666666666665443331 333 4 6 89999999999996543311 366 89999999999
Q ss_pred cHHHHHhhcCcEEEEeeC--CCCCccCHHHHHHhhc---cCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEe
Q 013675 238 AYDKAAQYFNIKLWRVPV--DKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVD 309 (438)
Q Consensus 238 s~~~a~~~~Gi~v~~v~~--~~~~~~d~~~Le~~I~---~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD 309 (438)
++...++..|.+++.+|+ ++++.+|+++++++++ ++++++++++|+||||.+.+ +++|+++|+++|+++++|
T Consensus 133 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~D 212 (397)
T 3fsl_A 133 NHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLD 212 (397)
T ss_dssp HHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred hHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEe
Confidence 999999999999999998 4578999999999998 67899999999999999955 669999999999999999
Q ss_pred ccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCC--cEEEEE--ecccccccchhc-----ccccCCCcc
Q 013675 310 LCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLY--RNREIRKHQFVA-----VTEWSGGLY 380 (438)
Q Consensus 310 ~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g--~g~l~~--r~~~~~~~~~~~-----~~~~~g~~~ 380 (438)
++|+++.... +........+. ...+.+++..+.+|. ++++| +|+++. .+++........ ...|..
T Consensus 213 e~~~~~~~~~-~~~~~~~~~~~-~~~~~~i~~~S~SK~-~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 286 (397)
T 3fsl_A 213 IAYQGFGAGM-EEDAYAIRAIA-SAGLPALVSNSFSKI-FSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSS--- 286 (397)
T ss_dssp ESCTTSSSCT-TGGGHHHHHHH-HTTCCEEEEEECTTT-TTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSS---
T ss_pred cCchhhccCc-ccccHHHHHHH-hcCCCEEEEeccccc-ccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCC---
Confidence 9998765310 00000000010 123346778888999 55545 788765 333332211100 001110
Q ss_pred CCCCccCCCCCchHHHHHHHHHHH-----cHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013675 381 VSPTVAGSRPGGLIAGAWAALMSL-----GQEGYLENTKAIMEVSESIQKGLVLFP 431 (438)
Q Consensus 381 ~~~~~~gsr~~~~ia~~~aal~~~-----g~~g~~~~~~~~~~~a~~l~~~L~~~~ 431 (438)
.+....+++..++..- ..+.+++..++..++++++.+.|++++
T Consensus 287 --------~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 334 (397)
T 3fsl_A 287 --------PPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEM 334 (397)
T ss_dssp --------CCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred --------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0111111111222110 145677888889999999999998764
No 157
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.79 E-value=4.5e-19 Score=188.48 Aligned_cols=228 Identities=11% Similarity=0.067 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEE
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWR 252 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~ 252 (438)
..++.+.+|+++|.+.. + ++++|+|.||..++.++. ++| |+|+++...|.|+..++...|++++.
T Consensus 197 i~eaE~~lA~~fGa~~a-----~--~v~nGts~An~~ai~al~-----~pG---D~VLv~r~~H~S~~~~l~lsGa~pv~ 261 (715)
T 3n75_A 197 HKEAEQYIARVFNADRS-----Y--MVTNGTSTANKIVGMYSA-----PAG---STILIDRNCHKSLTHLMMMSDVTPIY 261 (715)
T ss_dssp HHHHHHHHHHHHTCSEE-----E--EESSHHHHHHHHHHHHHC-----CTT---CEEEEESSCCHHHHHHHHHSCCEEEE
T ss_pred HHHHHHHHHHHhCCCCc-----e--EECcHHHHHHHHHHHHhC-----CCC---CEEEECCCccHHHHHHHHHcCCEEEE
Confidence 44556679999999754 2 567777899999998876 378 99999999999999999999999999
Q ss_pred eeCCC-CCc----c-----CHHHHHHhhccC--cE---EEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhh
Q 013675 253 VPVDK-EFR----A-----DVKAIKKYINRN--TV---LIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVL 317 (438)
Q Consensus 253 v~~~~-~~~----~-----d~~~Le~~I~~~--t~---~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~ 317 (438)
++.+. ++. + |+++++++|+++ ++ ++++++| |++|.+.|+++|+++|++++ +++|+||++.+.
T Consensus 262 v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~ 338 (715)
T 3n75_A 262 FRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTN 338 (715)
T ss_dssp ECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGG
T ss_pred EeccccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccc
Confidence 98753 233 3 899999999853 34 8999999 88999999999999998763 899999987642
Q ss_pred hhhhhcCCCCCCCccCCC--CccEE---EeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCc
Q 013675 318 PFAKKLGYPIPPFDFSVQ--GVTSI---SVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG 392 (438)
Q Consensus 318 pf~~~~g~~~p~~~~~~~--gvdsi---s~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~ 392 (438)
|... .|....... ++|.+ +.|+||++.++.++|++.++++ .....+.....+ ...++.+..
T Consensus 339 -f~~~----~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~-i~~~~~~~~~~~--------~~STSpsy~ 404 (715)
T 3n75_A 339 -FSPI----YEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETFNEAYMM--------HTTTSPHYG 404 (715)
T ss_dssp -GSGG----GTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESC-CCHHHHHHHHHH--------TSCSSCCHH
T ss_pred -cCCc----cccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCch-hhHHHHHHHHHh--------hcCCCchHH
Confidence 2111 111111111 25655 8999999888888999998865 221111111111 112234445
Q ss_pred hHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 013675 393 LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPM 432 (438)
Q Consensus 393 ~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g 432 (438)
+++++-++++.+-...-.+..++..+++++++++|+++++
T Consensus 405 ~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~ 444 (715)
T 3n75_A 405 IVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRT 444 (715)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhh
Confidence 6778888887775422355788999999999999988754
No 158
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.79 E-value=7e-19 Score=176.19 Aligned_cols=235 Identities=14% Similarity=0.034 Sum_probs=158.6
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCCCCCCccceeE-cCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc-HHHHH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCGNM-TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAA 243 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~-t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s-~~~a~ 243 (438)
.+...++.+++++++++++|++..+ ++ ++ |+|||+|+.++++++.. +| .++++...|.. +...+
T Consensus 73 ~~~~~~~~~~~~~~la~~~g~~~~~---~i--~~~t~g~t~al~~~~~~l~~-----~g----v~~v~~~~~~~~~~~~~ 138 (398)
T 2fyf_A 73 QAPVKNLVGRVRSGLAELFSLPDGY---EV--ILGNGGATAFWDAAAFGLID-----KR----SLHLTYGEFSAKFASAV 138 (398)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCTTC---EE--EEEETCHHHHHHHHHHHTCS-----SC----EEEEECSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCc---eE--EEeCCchhHHHHHHHHHhcC-----CC----eEEEeCCHHHHHHHHHH
Confidence 4566677889999999999997432 14 77 99999999999998742 23 24444444532 23345
Q ss_pred hhc--CcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhh
Q 013675 244 QYF--NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 244 ~~~--Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~ 321 (438)
..+ |.+++.+|++.+...+. .++++|++|++++++||||.+.|+++|.++ +|+++|+|++++.+..
T Consensus 139 ~~~~~g~~~~~v~~~~g~~~~~-----~i~~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~---- 206 (398)
T 2fyf_A 139 SKNPFVGEPIIITSDPGSAPEP-----QTDPSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGL---- 206 (398)
T ss_dssp HHCTTSCCCEEEECCTTCCCCC-----CCCTTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTS----
T ss_pred HHhCCCCceEEEecCCCCCCCc-----cccCCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCc----
Confidence 666 88999999874333332 267789999999999999999999999887 8999999999875443
Q ss_pred hcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhc------ccccCCCccC----CCCccCCCCC
Q 013675 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVA------VTEWSGGLYV----SPTVAGSRPG 391 (438)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~------~~~~~g~~~~----~~~~~gsr~~ 391 (438)
+++.. ++|+++.++||++..|.|+|+++.+++......... .+.+.++... .....++.+.
T Consensus 207 -------~~~~~--~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 277 (398)
T 2fyf_A 207 -------PVDIA--ETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAI 277 (398)
T ss_dssp -------CCCGG--GCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCH
T ss_pred -------ccCcc--cCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCH
Confidence 23322 479999999999555547898777654322110000 0001110000 0011122222
Q ss_pred chHHHHHHHHHHHcHHH-HHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 392 GLIAGAWAALMSLGQEG-YLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 392 ~~ia~~~aal~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
..++++.++++.+...| +++..++..++++++.+.|+++|++++
T Consensus 278 ~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 322 (398)
T 2fyf_A 278 ATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTP 322 (398)
T ss_dssp HHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCcee
Confidence 33556777887776666 899999999999999999999888764
No 159
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.79 E-value=1.3e-18 Score=174.74 Aligned_cols=225 Identities=15% Similarity=0.087 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEE
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKL 250 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v 250 (438)
+...++++++++++|.+.. +++++||+++..+++++. .+| ++|+++.+.|+++..+++..|.++
T Consensus 104 ~~~~~l~~~la~~~g~~~~--------i~~~sGt~a~~~~l~~~~-----~~g---d~Vl~~~~~~~~~~~~~~~~g~~~ 167 (409)
T 3kki_A 104 YDKPMIEKRLAKFTGFDEC--------LLSQSGWNANVGLLQTIC-----QPN---TNVYIDFFAHMSLWEGARYANAQA 167 (409)
T ss_dssp TTSCHHHHHHHHHHTCSEE--------EEESCHHHHHHHHHHHHC-----CTT---CEEEEETTSCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHhCCCeE--------EEecchHHHHHHHHHHhc-----CCC---CEEEECCCcCHHHHHHHHHcCCeE
Confidence 4455677789999988642 566778899999999875 367 899999999999999999999999
Q ss_pred EEeeCCCCCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCC-CC
Q 013675 251 WRVPVDKEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYP-IP 328 (438)
Q Consensus 251 ~~v~~~~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~-~p 328 (438)
+.++. .|+++|++++++ ++++|++++++||+|.+.|+++|.++|++||+++++|++|+++.... .|.. ..
T Consensus 168 ~~~~~-----~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~---~g~~~~~ 239 (409)
T 3kki_A 168 HPFMH-----NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGP---NGAGLLA 239 (409)
T ss_dssp EEECT-----TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSG---GGCCHHH
T ss_pred EEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCC---CCCcchh
Confidence 88875 589999999986 58999999999999999999999999999999999999997644310 0100 00
Q ss_pred CCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHHH
Q 013675 329 PFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEG 408 (438)
Q Consensus 329 ~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g 408 (438)
.++. ..++|+++.+.+|++ ++.| |+++.++ ++.+........+.. .++.+...++++.++++.+. .
T Consensus 240 ~~~~-~~~~di~~~s~sK~~-~~~g-g~v~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~aa~~aal~~~~--~ 305 (409)
T 3kki_A 240 ELGL-TREVHFMTASLAKTF-AYRA-GAIWCNN-EVNRCVPFISYPAIF--------SSTLLPYEAAGLETTLEIIE--S 305 (409)
T ss_dssp HHTC-GGGCSEEEEESSSTT-CSSC-EEEEESS-SGGGTHHHHCHHHHH--------SBCCCHHHHHHHHHHHHHHH--H
T ss_pred hcCC-CCCCCEEEeecchhh-CCCc-eEEEECH-HHHHHHHHhCcCccc--------cCCCcHHHHHHHHHHHHHHh--c
Confidence 0111 135789999999995 4444 7766654 433321111111100 00111122345555665442 2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 409 YLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 409 ~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
.++..++..++++++.+.|+++ +++
T Consensus 306 ~~~~~~~~~~~~~~l~~~L~~~-g~~ 330 (409)
T 3kki_A 306 ADNRRQHLDRMARKLRIGLSQL-GLT 330 (409)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTT-TCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 2577788889999999999887 444
No 160
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.78 E-value=4.5e-18 Score=166.22 Aligned_cols=211 Identities=17% Similarity=0.146 Sum_probs=154.5
Q ss_pred HHHHHHHHHHhC---CCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEE
Q 013675 174 AEVIAMTAALLG---NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKL 250 (438)
Q Consensus 174 ~~~~~~~a~l~g---~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v 250 (438)
.++++.++++++ .++++ + ++|+|+++++.++++++ | ++|+++ ++|.++...++..|+++
T Consensus 59 ~~lr~~la~~~~~~~~~~~~----v--~~~~G~~~al~~~~~~~--------g---d~Vl~~-p~y~~~~~~~~~~g~~~ 120 (335)
T 1uu1_A 59 EELIEKILSYLDTDFLSKNN----V--SVGNGADEIIYVMMLMF--------D---RSVFFP-PTYSCYRIFAKAVGAKF 120 (335)
T ss_dssp HHHHHHHHHHHTCSSCCGGG----E--EEESSHHHHHHHHHHHS--------S---EEEECS-SSCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHcCCCCCCHHH----E--EEcCChHHHHHHHHHHh--------C---CcEEEC-CCcHHHHHHHHHcCCeE
Confidence 456667888888 66654 6 89999999999999886 4 789999 99999999999999999
Q ss_pred EEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCC
Q 013675 251 WRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF 330 (438)
Q Consensus 251 ~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~ 330 (438)
+.+|+++++.+|++++ ++|++|++++|+||||.+.|.+++.++++.+| ++++|++|+++.. . +..
T Consensus 121 ~~v~~~~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~---~------~~~ 185 (335)
T 1uu1_A 121 LEVPLTKDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHG---E------SYV 185 (335)
T ss_dssp EECCCCTTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHC---C------CCG
T ss_pred EEeccCCCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcc---h------hHH
Confidence 9999987788898887 57899999999999999999999999999989 9999999986532 0 012
Q ss_pred c-cCCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHH
Q 013675 331 D-FSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQE 407 (438)
Q Consensus 331 ~-~~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~ 407 (438)
+ ....+.+++..+++|+ ++++| +|+++.+ +++.+........| +.+....+++.++++. .+
T Consensus 186 ~~~~~~~~~i~~~s~sK~-~g~~G~r~G~~~~~-~~~~~~l~~~~~~~------------~~~~~~~~~~~~~l~~--~~ 249 (335)
T 1uu1_A 186 DFLKKYENLAVIRTFSKA-FSLAAQRVGYVVAS-EKFIDAYNRVRLPF------------NVSYVSQMFAKVALDH--RE 249 (335)
T ss_dssp GGGGTCSSEEEEEESTTT-TTCGGGCCEEEEEC-HHHHHHHHHHSCTT------------CSCHHHHHHHHHHHHT--HH
T ss_pred HHhhhCCCEEEEecchhh-cCCcccCeEEEEeC-HHHHHHHHHhcCCC------------CcCHHHHHHHHHHhCC--HH
Confidence 2 1234567889999999 45444 7998874 44433211111111 1111112233333432 24
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 408 GYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 408 g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
.+++..++..++++++.+.|+++ |++
T Consensus 250 ~~~~~~~~~~~~~~~l~~~L~~~-g~~ 275 (335)
T 1uu1_A 250 IFEERTKFIVEERERMKSALREM-GYR 275 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CcE
Confidence 67788888999999999999876 444
No 161
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.78 E-value=6.7e-18 Score=168.93 Aligned_cols=241 Identities=12% Similarity=0.095 Sum_probs=159.2
Q ss_pred CcccchhHHHHHHHHHHHHHHHhCC--CCCCCCCccceeE--cCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcC
Q 013675 162 HLDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNM--TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (438)
Q Consensus 162 ~~~~~~~~~~~e~~~~~~~a~l~g~--~~~~~~~~v~g~~--t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~ 237 (438)
.|....+..++.+.+.+++....|. ++++ + ++ |+|||+|+.+++++++... ++| ++|+++.++|.
T Consensus 66 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~----i--~~v~t~G~~~al~~~~~~l~~~~--~~g---d~Vlv~~p~~~ 134 (401)
T 7aat_A 66 EYLPIAGLADFTRASAELALGENSEAFKSGR----Y--VTVQGISGTGSLRVGANFLQRFF--KFS---RDVYLPKPSWG 134 (401)
T ss_dssp CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTC----E--EEEEEEHHHHHHHHHHHHHHHHC--TTC---CEEEEEESCCT
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCccccccCc----e--EEEecCcchHHHHHHHHHHHHhc--cCC---CEEEEcCCCch
Confidence 3444455566666666666544443 2444 5 55 9999999999988875321 256 89999999999
Q ss_pred cHHHHHhhcCcEEEEeeCC--CCCccCHHHHHHhhc---cCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEe
Q 013675 238 AYDKAAQYFNIKLWRVPVD--KEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVD 309 (438)
Q Consensus 238 s~~~a~~~~Gi~v~~v~~~--~~~~~d~~~Le~~I~---~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD 309 (438)
.+...++..|.+++.+|++ +++.+|++++++.+. ++++++++++|+||||.+.+ +++|+++|++||+++++|
T Consensus 135 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 214 (401)
T 7aat_A 135 NHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFD 214 (401)
T ss_dssp THHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred hHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEc
Confidence 9999999999999999985 378999997777765 57899999999999997755 788999999999999999
Q ss_pred ccccchhhhhhhhcCCCCCCCc--cCCCCccEEEeCCCCCCCCCCC--cEEEEEe--ccccc----ccchhcccccCCCc
Q 013675 310 LCLGGFVLPFAKKLGYPIPPFD--FSVQGVTSISVDVHKYGLAPKG--TSVVLYR--NREIR----KHQFVAVTEWSGGL 379 (438)
Q Consensus 310 ~a~gg~~~pf~~~~g~~~p~~~--~~~~gvdsis~s~hK~~~~p~g--~g~l~~r--~~~~~----~~~~~~~~~~~g~~ 379 (438)
.+|+++...-.. .. .+.+. .....-.+++.+++|. ++++| +|+++.. +++.. .........+..
T Consensus 215 eay~~~~~~~~~-~~--~~~~~~~~~~~~~~i~~~S~sK~-~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~-- 288 (401)
T 7aat_A 215 MAYQGFASGDIN-RD--AWALRHFIEQGIDVVLSQSYAKN-MGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYS-- 288 (401)
T ss_dssp ESCTTTTTSCHH-HH--THHHHHHHHTTCCCEEEEECTTT-SCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHS--
T ss_pred cccccccCCCcc-cc--HHHHHHHHhcCCcEEEEecCCcc-cccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccC--
Confidence 999766531000 00 00010 0122346788999999 56555 7887762 33311 111100000000
Q ss_pred cCCCCccCCCCCchHHHHHHHHHHH--c------HHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 380 YVSPTVAGSRPGGLIAGAWAALMSL--G------QEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 380 ~~~~~~~gsr~~~~ia~~~aal~~~--g------~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
..+ ..++.++...+ + .+.+++..++..++++++.+.|+++
T Consensus 289 --------~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 336 (401)
T 7aat_A 289 --------NPP---MNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKE 336 (401)
T ss_dssp --------SCC---HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------CCC---hHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 000 11222222222 1 3446777788889999999999876
No 162
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.78 E-value=5e-18 Score=170.71 Aligned_cols=228 Identities=16% Similarity=0.123 Sum_probs=151.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc-HHHHH--hhcC
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAA--QYFN 247 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s-~~~a~--~~~G 247 (438)
.+++..++++++++|.+... ++++|||+|+..+++++. ++| ++|+++.++|.+ +...+ ...|
T Consensus 78 ~~~~~a~~~~~~~~~~~~~~-------v~~~~Gs~a~~~al~~~~-----~~g---d~Vi~~~~~~~~~~~~~~~~~~~g 142 (425)
T 3ecd_A 78 EVEALAIERVKRLFNAGHAN-------VQPHSGAQANGAVMLALA-----KPG---DTVLGMSLDAGGHLTHGAKPALSG 142 (425)
T ss_dssp HHHHHHHHHHHHHHTCSEEE-------CCCSSHHHHHHHHHHHHC-----CTT---CEEEEECC----------------
T ss_pred HHHHHHHHHHHHHhCCCCce-------eecCchHHHHHHHHHHcc-----CCC---CEEEEcccccccceecchhhhhcc
Confidence 34555557888999987642 568999999999998874 367 899999999988 22222 2445
Q ss_pred c--EEEEeeCCC-CCccCHHHHHHhhc-cCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhc
Q 013675 248 I--KLWRVPVDK-EFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (438)
Q Consensus 248 i--~v~~v~~~~-~~~~d~~~Le~~I~-~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~ 323 (438)
. +++.++.++ ++.+|+++|+++++ ++|++|++++|+| |...++++|.++|++||+++|+|++++.+... .
T Consensus 143 ~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~----~ 216 (425)
T 3ecd_A 143 KWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMAHIAGVIA----A 216 (425)
T ss_dssp --CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHH----T
T ss_pred cceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECcChHhhhh----c
Confidence 4 556666664 68899999999997 5899999998877 67899999999999999999999996544331 1
Q ss_pred CCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHH
Q 013675 324 GYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMS 403 (438)
Q Consensus 324 g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~ 403 (438)
+. ... ....+|+++.++||++.+|. .|+++.+++.+......... . ...++.....++++.+++..
T Consensus 217 ~~---~~~-~~~~~di~~~s~sK~l~g~~-~g~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~a~~~a~~~ 282 (425)
T 3ecd_A 217 GR---HAN-PVEHAHVVTSTTHKTLRGPR-GGFVLTNDEEIAKKINSAVF--P-------GLQGGPLMHVIAGKAVAFGE 282 (425)
T ss_dssp TS---SCC-GGGTCSEEEEESSGGGCCCS-CEEEEESCHHHHHHHHHHHC--------------CCCHHHHHHHHHHHHH
T ss_pred cc---ccC-chhcCcEEEecCCcccCCCC-cEEEEeCCHHHHHHHHhhhC--c-------cccCCccHHHHHHHHHHHHH
Confidence 11 011 11237899999999975665 58877775544332111100 0 11112222334566667666
Q ss_pred HcHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 404 LGQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 404 ~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
...+++++..++..++++++.+.|++. |++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 312 (425)
T 3ecd_A 283 ALTDDFKTYIDRVLANAQALGDVLKAG-GVD 312 (425)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhC-CCe
Confidence 666788899999999999999999874 544
No 163
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.78 E-value=2e-18 Score=169.91 Aligned_cols=220 Identities=13% Similarity=0.053 Sum_probs=148.3
Q ss_pred HHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCC--eEEecCCCcCcHHH---HHhhcCcE
Q 013675 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRP--EMIIPVSAHSAYDK---AAQYFNIK 249 (438)
Q Consensus 175 ~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~--~Viv~~~~h~s~~~---a~~~~Gi~ 249 (438)
++++++++++|.+. .++++|||+|+.++++++.. +| + +|+++...|++... .+...|++
T Consensus 51 ~l~~~la~~~~~~~--------~i~~~~G~~a~~~al~~~~~-----~g---d~~~vi~~~~~~~~~~~~~~~~~~~g~~ 114 (357)
T 3lws_A 51 PFEQKFADVLGMDD--------AVFFPSGTMAQQVALRIWSD-----ET---DNRTVAYHPLCHLEIHEQDGLKELHPIE 114 (357)
T ss_dssp HHHHHHHHHHTCSE--------EEEESCHHHHHHHHHHHHHH-----HH---TCCEEEECTTCHHHHSSTTHHHHHSSCE
T ss_pred HHHHHHHHHhCCCc--------EEEecCcHHHHHHHHHHHhh-----cC---CCcEEEecccceeeeeccchhhhccCcE
Confidence 44457888888753 26779999999999988764 33 4 78888888877654 45566999
Q ss_pred EEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCC-ccccC---HHHHHHHHHHcCCeEEEeccccchhhhhhhhcCC
Q 013675 250 LWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPH-GIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGY 325 (438)
Q Consensus 250 v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~t-G~idd---i~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~ 325 (438)
++.+|. +++.+|+++++++. ++++|++++|+||+ |.+.+ +++|+++|++||+++|+|++|......+ .+.
T Consensus 115 ~~~v~~-~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~---~~~ 188 (357)
T 3lws_A 115 TILVGA-ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPY---YEK 188 (357)
T ss_dssp EEECSC-TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHH---HTC
T ss_pred EEEecC-CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhh---cCC
Confidence 998885 46789999999984 38999999999998 98875 8899999999999999999986322221 111
Q ss_pred CCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCc-hHHHHHHHHHHH
Q 013675 326 PIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG-LIAGAWAALMSL 404 (438)
Q Consensus 326 ~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~-~ia~~~aal~~~ 404 (438)
+......++|+++.++||++.+|.| |+++. ++++.+........+.+. .+... ..++..++++.
T Consensus 189 ---~~~~~~~~~d~~~~s~sK~~~~~~g-g~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~- 253 (357)
T 3lws_A 189 ---TAAEIAGLFDSIYISFYKGLGGIAG-AILAG-PAAFCQTARIWKRRYGGD---------LISLYPYIVSADYYYEL- 253 (357)
T ss_dssp ---CHHHHHTTSSEEEEESSSTTCCSSC-EEEEE-CHHHHHHHHHHHHHTTCC---------CSCCHHHHHHHHHHHHH-
T ss_pred ---ChHHHHhcCCEEEEeccccCCCCce-EEEEc-CHHHHHHHHHHHHHhcCC---------cccchHHHHHHHHHHHH-
Confidence 1111113568889999999668887 77554 454443321111111111 11111 11122233322
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 405 GQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 405 g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
..+..++..++++++.+.|+++|++++
T Consensus 254 ----~~~~~~~~~~~~~~l~~~L~~~~g~~~ 280 (357)
T 3lws_A 254 ----RKDRMGQYYEQAKQLAEQFNALPGVHT 280 (357)
T ss_dssp ----HTTCHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence 344455667889999999999998876
No 164
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.78 E-value=4.8e-18 Score=173.10 Aligned_cols=236 Identities=14% Similarity=0.150 Sum_probs=154.9
Q ss_pred CcccchhHHHHHHHHHHHHHHHhCCC-----CCCCCCccceeE--cCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCC
Q 013675 162 HLDIFQSVARFEAEVIAMTAALLGNK-----EKASGGQVCGNM--TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVS 234 (438)
Q Consensus 162 ~~~~~~~~~~~e~~~~~~~a~l~g~~-----~~~~~~~v~g~~--t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~ 234 (438)
.|...++..++.+++.+++ +|.+ +++ + ++ |+|||+|+.+++..... ..+| ++|+++.+
T Consensus 89 ~Y~~~~G~~~lr~~ia~~l---~g~~~~~~~~~~----i--~~~~t~ggt~al~l~~~~~~~---~~~g---d~Vlv~~p 153 (448)
T 3meb_A 89 EYPPVAGFPLFLEAAQFLM---FGKDSKAAQEGR----I--ASCQSLSGTGSLHIGFEFLHL---WMPK---AEFYMPST 153 (448)
T ss_dssp SCCCTTCCHHHHHHHHHHH---HCTTCHHHHTTC----E--EEEEESHHHHHHHHHHHHHHH---HCTT---CCEEEESS
T ss_pred CCCCCcchHHHHHHHHHHh---cCCCccccCcCc----E--EEEECCcHHHHHHHHHHHHHH---hCCC---CEEEECCC
Confidence 3444455555555444443 3766 344 6 77 99999999885443221 1266 89999999
Q ss_pred CcCcHHHHHh----hcCcEEEEeeC-CCC--CccCHHHHHHhhcc---CcEEEEEecCCCCCccccC---HHHHHHHHHH
Q 013675 235 AHSAYDKAAQ----YFNIKLWRVPV-DKE--FRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDP---IQELGELALS 301 (438)
Q Consensus 235 ~h~s~~~a~~----~~Gi~v~~v~~-~~~--~~~d~~~Le~~I~~---~t~~vv~~~~~~~tG~idd---i~~I~~la~~ 301 (438)
+|.++...++ ..|++++.+|+ +++ +.+|++++++++++ +++++++++|+||||.+.+ +++|+++|++
T Consensus 154 ~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~ 233 (448)
T 3meb_A 154 TWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKE 233 (448)
T ss_dssp CCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999999 99999999998 654 89999999999984 5889999999999999977 5569999999
Q ss_pred cCCeEEEeccccchhhhhhhhcCCCCCCCc-c-CCCCccEEEeCCCCCCCCCCC--cEEE--EE--------ecc----c
Q 013675 302 HGTCLHVDLCLGGFVLPFAKKLGYPIPPFD-F-SVQGVTSISVDVHKYGLAPKG--TSVV--LY--------RNR----E 363 (438)
Q Consensus 302 ~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~-~-~~~gvdsis~s~hK~~~~p~g--~g~l--~~--------r~~----~ 363 (438)
||+++++|++|+++...-... . .+.++ + ....-.+++.++||. ++++| +|++ +. .++ .
T Consensus 234 ~~~~li~Deay~~~~~~~~~~-~--~~~~~~~~~~~~~~i~~~S~SK~-~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~ 309 (448)
T 3meb_A 234 KKHIAFFDSAYQGFATGSFEA-D--AFAVRMFVDAGVEVLVAQSFSKN-FGLYGERIGCLHVVHAGVEGSVEKNKALSAA 309 (448)
T ss_dssp HTCEEEEEESCTTTSSSCHHH-H--THHHHHHHHTTCCEEEEEECTTT-SCCGGGCCEEEEEECCCCSSSHHHHHHHHHH
T ss_pred CCCEEEEecccccccCCCccc-C--chhHHHHhhcCCcEEEEeccccc-CCCccccceeeeeeeccccccccCCHHHHHH
Confidence 999999999998765310000 0 00000 0 111224668899999 56555 7887 44 343 2
Q ss_pred ccccchh-cccccCCCccCCCCccCCCCCchHHHHHHHHHHHcH--------HHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 364 IRKHQFV-AVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ--------EGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 364 ~~~~~~~-~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~--------~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
+...... ....|. .....+++++...+.. +.+++..++..++++++.+.|+++
T Consensus 310 l~~~l~~~~~~~~~--------------~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 371 (448)
T 3meb_A 310 MVSGMTLQIRKTWS--------------MSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR 371 (448)
T ss_dssp HHHHHHHHHHTTTS--------------SCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcccC--------------CccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 2211110 000110 0112233333333322 346777888899999999999876
No 165
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.78 E-value=1.2e-18 Score=170.73 Aligned_cols=166 Identities=22% Similarity=0.213 Sum_probs=123.4
Q ss_pred HHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH---HHhhcCcEEE
Q 013675 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK---AAQYFNIKLW 251 (438)
Q Consensus 175 ~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~---a~~~~Gi~v~ 251 (438)
++++.+++++|.+. + ++++|||+|+.++++++. ++| ++|+++.++|.+... .+...|++++
T Consensus 42 ~l~~~la~~~g~~~------~--~~~~~gt~a~~~~~~~~~-----~~g---d~Vl~~~~~~~~~~~~~~~~~~~g~~~~ 105 (347)
T 1jg8_A 42 ELERLAAETFGKEA------A--LFVPSGTMGNQVSIMAHT-----QRG---DEVILEADSHIFWYEVGAMAVLSGVMPH 105 (347)
T ss_dssp HHHHHHHHHHTCSE------E--EEESCHHHHHHHHHHHHC-----CTT---CEEEEETTCHHHHSSTTHHHHHTCCEEE
T ss_pred HHHHHHHHHhCCce------E--EEecCcHHHHHHHHHHhc-----CCC---CEEEEcCcchhhhccccchhhccCeEEE
Confidence 45567888888752 3 789999999999888764 367 899999999977543 5777899999
Q ss_pred EeeCCCCCccCHHHHHHhhcc------CcEEEEEecCCCCC-ccccC---HHHHHHHHHHcCCeEEEeccccchhhhhhh
Q 013675 252 RVPVDKEFRADVKAIKKYINR------NTVLIVGSAPGFPH-GIIDP---IQELGELALSHGTCLHVDLCLGGFVLPFAK 321 (438)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~I~~------~t~~vv~~~~~~~t-G~idd---i~~I~~la~~~~i~lhVD~a~gg~~~pf~~ 321 (438)
.+ .++++.+|+++++++|++ +|++|++++|+||+ |.+.| +++|.++|+++|+++++|+++.-+...
T Consensus 106 ~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~--- 181 (347)
T 1jg8_A 106 PV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASI--- 181 (347)
T ss_dssp EE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHH---
T ss_pred Ee-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchh---
Confidence 88 556788999999999985 68999999999999 99866 578899999999999999986421111
Q ss_pred hcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEeccccc
Q 013675 322 KLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIR 365 (438)
Q Consensus 322 ~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~ 365 (438)
..+. +......++|++++++||++.+|. |++++.++++.
T Consensus 182 ~~~~---~~~~~~~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~ 220 (347)
T 1jg8_A 182 ASGV---PVKEYAGYADSVMFCLSKGLCAPV--GSVVVGDRDFI 220 (347)
T ss_dssp HHCC---CHHHHHHTCSEEEEESSSTTCCSS--CEEEEECHHHH
T ss_pred hcCC---ChHHhcccccEEEEecccccCCCc--eEEEEcCHHHH
Confidence 0111 111112357888889999966664 44445555443
No 166
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.78 E-value=8.7e-18 Score=170.50 Aligned_cols=130 Identities=18% Similarity=0.113 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHH----HHhcCCCCCeEEecCCCcCcHHHHHhhcCc
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYM----RNKRGITRPEMIIPVSAHSAYDKAAQYFNI 248 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~----~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi 248 (438)
..++++.+++++|.+ + + +++++||+|+.++++++.... ...+| ++|+++.++|.++..++...|+
T Consensus 64 ~~~l~~~la~~~g~~--~----~--i~~~sGt~a~~~al~~l~~~~~~~~~~~~g---d~Vi~~~~~~~~~~~~~~~~g~ 132 (437)
T 3bb8_A 64 NDAFEKKLGEYLGVP--Y----V--LTTTSGSSANLLALTALTSPKLGVRALKPG---DEVITVAAGFPTTVNPTIQNGL 132 (437)
T ss_dssp HHHHHHHHHHHHTCS--E----E--EEESCHHHHHHHHHHHTTCGGGGGGSCCTT---CEEEECSSSCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCC--c----E--EEeCCHHHHHHHHHHHhhhcccccccCCCc---CEEEECCCCcHHHHHHHHHcCC
Confidence 345666788899886 2 3 789999999999999873100 01245 8999999999999999999999
Q ss_pred EEEEeeCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchh
Q 013675 249 KLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFV 316 (438)
Q Consensus 249 ~v~~v~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~ 316 (438)
+++.+|+++ ++.+|+++++++++++|++|++++ ++|...|+++|.++|+++|+++|+|++++.+.
T Consensus 133 ~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~ 198 (437)
T 3bb8_A 133 IPVFVDVDIPTYNVNASLIEAAVSDKTKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGS 198 (437)
T ss_dssp EEEECCEETTTTEECGGGHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTC
T ss_pred EEEEEeccCccCCcCHHHHHHhcCCCCeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCc
Confidence 999999986 789999999999999999999886 36888999999999999999999999987443
No 167
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.78 E-value=3.2e-18 Score=168.50 Aligned_cols=223 Identities=14% Similarity=0.107 Sum_probs=148.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCe--EEecCCCcCcHHH---HHhhcC
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPE--MIIPVSAHSAYDK---AAQYFN 247 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~--Viv~~~~h~s~~~---a~~~~G 247 (438)
..++++++++++|.+.. ++++|||+|+.++++++.. +| ++ |+++.+.|+.... .+...|
T Consensus 50 ~~~l~~~la~~~~~~~~--------i~~~~g~~a~~~a~~~~~~-----~g---~~~vvi~~~~~~~~~~~~~~~~~~~g 113 (359)
T 3pj0_A 50 IEDFETKIAKILGKQSA--------VFFPSGTMAQQIALRIWAD-----RK---ENRRVAYHPLSHLEIHEQDGLKELQQ 113 (359)
T ss_dssp HHHHHHHHHHHHTCSEE--------EEESCHHHHHHHHHHHHHH-----HH---TCCEEEECTTCHHHHSSTTHHHHHHC
T ss_pred HHHHHHHHHHHhCCCcE--------EEeCCHHHHHHHHHHHHHh-----cC---CCcEEEEeccceeeehhcchHHHhcC
Confidence 44566678999988642 6779999999999998874 33 44 6677777766543 235569
Q ss_pred cEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCC-ccccCHHH---HHHHHHHcCCeEEEeccccchhhhhhhhc
Q 013675 248 IKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPH-GIIDPIQE---LGELALSHGTCLHVDLCLGGFVLPFAKKL 323 (438)
Q Consensus 248 i~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~t-G~iddi~~---I~~la~~~~i~lhVD~a~gg~~~pf~~~~ 323 (438)
++++.+|. +++.+|+++|+++ .++|++|++++|+||+ |.+.|.++ |+++|++||+++|+|+++..+..++ .
T Consensus 114 ~~~~~v~~-~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~---~ 188 (359)
T 3pj0_A 114 ITPLLLGT-ANQLLTIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPF---Y 188 (359)
T ss_dssp CEEEECSC-TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHH---H
T ss_pred ceEEecCC-cCCCcCHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhh---h
Confidence 99999987 5789999999999 7889999999999888 78877554 5999999999999999986544321 1
Q ss_pred CCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCc-hHHHHHHHHH
Q 013675 324 GYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG-LIAGAWAALM 402 (438)
Q Consensus 324 g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~-~ia~~~aal~ 402 (438)
+. +..++. .++|+++.++||++.+|.| |++ +.++++.+........+.+.. .... ..++..+++.
T Consensus 189 ~~--~~~~~~-~~~d~~~~s~sK~~~~~~g-g~~-~~~~~l~~~~~~~~~~~~~~~---------~~~~~~~~a~~~~l~ 254 (359)
T 3pj0_A 189 QK--SAEEIC-ALFDSVYVSFYKGIGGIAG-AIL-AGNDDFVQEAKIWKRRYGGDL---------ISLYPYILSADYYFE 254 (359)
T ss_dssp TC--CHHHHH-TTCSEEEEESSSTTCCSSC-EEE-EECHHHHHHHHHHHHHTTCCC---------SCCHHHHHHHHHHHH
T ss_pred CC--CHHHhh-ccCCEEEEeccccCCCcce-EEE-ECCHHHHHHHHHHHHHhCCCc---------chhHHHHHHHHHHHH
Confidence 11 111111 4678999999998777765 654 445554433211111111110 1111 1112222332
Q ss_pred HHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 403 SLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 403 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
. ..+..++..++++++.+.|+++|++++
T Consensus 255 ~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~ 282 (359)
T 3pj0_A 255 K-----RIGKMAEYFEAAKGLAERFNSCSGVKT 282 (359)
T ss_dssp H-----HGGGHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred H-----HHHHhHHHHHHHHHHHHHHhhCCCcee
Confidence 1 235566678889999999999988875
No 168
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.78 E-value=1.4e-17 Score=169.58 Aligned_cols=238 Identities=14% Similarity=0.050 Sum_probs=153.7
Q ss_pred cccchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCc-CcHHH
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAH-SAYDK 241 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h-~s~~~ 241 (438)
+...++..+++ +.+++++|.+ + + ++|+|||+|+.++++++. ++| + +++.++| .++..
T Consensus 71 y~~~~~~~~l~----~~la~~~~~~--~----~--~~~~~gt~a~~~al~~l~-----~~g---d--i~~~~~~~~~~~~ 128 (456)
T 2ez2_A 71 YAGSENFYHLE----RTVQELFGFK--H----I--VPTHQGRGAENLLSQLAI-----KPG---Q--YVAGNMYFTTTRY 128 (456)
T ss_dssp SSSCHHHHHHH----HHHHHHHCCS--E----E--EEESSHHHHHHHHHHHHC-----CTT---C--EEEESSCCHHHHH
T ss_pred cccChhHHHHH----HHHHHHhCCC--c----E--EEeCCcHHHHHHHHHHhC-----CCC---C--EeccccccchhHH
Confidence 33455555544 4678888865 2 4 899999999999998874 366 6 7777788 77788
Q ss_pred HHhhcCcEEEEeeCCC----------CCccCHHHHHHhhccCc----EEEEEecCCC-CCccccC---HHHHHHHHHHcC
Q 013675 242 AAQYFNIKLWRVPVDK----------EFRADVKAIKKYINRNT----VLIVGSAPGF-PHGIIDP---IQELGELALSHG 303 (438)
Q Consensus 242 a~~~~Gi~v~~v~~~~----------~~~~d~~~Le~~I~~~t----~~vv~~~~~~-~tG~idd---i~~I~~la~~~~ 303 (438)
++...|++++.+++++ ++.+|+++|+++|+++| ++|++++|+| |+|.+.| +++|+++|++||
T Consensus 129 ~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~ 208 (456)
T 2ez2_A 129 HQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHG 208 (456)
T ss_dssp HHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcC
Confidence 9999999999999873 26899999999998766 8999999998 9999877 999999999999
Q ss_pred CeEEEeccccchhhhhhhhcCCCCCCCcc------CCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCC
Q 013675 304 TCLHVDLCLGGFVLPFAKKLGYPIPPFDF------SVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSG 377 (438)
Q Consensus 304 i~lhVD~a~gg~~~pf~~~~g~~~p~~~~------~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g 377 (438)
+++|+|++|+.+...|....+.......+ .....|++++++||++..| ..|+++.+++++.+........+.+
T Consensus 209 i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~~~~~~~~~~~~ 287 (456)
T 2ez2_A 209 IKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVN-IGGFLCMNDDEMFSSAKELVVVYEG 287 (456)
T ss_dssp CCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCS-SCEEEEESCHHHHHHHHHHHHHHTC
T ss_pred CeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCC-ceeEEEECCHHHHHHHHHHHhhccC
Confidence 99999999975321111110000000000 0122588888899996544 4687777555554322111111111
Q ss_pred CccCCCCccCCCCCchHHH-HHHHHHHHcHHHH-HHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 378 GLYVSPTVAGSRPGGLIAG-AWAALMSLGQEGY-LENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 378 ~~~~~~~~~gsr~~~~ia~-~~aal~~~g~~g~-~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
. .+..|... ..+.+ ..+.+ +.+ ++..++..++++++.+.|++. |++
T Consensus 288 ~----~~~~~~~~-~~~~a~a~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 335 (456)
T 2ez2_A 288 M----PSYGGLAG-RDMEAMAIGLR-----EAMQYEYIEHRVKQVRYLGDKLKAA-GVP 335 (456)
T ss_dssp C----TTTTTCCH-HHHHHHHHHHH-----HHTCHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred c----ccccCcch-hHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHHHhcC-CCc
Confidence 0 01111111 12222 22222 233 456667777888898888874 543
No 169
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.78 E-value=1e-17 Score=170.70 Aligned_cols=228 Identities=16% Similarity=0.130 Sum_probs=159.9
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc-HHHH--H
Q 013675 167 QSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKA--A 243 (438)
Q Consensus 167 ~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s-~~~a--~ 243 (438)
+....+++..++++++++|.+... +++++||+|+..+++++++ +| ++|+++.+.|.+ +... .
T Consensus 87 ~~~~~~e~~a~~~la~~~g~~~~~-------v~~~sGs~a~~~a~~~~~~-----~G---d~Vl~~~~~~~~~~~~~~~~ 151 (447)
T 3h7f_A 87 EHVDVVENLARDRAKALFGAEFAN-------VQPHSGAQANAAVLHALMS-----PG---ERLLGLDLANGGHLTHGMRL 151 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEE-------CCCSSHHHHHHHHHHHHCC-----TT---CEEEEECGGGTCCGGGTCTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCceE-------EEeCCHHHHHHHHHHHhcC-----CC---CEEEecCcccccccchhhhh
Confidence 334455555558999999998642 4588899999999998763 77 899999999877 2211 1
Q ss_pred hh--cCcEEEEeeCCC-CCccCHHHHHHhhc-cCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhh
Q 013675 244 QY--FNIKLWRVPVDK-EFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPF 319 (438)
Q Consensus 244 ~~--~Gi~v~~v~~~~-~~~~d~~~Le~~I~-~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf 319 (438)
.. .+..++.+++++ ++.+|+++++++++ .++++|+++.+++|++. |+++|+++|++||+++|+|+++......
T Consensus 152 ~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~- 228 (447)
T 3h7f_A 152 NFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVA- 228 (447)
T ss_dssp SHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHH-
T ss_pred hhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhc-
Confidence 22 245677777774 78899999999996 47889999899998876 9999999999999999999997543321
Q ss_pred hhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHH
Q 013675 320 AKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWA 399 (438)
Q Consensus 320 ~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~a 399 (438)
.|. . .+ ...++|+++.++||++.+|.| |+++.++ ++.+....... +...|+.....++++.+
T Consensus 229 ---~g~-~--~~-~~~~~di~~~s~sK~l~G~~g-G~i~~~~-~~~~~l~~~~~---------~~~~~~~~~~~~~a~~~ 290 (447)
T 3h7f_A 229 ---AGL-H--PS-PVPHADVVSTTVHKTLGGGRS-GLIVGKQ-QYAKAINSAVF---------PGQQGGPLMHVIAGKAV 290 (447)
T ss_dssp ---TTS-S--CC-STTTCSEEEEESSGGGCCCSC-EEEEECG-GGHHHHHHHHT---------TTTCSSCCHHHHHHHHH
T ss_pred ---CCC-C--CC-CCCCCcEEEecCCcCCCCCCe-EEEEECH-HHHHHHhhhcC---------CcccCCccHHHHHHHHH
Confidence 121 1 11 124679999999999767776 8876654 33322111100 01112222233556667
Q ss_pred HHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 400 ALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 400 al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
++.....+++++..++..++++++.+.|++.
T Consensus 291 a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 291 ALKIAATPEFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp HHHHTTSHHHHHHHHHHHHHHHHHHHHHTSH
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7766556678899999999999999999875
No 170
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.77 E-value=6.2e-18 Score=169.95 Aligned_cols=245 Identities=13% Similarity=0.078 Sum_probs=160.4
Q ss_pred cccchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a 242 (438)
|...++..++.+++.+++.+..+.+..+ ++ ++|+||++|+.++++++. .+| |+|+++.+.|.++...
T Consensus 75 Y~~~~g~~~lr~~la~~~~~~~~~~~~~---~i--~~t~g~~~al~~~~~~~~-----~~g---d~Vl~~~p~~~~~~~~ 141 (413)
T 3t18_A 75 YAPIEGEKDYRKIVIDTLFGPYKPEGYI---SA--IATPGGTGAIRSAIFSYL-----DEG---DPLICHDYYWAPYRKI 141 (413)
T ss_dssp CCCTTCCHHHHHHHHHHHHGGGCCSSEE---EE--EEESHHHHHHHHHHHHHC-----CSS---CEEEEESSCCTHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHhcccCccccC---cE--EEcCccHHHHHHHHHHhc-----CCC---CEEEECCCCcccHHHH
Confidence 3334566777777777776665543221 25 899999999999999875 367 8999999999999999
Q ss_pred HhhcCcEEEEeeC-CCCCccCHHHHHHhhcc----CcE-EEEEecC-CCCCccccCHHHHH---HHHH------HcCCeE
Q 013675 243 AQYFNIKLWRVPV-DKEFRADVKAIKKYINR----NTV-LIVGSAP-GFPHGIIDPIQELG---ELAL------SHGTCL 306 (438)
Q Consensus 243 ~~~~Gi~v~~v~~-~~~~~~d~~~Le~~I~~----~t~-~vv~~~~-~~~tG~iddi~~I~---~la~------~~~i~l 306 (438)
++..|.+++.+|+ ++++.+|+++|++++++ +++ ++++++| +||||.+.|.+++. ++|+ +||+++
T Consensus 142 ~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~l 221 (413)
T 3t18_A 142 CEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITL 221 (413)
T ss_dssp HHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEE
T ss_pred HHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEE
Confidence 9999999999998 45779999999999986 676 8888899 99999998866555 5555 899999
Q ss_pred EEeccccchhhhhhhhcCCCCCCCccCCCCc-----cEEEeCCCCCCC-CCCCcEEEEEe--cccccccchhcccccCCC
Q 013675 307 HVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV-----TSISVDVHKYGL-APKGTSVVLYR--NREIRKHQFVAVTEWSGG 378 (438)
Q Consensus 307 hVD~a~gg~~~pf~~~~g~~~p~~~~~~~gv-----dsis~s~hK~~~-~p~g~g~l~~r--~~~~~~~~~~~~~~~~g~ 378 (438)
++|++|+++... |...+++-....++ .++..+++|.+. .+..+|+++.. ++++.+..........
T Consensus 222 i~De~y~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~-- 294 (413)
T 3t18_A 222 IVDVAYLEFAGD-----GDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSA-- 294 (413)
T ss_dssp EEECTTGGGSSS-----SSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHH--
T ss_pred EEecccccccCC-----hhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhh--
Confidence 999999776531 11011111111111 366679999943 33347888762 4444332111100000
Q ss_pred ccCCCCccCCCCCchHHHHHHHHHHHcHH-------HHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 379 LYVSPTVAGSRPGGLIAGAWAALMSLGQE-------GYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 379 ~~~~~~~~gsr~~~~ia~~~aal~~~g~~-------g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
.+.-......++.++...+... ..++..++..++.+++.+.|+++ |+++
T Consensus 295 -------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~ 350 (413)
T 3t18_A 295 -------RCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLTM 350 (413)
T ss_dssp -------HHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred -------hccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCc
Confidence 0000001122444444333322 33455677788888899998876 5543
No 171
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.77 E-value=5.7e-18 Score=171.25 Aligned_cols=236 Identities=11% Similarity=0.057 Sum_probs=159.9
Q ss_pred chhHHHHHHHHHHHHHHHh-CCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHh
Q 013675 166 FQSVARFEAEVIAMTAALL-GNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQ 244 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~-g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~ 244 (438)
.++..++++.+.+++.+.. +.++++ ...+ ++|+|||+|+.++++++. .+| ++|+++.+.|.++...++
T Consensus 87 ~~g~~~lr~~ia~~~~~~~~~~~~~~-~~~i--~~t~g~~~al~~~~~~l~-----~~g---d~Vl~~~p~y~~~~~~~~ 155 (430)
T 2x5f_A 87 PQGIEELRDLWQQKMLRDNPELSIDN-MSRP--IVTNALTHGLSLVGDLFV-----NQD---DTILLPEHNWGNYKLVFN 155 (430)
T ss_dssp TTCCHHHHHHHHHHHHHHCTTCCGGG-BCCC--EEESHHHHHHHHHHHHHC-----CTT---CEEEEESSCCTHHHHHHT
T ss_pred CCCCHHHHHHHHHHHhccCcccCCCc-cceE--EEcCCchHHHHHHHHHHh-----CCC---CEEEEcCCcCccHHHHHH
Confidence 3455666776666665542 444321 0004 899999999999999875 367 899999999999999999
Q ss_pred h-cCcEEEEeeCCC-CCccCHHHHHHhhcc---CcEEEEEecCCCCCccccC---HHHHHHHHHH-----cCCeEEEecc
Q 013675 245 Y-FNIKLWRVPVDK-EFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDP---IQELGELALS-----HGTCLHVDLC 311 (438)
Q Consensus 245 ~-~Gi~v~~v~~~~-~~~~d~~~Le~~I~~---~t~~vv~~~~~~~tG~idd---i~~I~~la~~-----~~i~lhVD~a 311 (438)
. .|++++.+|+++ ++.+|+++|++++++ +++++++++|+||||.+.| +++|+++|++ +|+++++|++
T Consensus 156 ~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~ 235 (430)
T 2x5f_A 156 TRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDA 235 (430)
T ss_dssp TTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECT
T ss_pred HhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehh
Confidence 9 999999999876 578999999999987 8999999999999999988 8899999999 9999999999
Q ss_pred ccchhhhhhhhcCCCCCCC--ccC-CCCc---cEEEeCCCCCCCCCCC--cEEEEE--ecccccccchhcccc-cCCCcc
Q 013675 312 LGGFVLPFAKKLGYPIPPF--DFS-VQGV---TSISVDVHKYGLAPKG--TSVVLY--RNREIRKHQFVAVTE-WSGGLY 380 (438)
Q Consensus 312 ~gg~~~pf~~~~g~~~p~~--~~~-~~gv---dsis~s~hK~~~~p~g--~g~l~~--r~~~~~~~~~~~~~~-~~g~~~ 380 (438)
|+++... |...+++ ++. ..+. +++..++||++ +++| +|+++. +++++.+........ ....
T Consensus 236 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~-- 307 (430)
T 2x5f_A 236 YYGLFYE-----DVYTQSLFTALTNLHSNAILPIRLDGATKEF-FAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSN-- 307 (430)
T ss_dssp TTTCBCS-----SSCCSCHHHHHHTTCCTTEEEEEEEEHHHHT-TCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTT--
T ss_pred cccccCC-----cccchHHHHHHhhccCCcceEEEEEecccCC-CCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcc--
Confidence 9876431 1001111 221 1334 67788999994 5445 799887 234443321111000 0000
Q ss_pred CCCCccCCCCCchHHHHHHHHHHHc-----HHHHHHHHHHHHHHHHHHHHHhh
Q 013675 381 VSPTVAGSRPGGLIAGAWAALMSLG-----QEGYLENTKAIMEVSESIQKGLV 428 (438)
Q Consensus 381 ~~~~~~gsr~~~~ia~~~aal~~~g-----~~g~~~~~~~~~~~a~~l~~~L~ 428 (438)
.++-+ ..+++++...+. .+.+++..++..++++++.+.|+
T Consensus 308 -----~~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 352 (430)
T 2x5f_A 308 -----ISSGP---LPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVY 352 (430)
T ss_dssp -----TSSCC---HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----cCCCC---hHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111 123333333332 12233477788888999999998
No 172
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.77 E-value=1e-17 Score=169.35 Aligned_cols=171 Identities=16% Similarity=0.082 Sum_probs=131.1
Q ss_pred HHHHHHHHHhCCCCCCCCCccceeEcCChHHHH--HHHHHHHHHHHH-------HhcCCCCCeEEecCCCcCcHHHHHhh
Q 013675 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESI--LLAVKSSRDYMR-------NKRGITRPEMIIPVSAHSAYDKAAQY 245 (438)
Q Consensus 175 ~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~--~~al~a~~~~~~-------~~~G~~~~~Viv~~~~h~s~~~a~~~ 245 (438)
++++.+++++++++++ + ++|+|+++++ .++++++.+... ..+| ++|+++.++|..+...++.
T Consensus 82 ~lr~~ia~~~~~~~~~----i--~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~g---d~V~v~~p~y~~~~~~~~~ 152 (427)
T 3ppl_A 82 DIRQIWADLLGVPVEQ----V--LAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEET---VKWICPVPGYDRHFSITER 152 (427)
T ss_dssp HHHHHHHHHHTSCGGG----E--EECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSC---CEEEEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcce----E--EEeCCcHHHHHHHHHHHHHhccCCcccccccCCCC---CEEEEcCCCcHHHHHHHHH
Confidence 3445677777888776 6 8999999999 477777652000 0015 8999999999999999999
Q ss_pred cCcEEEEeeCCCCCccCHHHHHHhhc-cCcEEEEEe-cCCCCCccccCHH---HHHHHH-HHcCCeEEEeccccchhhhh
Q 013675 246 FNIKLWRVPVDKEFRADVKAIKKYIN-RNTVLIVGS-APGFPHGIIDPIQ---ELGELA-LSHGTCLHVDLCLGGFVLPF 319 (438)
Q Consensus 246 ~Gi~v~~v~~~~~~~~d~~~Le~~I~-~~t~~vv~~-~~~~~tG~iddi~---~I~~la-~~~~i~lhVD~a~gg~~~pf 319 (438)
.|++++.+|+++++ +|+++|+++++ +++++|+++ +++||||.+.|.+ +|+++| +++|+++|+|++|+.+...
T Consensus 153 ~g~~~~~v~~~~~g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~- 230 (427)
T 3ppl_A 153 FGFEMISVPMNEDG-PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLT- 230 (427)
T ss_dssp TTCEEEEEEEETTE-ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSS-
T ss_pred cCCEEEEeCCCCCC-CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccC-
Confidence 99999999998765 99999999995 678888765 8899999998877 888888 9999999999999864321
Q ss_pred hhhcCCCCCCCcc-------CCCCccEEEeCCCCCCCCCCCcEEEEEe
Q 013675 320 AKKLGYPIPPFDF-------SVQGVTSISVDVHKYGLAPKGTSVVLYR 360 (438)
Q Consensus 320 ~~~~g~~~p~~~~-------~~~gvdsis~s~hK~~~~p~g~g~l~~r 360 (438)
..+ .++.+. ...+.+++..+++|++..+.++|+++.+
T Consensus 231 --~~~--~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~ 274 (427)
T 3ppl_A 231 --DEF--PEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTS 274 (427)
T ss_dssp --SCC--CCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECC
T ss_pred --CCC--CCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcC
Confidence 111 111111 1345688899999996667789987665
No 173
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.77 E-value=4.3e-18 Score=171.08 Aligned_cols=245 Identities=11% Similarity=0.079 Sum_probs=158.1
Q ss_pred cccchhHHHHHHHHHHHHHHHhCC--CCCCCCCccceeE--cCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNM--TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~--~~~~~~~~v~g~~--t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s 238 (438)
|...++..++.+.+.+++.+..|. ++++ + ++ |+||++|+.++++.++.. .+| ++|+++.++|++
T Consensus 69 y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~----i--~~~~t~g~~~a~~~~~~~~~~~---~~g---d~Vl~~~p~~~~ 136 (412)
T 1yaa_A 69 YLGITGLPSLTSNAAKIIFGTQSDALQEDR----V--ISVQSLSGTGALHISAKFFSKF---FPD---KLVYLSKPTWAN 136 (412)
T ss_dssp CCCTTCCHHHHHHHHHHHHCTTCHHHHTTC----E--EEEEEEHHHHHHHHHHHHHHHH---CTT---CCEEEEESCCTT
T ss_pred CCCCCCcHHHHHHHHHHHhcCCCCCCCcce----E--EEEeccchHhHHHHHHHHHHHh---CCC---CEEEEeCCCCcc
Confidence 434455666666666665444342 3444 6 78 999999999986554321 256 899999999999
Q ss_pred HHHHHhhcCcEEEEeeC-CC-CCccCHHHHHHhhccC---cEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEec
Q 013675 239 YDKAAQYFNIKLWRVPV-DK-EFRADVKAIKKYINRN---TVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDL 310 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v~~-~~-~~~~d~~~Le~~I~~~---t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~ 310 (438)
+...++..|++++.+|+ ++ ++.+|+++|+++++++ +.++++++|+||||.+.+ +++|+++|++||+++++|+
T Consensus 137 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De 216 (412)
T 1yaa_A 137 HMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDT 216 (412)
T ss_dssp HHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 99999999999999998 54 7889999999999764 566666999999999966 6688999999999999999
Q ss_pred cccchhhhhhhhcCCCCCCCccCCCC--ccEEEeCCCCCCCCCCC--cEEEE--E----eccc----ccccchh-ccccc
Q 013675 311 CLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKG--TSVVL--Y----RNRE----IRKHQFV-AVTEW 375 (438)
Q Consensus 311 a~gg~~~pf~~~~g~~~p~~~~~~~g--vdsis~s~hK~~~~p~g--~g~l~--~----r~~~----~~~~~~~-~~~~~ 375 (438)
+|+++...-......++..++..... .+++..+++|. ++|.| +|+++ . ++++ +...... ....|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 295 (412)
T 1yaa_A 217 AYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKN-AGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEV 295 (412)
T ss_dssp SCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTT-SCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTT
T ss_pred ccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCC-CCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhcc
Confidence 99765321000000000001101111 35778889998 57766 68876 4 1443 3221111 00011
Q ss_pred CCCccCCCCccCCCCCchHHHHHHHHHHHc-----HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013675 376 SGGLYVSPTVAGSRPGGLIAGAWAALMSLG-----QEGYLENTKAIMEVSESIQKGLVLFP 431 (438)
Q Consensus 376 ~g~~~~~~~~~gsr~~~~ia~~~aal~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~ 431 (438)
. +-+....+++..++.... .+++++..++..++++++.+.|++++
T Consensus 296 ~-----------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1yaa_A 296 S-----------NPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLG 345 (412)
T ss_dssp S-----------SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred C-----------CCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 0 001111222333333221 24677888888999999999998764
No 174
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.76 E-value=3.3e-17 Score=162.23 Aligned_cols=219 Identities=15% Similarity=0.119 Sum_probs=144.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHH-hcCCCCCeEEecCCCcCcHHHHHhhcCc---
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRN-KRGITRPEMIIPVSAHSAYDKAAQYFNI--- 248 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~-~~G~~~~~Viv~~~~h~s~~~a~~~~Gi--- 248 (438)
..++++++++++|.+ ++ + ++|+|||+|+.+++++++..... .+| +++|+++.++|..+...+...+.
T Consensus 72 ~~~l~~~la~~~g~~-~~----v--~~~~g~t~a~~~~~~~~~~~~~~~~~g--~~~vl~~~~~y~~~~~~~~~~~~~~~ 142 (375)
T 2eh6_A 72 QEELAHKLVKHFWTE-GK----V--FFANSGTESVEAAIKLARKYWRDKGKN--KWKFISFENSFHGRTYGSLSATGQPK 142 (375)
T ss_dssp HHHHHHHHHHTSSSC-EE----E--EEESSHHHHHHHHHHHHHHHHHHTTCC--CCEEEEEBTCCCCSSHHHHHHCBCGG
T ss_pred HHHHHHHHHhhcCCC-Ce----E--EEeCchHHHHHHHHHHHHHHhccCCCC--CCEEEEECCCcCCCchhhhhhcCCcc
Confidence 345667899999984 43 5 89999999999999875432210 123 37899999886665444433321
Q ss_pred -----E-----EEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccC----HHHHHHHHHHcCCeEEEeccccc
Q 013675 249 -----K-----LWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLGG 314 (438)
Q Consensus 249 -----~-----v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd----i~~I~~la~~~~i~lhVD~a~gg 314 (438)
. +..+|. .|+++|++++++++++|++++++||||.+.| +++|.++|++||+++|+|++|++
T Consensus 143 ~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 217 (375)
T 2eh6_A 143 FHKGFEPLVPGFSYAKL-----NDIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTG 217 (375)
T ss_dssp GTTTTCSCCSSEEEECT-----TCHHHHHTTCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred ccCCCCCCCCCceeCCC-----chHHHHHHHhcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccC
Confidence 1 334432 4899999999999999999999999999987 99999999999999999999986
Q ss_pred hhhhhhhhcCCCCCCCccCCCC--ccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCc
Q 013675 315 FVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG 392 (438)
Q Consensus 315 ~~~pf~~~~g~~~p~~~~~~~g--vdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~ 392 (438)
+... +. .++....+ .|++++| |++.+|.++|+++.+++ +.+.... ...+. +. +. +..
T Consensus 218 ~~~~-----~~---~~~~~~~~~~~d~~s~S--K~~~~g~~~G~~~~~~~-~~~~~~~---~~~~~-----~~-~~-~~~ 276 (375)
T 2eh6_A 218 IGRT-----GE---FYAYQHFNLKPDVIALA--KGLGGGVPIGAILAREE-VAQSFTP---GSHGS-----TF-GG-NPL 276 (375)
T ss_dssp TTTT-----SS---SSGGGGGTCCCSEEEEC--GGGGTTSCCEEEEEEHH-HHTTCCT---TSCCC-----SS-TT-CHH
T ss_pred CCCC-----Cc---chhhhhcCCCCCEEEEc--ccccCCCCeEEEEEcHH-HHhhhcC---CCCCC-----CC-CC-CHH
Confidence 4321 10 12223334 6888777 77567788999888753 3221100 00011 01 11 111
Q ss_pred hHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013675 393 LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFP 431 (438)
Q Consensus 393 ~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~ 431 (438)
..+++.++++.+ .+..++..++++++.+.|++++
T Consensus 277 ~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~ 310 (375)
T 2eh6_A 277 ACRAGTVVVDEV-----EKLLPHVREVGNYFKEKLKELG 310 (375)
T ss_dssp HHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHh
Confidence 112223334332 2677888889999999998764
No 175
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.76 E-value=1.3e-17 Score=166.26 Aligned_cols=240 Identities=12% Similarity=0.092 Sum_probs=158.1
Q ss_pred cccchhHHHHHHHHHHHHHHHhC--CCCCCCCCccceeE--cCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc
Q 013675 163 LDIFQSVARFEAEVIAMTAALLG--NKEKASGGQVCGNM--TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA 238 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g--~~~~~~~~~v~g~~--t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s 238 (438)
|...++..++++.+.+++.+..+ .++++ + ++ |+|||+|+.+++++++.. .+| ++|+++.++|+.
T Consensus 65 y~~~~g~~~lr~~la~~~~~~~~~~~~~~~----v--~~~~~~g~~~a~~~~~~~~~~~---~~g---d~Vl~~~p~y~~ 132 (396)
T 2q7w_A 65 YLGIDGIPEFGRCTQELLFGKGSALINDKR----A--RTAQTPGGTGALRVAADFLAKN---TSV---KRVWVSNPSWPN 132 (396)
T ss_dssp CCCTTCCHHHHHHHHHHHHCTTCHHHHTTC----E--EEEEESHHHHHHHHHHHHHHHH---SCC---CEEEEEESCCTH
T ss_pred CCCCCCCHHHHHHHHHHHhcCCCCcccccc----E--EEEecccchhhHHHHHHHHHHh---CCC---CEEEEcCCCchh
Confidence 43345555666655555432212 12444 5 66 999999999999876531 266 899999999999
Q ss_pred HHHHHhhcCcEEEEeeCC--CCCccCHHHHHHhhcc---CcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEec
Q 013675 239 YDKAAQYFNIKLWRVPVD--KEFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDL 310 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v~~~--~~~~~d~~~Le~~I~~---~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~ 310 (438)
+...++..|.+++.+|.+ +++.+|++++++++++ +++++++++|+||||.+.+ +++|+++|++||+++++|+
T Consensus 133 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De 212 (396)
T 2q7w_A 133 HKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDF 212 (396)
T ss_dssp HHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 999999999999999985 5788999999999975 4788999999999999876 5689999999999999999
Q ss_pred cccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCC--cEEEEE--eccc----ccccchh-cccccCCCccC
Q 013675 311 CLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLY--RNRE----IRKHQFV-AVTEWSGGLYV 381 (438)
Q Consensus 311 a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g--~g~l~~--r~~~----~~~~~~~-~~~~~~g~~~~ 381 (438)
+|+++...- ...+..+..++. ....++++.+++|. +++.| +|+++. .+++ +...... ....|.
T Consensus 213 ~~~~~~~~~-~~~~~~~~~~~~-~~~~~i~~~s~sK~-~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 284 (396)
T 2q7w_A 213 AYQGFARGL-EEDAEGLRAFAA-MHKELIVASSYSXN-FGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYS----- 284 (396)
T ss_dssp SCTTSSSCH-HHHTHHHHHHHH-HCSCEEEEEECTTT-TTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTS-----
T ss_pred ccccccCCc-cchhHHHHHHHh-cCCcEEEEEecccc-ccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccC-----
Confidence 998754300 000000000111 11235778899998 56556 698876 2332 2211100 000110
Q ss_pred CCCccCCCCCchHHHHHHHHHHHc--------HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013675 382 SPTVAGSRPGGLIAGAWAALMSLG--------QEGYLENTKAIMEVSESIQKGLVLFP 431 (438)
Q Consensus 382 ~~~~~gsr~~~~ia~~~aal~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~~ 431 (438)
+....++.++...+. .+.+++..++..++++++.+.|+++.
T Consensus 285 ---------~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 333 (396)
T 2q7w_A 285 ---------NPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG 333 (396)
T ss_dssp ---------SCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTT
T ss_pred ---------CCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 001223333333332 24667778888899999999998874
No 176
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.76 E-value=5.5e-18 Score=170.18 Aligned_cols=245 Identities=11% Similarity=0.051 Sum_probs=158.9
Q ss_pred cccchhHHHHHHHHHHHHHHHhCC--CCCCCCCccceeE--cCChHHHHHHHHHHHHHHHHHhcC--CCCCeEEecCCCc
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGN--KEKASGGQVCGNM--TSGGTESILLAVKSSRDYMRNKRG--ITRPEMIIPVSAH 236 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~--~~~~~~~~v~g~~--t~ggt~a~~~al~a~~~~~~~~~G--~~~~~Viv~~~~h 236 (438)
|...++..++++.+.+++....|. ++++ + ++ |+||++|+.++++.++.. .+| ...++|+++.++|
T Consensus 70 y~~~~g~~~lr~~la~~~~~~~~~~~~~~~----v--~~~~t~gg~~a~~~~~~~~~~~---~~g~~~~~d~Vl~~~p~y 140 (412)
T 1ajs_A 70 YLPILGLAEFRTCASRLALGDDSPALQEKR----V--GGVQSLGGTGALRIGAEFLARW---YNGTNNKDTPVYVSSPTW 140 (412)
T ss_dssp CCCTTCCHHHHHHHHHHHHCTTCHHHHTTC----E--EEEEEEHHHHHHHHHHHHHHHH---SSSSSCCCSCEEEEESCC
T ss_pred CCCCCCCHHHHHHHHHHHhcCCCCccCCCc----E--EEEECCCcHHHHHHHHHHHHHh---CcCcCCCCCeEEEcCCCc
Confidence 433455555555544444332222 3444 6 88 999999999997654421 123 1116899999999
Q ss_pred CcHHHHHhhcCcE-EEEeeCC--CCCccCHHHHHHhhcc---CcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEE
Q 013675 237 SAYDKAAQYFNIK-LWRVPVD--KEFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLH 307 (438)
Q Consensus 237 ~s~~~a~~~~Gi~-v~~v~~~--~~~~~d~~~Le~~I~~---~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lh 307 (438)
+++...++..|++ ++.+|++ .++.+|++++++++++ +++++++++|+||||.+.+ +++|+++|++||++++
T Consensus 141 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li 220 (412)
T 1ajs_A 141 ENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPF 220 (412)
T ss_dssp THHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 9999999999999 9999984 4788999999999975 6888889999999999965 6689999999999999
Q ss_pred EeccccchhhhhhhhcCCCCCCCc-cC-CCCccEEEeCCCCCCCCCCC--cEEEEEe--ccccccc---chh--cccccC
Q 013675 308 VDLCLGGFVLPFAKKLGYPIPPFD-FS-VQGVTSISVDVHKYGLAPKG--TSVVLYR--NREIRKH---QFV--AVTEWS 376 (438)
Q Consensus 308 VD~a~gg~~~pf~~~~g~~~p~~~-~~-~~gvdsis~s~hK~~~~p~g--~g~l~~r--~~~~~~~---~~~--~~~~~~ 376 (438)
+|++|.++...-.... .+++. +. ...-+++..+++|. +++.| +|+++.. +++..+. ... ....|.
T Consensus 221 ~De~y~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (412)
T 1ajs_A 221 FDSAYQGFASGNLEKD---AWAIRYFVSEGFELFCAQSFSKN-FGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWS 296 (412)
T ss_dssp EEESCTTTTTSCHHHH---THHHHHHHHTTCCEEEEEECTTT-SCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTS
T ss_pred EEcccccccCCccccc---chHHHHHhccCCcEEEEEecccc-cCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccC
Confidence 9999877643100000 00011 11 11234788899998 56666 7988872 4432111 010 001111
Q ss_pred CCccCCCCccCCCCCchHHHHHHHHHHHc-----HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013675 377 GGLYVSPTVAGSRPGGLIAGAWAALMSLG-----QEGYLENTKAIMEVSESIQKGLVLFP 431 (438)
Q Consensus 377 g~~~~~~~~~gsr~~~~ia~~~aal~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~ 431 (438)
+ -+....+++.+++.... .+.+++..++..++++++.+.|++++
T Consensus 297 ~-----------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1ajs_A 297 N-----------PPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALK 345 (412)
T ss_dssp S-----------CCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred C-----------CChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 0 01111223333443221 34677888889999999999998874
No 177
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.76 E-value=2e-17 Score=168.90 Aligned_cols=236 Identities=17% Similarity=0.122 Sum_probs=146.1
Q ss_pred HHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCe---EEecCCCc-CcHHHHHhhcCcEE
Q 013675 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPE---MIIPVSAH-SAYDKAAQYFNIKL 250 (438)
Q Consensus 175 ~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~---Viv~~~~h-~s~~~a~~~~Gi~v 250 (438)
++++++++++|.+ + + ++|+|||+|+.+++++++++.. .+| ++ |+++ ..| ..+..++...|.++
T Consensus 80 ~l~~~la~~~~~~--~----v--~~t~ggt~A~~~al~~~~~~~~-~~G---d~~~~viv~-~~~~~~~~~~~~~~g~~~ 146 (467)
T 1ax4_A 80 DLKDKAKELFNYD--Y----I--IPAHQGRGAENILFPVLLKYKQ-KEG---KAKNPVFIS-NFHFDTTAAHVELNGCKA 146 (467)
T ss_dssp HHHHHHHHHHCCC--E----E--EEESSHHHHHHHHHHHHHHHHH-HTT---CCSSCEEEE-SSCCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCC--c----E--EEcCCcHHHHHHHHHHHHHhhc-cCC---CccceEEEe-ccccchhhHHHhccCCce
Confidence 4455688888763 2 4 8999999999999999875321 256 67 8888 555 55677888889998
Q ss_pred EEeeCCC----------CCccCHHHHHHhhcc----CcEEEEEecCCCCC-cccc---CHHHHHHHHHHcCCeEEEeccc
Q 013675 251 WRVPVDK----------EFRADVKAIKKYINR----NTVLIVGSAPGFPH-GIID---PIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 251 ~~v~~~~----------~~~~d~~~Le~~I~~----~t~~vv~~~~~~~t-G~id---di~~I~~la~~~~i~lhVD~a~ 312 (438)
+.++.+. ++.+|+++|+++|++ +|++|++++++||+ |.+. ++++|+++|++||+++|+|+++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~ 226 (467)
T 1ax4_A 147 INIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSAR 226 (467)
T ss_dssp EECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred ecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchh
Confidence 8776431 467999999999984 68999999999999 7764 4789999999999999999986
Q ss_pred cc-hhhhhh-----hhcCCCCCCCc-cCCCCccEEEeCCCCCCCCCCCcEEEEEecc-cccccchhcccccCCCccCCCC
Q 013675 313 GG-FVLPFA-----KKLGYPIPPFD-FSVQGVTSISVDVHKYGLAPKGTSVVLYRNR-EIRKHQFVAVTEWSGGLYVSPT 384 (438)
Q Consensus 313 gg-~~~pf~-----~~~g~~~p~~~-~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~-~~~~~~~~~~~~~~g~~~~~~~ 384 (438)
+. ... |. ...+.+++.+. .....+|++++++||++..|.| |+++.+++ ++..........+ ++. .
T Consensus 227 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~-~~~----~ 299 (467)
T 1ax4_A 227 FCENAY-FIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPM-EGF----V 299 (467)
T ss_dssp HHHHHH-HHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHH-TCS----T
T ss_pred hhhcch-hccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhcccc-ccc----c
Confidence 43 111 00 00111000000 0002368899999999655545 66656645 5543221111112 111 1
Q ss_pred ccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 385 VAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 385 ~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
..|..+...++++..++...-. .+..++..++++++.+.|++ ++++
T Consensus 300 ~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~ 345 (467)
T 1ax4_A 300 TYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLRE-AGIP 345 (467)
T ss_dssp TTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHH-TTCC
T ss_pred ccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHh-CCCC
Confidence 1122222223333334433211 12344445677888888876 4554
No 178
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.75 E-value=2.4e-17 Score=165.97 Aligned_cols=260 Identities=11% Similarity=0.056 Sum_probs=164.6
Q ss_pred HHHHHHHHhhccCCCCcccchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCC
Q 013675 147 LINEACSMFAHTNPLHLDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITR 226 (438)
Q Consensus 147 ~~~~~~~~~~~~n~~~~~~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~ 226 (438)
.+.+++..........|...++..++++++.+++.+..+.+... ++ ++|+||++|+..+++++. .+|
T Consensus 60 ~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~---~i--~~t~g~~~al~~~~~~l~-----~~g--- 126 (418)
T 3rq1_A 60 TVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHI---RS--IATAGGTGGIHHLIHNYT-----EPG--- 126 (418)
T ss_dssp HHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEE---EE--EEESHHHHHHHHHHHHHS-----CTT---
T ss_pred HHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccccc---cE--EECCchHHHHHHHHHHhc-----CCC---
Confidence 34444444322222334445566777887777776666543221 15 899999999999999875 367
Q ss_pred CeEEecCCCcCcHHHHHhhcCcEEEEeeCC-CCCccCHHHHHHhhcc----CcE-EEEEecC-CCCCccccCHHHH---H
Q 013675 227 PEMIIPVSAHSAYDKAAQYFNIKLWRVPVD-KEFRADVKAIKKYINR----NTV-LIVGSAP-GFPHGIIDPIQEL---G 296 (438)
Q Consensus 227 ~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~-~~~~~d~~~Le~~I~~----~t~-~vv~~~~-~~~tG~iddi~~I---~ 296 (438)
++|+++.+.|..+...++..|.+++.+|++ +++.+|+++|++++++ +++ ++++++| +||||.+.|.+++ +
T Consensus 127 d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~ 206 (418)
T 3rq1_A 127 DEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSIL 206 (418)
T ss_dssp CEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred CEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHH
Confidence 899999999999999999999999999995 4679999999999985 665 8888999 9999999886554 4
Q ss_pred HHHH------HcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCCc-----cEEEeCCCCCCC-CCCCcEEEEE--ecc
Q 013675 297 ELAL------SHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV-----TSISVDVHKYGL-APKGTSVVLY--RNR 362 (438)
Q Consensus 297 ~la~------~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gv-----dsis~s~hK~~~-~p~g~g~l~~--r~~ 362 (438)
++|+ +||+++++|++|.++... ... .+++-....++ .+++.+++|.+. .+..+|+++. +++
T Consensus 207 ~~~~~~~~~~~~~~~li~De~y~~~~~~--~~~---~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~ 281 (418)
T 3rq1_A 207 NFLKDLVAIGRNNVIIGIDVAYLDYSGE--KDE---VRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDE 281 (418)
T ss_dssp HHHHHHHHTSSCEEEEEEECTTGGGSSC--HHH---HHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSH
T ss_pred HHHHHhhhccCCCeEEEEecccccccCC--hHH---HHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCH
Confidence 5555 899999999999766531 000 00010011111 367779999843 3345788776 245
Q ss_pred cccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcH--------HHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 363 EIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQ--------EGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 363 ~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~--------~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
++............. +........++.++...+.. +..++..++..++++++.+.|+++ |++
T Consensus 282 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 351 (418)
T 3rq1_A 282 EIADEFFEVNKSTSR---------ATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLP 351 (418)
T ss_dssp HHHHHHHHHHHHHHH---------HHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred HHHHHHHHHHHHHHh---------hccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 444321111000000 00000112234444433322 123355567778888888888775 544
No 179
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.75 E-value=1.9e-17 Score=166.91 Aligned_cols=175 Identities=17% Similarity=0.098 Sum_probs=131.3
Q ss_pred HHHHHHHHHhCCCCCCCCCccceeEcCChHHHHH--HHHHHHHHHHHHhcCCC------CCeEEecCCCcCcHHHHHhhc
Q 013675 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESIL--LAVKSSRDYMRNKRGIT------RPEMIIPVSAHSAYDKAAQYF 246 (438)
Q Consensus 175 ~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~--~al~a~~~~~~~~~G~~------~~~Viv~~~~h~s~~~a~~~~ 246 (438)
++++.++++++.++++ + ++|+|+++++. ++++++... .+|-. .++|+++.++|..+...++..
T Consensus 74 ~lr~~ia~~~~~~~~~----i--~~t~G~~~al~~~~~~~~l~~~---~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~ 144 (423)
T 3ez1_A 74 SARALFAGYLDVKAEN----V--LVWNNSSLELQGLVLTFALLHG---VRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTL 144 (423)
T ss_dssp HHHHHHHHHTTSCGGG----E--EECSSCHHHHHHHHHHHHHHTC---CTTCSSCGGGGCCEEEEEESCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChhh----E--EEeCCcHHHHHHHHHHHHHhcc---CCCccccccCCCCEEEEcCCCcHHHHHHHHHc
Confidence 4455677888888765 6 99999999998 788776520 02100 289999999999999999999
Q ss_pred CcEEEEeeCCCCCccCHHHHHHhh--ccCcEEEEEe-cCCCCCccccCHH---HHHHHH-HHcCCeEEEeccccchhhhh
Q 013675 247 NIKLWRVPVDKEFRADVKAIKKYI--NRNTVLIVGS-APGFPHGIIDPIQ---ELGELA-LSHGTCLHVDLCLGGFVLPF 319 (438)
Q Consensus 247 Gi~v~~v~~~~~~~~d~~~Le~~I--~~~t~~vv~~-~~~~~tG~iddi~---~I~~la-~~~~i~lhVD~a~gg~~~pf 319 (438)
|++++.+|+++++ +|+++|++++ +++|++|+++ +++||||.+.|.+ +|+++| +++|+++++|++|+.+...
T Consensus 145 g~~~~~v~~~~~g-~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~- 222 (423)
T 3ez1_A 145 GFELLTVDMQSDG-PDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLV- 222 (423)
T ss_dssp TCEEEEEEEETTE-ECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCC-
T ss_pred CCEEEeccCCCCC-CCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcC-
Confidence 9999999998764 9999999999 5788888654 8999999998876 888888 8999999999999743221
Q ss_pred hhhcCCCCCC-Ccc----CCCCccEEEeCCCCCCCCCCCcEEEEEec
Q 013675 320 AKKLGYPIPP-FDF----SVQGVTSISVDVHKYGLAPKGTSVVLYRN 361 (438)
Q Consensus 320 ~~~~g~~~p~-~~~----~~~gvdsis~s~hK~~~~p~g~g~l~~r~ 361 (438)
..-+...++ +.. ...+.+++..+++|+++++.++|+++.++
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~ 268 (423)
T 3ez1_A 223 -EEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE 268 (423)
T ss_dssp -SSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH
T ss_pred -CCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH
Confidence 000000001 111 23456788999999877778899877764
No 180
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.75 E-value=1.2e-17 Score=169.54 Aligned_cols=179 Identities=16% Similarity=0.183 Sum_probs=135.4
Q ss_pred CcccchhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCC------------
Q 013675 162 HLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRP------------ 227 (438)
Q Consensus 162 ~~~~~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~------------ 227 (438)
.+...++..++++++.+++.+.+|.+ +++ + ++|+|+|+|+.++++++.. +| +
T Consensus 78 ~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~----i--~~t~G~t~al~~~~~~l~~-----~g---d~~~~~~~~~~g~ 143 (444)
T 3if2_A 78 NYSNPQGDSAFIDALVGFFNRHYDWNLTSEN----I--ALTNGSQNAFFYLFNLFGG-----AF---VNEHSQDKESKSV 143 (444)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCCGGG----E--EEESSHHHHHHHHHHHSSE-----EE---ECC-------CEE
T ss_pred ccCCCCCCHHHHHHHHHHHHhhcCCCCCHHH----E--EEecCcHHHHHHHHHHHhC-----CC---ccccccccccccc
Confidence 34445566788888888888877754 444 6 9999999999999998752 45 4
Q ss_pred --eEEec-CCCcCcHHHHH------hhcCcEEEEeeCCC-C----CccCHHHHHHh---hccCcEEEEEecCCCCCcccc
Q 013675 228 --EMIIP-VSAHSAYDKAA------QYFNIKLWRVPVDK-E----FRADVKAIKKY---INRNTVLIVGSAPGFPHGIID 290 (438)
Q Consensus 228 --~Viv~-~~~h~s~~~a~------~~~Gi~v~~v~~~~-~----~~~d~~~Le~~---I~~~t~~vv~~~~~~~tG~id 290 (438)
+|+++ .++|..+..++ ...|.+++.+|+++ + +.+|+++|+++ ++++|++|++++|+||||.+.
T Consensus 144 ~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~ 223 (444)
T 3if2_A 144 DKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVL 223 (444)
T ss_dssp EEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCC
T ss_pred cceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcC
Confidence 68776 77888776643 34577888888875 3 47999999998 778899999999999999999
Q ss_pred C---HHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEe
Q 013675 291 P---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYR 360 (438)
Q Consensus 291 d---i~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r 360 (438)
| +++|+++|++||+++|+|++|+.+... ..+ . .......+.++++.++||++..+.++|+++.+
T Consensus 224 ~~~~l~~i~~~a~~~~~~li~De~~~~~~~~----~~~-~-~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~ 290 (444)
T 3if2_A 224 TDEEMAHLAEIAKRYDIPLIIDNAYGMPFPN----IIY-S-DAHLNWDNNTILCFSLSKIGLPGMRTGIIVAD 290 (444)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECTTCTTTTC----CBC-S-CCCCCCCTTEEEEEESTTTTCGGGCCEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCCCCcccc----ccc-c-cccccCCCCEEEEechhhccCCCCceEEEEEC
Confidence 8 888999999999999999999753211 100 0 11112346789999999986666778886654
No 181
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.75 E-value=7.8e-17 Score=160.82 Aligned_cols=222 Identities=16% Similarity=0.110 Sum_probs=150.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCc-CcHHHHHhhcCcE
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAH-SAYDKAAQYFNIK 249 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h-~s~~~a~~~~Gi~ 249 (438)
+...++++.+++++|.+.++ + ++|+|||+|+.+++++++.. .+| ++|+++.+.| .....++...|.+
T Consensus 87 ~~~~~l~~~la~~~~~~~~~----v--~~~~gg~~a~~~al~~~~~~---~~~---~~vi~~~~~y~~~~~~~~~~~g~~ 154 (395)
T 1vef_A 87 PMRGEFYRTLTAILPPELNR----V--FPVNSGTEANEAALKFARAH---TGR---KKFVAAMRGFSGRTMGSLSVTWEP 154 (395)
T ss_dssp HHHHHHHHHHHHTSCTTEEE----E--EEESSHHHHHHHHHHHHHHH---HSC---CEEEEETTCCCCSSHHHHHTCCCH
T ss_pred HHHHHHHHHHHHhcCCCcCE----E--EEcCcHHHHHHHHHHHHHHH---hCC---CeEEEEcCCcCCCchhhhhhcCCc
Confidence 35567778899999876554 5 89999999999999987532 145 7788877765 4566677777765
Q ss_pred ------------EEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccC----HHHHHHHHHHcCCeEEEecccc
Q 013675 250 ------------LWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 250 ------------v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd----i~~I~~la~~~~i~lhVD~a~g 313 (438)
+..++. .|+++|+++++++|++|+++++++|||.+.| +++|+++|++||+++|+|++|+
T Consensus 155 ~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~ 229 (395)
T 1vef_A 155 KYREPFLPLVEPVEFIPY-----NDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT 229 (395)
T ss_dssp HHHGGGCSCSSCEEEECT-----TCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred ccccccCCCCCCeeEeCC-----CcHHHHHHHhccCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 333332 4899999999989999998888889999877 9999999999999999999998
Q ss_pred chhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCch
Q 013675 314 GFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGL 393 (438)
Q Consensus 314 g~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ 393 (438)
++.. .|... .++....+.|++++ ||++.+|.++|+++.+++ +.+.. . ..+.+. +. +.+...
T Consensus 230 ~~~~-----~g~~~-~~~~~~~~~d~~s~--sK~~~~g~~~G~~~~~~~-~~~~l-~--~~~~~~-----~~--~~~~~~ 290 (395)
T 1vef_A 230 GMGR-----TGKRF-AFEHFGIVPDILTL--AKALGGGVPLGVAVMREE-VARSM-P--KGGHGT-----TF--GGNPLA 290 (395)
T ss_dssp TTTT-----TSSSS-THHHHTCCCSEEEE--CGGGGTTSSCEEEEEEHH-HHHTS-C--TTSSCC-----SS--TTCHHH
T ss_pred CCcc-----CCchh-HhhhcCCCCCEEEE--cccccCCCceEEEEehHH-HHhhh-c--cCCcCC-----Cc--CCCHHH
Confidence 6432 11100 11222234677754 899777788999888764 32211 1 001110 00 111112
Q ss_pred HHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013675 394 IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFP 431 (438)
Q Consensus 394 ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~ 431 (438)
.+++.++++.+.. .+..++..++++++.+.|++++
T Consensus 291 ~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~ 325 (395)
T 1vef_A 291 MAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIP 325 (395)
T ss_dssp HHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhh
Confidence 3345555655432 3567788889999999998764
No 182
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.75 E-value=3.4e-17 Score=162.87 Aligned_cols=158 Identities=15% Similarity=0.122 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHhCCCC-CCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcC---cHHHHHhhc
Q 013675 171 RFEAEVIAMTAALLGNKE-KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS---AYDKAAQYF 246 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~-~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~---s~~~a~~~~ 246 (438)
.+++++.+.+++++|.++ ++ + ++|+|||+|+.++++++ +| ++|+++.+.|+ ++...++..
T Consensus 58 ~~~~~~~~~~a~~~g~~~~~~----~--~~~~ggt~a~~~~~~~~-------~g---d~Vl~~~~~y~~~~~~~~~~~~~ 121 (374)
T 2aeu_A 58 YFAEKVNEYGLKHLGGDENDK----C--VGFNRTSSAILATILAL-------KP---KKVIHYLPELPGHPSIERSCKIV 121 (374)
T ss_dssp HHHHHHHHHHHHHHTCCTTEE----E--EEESSHHHHHHHHHHHH-------CC---SEEEEECSSSSCCTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCcce----E--EEEcChHHHHHHHHHhC-------CC---CEEEEecCCCCccHHHHHHHHHc
Confidence 455677788889999842 33 4 89999999999999875 56 89999999544 444477888
Q ss_pred CcEEEEeeCCCCCccCHHHHHHhhccCcEE-EEEecCCCCCc-cccCHHHHHHHHHHcCCeEEEeccccchhh-hhhhhc
Q 013675 247 NIKLWRVPVDKEFRADVKAIKKYINRNTVL-IVGSAPGFPHG-IIDPIQELGELALSHGTCLHVDLCLGGFVL-PFAKKL 323 (438)
Q Consensus 247 Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~-vv~~~~~~~tG-~iddi~~I~~la~~~~i~lhVD~a~gg~~~-pf~~~~ 323 (438)
|++++.+ .|+++++++ +++|++ |++++|+||+| ...|+++|.++|++||+++|+|++++.+.. |..
T Consensus 122 g~~~~~v-------~d~~~l~~~-~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~--- 190 (374)
T 2aeu_A 122 NAKYFES-------DKVGEILNK-IDKDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFN--- 190 (374)
T ss_dssp TCEEEEE-------SCHHHHHTT-CCTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTT---
T ss_pred CcEEEEe-------CCHHHHHhc-CCCccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccc---
Confidence 9999888 389999999 888999 99999999999 889999999999999999999999976642 110
Q ss_pred CCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEec
Q 013675 324 GYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRN 361 (438)
Q Consensus 324 g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~ 361 (438)
. . .....++|+++.++||++.+ .++|+++.++
T Consensus 191 ---~-~-~~~~~~~di~~~S~sK~l~g-~~~G~~~~~~ 222 (374)
T 2aeu_A 191 ---Q-P-PALKLGADLVVTSTDKLMEG-PRGGLLAGKK 222 (374)
T ss_dssp ---C-C-CHHHHTCSEEEEETTSSSSS-CSCEEEEEEH
T ss_pred ---c-C-CccccCCcEEEecCcccccC-cceEEEEECH
Confidence 0 0 01113579999999999544 5889877764
No 183
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.75 E-value=1.2e-16 Score=162.40 Aligned_cols=251 Identities=13% Similarity=0.085 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHhhc-cCCCCcccchhHHHHHHHHHHHHHHHhC--CCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHH
Q 013675 144 HFSLINEACSMFAH-TNPLHLDIFQSVARFEAEVIAMTAALLG--NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRN 220 (438)
Q Consensus 144 ~~~~~~~~~~~~~~-~n~~~~~~~~~~~~~e~~~~~~~a~l~g--~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~ 220 (438)
+.+.+.+.+..... .....|...++..++++++.+++. .| .++++ + ++|+|+++++..+ .++.
T Consensus 87 v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~----i--~~t~G~~~al~~~-~~l~----- 152 (449)
T 3qgu_A 87 IADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADE----I--FISDGSKCDIARI-QMMF----- 152 (449)
T ss_dssp HHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGG----E--EEESCHHHHHHHH-HHHH-----
T ss_pred HHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHH----E--EEccCHHHHHHHH-HHHh-----
Confidence 34444454443322 122233333455666666555554 33 44444 6 8999999999987 5554
Q ss_pred hcCCCCCeEEecCCCcCcHHHHHhhcCcE----------EEEeeCCC--CCccCHHHHHHhhccCcEEEEEecCCCCCcc
Q 013675 221 KRGITRPEMIIPVSAHSAYDKAAQYFNIK----------LWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGI 288 (438)
Q Consensus 221 ~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~----------v~~v~~~~--~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~ 288 (438)
.+| ++|+++.+.|.++...++..|.+ ++.+|+++ ++..|++++ +++++|++++|+||||.
T Consensus 153 ~~g---d~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~ 224 (449)
T 3qgu_A 153 GSK---PTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGA 224 (449)
T ss_dssp CSS---SCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----CCCSEEEEESSCTTTCC
T ss_pred CCC---CEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-----CCCCEEEEeCCCCCCCC
Confidence 367 89999999999999999999998 99999975 344555432 57899999999999999
Q ss_pred ccC---HHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCC-ccC-CCCccEEEeCCCCCCC-CCCCcEEEEEecc
Q 013675 289 IDP---IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPF-DFS-VQGVTSISVDVHKYGL-APKGTSVVLYRNR 362 (438)
Q Consensus 289 idd---i~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~-~~~-~~gvdsis~s~hK~~~-~p~g~g~l~~r~~ 362 (438)
+.+ +++|+++|++||+++++|++|+++... |.....+ .+. ..+++++..+++|.+. .+.++|+++.+++
T Consensus 225 ~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 299 (449)
T 3qgu_A 225 AATRAQLTELVNFARKNGSILVYDAAYALYISN-----PDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKA 299 (449)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCC-----TTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTT
T ss_pred cCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcC-----CCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHH
Confidence 976 778888999999999999999876531 1000011 111 1356788999999953 4456899877654
Q ss_pred ccccc------chhcccccCCCccCCCCccCCCCCchHHHHHHHHHHH---cHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 013675 363 EIRKH------QFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSL---GQEGYLENTKAIMEVSESIQKGLVLFPMF 433 (438)
Q Consensus 363 ~~~~~------~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~g~ 433 (438)
..... .+..... +.-.+....++.++...+ +.+.+++..++..++++++.+.|+++ |+
T Consensus 300 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 366 (449)
T 3qgu_A 300 LKYANGEPVHADWNRVMT------------TCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GF 366 (449)
T ss_dssp CBCTTSCBHHHHHHHHHH------------HSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHhhhhhhHHHHHHHHhh------------cccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 32210 1000000 000011122444444444 33567788889999999999999886 55
Q ss_pred c
Q 013675 434 L 434 (438)
Q Consensus 434 ~ 434 (438)
+
T Consensus 367 ~ 367 (449)
T 3qgu_A 367 S 367 (449)
T ss_dssp C
T ss_pred e
Confidence 4
No 184
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.75 E-value=1.5e-17 Score=173.21 Aligned_cols=181 Identities=15% Similarity=0.146 Sum_probs=140.9
Q ss_pred cchhHHHHHHHHHHHHHHHhC--CCC---CCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcH
Q 013675 165 IFQSVARFEAEVIAMTAALLG--NKE---KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY 239 (438)
Q Consensus 165 ~~~~~~~~e~~~~~~~a~l~g--~~~---~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~ 239 (438)
...+..++++++.+++.+.++ .+. ++ + ++|+|+|+|+.+++.++..+....+| ++|+++.++|.++
T Consensus 136 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~----i--~~t~G~t~al~~~~~~l~~~~l~~~g---d~Viv~~p~~~~~ 206 (533)
T 3f6t_A 136 PDRCLVNTEKIINYFLQELSYKDANLAEQTD----L--FPTEGGTAAIVYAFHSLAENHLLKKG---DKIAINEPIFTPY 206 (533)
T ss_dssp SSSCCHHHHHHHHHHHHHHHTTTCCCGGGEE----E--EEEEHHHHHHHHHHHHHHHTTSSCTT---CEEEEESSCCHHH
T ss_pred CcccHHHHHHHHHHHHHHhcCCCCCCCCcce----E--EEECCHHHHHHHHHHHhhhhhccCCc---CEEEEcCCCcHHH
Confidence 345667888888888876633 222 23 5 89999999999999884321111356 8999999999999
Q ss_pred HHHHhhcCcEEEEeeCC----CCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHH---HHHHHHH-HcCCeEEEecc
Q 013675 240 DKAAQYFNIKLWRVPVD----KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQ---ELGELAL-SHGTCLHVDLC 311 (438)
Q Consensus 240 ~~a~~~~Gi~v~~v~~~----~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~---~I~~la~-~~~i~lhVD~a 311 (438)
...++..|.+++.+|++ .++.+|+++|++++++++++|++++|+||||.+.|.+ +|+++|+ +||+++++|++
T Consensus 207 ~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~ 286 (533)
T 3f6t_A 207 LRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEV 286 (533)
T ss_dssp HTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECT
T ss_pred HHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCC
Confidence 99999999999999985 3688999999999999999999999999999998765 8888888 68999999999
Q ss_pred ccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCC--cEEEEEeccc
Q 013675 312 LGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNRE 363 (438)
Q Consensus 312 ~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~ 363 (438)
|+++... .+++.....+.++++.+++|. ++++| +|+++.+++.
T Consensus 287 y~~~~~~--------~~~~~~~~~~~~i~~~S~SK~-~g~~G~RiG~l~~~~~~ 331 (533)
T 3f6t_A 287 YGAFVPN--------FKSIYSVVPYNTMLVYSYSKL-FGCTGWRLGVIALNEKN 331 (533)
T ss_dssp TGGGSTT--------CCCHHHHSGGGEEEEEESHHH-HTCGGGCEEEEEEESSC
T ss_pred ccccccC--------ccCHhhcCCCCEEEEecCccc-CCCcccceEEEEECcHH
Confidence 9876531 111211223457889999999 56666 8998888763
No 185
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.60 E-value=9.8e-20 Score=181.99 Aligned_cols=239 Identities=13% Similarity=0.073 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHHHHHhC--CCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhc
Q 013675 169 VARFEAEVIAMTAALLG--NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF 246 (438)
Q Consensus 169 ~~~~e~~~~~~~a~l~g--~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~ 246 (438)
..++++++.+++.+.+| .++++ + ++|+|+++|+.++++++.. +| ++|+++.+.|.++...++..
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~----v--~~~~g~~~a~~~~~~~~~~-----~g---d~vl~~~p~~~~~~~~~~~~ 133 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFDKED----I--VFVEGVVPAISIAIQAFTK-----EG---EAVLINSPVYPPFARSVRLN 133 (392)
Confidence 56777888888888777 44444 6 8999999999999998853 56 88999999999999999999
Q ss_pred CcEEEEeeCC-C--CCccCHHHHHHhhc-cCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccchhhhh
Q 013675 247 NIKLWRVPVD-K--EFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVLPF 319 (438)
Q Consensus 247 Gi~v~~v~~~-~--~~~~d~~~Le~~I~-~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg~~~pf 319 (438)
|.+++.+|.+ + ++.+|+++++++++ +++++|++++|+||+|.+.| +++|+++|++||+++++|++|+++...
T Consensus 134 g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~- 212 (392)
T 3b1d_A 134 NRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLF- 212 (392)
Confidence 9999999985 3 35699999999998 67889999999999999865 899999999999999999999877642
Q ss_pred hhhcCCCCCCCccCC--CCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHH
Q 013675 320 AKKLGYPIPPFDFSV--QGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAG 396 (438)
Q Consensus 320 ~~~~g~~~p~~~~~~--~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~ 396 (438)
..+. .+-..... .+.+++..+++|.+. ++..+|+++.+++++..........|. . ++.+....++
T Consensus 213 --g~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~a 280 (392)
T 3b1d_A 213 --GHEH-VSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNN--------H-HEVSSLGYIA 280 (392)
Confidence 0000 11111111 345678889999953 445688888776544432211111110 0 0001111122
Q ss_pred HHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhc-CCCccc
Q 013675 397 AWAALMSLGQEGYLENTKAIMEVSESIQKGLVL-FPMFLP 435 (438)
Q Consensus 397 ~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~g~~~ 435 (438)
+.+++. .+.+.+++..++..++++++.+.|++ +|++++
T Consensus 281 ~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 319 (392)
T 3b1d_A 281 TETAYR-YGKPWLVALKAVLEENIQFAVEYFAQEAPRLKV 319 (392)
Confidence 333443 23456777888888899999999987 677654
No 186
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.74 E-value=2.1e-16 Score=157.50 Aligned_cols=224 Identities=18% Similarity=0.095 Sum_probs=146.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCC--CCCeEEecCCCcCcHHHHHhhcCc-
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI--TRPEMIIPVSAHSAYDKAAQYFNI- 248 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~--~~~~Viv~~~~h~s~~~a~~~~Gi- 248 (438)
...++++++++++|. +. + ++|+|||+|+.+++++++.......|. .+++|+++.++|.+....+...+.
T Consensus 79 ~~~~l~~~la~~~g~--~~----v--~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~ 150 (392)
T 3ruy_A 79 QLGPWYEKVAKLTNK--EM----V--LPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSN 150 (392)
T ss_dssp THHHHHHHHHHHHTC--SE----E--EEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSC
T ss_pred HHHHHHHHHHHhcCC--CE----E--EEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCC
Confidence 345666788888883 22 5 899999999999999887532222222 136899999888765554443321
Q ss_pred ------------EEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccC----HHHHHHHHHHcCCeEEEeccc
Q 013675 249 ------------KLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 249 ------------~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd----i~~I~~la~~~~i~lhVD~a~ 312 (438)
++..++.+ |+++|+++++++|++|++++++||+|.+.| +++|+++|++||+++|+|++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~ 225 (392)
T 3ruy_A 151 EEYKRGFGPMLPGIIVIPYG-----DLEALKAAITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQ 225 (392)
T ss_dssp TTTTTTCCSCCSSEEEECTT-----CHHHHHHHCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTT
T ss_pred hhhccccCCCCCCCeeeCcc-----cHHHHHHHhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeech
Confidence 24445443 899999999999999999999999999998 999999999999999999999
Q ss_pred cchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCC-CCcEEEEEecccccccchhcccccCCCccCCCCccCCCCC
Q 013675 313 GGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG 391 (438)
Q Consensus 313 gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p-~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~ 391 (438)
+++... |... ..+......|++++| |.+.++ ..+|+++.++ ++....... ..+.. . +-+.
T Consensus 226 ~~~~~~-----g~~~-~~~~~~~~~d~~~~S--K~l~gG~~~~G~~~~~~-~~~~~~~~~---~~~~~-----~--~~~~ 286 (392)
T 3ruy_A 226 TGLGRT-----GKVF-ACDWDNVTPDMYILG--KALGGGVFPISCAAANR-DILGVFEPG---SHGST-----F--GGNP 286 (392)
T ss_dssp TTTTTT-----SSSS-GGGGGTCCCSEEEEC--GGGGTTTSCCEEEEECH-HHHTTCCTT---SSCCS-----S--TTCH
T ss_pred hCCCcc-----ccch-hhhccCCCCCEEEEc--hhhhCChhhhEEEEECH-HHHhhhccC---CcCCC-----C--CCCH
Confidence 765431 1101 122222235888776 874332 4588887764 332211000 00000 0 1111
Q ss_pred chHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 392 GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 392 ~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
...+++.++++.+. .++..++..++++++.+.|+++
T Consensus 287 ~~~~a~~~~l~~~~---~~~~~~~~~~~~~~l~~~L~~~ 322 (392)
T 3ruy_A 287 LACAVSIAALEVLE---EEKLTERSLQLGEKLVGQLKEI 322 (392)
T ss_dssp HHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHh
Confidence 12334444554332 2677888899999999999886
No 187
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.74 E-value=1.2e-17 Score=166.62 Aligned_cols=239 Identities=12% Similarity=0.089 Sum_probs=155.6
Q ss_pred cccchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeE--cCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHH
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNM--TSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYD 240 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~--t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~ 240 (438)
|...++..++++.+.+++... +.++++ + ++ |+|||+|+.+++++++.. .+| ++|+++.++|.++.
T Consensus 65 y~~~~g~~~lr~~la~~~~~~-~~~~~~----v--~~~~~~g~~~a~~~~~~~~~~~---~~g---d~vl~~~p~~~~~~ 131 (394)
T 2ay1_A 65 YAGLSGEPEFQKAMGELILGD-GLKSET----T--ATLATVGGTGALRQALELARMA---NPD---LRVFVSDPTWPNHV 131 (394)
T ss_dssp CCCSSCCHHHHHHHHHHHHGG-GCCGGG----E--EEEEEEHHHHHHHHHHHHHHHH---CTT---CCEEEEESCCHHHH
T ss_pred CCCCCCcHHHHHHHHHHHhCC-CCCccc----E--EEEecCCchhHHHHHHHHHHhc---CCC---CEEEEcCCCChhHH
Confidence 333344555666555444211 224444 5 67 999999999999887632 256 89999999999999
Q ss_pred HHHhhcCcEEEEeeCC--CCCccCHHHHHHhhccC---cEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccc
Q 013675 241 KAAQYFNIKLWRVPVD--KEFRADVKAIKKYINRN---TVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 241 ~a~~~~Gi~v~~v~~~--~~~~~d~~~Le~~I~~~---t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~ 312 (438)
..++..|.+++.+|++ +++.+|+++++++++++ ++++++++|+||||.+.| +++|+++|+++|+++++|++|
T Consensus 132 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 211 (394)
T 2ay1_A 132 SIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAY 211 (394)
T ss_dssp HHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCc
Confidence 9999999999999986 57889999999999753 678888999999999976 568899999999999999999
Q ss_pred cchhhhhhhhcCCCCCCCc-cCCCCc-cEEEeCCCCCCCCCCC--cEEEEE--eccccccc---chh--cccccCCCccC
Q 013675 313 GGFVLPFAKKLGYPIPPFD-FSVQGV-TSISVDVHKYGLAPKG--TSVVLY--RNREIRKH---QFV--AVTEWSGGLYV 381 (438)
Q Consensus 313 gg~~~pf~~~~g~~~p~~~-~~~~gv-dsis~s~hK~~~~p~g--~g~l~~--r~~~~~~~---~~~--~~~~~~g~~~~ 381 (438)
+++...--.. . . ++. +...+. +++..+++|+ ++++| +|+++. .++++... ... ....|.
T Consensus 212 ~~~~~~~~~~-~--~-~~~~~~~~~~~~i~~~s~sK~-~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~----- 281 (394)
T 2ay1_A 212 QGFGDGLEED-A--A-GTRLIASRIPEVLIAASCSKN-FGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYS----- 281 (394)
T ss_dssp TTSSSCHHHH-H--H-HHHHHHHHCSSEEEEEECTTT-TTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTS-----
T ss_pred cccccCcccc-h--H-HHHHHhhcCCCEEEEEeccCC-CcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcC-----
Confidence 8754300000 0 0 000 111122 4667788999 55555 598887 23432211 000 001111
Q ss_pred CCCccCCCCCchHHHHHHHHHHH-----cHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 382 SPTVAGSRPGGLIAGAWAALMSL-----GQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 382 ~~~~~gsr~~~~ia~~~aal~~~-----g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
..+....+++..++... -.+++++..++..++++++.+.|+++
T Consensus 282 ------~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (394)
T 2ay1_A 282 ------FPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDL 329 (394)
T ss_dssp ------SCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------CCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00111122222333211 02467778888888999999988775
No 188
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.74 E-value=9.7e-18 Score=164.67 Aligned_cols=215 Identities=16% Similarity=0.129 Sum_probs=153.1
Q ss_pred HHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEee
Q 013675 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVP 254 (438)
Q Consensus 175 ~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~ 254 (438)
++++++++++|.++++ + ++|+|+|+++.++++++. | ++|+++.++|.++...++..|++++.+|
T Consensus 54 ~lr~~la~~~~~~~~~----i--~~t~g~~~al~~~~~~l~-------g---d~Vi~~~p~~~~~~~~~~~~g~~~~~v~ 117 (350)
T 3fkd_A 54 TLRQMLAKRNSVDNNA----I--LVTNGPTAAFYQIAQAFR-------G---SRSLIAIPSFAEYEDACRMYEHEVCFYP 117 (350)
T ss_dssp HHHHHHHHHTTCCGGG----E--EEESHHHHHHHHHHHHTT-------T---CEEEEEESCCHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCcCHHH----E--EEcCCHHHHHHHHHHHHC-------C---CEEEEeCCCcHHHHHHHHHcCCeEEEEe
Confidence 5677899999987765 6 899999999999998864 4 8999999999999999999999999999
Q ss_pred C-CCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcC-CeEEEeccccchhhhhhhhcCCCCCCCcc
Q 013675 255 V-DKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHG-TCLHVDLCLGGFVLPFAKKLGYPIPPFDF 332 (438)
Q Consensus 255 ~-~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~-i~lhVD~a~gg~~~pf~~~~g~~~p~~~~ 332 (438)
+ +++..+++ ++|++|++++|+||||.+.|+++|.++++.++ .++++|++|+.+... +. .+....
T Consensus 118 ~~~~~~~~~~--------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~-----~~-~~~~~~ 183 (350)
T 3fkd_A 118 SNEDIGEADF--------SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTE-----EV-IRPADI 183 (350)
T ss_dssp TTSCGGGSCC--------TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSS-----CC-CCGGGG
T ss_pred cCCccccCcc--------CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccC-----cc-hhhHHh
Confidence 9 65445554 57899999999999999999999999999876 799999999765431 11 111222
Q ss_pred CCCCccEEEeCCCCCCC-CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHHH-HH
Q 013675 333 SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEG-YL 410 (438)
Q Consensus 333 ~~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g-~~ 410 (438)
...+.++++.+++|++. .+.++|+++. ++++.+........| .....+++++...+.... +.
T Consensus 184 ~~~~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~l~~~~~~~ 247 (350)
T 3fkd_A 184 KGRKNLVMVYSFSHAYGIPGLRIGYIVA-NKDFMKRVAAFSTPW---------------AVNALAIEAAKFILIHPAQFT 247 (350)
T ss_dssp TTCSSEEEEEESHHHHSCGGGCCEEEEC-CHHHHHHHHTTCCTT---------------CSCHHHHHHHHHHHHCTTTTC
T ss_pred hcCCCEEEEecCchhccCcchheEeEEe-CHHHHHHHHHhCCCC---------------CCCHHHHHHHHHHHhCHHHHH
Confidence 33455688889999953 4456888777 454443221111111 011224444444332222 33
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 411 ENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 411 ~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+..++..++++++.+.|+++|++++
T Consensus 248 ~~~~~~~~~~~~l~~~L~~~~~~~~ 272 (350)
T 3fkd_A 248 LPIRKWQRNTVDFITALNRLDGVEV 272 (350)
T ss_dssp CCHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 4444555889999999998888764
No 189
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.73 E-value=5e-17 Score=163.20 Aligned_cols=184 Identities=15% Similarity=0.196 Sum_probs=130.5
Q ss_pred CcccchhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCC--CCCeEEec-CCCc
Q 013675 162 HLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI--TRPEMIIP-VSAH 236 (438)
Q Consensus 162 ~~~~~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~--~~~~Viv~-~~~h 236 (438)
.|...++..++.+.+.+++.+.+|.+ +++ + ++|+|+|+|+.++++++.. +|- ++.+|+++ .+.|
T Consensus 70 ~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~----i--~~t~G~t~al~~~~~~l~~-----~gd~~~~~~vi~~~~p~~ 138 (417)
T 3g7q_A 70 NYDGPQGKTALLNALAVLLRETLGWDIEPQN----I--ALTNGSQSAFFYLFNLFAG-----RRADGSTKKVLFPLAPEY 138 (417)
T ss_dssp STTCTTSHHHHHHHHHHHHHHHHCCCCCGGG----E--EEESCHHHHHHHHHHHHSB-----C----CCBEEEESSCCCH
T ss_pred ccCCCCCcHHHHHHHHHHHHHHhCCCCCccc----E--EEeCCcHHHHHHHHHHHcC-----CCccCCcceEEEeCCCcc
Confidence 34456677788888888888777754 444 6 9999999999999999863 441 01289998 8888
Q ss_pred CcHHHHHhhc------CcEEEEeeCCC-CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeE
Q 013675 237 SAYDKAAQYF------NIKLWRVPVDK-EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCL 306 (438)
Q Consensus 237 ~s~~~a~~~~------Gi~v~~v~~~~-~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~l 306 (438)
..+...+... +..+..++.+. ++.+|+++++ ++++|++|++++|+||||.+.| +++|+++|++||+++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~l 216 (417)
T 3g7q_A 139 IGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPL 216 (417)
T ss_dssp HHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCE
T ss_pred ccchhhccchhhhccccCcccccCCcccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEE
Confidence 8887665322 34555555442 4678999998 7888999999999999999988 889999999999999
Q ss_pred EEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEeccccc
Q 013675 307 HVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIR 365 (438)
Q Consensus 307 hVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~ 365 (438)
++|++|+.+... ..+ ........+.+++..+++|++..+.++|+++.+ +++.
T Consensus 217 i~De~~~~~~~~----~~~--~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~ 268 (417)
T 3g7q_A 217 VIDNAYGVPFPG----IIF--SEARPLWNPNIILCMSLSKLGLPGSRCGIIIAN-DKTI 268 (417)
T ss_dssp EEECTTCTTTTC----CBC--SCCCCCCCTTEEEEEESGGGTCTTSCCEEEECC-HHHH
T ss_pred EEeCCCcccccc----ccc--cccccCCCCCEEEEEechhccCCCcceEEEEeC-HHHH
Confidence 999999753211 000 011112345688899999986666678986654 4443
No 190
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.71 E-value=1.5e-16 Score=160.67 Aligned_cols=169 Identities=16% Similarity=0.088 Sum_probs=126.1
Q ss_pred HHHHHHHHHhCCCCCCCCCccceeEcCChHHHH--HHHHHHHHHHHHHhc---CC------CCCeEEecCCCcCcHHHHH
Q 013675 175 EVIAMTAALLGNKEKASGGQVCGNMTSGGTESI--LLAVKSSRDYMRNKR---GI------TRPEMIIPVSAHSAYDKAA 243 (438)
Q Consensus 175 ~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~--~~al~a~~~~~~~~~---G~------~~~~Viv~~~~h~s~~~a~ 243 (438)
++++.++++++.++++ + ++|+|+++++ .++++++.. + |. +.++|+++.++|+.+..++
T Consensus 80 ~lr~~ia~~~~~~~~~----i--~~t~G~~~al~l~~~~~~l~~-----~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~ 148 (422)
T 3d6k_A 80 DIRELWAEALGLPADL----V--VAQDGSSLNIMFDLISWSYTW-----GNNDSSRPWSAEEKVKWLCPVPGYDRHFTIT 148 (422)
T ss_dssp HHHHHHHHHHTCCGGG----E--EECSSCHHHHHHHHHHHHHHH-----CCTTCSSCGGGSSCCEEEEEESCCHHHHHHH
T ss_pred HHHHHHHHHhCCChhH----E--EEecchHHHHHHHHHHHHhcC-----cccccccccccCCCCEEEEeCCccHHHHHHH
Confidence 3444567777888765 6 8999999997 455565542 2 20 1257999999999999999
Q ss_pred hhcCcEEEEeeCCCCCccCHHHHHHhhcc-CcEEEE-EecCCCCCccccCHH---HHHHHHH-HcCCeEEEeccccc--h
Q 013675 244 QYFNIKLWRVPVDKEFRADVKAIKKYINR-NTVLIV-GSAPGFPHGIIDPIQ---ELGELAL-SHGTCLHVDLCLGG--F 315 (438)
Q Consensus 244 ~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~-~t~~vv-~~~~~~~tG~iddi~---~I~~la~-~~~i~lhVD~a~gg--~ 315 (438)
+..|++++.+|+++++ +|+++|++++++ ++++|+ .++|+||||.+.|.+ +|+++|+ ++|+++++|++|+. +
T Consensus 149 ~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~ 227 (422)
T 3d6k_A 149 EHFGFEMINVPMTDEG-PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTL 227 (422)
T ss_dssp HHHTCEEEEEEEETTE-ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBS
T ss_pred HHcCCEEEecCCCCCC-CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCcccccc
Confidence 9999999999998765 999999999986 788877 789999999998876 7778888 99999999999963 3
Q ss_pred hhhhhhhcCCCCCCC-c----cCCCCccEEEeCCCCCCCCCCCcEEEEEe
Q 013675 316 VLPFAKKLGYPIPPF-D----FSVQGVTSISVDVHKYGLAPKGTSVVLYR 360 (438)
Q Consensus 316 ~~pf~~~~g~~~p~~-~----~~~~gvdsis~s~hK~~~~p~g~g~l~~r 360 (438)
.. -+...+++ + ....+.+++..+++|++..+.++|+++.+
T Consensus 228 ~~-----~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~ 272 (422)
T 3d6k_A 228 SD-----EFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASS 272 (422)
T ss_dssp SS-----CCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECC
T ss_pred CC-----CCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeC
Confidence 21 01001112 1 12345678888999995444568998765
No 191
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.71 E-value=3e-16 Score=158.66 Aligned_cols=234 Identities=14% Similarity=0.114 Sum_probs=155.6
Q ss_pred cccchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHH
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKA 242 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a 242 (438)
+...++..++++++.+++.+.++.++++ + ++|+|+++++.+ +.++. .+| |+|+++.+.|+++...
T Consensus 94 y~~~~g~~~l~~~ia~~~~~~~~~~~~~----i--~~t~G~~~al~~-l~~l~-----~~g---d~Vl~~~p~y~~~~~~ 158 (432)
T 3ei9_A 94 YGAEQGAKPLRAAIAKTFYGGLGIGDDD----V--FVSDGAKCDISR-LQVMF-----GSN---VTIAVQDPSYPAYVDS 158 (432)
T ss_dssp CCCTTCCHHHHHHHHHHHHTTTTCCGGG----E--EEESCHHHHHHH-HHHHH-----CTT---CCEEEEESCCTHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHccCCCCcce----E--EECCChHHHHHH-HHHHc-----CCC---CEEEEeCCCCHHHHHH
Confidence 3334556777777777776555666655 6 899999999986 34443 367 8999999999999999
Q ss_pred HhhcCc------------EEEEeeCCC--CCccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCe
Q 013675 243 AQYFNI------------KLWRVPVDK--EFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTC 305 (438)
Q Consensus 243 ~~~~Gi------------~v~~v~~~~--~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~ 305 (438)
++..|. +++.+|+++ +...|+++ .+++++|++++|+||||.+.+ +++|+++|++||++
T Consensus 159 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~ 233 (432)
T 3ei9_A 159 SVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSI 233 (432)
T ss_dssp HHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHcCCcccccccccccCceEEeccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcE
Confidence 988874 688888875 34455443 357889999999999999876 66777789999999
Q ss_pred EEEeccccchhhhhhhhcCCCCCCCcc-CCCCccEEEeCCCCCCC-CCCCcEEEEEeccccc------ccchhcccccCC
Q 013675 306 LHVDLCLGGFVLPFAKKLGYPIPPFDF-SVQGVTSISVDVHKYGL-APKGTSVVLYRNREIR------KHQFVAVTEWSG 377 (438)
Q Consensus 306 lhVD~a~gg~~~pf~~~~g~~~p~~~~-~~~gvdsis~s~hK~~~-~p~g~g~l~~r~~~~~------~~~~~~~~~~~g 377 (438)
+++|++|+++... ..+ .+.... ...+.+++..+++|.+. .+..+|+++.+++... ...+......
T Consensus 234 li~Dea~~~~~~~---~~~--~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-- 306 (432)
T 3ei9_A 234 IVYDSAYAMYMSD---DNP--RSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICT-- 306 (432)
T ss_dssp EEEECTTGGGCCS---SCC--SSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHH--
T ss_pred EEEccchHhhccC---CCC--CChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhcc--
Confidence 9999999876541 101 000111 12245788999999943 4455898877655411 1111100000
Q ss_pred CccCCCCccCCCCCchHHHHHHHHHHH---cHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 378 GLYVSPTVAGSRPGGLIAGAWAALMSL---GQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 378 ~~~~~~~~~gsr~~~~ia~~~aal~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
.-.+....++.+++..+ +.+.+++..++..++++++.+.|+++ |++
T Consensus 307 ----------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 355 (432)
T 3ei9_A 307 ----------CFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYD 355 (432)
T ss_dssp ----------SCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred ----------ccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-Cce
Confidence 00011122344444333 34567888889999999999999886 554
No 192
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.70 E-value=1.4e-16 Score=159.56 Aligned_cols=223 Identities=14% Similarity=0.115 Sum_probs=144.3
Q ss_pred hhHHHHHHHHHHHHHHH--hC-CCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHH
Q 013675 167 QSVARFEAEVIAMTAAL--LG-NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA 243 (438)
Q Consensus 167 ~~~~~~e~~~~~~~a~l--~g-~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~ 243 (438)
++..++++ .++++ .| .++++ + ++|+|+++++.+++..+ .+| ++|+++.++|.++..++
T Consensus 75 ~g~~~lr~----~la~~l~~g~~~~~~----v--~~~~G~~~al~~~~~~~------~~g---d~Vl~~~p~y~~~~~~~ 135 (400)
T 3asa_A 75 FGLPALRQ----KLSEDFYRGFVDAKE----I--FISDGAKVDLFRLLSFF------GPN---QTVAIQDPSYPAYLDIA 135 (400)
T ss_dssp TCCHHHHH----HHHHTTSTTSSCGGG----E--EEESCHHHHHHHHHHHH------CSS---CEEEEEESCCHHHHHHH
T ss_pred CCCHHHHH----HHHHHHHcCCCCHHH----E--EEccChHHHHHHHHHHc------CCC---CEEEECCCCcHHHHHHH
Confidence 34444444 45665 56 55554 6 89999999999865332 266 89999999999999999
Q ss_pred hhcCcE-EEEeeCCCC--CccCHHHHHHhhccCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEEEeccccchhh
Q 013675 244 QYFNIK-LWRVPVDKE--FRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLHVDLCLGGFVL 317 (438)
Q Consensus 244 ~~~Gi~-v~~v~~~~~--~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lhVD~a~gg~~~ 317 (438)
+..|.+ ++.+|++++ ...|++ + + +++++|++++|+||||.+.| +++|+++|+++|+++++|++|+++..
T Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~l~---~-~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~ 210 (400)
T 3asa_A 136 RLTGAKEIIALPCLQENAFFPEFP---E-D-THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFIS 210 (400)
T ss_dssp HHTTCSEEEEEECCGGGTTCCCCC---T-T-CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCC
T ss_pred HHcCCcceEecccchhcCcccChh---h-c-cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhc
Confidence 999998 999998753 334432 2 1 57889999999999999987 56788999999999999999986542
Q ss_pred hhhhhcCCCCCCCcc-CC---CCccEEEeCCCCCCCCCC--CcEEEEEecccc------cccchhcccccCCCccCCCCc
Q 013675 318 PFAKKLGYPIPPFDF-SV---QGVTSISVDVHKYGLAPK--GTSVVLYRNREI------RKHQFVAVTEWSGGLYVSPTV 385 (438)
Q Consensus 318 pf~~~~g~~~p~~~~-~~---~gvdsis~s~hK~~~~p~--g~g~l~~r~~~~------~~~~~~~~~~~~g~~~~~~~~ 385 (438)
. +. . +... .. .+.+++..+++|++ +++ .+|+++.+++.. .......... ..
T Consensus 211 ~-----~~-~-~~~~~~~~~~~~~~i~~~s~sK~~-g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 273 (400)
T 3asa_A 211 D-----PS-L-PKSIFEIPDARFCAIEINSFSKPL-GFAGIRLGWTVIPQELTYADGHFVIQDWERFLS---------TT 273 (400)
T ss_dssp C-----TT-S-CSSGGGSTTGGGTEEEEEECCGGG-TTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHH---------HH
T ss_pred C-----CC-C-CCchhhCCCCCCceEEEecchhhc-CCcchheeEEeeChhhccchhhhHHHHHHHHhc---------cC
Confidence 1 10 0 1111 11 12458889999994 434 479987765431 1111100000 00
Q ss_pred cCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 013675 386 AGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFL 434 (438)
Q Consensus 386 ~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 434 (438)
.++-+ ..++.++...+....+++..++..++++++.+.|++. +++
T Consensus 274 ~~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 318 (400)
T 3asa_A 274 FNGAS---IPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT-GFE 318 (400)
T ss_dssp CCCCC---HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred ccCCC---hHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 00111 1123333333322246677888888999999999876 554
No 193
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.70 E-value=9.2e-16 Score=153.94 Aligned_cols=242 Identities=12% Similarity=0.149 Sum_probs=155.1
Q ss_pred CCcccchhHHHHHHHHHHHHHHHhCCC-----CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCC
Q 013675 161 LHLDIFQSVARFEAEVIAMTAALLGNK-----EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSA 235 (438)
Q Consensus 161 ~~~~~~~~~~~~e~~~~~~~a~l~g~~-----~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~ 235 (438)
..|...++..++++++.+++ .|.+ +++ +....|.||++|+..+...++.. ..+| ++|+++.++
T Consensus 73 ~~y~~~~g~~~lr~~ia~~~---~~~~~~~~~~~~----i~~~~~~~g~ga~~~~~~~~~~~--~~~g---d~Vlv~~p~ 140 (409)
T 4eu1_A 73 MDYAPVTGIASFVEEAQKLC---FGPTCAALRDGR----IASCQTLGGTGALRIGGDLLNRF--VANC---NRIYGPDVG 140 (409)
T ss_dssp CCCCCTTCCHHHHHHHHHHH---HCSSCHHHHTTC----EEEEEESHHHHHHHHHHHHGGGT--SSSC---CEEEEESSC
T ss_pred ccCCCCCCcHHHHHHHHHHH---cCCCchhhccCc----eeeeecccchHHHHHHHHHHHHh--cCCC---CEEEEeCCC
Confidence 34444556566666655554 3554 333 32234899999998876544321 1256 899999999
Q ss_pred cCcHHHHHhhcCcEEEEeeCC--CCCccCHHHHHHhhc---cCcEEEEEecCCCCCccccC---HHHHHHHHHHcCCeEE
Q 013675 236 HSAYDKAAQYFNIKLWRVPVD--KEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP---IQELGELALSHGTCLH 307 (438)
Q Consensus 236 h~s~~~a~~~~Gi~v~~v~~~--~~~~~d~~~Le~~I~---~~t~~vv~~~~~~~tG~idd---i~~I~~la~~~~i~lh 307 (438)
|.++...++..|++++.+|++ +++.+|+++++++++ ++++++++++|+||||.+.+ +++|+++|++||++++
T Consensus 141 y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 220 (409)
T 4eu1_A 141 YPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPF 220 (409)
T ss_dssp CTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred cHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEE
Confidence 999999999999999999983 478899999999996 35677888999999999987 4569999999999999
Q ss_pred EeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCC--CCcEEE--EEeccc----ccccchhc-ccccCCC
Q 013675 308 VDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAP--KGTSVV--LYRNRE----IRKHQFVA-VTEWSGG 378 (438)
Q Consensus 308 VD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p--~g~g~l--~~r~~~----~~~~~~~~-~~~~~g~ 378 (438)
+|++|+++...-...-+..+..+. ....-.++..+++|. ++. ..+|++ ++.+++ +....... ...|...
T Consensus 221 ~De~y~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~-~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~ 298 (409)
T 4eu1_A 221 VDMAYQGFATGQLDYDAFVPRHLV-DMVPNLIVAQSFSKN-FGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNP 298 (409)
T ss_dssp EEESCTTTTTSCHHHHTHHHHHHH-TTSSCCEEEEECTTT-SSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred EeccccccccCCcccchHHHHHHH-hhCCcEEEEecCccc-ccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCC
Confidence 999998765310000000000000 111123566788898 443 347887 566655 32211110 0111110
Q ss_pred ccCCCCccCCCCCchHHHHHHHHHHHc--------HHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 379 LYVSPTVAGSRPGGLIAGAWAALMSLG--------QEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 379 ~~~~~~~~gsr~~~~ia~~~aal~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
+ ..+++++...+. .+.+++..++..++++++.+.|+++
T Consensus 299 -----------~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (409)
T 4eu1_A 299 -----------P---LYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKAC 344 (409)
T ss_dssp -----------C---HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------C---hHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 113333333232 3346777888899999999999886
No 194
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.70 E-value=7.8e-16 Score=153.93 Aligned_cols=223 Identities=14% Similarity=0.041 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcC----
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFN---- 247 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~G---- 247 (438)
...++++++++++|.+ + + ++|+|||+|+.+++++++.+.....+..+++|+++.+.|......+...+
T Consensus 82 ~~~~l~~~la~~~~~~--~----v--~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~ 153 (406)
T 4adb_A 82 PVLRLAKKLIDATFAD--R----V--FFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPA 153 (406)
T ss_dssp HHHHHHHHHHHHSSCS--E----E--EEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGG
T ss_pred HHHHHHHHHHhhCCCC--e----E--EEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCcc
Confidence 4566778899998765 3 5 89999999999999998754332211123788888877666544333332
Q ss_pred ---------cEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccc-----cCHHHHHHHHHHcCCeEEEecccc
Q 013675 248 ---------IKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGII-----DPIQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 248 ---------i~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~i-----ddi~~I~~la~~~~i~lhVD~a~g 313 (438)
.++..+|. .|+++|++++++++++|+++ |+||+|.+ +++++|.++|++||+++|+|++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~ 227 (406)
T 4adb_A 154 YSQDFAPLPADIRHAAY-----NDINSASALIDDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT 227 (406)
T ss_dssp GTGGGCSCCSSEEEECT-----TCHHHHHTTCSTTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred ccccCCCCCCCceEeCC-----CcHHHHHHHhcCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 24444443 38999999999999999999 89999965 468999999999999999999998
Q ss_pred chhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCch
Q 013675 314 GFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGL 393 (438)
Q Consensus 314 g~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ 393 (438)
++... |... .++......|++++ +|.+.++..+|+++.+++ +.+..... ..+.. . +-+...
T Consensus 228 ~~~~~-----g~~~-~~~~~~~~~d~~t~--sK~~~~G~r~G~~~~~~~-~~~~~~~~---~~~~~-----~--~~~~~~ 288 (406)
T 4adb_A 228 GVGRT-----GELY-AYMHYGVTPDLLTT--AKALGGGFPVGALLATEE-CARVMTVG---THGTT-----Y--GGNPLA 288 (406)
T ss_dssp TTTTT-----SSSS-HHHHHTCCCSEEEE--CGGGGTTSCCEEEEECHH-HHHTCCTT---SSCCS-----S--TTCHHH
T ss_pred CCCcc-----chhH-HHHhcCCCCCEEEe--chhhcCCCCeEEEEEcHH-HHhhhccC---CcCCC-----C--CCCHHH
Confidence 65321 1100 11111223577765 899654455898776543 32211000 00000 0 111112
Q ss_pred HHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 394 IAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 394 ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
.+++.++++.+.. ++..++..++++++.+.|+++
T Consensus 289 ~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~ 322 (406)
T 4adb_A 289 SAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTI 322 (406)
T ss_dssp HHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHH
Confidence 2333444443322 566777778888888887654
No 195
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.70 E-value=3.5e-16 Score=156.31 Aligned_cols=220 Identities=14% Similarity=0.069 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHH-hcCCCCCeEEecCCC-cCcHHHHHhhcCc
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRN-KRGITRPEMIIPVSA-HSAYDKAAQYFNI 248 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~-~~G~~~~~Viv~~~~-h~s~~~a~~~~Gi 248 (438)
+...++++.+++++|. ++ + ++|+|||+|+..++++++.+... .+| +++|+++++. |.+...++...|.
T Consensus 82 ~~~~~l~~~la~~~g~--~~----v--~~~~gg~~a~~~al~~~~~~~~~~~~~--~~~vi~~~~~yh~~~~~~~~~~g~ 151 (397)
T 2ord_A 82 RPQMELAELLSKNTFG--GK----V--FFANTGTEANEAAIKIARKYGKKKSEK--KYRILSAHNSFHGRTLGSLTATGQ 151 (397)
T ss_dssp HHHHHHHHHHHHTTTS--CE----E--EEESSHHHHHHHHHHHHHHHHHHHCTT--CCEEEEEBTCCCCSSHHHHHHSBC
T ss_pred HHHHHHHHHHHHhcCC--Ce----E--EEeCCHHHHHHHHHHHHHHHhhcCCCC--CceEEEEcCCcCCCchhhhhccCC
Confidence 3455677788888874 22 5 89999999999999988643211 022 2567776655 5666667778777
Q ss_pred E------------EEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCcc----ccCHHHHHHHHHHcCCeEEEeccc
Q 013675 249 K------------LWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGI----IDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 249 ~------------v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~----iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+ ++.+|.+ |+++|+++++++|++|++++++||+|. .+++++|+++|++||+++++|++|
T Consensus 152 ~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~ 226 (397)
T 2ord_A 152 PKYQKPFEPLVPGFEYFEFN-----NVEDLRRKMSEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQ 226 (397)
T ss_dssp HHHHGGGCSCCTTEEEECTT-----CHHHHHHHCCTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred hhhccccCCCCCCeeEecCC-----CHHHHHHHhhcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecc
Confidence 6 7777753 899999999999999999999999999 367999999999999999999999
Q ss_pred cchhhhhhhhcCCCCCCCccC--CCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCC
Q 013675 313 GGFVLPFAKKLGYPIPPFDFS--VQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (438)
Q Consensus 313 gg~~~pf~~~~g~~~p~~~~~--~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~ 390 (438)
+++... |. .+... ....|++++ +|++.++.++|+++.+++ +. .+.. ...+. +. +-+
T Consensus 227 ~~~~~~-----g~---~~~~~~~~~~~d~~s~--sK~~~~G~r~G~~~~~~~-~~--~l~~--~~~~~-----~~--~~~ 284 (397)
T 2ord_A 227 CGMGRT-----GK---LFAYQKYGVVPDVLTT--AKGLGGGVPIGAVIVNER-AN--VLEP--GDHGT-----TF--GGN 284 (397)
T ss_dssp TTTTTT-----SS---SSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECST-TC--CCCT--TSSCC-----SS--TTC
T ss_pred cCCccC-----cc---chhhhhhCCCCCeeee--ccccCCCcCeEEEEEchH-hc--ccCC--CCcCC-----CC--CCC
Confidence 765321 11 11111 112577755 699666667999888765 22 1110 00000 11 111
Q ss_pred CchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 391 GGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 391 ~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
....+++.++++.+.. ++..++..++++++.+.|+++
T Consensus 285 ~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~ 321 (397)
T 2ord_A 285 PLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEM 321 (397)
T ss_dssp HHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHH
Confidence 1123344455554432 456677778888888888654
No 196
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.67 E-value=3.6e-15 Score=150.66 Aligned_cols=232 Identities=13% Similarity=0.099 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc-HHHHHhhcC----
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYFN---- 247 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s-~~~a~~~~G---- 247 (438)
..++.+.++++++.+.++ + ++|+|||+|+.+++++++.+... +|.++++|+++.+.|.. ...++...|
T Consensus 88 ~~~l~~~la~~~~~~~~~----v--~~~~ggtea~~~ai~~~~~~~~~-~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~ 160 (429)
T 1s0a_A 88 AIELCRKLVAMTPQPLEC----V--FLADSGSVAVEVAMKMALQYWQA-KGEARQRFLTFRNGYHGDTFGAMSVCDPDNS 160 (429)
T ss_dssp HHHHHHHHHHHSCTTCCE----E--EEESSHHHHHHHHHHHHHHHHHH-HTCCCCEEEEETTCCCCSSHHHHTTSCTTTT
T ss_pred HHHHHHHHHHhCCCCCCE----E--EEeCCHHHHHHHHHHHHHHHhcc-cCCCCCeEEEECCCCCCCchhhhhhcCCchh
Confidence 445667789999876654 6 99999999999999987643221 12112789988876544 333333211
Q ss_pred ---------cEEEEeeCCC-----C-CccCHHHHHHhhc---cCcEEEEEecC-CCCCccccC----HHHHHHHHHHcCC
Q 013675 248 ---------IKLWRVPVDK-----E-FRADVKAIKKYIN---RNTVLIVGSAP-GFPHGIIDP----IQELGELALSHGT 304 (438)
Q Consensus 248 ---------i~v~~v~~~~-----~-~~~d~~~Le~~I~---~~t~~vv~~~~-~~~tG~idd----i~~I~~la~~~~i 304 (438)
.+++.++++. + +.+|+++|+++++ +++++|+++.. +||+|.+.| +++|+++|++||+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~ 240 (429)
T 1s0a_A 161 MHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGI 240 (429)
T ss_dssp TGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTC
T ss_pred hcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 1345555541 2 3689999999997 46777776665 789998766 9999999999999
Q ss_pred eEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCC-CCcEEEEEecccccccchhcccccCCCccCCC
Q 013675 305 CLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLYVSP 383 (438)
Q Consensus 305 ~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p-~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~ 383 (438)
++|+|++|+++... |... .++......|+++++ |.+.+| .++|+++.++ ++.+.. .... .+. +
T Consensus 241 ~li~De~~~~~g~~-----g~~~-~~~~~~~~~d~~t~s--K~l~~G~~~iG~~~~~~-~~~~~l-~~~~--~~~-~--- 304 (429)
T 1s0a_A 241 LLIADEIATGFGRT-----GKLF-ACEHAEIAPDILCLG--KALTGGTMTLSATLTTR-EVAETI-SNGE--AGC-F--- 304 (429)
T ss_dssp EEEEECTTTTTTTT-----SSSS-GGGGGTCCCSEEEEC--GGGGTSSSCCEEEEECH-HHHHHH-HTST--TSS-C---
T ss_pred EEEEeehhhCCccc-----chHH-HhhhcCCCCCEEEec--ccccCCCccceEEEeCH-HHHHHh-hcCC--Ccc-c---
Confidence 99999999865421 1000 112112245787765 875566 7899988764 433221 1100 000 0
Q ss_pred CccCCCC--CchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 384 TVAGSRP--GGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 384 ~~~gsr~--~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
...++-. ....+++.++++.+.. .+..++..++++++.+.|+++
T Consensus 305 ~~~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l 350 (429)
T 1s0a_A 305 MHGPTFMGNPLACAAANASLAILES---GDWQQQVADIEVQLREQLAPA 350 (429)
T ss_dssp SCCCTTTTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHGGG
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHH
Confidence 0011111 1123344455554422 245667778888999988775
No 197
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.67 E-value=3.1e-15 Score=149.29 Aligned_cols=170 Identities=18% Similarity=0.119 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhc----
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF---- 246 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~---- 246 (438)
+...++.+++++++|. +. + ++|+|||+|+..++++++..... +|..+++|++..+.|......+...
T Consensus 78 ~~~~~l~~~la~~~~~--~~----v--~~~~gg~ea~~~al~~~~~~~~~-~g~~~~~vi~~~~~yhg~~~~~~~~~~~~ 148 (395)
T 3nx3_A 78 ENIAAAAKNLAKASAL--ER----V--FFTNSGTESIEGAMKTARKYAFN-KGVKGGQFIAFKHSFHGRTLGALSLTANE 148 (395)
T ss_dssp HHHHHHHHHHHHHHTC--SE----E--EEESSHHHHHHHHHHHHHHHHHH-TTCTTCEEEEETTCCCCSSHHHHTTCCCH
T ss_pred HHHHHHHHHHHHhcCC--Ce----E--EEeCCHHHHHHHHHHHHHHHhhc-cCCCCCEEEEEcCCcCCCCHHHHhhcCCc
Confidence 4566777788998873 33 5 89999999999999998764332 2333478988887765543222222
Q ss_pred ---------CcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccC----HHHHHHHHHHcCCeEEEecccc
Q 013675 247 ---------NIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 247 ---------Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~idd----i~~I~~la~~~~i~lhVD~a~g 313 (438)
+.++..+|.+ |+++|++++++++++|++..+++++|.+.+ +++|+++|++||+++|+|++|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~ 223 (395)
T 3nx3_A 149 KYQKPFKPLISGVKFAKYN-----DISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQC 223 (395)
T ss_dssp HHHGGGCSCCSCEEEECTT-----CHHHHHTTCCTTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred ccccccCCCCCCcEEeCCC-----CHHHHHHhccCCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 2356666653 799999999999999999999999999877 9999999999999999999998
Q ss_pred chhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecc
Q 013675 314 GFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNR 362 (438)
Q Consensus 314 g~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~ 362 (438)
++... |... ..+......|+++++ |.+.++.++|+++.+++
T Consensus 224 ~~g~~-----g~~~-~~~~~~~~~d~~t~s--K~~~~G~~~G~~~~~~~ 264 (395)
T 3nx3_A 224 GMGRS-----GKFF-AYEHAQILPDIMTSA--KALGCGLSVGAFVINQK 264 (395)
T ss_dssp TTTTT-----SSSS-GGGGGTCCCSEEEEC--GGGTTTSCCEEEEECHH
T ss_pred CCCcC-----Ccch-hHHhcCCCCCEEEec--ccccCCCceEEEEEchh
Confidence 76431 1100 111112235777765 77555677898877654
No 198
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.67 E-value=1.7e-15 Score=154.63 Aligned_cols=184 Identities=11% Similarity=0.072 Sum_probs=118.0
Q ss_pred cccchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCC-CeEEecCCCcCc-HH
Q 013675 163 LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITR-PEMIIPVSAHSA-YD 240 (438)
Q Consensus 163 ~~~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~-~~Viv~~~~h~s-~~ 240 (438)
+...++..++ ++++++++|.+ . + ++|+|||+|+.+++++++......+|.++ ++|+++ ..|+. +.
T Consensus 70 y~~~~~~~~l----~~~la~~~~~~--~----v--~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~ 136 (467)
T 2oqx_A 70 YSGSRSYYAL----AESVKNIFGYQ--Y----T--IPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFS-NYFFDTTQ 136 (467)
T ss_dssp SSSCHHHHHH----HHHHHHHHCCS--E----E--EEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEE-SSCCHHHH
T ss_pred eccCchhHHH----HHHHHHHhCcC--c----E--EEcCCcHHHHHHHHHHHhccccccCCCCccceEEec-ccccccch
Confidence 4344554444 55688888763 2 4 89999999999999998753111115333 667776 56654 33
Q ss_pred HHHhhcCcEEEEe------eCC----CCCccCHHHHHHhhcc----CcEEEEEecCCCCC-ccc---cCHHHHHHHHHHc
Q 013675 241 KAAQYFNIKLWRV------PVD----KEFRADVKAIKKYINR----NTVLIVGSAPGFPH-GII---DPIQELGELALSH 302 (438)
Q Consensus 241 ~a~~~~Gi~v~~v------~~~----~~~~~d~~~Le~~I~~----~t~~vv~~~~~~~t-G~i---ddi~~I~~la~~~ 302 (438)
......|..+... +.+ .++.+|+++|+++|++ +|++|++++++||+ |.+ +++++|+++|++|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~ 216 (467)
T 2oqx_A 137 GHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKY 216 (467)
T ss_dssp HHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHT
T ss_pred hhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHc
Confidence 4445556665543 222 3567999999999984 79999999999998 776 4588999999999
Q ss_pred CCeEEEeccccc-hhhh--h--hhhcCCCCCCCccC---CCCccEEEeCCCCCCCCCCCcEEEEEecc
Q 013675 303 GTCLHVDLCLGG-FVLP--F--AKKLGYPIPPFDFS---VQGVTSISVDVHKYGLAPKGTSVVLYRNR 362 (438)
Q Consensus 303 ~i~lhVD~a~gg-~~~p--f--~~~~g~~~p~~~~~---~~gvdsis~s~hK~~~~p~g~g~l~~r~~ 362 (438)
|+++|+|++++. .... . ....|. +...+. ...+|++++++||++..|.| |+++.+++
T Consensus 217 gi~li~D~a~~~e~~~~~~~~~~~~~g~--~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~~~ 281 (467)
T 2oqx_A 217 DIPVVMDSARFAENAYFIKQREAEYKDW--TIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDD 281 (467)
T ss_dssp TCCEEEECTTHHHHHHHHHHHCGGGTTS--CHHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSG
T ss_pred CCEEEEEchhhhhhhhhcccccccccCc--cHHHHhhhhhccCCeEEEecccccCCCCc-eEEEecCh
Confidence 999999988754 2110 0 000111 000110 12367889999999765645 66665554
No 199
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.65 E-value=3.8e-15 Score=150.36 Aligned_cols=223 Identities=17% Similarity=0.058 Sum_probs=143.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHh--cCCCCCeEEecCCCc-CcHHHHHhhcC
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNK--RGITRPEMIIPVSAH-SAYDKAAQYFN 247 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~--~G~~~~~Viv~~~~h-~s~~~a~~~~G 247 (438)
+...++.+.+++++|. ++ + ++|+|||+|+..++++++.+...+ +| +++|+++.+.| .....++...|
T Consensus 99 ~~~~~l~~~la~~~g~--~~----v--~~~~ggteA~~~al~~~~~~~~~~~~~g--~~~vi~~~~~yh~~~~~~~~~~g 168 (420)
T 2pb2_A 99 EPALRLGRKLIDATFA--ER----V--LFMNSGTEANETAFKLARHYACVRHSPF--KTKIIAFHNAFHGRSLFTVSVGG 168 (420)
T ss_dssp HHHHHHHHHHHHHSSC--SE----E--EEESSHHHHHHHHHHHHHHHHHHHTCTT--CCEEEEETTCCCCSSHHHHHHSS
T ss_pred HHHHHHHHHHHhhCCC--Ce----E--EEeCCHHHHHHHHHHHHHHHhhhccCCC--CCEEEEEeCCcCCcCHHHHHhcC
Confidence 4556777788888874 23 5 899999999999999988643321 22 34788887665 44455555555
Q ss_pred cE------------EEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCcc----ccCHHHHHHHHHHcCCeEEEecc
Q 013675 248 IK------------LWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGI----IDPIQELGELALSHGTCLHVDLC 311 (438)
Q Consensus 248 i~------------v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~----iddi~~I~~la~~~~i~lhVD~a 311 (438)
.+ +..+|.+ |+++|+++++++|++|+++.+++++|. .+++++|.++|++||+++++|++
T Consensus 169 ~~~~~~~~~p~~~~~~~~~~~-----d~~~le~~i~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev 243 (420)
T 2pb2_A 169 QPKYSDGFGPKPADIIHVPFN-----DLHAVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEV 243 (420)
T ss_dssp CHHHHTTSSSCCSCEEEECTT-----CHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred CccccccCCCCCCCeEEecCC-----CHHHHHHHhccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcC
Confidence 43 5566643 899999999999999999998888786 36799999999999999999999
Q ss_pred ccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCC
Q 013675 312 LGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG 391 (438)
Q Consensus 312 ~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~ 391 (438)
|.++.. .|... .++......|++++ +|++.++.++|+++.+++ +.+.. . ....+. +..+ +.
T Consensus 244 ~~g~~~-----~g~~~-~~~~~~~~~diit~--sK~l~~G~~iG~~~~~~~-l~~~l-~--~~~~~~-----t~~~--~~ 304 (420)
T 2pb2_A 244 QCGMGR-----TGDLF-AYMHYGVTPDILTS--AKALGGGFPVSAMLTTQE-IASAF-H--VGSHGS-----TYGG--NP 304 (420)
T ss_dssp TTTTTT-----TSSSS-HHHHHTCCCSEEEE--CGGGGTTSCCEEEEECHH-HHTTC-C------CC-----EECC--CH
T ss_pred CcCccc-----CCcHH-HHHhcCCCCCeEEe--cccccCCCceEEEEEhHH-HHHhh-c--CCCcCc-----ccCc--CH
Confidence 976532 11100 01111123577765 698665566899888754 33211 0 000011 1111 11
Q ss_pred chHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 392 GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 392 ~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
...+++.++++.+.. ++..++..++++++.+.|+++
T Consensus 305 ~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~ 340 (420)
T 2pb2_A 305 LACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAI 340 (420)
T ss_dssp HHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 123344455555433 356677778888888888654
No 200
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.64 E-value=6.7e-15 Score=148.70 Aligned_cols=177 Identities=17% Similarity=0.147 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCC-CCCeEEecCCCcCcHHHHHhhcCc-
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAYDKAAQYFNI- 248 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~-~~~~Viv~~~~h~s~~~a~~~~Gi- 248 (438)
+...++.++++++++.+.++ + ++|+||++|+..++++++..... +|. .+++|++..+.|..+...+...+.
T Consensus 72 ~~~~~l~~~la~~~~~~~~~----v--~~~~gg~ea~~~al~~~~~~~~~-~g~~~~~~vi~~~~~yhg~~~~~~~~~~~ 144 (430)
T 3i4j_A 72 DVLEEYAGRLARFVGLPTFR----F--WAVSGGSEATESAVKLARQYHVE-RGEPGRFKVITRVPSYHGASLGSLAASGM 144 (430)
T ss_dssp HHHHHHHHHHHHHTTCTTCE----E--EEESSHHHHHHHHHHHHHHHHHH-TTCTTCCEEEEETTC--------------
T ss_pred HHHHHHHHHHHHhCCCCCCE----E--EEeCcHHHHHHHHHHHHHHHHHh-cCCCCCcEEEEEeCCcCCCCcccccccCc
Confidence 45567778899999877665 6 99999999999999998864332 231 247899888887665544433322
Q ss_pred --------------EEEEeeCCCC---CccCHHHHHHhhc----cCcEEEEEecCCC-CCccccC----HHHHHHHHHHc
Q 013675 249 --------------KLWRVPVDKE---FRADVKAIKKYIN----RNTVLIVGSAPGF-PHGIIDP----IQELGELALSH 302 (438)
Q Consensus 249 --------------~v~~v~~~~~---~~~d~~~Le~~I~----~~t~~vv~~~~~~-~tG~idd----i~~I~~la~~~ 302 (438)
.+..+|.+.. +..|+++|+++++ +++++|+++.+++ ++|.+.+ +++|+++|++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~ 224 (430)
T 3i4j_A 145 GARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEA 224 (430)
T ss_dssp -----------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHH
T ss_pred cccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHc
Confidence 3334444332 3457899999997 4567777777777 8898776 99999999999
Q ss_pred CCeEEEeccccchhhhhhhhcCCCCCCCccCCC-C--ccEEEeCCCCCCCCC-CCcEEEEEeccccc
Q 013675 303 GTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQ-G--VTSISVDVHKYGLAP-KGTSVVLYRNREIR 365 (438)
Q Consensus 303 ~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~-g--vdsis~s~hK~~~~p-~g~g~l~~r~~~~~ 365 (438)
|+++|+|++|.++... |. .+..... + .|+++++ |.+.++ ..+|+++.+ +++.
T Consensus 225 ~~~li~DEv~~~~~~~-----g~---~~~~~~~~~~~~di~t~s--K~l~~G~~r~G~~~~~-~~i~ 280 (430)
T 3i4j_A 225 GIIFIADEVMSGMGRC-----GS---PLALSRWSGVTPDIAVLG--KGLAAGYAPLAGLLAA-PQVY 280 (430)
T ss_dssp TCEEEEECTTTTTTTT-----SS---SSGGGGTTTCCCSEEEEC--GGGTTTSSCCEEEEEC-HHHH
T ss_pred CCEEEEechhhCCCcc-----cc---hhhhhhhcCCCCcEEEEc--ccccCCccccEEEEEC-HHHH
Confidence 9999999999876431 11 1111112 2 4677665 885444 457887775 4443
No 201
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.63 E-value=4.2e-14 Score=142.52 Aligned_cols=220 Identities=15% Similarity=0.054 Sum_probs=140.3
Q ss_pred HHHHHHHHHHHHhCCC-CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcC-cHHHHHhhc---
Q 013675 172 FEAEVIAMTAALLGNK-EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS-AYDKAAQYF--- 246 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~-~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~-s~~~a~~~~--- 246 (438)
...++.+.+++++|.+ +++ + ++|+||++|+..++++++.. .| ++|+++.+.+. ....++...
T Consensus 87 ~~~~l~~~la~~~~~~~~~~----v--~~~~gg~ea~~~ai~~~~~~----~~---~~vi~~~p~yh~~~~~~~~~~~~~ 153 (419)
T 2eo5_A 87 PQLELAKKLVTYSPGNFQKK----V--FFSNSGTEAIEASIKVVKNT----GR---KYIIAFLGGFHGRTFGSISLTASK 153 (419)
T ss_dssp HHHHHHHHHHHHSSCSSCEE----E--EEESSHHHHHHHHHHHHHTT----SC---CEEEEETTCCCCSSHHHHHHCCSC
T ss_pred HHHHHHHHHHHhCCCCcCCE----E--EEeCchHHHHHHHHHHHHHh----hC---CcEEEECCCcCCCCHhhHhhcCCc
Confidence 3456677899999987 554 6 99999999999999987631 24 78988887654 444444321
Q ss_pred ----------CcEEEEeeCCCCCc----------------cCHHHHH-Hhhc-----cCcEEEEEecCCCCCccccC---
Q 013675 247 ----------NIKLWRVPVDKEFR----------------ADVKAIK-KYIN-----RNTVLIVGSAPGFPHGIIDP--- 291 (438)
Q Consensus 247 ----------Gi~v~~v~~~~~~~----------------~d~~~Le-~~I~-----~~t~~vv~~~~~~~tG~idd--- 291 (438)
+.+++.+|.+.+++ +|+++|+ ++++ +++++|+++..++++|.+.+
T Consensus 154 ~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~ 233 (419)
T 2eo5_A 154 AVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKN 233 (419)
T ss_dssp GGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTT
T ss_pred cccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHH
Confidence 13678888765433 4789999 9987 45666666555567898665
Q ss_pred -HHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCC-CCcEEEEEecccccccch
Q 013675 292 -IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQF 369 (438)
Q Consensus 292 -i~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p-~g~g~l~~r~~~~~~~~~ 369 (438)
+++|.++|++||+++|+|++|+++... |. .-.++......|+++++ |.+.++ .++|+++.+++ +. . +
T Consensus 234 ~l~~l~~l~~~~~~~li~DE~~~~~g~~-----g~-~~~~~~~~~~~d~~t~s--K~~~~G~~riG~~~~~~~-~~-~-~ 302 (419)
T 2eo5_A 234 FFAELQKLAKKYGILLVDDEVQMGLGRT-----GK-LFAIENFNTVPDVITLA--KALGGGIMPIGATIFRKD-LD-F-K 302 (419)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTTTTT-----SS-SSGGGGGTCCCSEEEEC--GGGGTTTSCCEEEEEEGG-GC-C-C
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCccC-----cc-hhhHHhcCCCCCEEEec--ccccCCccceEEEEEchH-hh-c-C
Confidence 999999999999999999999876431 10 00011112234777654 775555 78899888754 32 1 1
Q ss_pred hcccccCCCccCCCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 370 VAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 370 ~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
. ...++ +.. -+....+++.++++.+ ++..++..++.+++.+.|+++
T Consensus 303 ~---~~~~~-----t~~--~n~~~~~aa~aal~~~-----~~~~~~~~~~~~~l~~~L~~~ 348 (419)
T 2eo5_A 303 P---GMHSN-----TFG--GNALACAIGSKVIDIV-----KDLLPHVNEIGKIFAEELQGL 348 (419)
T ss_dssp --------------CCC--CCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHTTS
T ss_pred C---cccCC-----CCC--CCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHh
Confidence 1 00000 110 0111223444444432 236788888999999999775
No 202
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.63 E-value=5.5e-14 Score=143.02 Aligned_cols=174 Identities=18% Similarity=0.173 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCC-CCCeEEecCCCcCcHHHHHhhcCc
Q 013675 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAYDKAAQYFNI 248 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~-~~~~Viv~~~~h~s~~~a~~~~Gi 248 (438)
.+...++.++++++++.+.+ + ++|+|||+|+..|+++++.+.... |. .+++|++..+.|......+...+.
T Consensus 90 ~~~~~~la~~l~~~~~~~~~-----v--~~~~ggseA~~~al~~~~~~~~~~-g~~~~~~vi~~~~~yhg~~~~~~~~~~ 161 (452)
T 3n5m_A 90 HEPAIKLAEKLNEWLGGEYV-----I--FFSNSGSEANETAFKIARQYYAQK-GEPHRYKFMSRYRGYHGNTMATMAATG 161 (452)
T ss_dssp EHHHHHHHHHHHHHHTSCEE-----E--EEESSHHHHHHHHHHHHHHHHHTT-TCTTCCEEEEETTCCCCSSHHHHHSCC
T ss_pred CHHHHHHHHHHHHhCCCCce-----E--EEeCchHHHHHHHHHHHHHHHHhc-CCCCCCEEEEECCCcCCCCHHHHhcCC
Confidence 34566788889999886543 4 899999999999999998653322 11 237898888876654433333221
Q ss_pred -------------EEEEeeCCCCCc------------cCHHHHHHhhc----cCcEEEEEecC-CCCCccccC----HHH
Q 013675 249 -------------KLWRVPVDKEFR------------ADVKAIKKYIN----RNTVLIVGSAP-GFPHGIIDP----IQE 294 (438)
Q Consensus 249 -------------~v~~v~~~~~~~------------~d~~~Le~~I~----~~t~~vv~~~~-~~~tG~idd----i~~ 294 (438)
.+..++.....+ .++++|+++++ +++++|+++.+ +| +|.+.| +++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~ 240 (452)
T 3n5m_A 162 QAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKA 240 (452)
T ss_dssp CGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHH
T ss_pred chhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHH
Confidence 345555422111 11899999998 56788888888 79 998876 999
Q ss_pred HHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCC--ccEEEeCCCCCCCCC-CCcEEEEEecc
Q 013675 295 LGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAP-KGTSVVLYRNR 362 (438)
Q Consensus 295 I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~g--vdsis~s~hK~~~~p-~g~g~l~~r~~ 362 (438)
|+++|++||+++++|++|.++... |. .+.....+ .|+++++ |.+.++ .++|+++.+++
T Consensus 241 l~~l~~~~~~llI~DEv~~g~g~~-----g~---~~~~~~~~~~~di~t~s--K~l~~G~~~ig~~~~~~~ 301 (452)
T 3n5m_A 241 VHETCQKHGALLISDEVICGFGRT-----GK---AFGFMNYDVKPDIITMA--KGITSAYLPLSATAVKRE 301 (452)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTTT-----SS---SSGGGGTTCCCSEEEEC--GGGGTTSSCCEEEEEEHH
T ss_pred HHHHHHHcCCEEEEecchhCCCcc-----cc---cchhhhcCCCCCEEeec--ccccCCCcceEEEEECHH
Confidence 999999999999999999876431 11 11122222 4777765 775444 67898877643
No 203
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.63 E-value=6.5e-14 Score=140.69 Aligned_cols=193 Identities=12% Similarity=0.071 Sum_probs=136.3
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcC
Q 013675 160 PLHLDIFQSVARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS 237 (438)
Q Consensus 160 ~~~~~~~~~~~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~ 237 (438)
..+|....|..++.+.+.+++.+..+.. +++ +..++|.|+++|+.+++.++.+. . . |+|+++.++|+
T Consensus 65 ~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~----i~i~~t~G~~~al~~~~~~l~~~-----~-~-d~Vlv~~P~y~ 133 (405)
T 3k7y_A 65 EKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKK----ICTIQCIGGTGAIFVLLEFLKML-----N-V-ETLYVTNPPYI 133 (405)
T ss_dssp CCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTC----EEEEEEEHHHHHHHHHHHHHHTT-----T-C-CEEEEESSCCH
T ss_pred CCCCCCCCCcHHHHHHHHHHHcCCCCccccccc----eEEEEcCchHHHHHHHHHHHHhc-----C-C-CEEEEeCCCCH
Confidence 3456667788888888888875444332 221 22378999999999999887631 1 2 79999999999
Q ss_pred cHHHHHhhcCcEEEEeeC-CC-CCccCHHHHHHhhcc--CcEEEEEecC-CCCCccccC---HHHHHHHHHHcCCeEEEe
Q 013675 238 AYDKAAQYFNIKLWRVPV-DK-EFRADVKAIKKYINR--NTVLIVGSAP-GFPHGIIDP---IQELGELALSHGTCLHVD 309 (438)
Q Consensus 238 s~~~a~~~~Gi~v~~v~~-~~-~~~~d~~~Le~~I~~--~t~~vv~~~~-~~~tG~idd---i~~I~~la~~~~i~lhVD 309 (438)
.+..+++..|.+++.+|+ ++ ++.+|+++|++++++ ++++++++.+ +||||.+.+ +++|+++|++|++++++|
T Consensus 134 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~D 213 (405)
T 3k7y_A 134 NHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFD 213 (405)
T ss_dssp HHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEE
T ss_pred hHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEe
Confidence 999999999999999998 44 689999999999974 5677777665 899999976 667889999999999999
Q ss_pred ccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCC-CCCCcEEEEE--ecccc
Q 013675 310 LCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGL-APKGTSVVLY--RNREI 364 (438)
Q Consensus 310 ~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~-~p~g~g~l~~--r~~~~ 364 (438)
.+|..+...-.+.....+..+. ....-.++..++.|... .+..+|+++. .++++
T Consensus 214 e~Y~~l~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~ 270 (405)
T 3k7y_A 214 IAYQGFGHTNLEEDVLLIRKFE-EKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEE 270 (405)
T ss_dssp ESCTTTSSSSTTGGGHHHHHHH-TTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHH
T ss_pred cCcccccCCCcccchHHHHHHH-hcCCcEEEEeeCCccCCCccccceEEEEEeCCHHH
Confidence 9998654210000000000010 11122466778899953 5667999764 34443
No 204
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.63 E-value=3.8e-14 Score=143.91 Aligned_cols=223 Identities=17% Similarity=0.106 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCC--CCeEEecCCC-cCcHHHHHhhcC--
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGIT--RPEMIIPVSA-HSAYDKAAQYFN-- 247 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~--~~~Viv~~~~-h~s~~~a~~~~G-- 247 (438)
..++.+.+++++|. +. + ++|+||++|+..++++++.+....+|.. +++|++.++. |.....++...|
T Consensus 120 ~~~l~~~la~~~g~--~~----v--~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~ 191 (439)
T 2oat_A 120 LGEYEEYITKLFNY--HK----V--LPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDP 191 (439)
T ss_dssp HHHHHHHHHHHHTC--SE----E--EEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCH
T ss_pred HHHHHHHHHHhcCC--CE----E--EEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCCh
Confidence 44556677777774 22 5 8999999999999999886443333331 3678887766 455555555544
Q ss_pred ----------cEEEEeeCCCCCccCHHHHHHhh-ccCcEEEEEecCCCCCcccc----CHHHHHHHHHHcCCeEEEeccc
Q 013675 248 ----------IKLWRVPVDKEFRADVKAIKKYI-NRNTVLIVGSAPGFPHGIID----PIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 248 ----------i~v~~v~~~~~~~~d~~~Le~~I-~~~t~~vv~~~~~~~tG~id----di~~I~~la~~~~i~lhVD~a~ 312 (438)
.+++.+|.+ |+++|++++ ++++++|+++..++++|.+. ++++|.++|++||+++++|+++
T Consensus 192 ~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~ 266 (439)
T 2oat_A 192 TSYDGFGPFMPGFDIIPYN-----DLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQ 266 (439)
T ss_dssp HHHTTSCSCCTTEEEECSS-----CHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTT
T ss_pred hcccCCCCCCCCeEEeCCC-----CHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 466677653 899999999 46788888877777789765 6999999999999999999999
Q ss_pred cchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCC-CCcEEEEEecccccccchhcccccCCCccCCCCccCCCCC
Q 013675 313 GGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPG 391 (438)
Q Consensus 313 gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p-~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~ 391 (438)
.|+.. .|... .++......|++++ +|.+.++ ..+|+++.++ ++.+... ....+ .+..+ +.
T Consensus 267 ~g~g~-----~g~~~-~~~~~~~~~Di~t~--sK~l~~G~~~~G~v~~~~-~~~~~l~---~~~~~-----~t~~~--~~ 327 (439)
T 2oat_A 267 TGLAR-----TGRWL-AVDYENVRPDIVLL--GKALSGGLYPVSAVLCDD-DIMLTIK---PGEHG-----STYGG--NP 327 (439)
T ss_dssp TTTTT-----TSSSS-GGGGGTCCCSEEEE--CGGGGTTSSCCEEEEECH-HHHTTSC---TTSSC-----CSSTT--CH
T ss_pred cCCcc-----CCcch-hHHHhCCCCcEEEe--cccccCCCCCeEEEEECH-HHHhccC---CCCcc-----cCCCc--CH
Confidence 76532 11100 01111123587754 5985544 4589888875 3332110 00001 11111 11
Q ss_pred chHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 392 GLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 392 ~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
...+++.++++.+.. ++..++..++++++.+.|+++
T Consensus 328 ~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l 363 (439)
T 2oat_A 328 LGCRVAIAALEVLEE---ENLAENADKLGIILRNELMKL 363 (439)
T ss_dssp HHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh
Confidence 123344455554432 256778888999999999876
No 205
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.63 E-value=1.6e-14 Score=143.24 Aligned_cols=240 Identities=13% Similarity=0.107 Sum_probs=162.1
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCCCCCCccce--eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc---HH
Q 013675 166 FQSVARFEAEVIAMTAALLGNKEKASGGQVCG--NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA---YD 240 (438)
Q Consensus 166 ~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g--~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s---~~ 240 (438)
...+.++|.-+++..+++||++..+ +| +-..+|+.||+.+..++.+ +| |+|+..+..|.. .-
T Consensus 95 ce~vD~iE~la~~rak~lF~a~~A~-----w~VNVQP~SGs~AN~avy~All~-----PG---D~ilg~~l~~GGHltHg 161 (490)
T 3ou5_A 95 AEVVDEIELLCQRRALEAFDLDPAQ-----WGVNVQPYSGSPANLAVYTALLQ-----PH---DRIMGLDLPDGGHLTHG 161 (490)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCTTT-----EEEECCCSSHHHHHHHHHHHHCC------C---CCEECBC----------
T ss_pred ChHHHHHHHHHHHHHHHHhCCCccc-----cCCCCCcCCHHHHHHHHHHHHcC-----CC---CEEEecccCCCCccccc
Confidence 4457788999999999999999875 43 5678999999999999874 88 899876665433 22
Q ss_pred -----HHHhhcCc--EEEEeeCCC-CCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEecc
Q 013675 241 -----KAAQYFNI--KLWRVPVDK-EFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (438)
Q Consensus 241 -----~a~~~~Gi--~v~~v~~~~-~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a 311 (438)
+.....|. +....++|+ ++.+|.+++++...+ +|++|++-.-.+ -...|++++.+||++.|.++++|.+
T Consensus 162 ~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~SaY--~r~id~~~~reIAd~vGA~Lm~DmA 239 (490)
T 3ou5_A 162 YMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAY--ARLIDYARMREVCDEVKAHLLADMA 239 (490)
T ss_dssp ------------------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECG
T ss_pred ccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCccC--ccccCHHHHHHHHhhcccEEEechh
Confidence 11222233 444555664 899999999998764 799998766554 4577999999999999999999999
Q ss_pred ccchhhhhhhhcCCCCC-CCccCCCCccEEEeCCCCCCCCCCCcEEEEEeccccccc---------chhcccccCCCccC
Q 013675 312 LGGFVLPFAKKLGYPIP-PFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKH---------QFVAVTEWSGGLYV 381 (438)
Q Consensus 312 ~gg~~~pf~~~~g~~~p-~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~---------~~~~~~~~~g~~~~ 381 (438)
+-.+++. .|. .| |+ +.+|+++.++||.+.||.| |+|+++++..... .+...-+ ...
T Consensus 240 HiaGLVA----~g~-~psP~----~~ADvVTtTTHKTLrGPrG-G~Il~~~~~~~~~~k~~~~~~~~~~kkin----~aV 305 (490)
T 3ou5_A 240 HISGLVA----AKV-IPSPF----KHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRIN----FAV 305 (490)
T ss_dssp GGHHHHH----TTS-SCCGG----GTCSEEEEESSSTTCSCSC-EEEEEECSEEEECC--CCEEECCCHHHHH----HHH
T ss_pred hhhhhhc----ccc-cCCcc----ccceEEeccccccccCCCc-eEEEeccccccccccccchhHHHHHHHHH----hhc
Confidence 8776662 332 21 33 3479999999999989986 8888886421000 0000000 001
Q ss_pred CCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 382 SPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 382 ~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
-|.++|...-..+++...+++..-...+++..++..++|+.|++.|.+. |+++
T Consensus 306 FPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~v 358 (490)
T 3ou5_A 306 FPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSL 358 (490)
T ss_dssp TTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred CccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCee
Confidence 1233444444457777777766556678999999999999999999886 6665
No 206
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.62 E-value=4.1e-14 Score=143.38 Aligned_cols=224 Identities=17% Similarity=0.055 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCC--CCeEEecCCCcCc-HHHHHhhcC-
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGIT--RPEMIIPVSAHSA-YDKAAQYFN- 247 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~--~~~Viv~~~~h~s-~~~a~~~~G- 247 (438)
...++.+.+++++|. +. + ++|+|||+|+..++++++.+....+|+. +++|+++++.|.. ...++...|
T Consensus 108 ~~~~l~~~la~~~g~--~~----v--~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~ 179 (433)
T 1z7d_A 108 PLGICERYLTNLLGY--DK----V--LMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTT 179 (433)
T ss_dssp HHHHHHHHHHHHHTC--SE----E--EEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------
T ss_pred HHHHHHHHHHhhcCC--Ce----E--EEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCC
Confidence 445666778888874 23 5 8999999999999999875433223331 3788888876544 444444433
Q ss_pred -----------cEEEEeeCCCCCccCHHHHHHhh-ccCcEEEEEecCCCCCcccc----CHHHHHHHHHHcCCeEEEecc
Q 013675 248 -----------IKLWRVPVDKEFRADVKAIKKYI-NRNTVLIVGSAPGFPHGIID----PIQELGELALSHGTCLHVDLC 311 (438)
Q Consensus 248 -----------i~v~~v~~~~~~~~d~~~Le~~I-~~~t~~vv~~~~~~~tG~id----di~~I~~la~~~~i~lhVD~a 311 (438)
.+++.+|.+ |+++|++++ ++++++|+++..++++|.+. ++++|.++|++||+++++|++
T Consensus 180 ~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 254 (433)
T 1z7d_A 180 KKCTSNFGPFAPQFSKVPYD-----DLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEV 254 (433)
T ss_dssp ------------CEEEECTT-----CHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECT
T ss_pred ccccccCCCCCCCeEEeCCC-----CHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecC
Confidence 245556543 899999999 57788888877777789865 699999999999999999999
Q ss_pred ccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCC-CCcEEEEEecccccccchhcccccCCCccCCCCccCCCC
Q 013675 312 LGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRP 390 (438)
Q Consensus 312 ~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p-~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~ 390 (438)
++|+.. .|... .++......|++++ .|.+.++ ..+|+++.++ ++.+... ....+. +..+ +
T Consensus 255 ~~g~g~-----~g~~~-~~~~~~~~~di~t~--sK~l~~G~~~~G~v~~~~-~~~~~l~---~~~~~~-----t~~~--~ 315 (433)
T 1z7d_A 255 QTGLGR-----TGKLL-CVHHYNVKPDVILL--GKALSGGHYPISAVLAND-DIMLVIK---PGEHGS-----TYGG--N 315 (433)
T ss_dssp TTTTTT-----TSSSS-GGGGGTCCCSEEEE--CGGGGTTSSCCEEEEECH-HHHTTCC---TTCCCC-----TTTT--C
T ss_pred ccCCCc-----CCcch-hhHhcCCCCCEEEE--CccccCCCCCeEEEEECH-HHHhhhc---cccccc-----cCCC--C
Confidence 986532 11100 01111123587755 5985544 3589888765 3332110 000011 1111 1
Q ss_pred CchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 391 GGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 391 ~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
....++..++++.+.. .+..++..++++++.+.|+++
T Consensus 316 ~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l 352 (433)
T 1z7d_A 316 PLAASICVEALNVLIN---EKLCENAEKLGGPFLENLKRE 352 (433)
T ss_dssp HHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 1113344455554432 245677778888888888754
No 207
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.62 E-value=2.1e-14 Score=145.89 Aligned_cols=237 Identities=19% Similarity=0.151 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCC-CCCeEEecCCCcC-cHHHHHhhcCc
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHS-AYDKAAQYFNI 248 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~-~~~~Viv~~~~h~-s~~~a~~~~Gi 248 (438)
+...++.+.++++++.+.+. + ++|+|||+|+.+++++++.+... +|- .+++|++..+.|. ....++...|.
T Consensus 93 ~~~~~l~~~la~~~~~~~~~----v--~~~~ggsea~~~al~~~~~~~~~-~g~~~~~~vi~~~~~yhg~~~~~~~~~g~ 165 (449)
T 3a8u_X 93 PLSFQLAEKITDLTPGNLNH----V--FFTDSGSECALTAVKMVRAYWRL-KGQATKTKMIGRARGYHGVNIAGTSLGGV 165 (449)
T ss_dssp HHHHHHHHHHHTTSSTTEEE----E--EEESSHHHHHHHHHHHHHHHHHH-TTCTTCCEEEEETTCCCCSSHHHHHHCCC
T ss_pred HHHHHHHHHHHHhCCCCCCE----E--EEcCcHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCcCCCChhhhhccCC
Confidence 34556777888888766554 6 89999999999999998764432 221 1378888766654 44555554431
Q ss_pred ------------EEEEeeCCCCC-----ccC--------HHHHHHhhc----cCcEEEEEecCCCCCccccC----HHHH
Q 013675 249 ------------KLWRVPVDKEF-----RAD--------VKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQEL 295 (438)
Q Consensus 249 ------------~v~~v~~~~~~-----~~d--------~~~Le~~I~----~~t~~vv~~~~~~~tG~idd----i~~I 295 (438)
.++.++++..+ .+| +++|+++|+ +++++|+++..++++|.+.| +++|
T Consensus 166 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l 245 (449)
T 3a8u_X 166 NGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRN 245 (449)
T ss_dssp HHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHH
T ss_pred hhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHH
Confidence 35556554222 246 999999997 46777777766677998877 9999
Q ss_pred HHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCC--CCccEEEeCCCCCCCCC-CCcEEEEEecccccccchhcc
Q 013675 296 GELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSV--QGVTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAV 372 (438)
Q Consensus 296 ~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~--~gvdsis~s~hK~~~~p-~g~g~l~~r~~~~~~~~~~~~ 372 (438)
.++|++||+++++|++++++... |. .+.... ...|+++++ |.+.++ ..+|+++.++ ++.+......
T Consensus 246 ~~l~~~~~~~li~Dev~~~~g~~-----g~---~~~~~~~~~~~di~s~s--K~l~~G~~~~G~~~~~~-~~~~~l~~~~ 314 (449)
T 3a8u_X 246 REICNQHNILLVFDEVITGFGRT-----GS---MFGADSFGVTPDLMCIA--KQVTNGAIPMGAVIAST-EIYQTFMNQP 314 (449)
T ss_dssp HHHHHHHTCEEEEECTTTTTTTT-----SS---SSHHHHHTCCCSEEEEC--GGGGTTSSCCEEEEEEH-HHHHHHHTCS
T ss_pred HHHHHHhCCEEEEeccccCcccc-----Cc---chhhhhcCCCCCEEEEc--ccccCCCCceEEEEECH-HHHHHhhccC
Confidence 99999999999999999765421 10 111111 124777554 884432 3388888764 4332211100
Q ss_pred cccCCCccCCCCccCCCCCc--hHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 013675 373 TEWSGGLYVSPTVAGSRPGG--LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLFP 431 (438)
Q Consensus 373 ~~~~g~~~~~~~~~gsr~~~--~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~ 431 (438)
..+....+ ...++-.+. ..+++.++++.+.. .+..++..++.+++++.|++++
T Consensus 315 ~~~~~~~~---~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~ 369 (449)
T 3a8u_X 315 TPEYAVEF---PHGYTYSAHPVACAAGLAALCLLQK---ENLVQSVAEVAPHFEKALHGIK 369 (449)
T ss_dssp SCTTSCSS---CCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccccc---cccCCCcccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHh
Confidence 00000000 001111111 13344445544422 2466778888889999887754
No 208
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.62 E-value=9.5e-15 Score=147.97 Aligned_cols=172 Identities=11% Similarity=0.027 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCC-cCcHHHHHhhcC
Q 013675 170 ARFEAEVIAMTAALLGNKE-KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSA-HSAYDKAAQYFN 247 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~~-~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~-h~s~~~a~~~~G 247 (438)
.+...++.++++++++.+. ++ + ++|+||++|+..++++++... ++ ++|++.+.. |.....+....|
T Consensus 85 ~~~~~~l~~~la~~~~~~~~~~----v--~~~~ggsea~~~al~~~~~~~---~~---~~vi~~~~~yhg~~~~~~~~~~ 152 (439)
T 3dxv_A 85 NAPAVTLAERLLASFPGEGTHK----I--WFGHSGSDANEAAYRAIVKAT---GR---SGVIAFAGAYHGCTVGSMAFSG 152 (439)
T ss_dssp EHHHHHHHHHHHHTTTCTTTEE----E--EEESSHHHHHHHHHHHHHHHH---SC---CEEEEETTCCCCSSHHHHCC--
T ss_pred CHHHHHHHHHHHHhCCCCCCCE----E--EEeCCHHHHHHHHHHHHHHHh---CC---CEEEEECCCCCCCcHHHHhhcC
Confidence 4566778889999986654 34 5 899999999999999976431 22 567666555 455555544433
Q ss_pred cE--------------EEEeeCCCCCcc-----CHHHHHHhh----ccCcEEEEEecCCCCCccccC----HHHHHHHHH
Q 013675 248 IK--------------LWRVPVDKEFRA-----DVKAIKKYI----NRNTVLIVGSAPGFPHGIIDP----IQELGELAL 300 (438)
Q Consensus 248 i~--------------v~~v~~~~~~~~-----d~~~Le~~I----~~~t~~vv~~~~~~~tG~idd----i~~I~~la~ 300 (438)
.. +..+|.+..+.. |+++|++++ .+++++|+++.+++++|.+.| +++|.++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~ 232 (439)
T 3dxv_A 153 HSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICR 232 (439)
T ss_dssp -----------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHH
T ss_pred CCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 32 233444322222 799999999 567889999999999999988 999999999
Q ss_pred HcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEec
Q 013675 301 SHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRN 361 (438)
Q Consensus 301 ~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~ 361 (438)
+||+++++|++|+++... |... ..+......|++++ .|.+.++..+|+++.++
T Consensus 233 ~~~~~li~DE~~~g~g~~-----g~~~-~~~~~~~~~di~s~--sK~~~~G~riG~~~~~~ 285 (439)
T 3dxv_A 233 AHGILVVCDEVKVGLARS-----GRLH-CFEHEGFVPDILVL--GKGLGGGLPLSAVIAPA 285 (439)
T ss_dssp HTTCEEEEECTTTCTTTT-----SSSS-GGGGTTCCCSEEEE--CGGGGTTSCCEEEEEEH
T ss_pred HcCCEEEEeccccCCCcC-----chhh-HHHhcCCCCCEEEE--cchhcCCcceEEEEECH
Confidence 999999999999875321 1100 11111223477755 48855445679887764
No 209
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.61 E-value=5.6e-14 Score=142.92 Aligned_cols=175 Identities=14% Similarity=0.152 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCC-CCCeEEecCCCcCcHHHHHhhc-C-
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAYDKAAQYF-N- 247 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~-~~~~Viv~~~~h~s~~~a~~~~-G- 247 (438)
+...++.++++++++.+.+. + ++|+|||+|+..|+++++..... +|. .+++|++..++|......+... |
T Consensus 87 ~~~~~la~~l~~~~~~~~~~----v--~~~~sGseA~~~al~~~~~~~~~-~G~~~~~~vi~~~~~yhg~~~~~~~~~~~ 159 (448)
T 3dod_A 87 VPATQLAETLIDISPKKLTR----V--FYSDSGAEAMEIALKMAFQYWKN-IGKPEKQKFIAMKNGYHGDTIGAVSVGSI 159 (448)
T ss_dssp HHHHHHHHHHHHHSCTTEEE----E--EEESSHHHHHHHHHHHHHHHHHH-TTCTTCCEEEEEC----------------
T ss_pred HHHHHHHHHHHHhCCCCCCE----E--EEeCchHHHHHHHHHHHHHHHHh-hCCCCCCEEEEECCCCCCccHHHHHhcCC
Confidence 45567778899998765544 6 89999999999999999865332 221 1378998888865543222222 1
Q ss_pred -----------cEEEEeeCCCCCcc-----------CHHHHHHhhc---cCcEEEEEecCC-CCCccccC----HHHHHH
Q 013675 248 -----------IKLWRVPVDKEFRA-----------DVKAIKKYIN---RNTVLIVGSAPG-FPHGIIDP----IQELGE 297 (438)
Q Consensus 248 -----------i~v~~v~~~~~~~~-----------d~~~Le~~I~---~~t~~vv~~~~~-~~tG~idd----i~~I~~ 297 (438)
..+..+|.+..++. |+++|+++|+ +++++|+++..+ ++.|.+.+ +++|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~ 239 (448)
T 3dod_A 160 ELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRE 239 (448)
T ss_dssp -------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHH
T ss_pred ccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHH
Confidence 13445555433333 5899999997 457788887777 88887765 999999
Q ss_pred HHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCC--ccEEEeCCCCCCCCC-CCcEEEEEecc
Q 013675 298 LALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAP-KGTSVVLYRNR 362 (438)
Q Consensus 298 la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~g--vdsis~s~hK~~~~p-~g~g~l~~r~~ 362 (438)
+|++||+++++|++++++... |. .+.....+ .|+++++ |.+.++ ..+|+++.+++
T Consensus 240 l~~~~~~~lI~DEv~~g~g~~-----g~---~~a~~~~~~~~di~t~s--K~l~~G~~~ig~v~~~~~ 297 (448)
T 3dod_A 240 LCTTYDVLMIVDEVATGFGRT-----GK---MFACEHENVQPDLMAAG--KGITGGYLPIAVTFATED 297 (448)
T ss_dssp HHHHTTCEEEEECTTTTTTTT-----SS---SSGGGGGTCCCSEEEEC--GGGGTTSSCCEEEEEEHH
T ss_pred HHHHhCCEEEEeccccCCCcc-----cc---hhhhhhcCCCCCEEEec--ccccCCcCceEEEEECHH
Confidence 999999999999999876431 11 11112222 4777765 886555 36788877643
No 210
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.60 E-value=1.3e-14 Score=148.18 Aligned_cols=236 Identities=14% Similarity=0.041 Sum_probs=142.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcC-CCCCeEEecCCCcCcHHHHHhhc---
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRG-ITRPEMIIPVSAHSAYDKAAQYF--- 246 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G-~~~~~Viv~~~~h~s~~~a~~~~--- 246 (438)
+...+++++++++++.+.+. + ++|+|||+|+..|+++++.+... +| ..+++|++....|......+...
T Consensus 118 ~~~~~L~e~la~~~~~~~~~----v--~~~~sGseA~~~Alk~a~~~~~~-~g~~g~~~ii~~~~~yhg~~~~~~~~~~~ 190 (457)
T 3tfu_A 118 EPAARLAKLLVDITPAGLDT----V--FFSDSGSVSVEVAAKMALQYWRG-RGLPGKRRLMTWRGGYHGDTFLAMSICDP 190 (457)
T ss_dssp HHHHHHHHHHHHHSSTTEEE----E--EEESSHHHHHHHHHHHHHHHHHH-TTCTTCCEEEEETTCCCCSSHHHHTTSCC
T ss_pred HHHHHHHHHHHHhCCCCcCE----E--EEeCcHHHHHHHHHHHHHHHHHh-cCCCCCceEEEEcCCcCCccHHhhcccCC
Confidence 34557778899999766554 6 89999999999999999875433 23 12457877766654433222222
Q ss_pred -----------CcEEEEeeCCC--CCccCHHHHHHhhc---cCcEEEEEec-CCCCCccccC----HHHHHHHHHHcCCe
Q 013675 247 -----------NIKLWRVPVDK--EFRADVKAIKKYIN---RNTVLIVGSA-PGFPHGIIDP----IQELGELALSHGTC 305 (438)
Q Consensus 247 -----------Gi~v~~v~~~~--~~~~d~~~Le~~I~---~~t~~vv~~~-~~~~tG~idd----i~~I~~la~~~~i~ 305 (438)
...+..+|... ....|+++|+++|+ +++++|++.. +++++|.+.+ +++|.++|++||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gil 270 (457)
T 3tfu_A 191 HGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVL 270 (457)
T ss_dssp C----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCE
T ss_pred cccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 11334444432 23368999999998 6788898888 8999998876 99999999999999
Q ss_pred EEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCC-CCcEEEEEecccccccchhcccccCCCccCCCC
Q 013675 306 LHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPT 384 (438)
Q Consensus 306 lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p-~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~ 384 (438)
+++|+++.|+.. .|... .++......|+++++ |.+.++ ..+|+++.+++ +.+...... .+. .
T Consensus 271 lI~DEv~~g~gr-----~G~~~-a~~~~~~~pdiit~s--K~l~gG~~~lG~v~~~~~-i~~~~~~~~---~~~-----~ 333 (457)
T 3tfu_A 271 LIFDEIATGFGR-----TGALF-AADHAGVSPDIMCVG--KALTGGYLSLAATLCTAD-VAHTISAGA---AGA-----L 333 (457)
T ss_dssp EEEECTTTTTTT-----TSSSS-THHHHTCCCSEEEEC--GGGGTTSSCCEEEEEEHH-HHHHHHHSS---SCS-----C
T ss_pred EEEEcCccCCcc-----ccchh-HhHhcCCCceEEEEC--hhhhCCCcceEEEEEcHH-HHHHhhccC---CCc-----e
Confidence 999999987643 11100 111111234777665 875444 46888887754 322110000 010 0
Q ss_pred ccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 385 VAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 385 ~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
..++..+....++.+++..+..-.-++..++..++.+++++.|+++
T Consensus 334 ~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l 379 (457)
T 3tfu_A 334 MHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTA 379 (457)
T ss_dssp CCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGG
T ss_pred eEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 1111111122233343333321111345667777888888888764
No 211
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.60 E-value=2.4e-14 Score=146.77 Aligned_cols=175 Identities=14% Similarity=0.114 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCC-CCCeEEecCCCcCcHHHHHhhcCc-
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAYDKAAQYFNI- 248 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~-~~~~Viv~~~~h~s~~~a~~~~Gi- 248 (438)
+...++.+.++++++.+.+. + ++++||++|+..|+++++.+... +|. .+++||+...+|......+...+.
T Consensus 99 ~~~~~lae~l~~~~~~~~~~----v--~~~~sGseA~~~aik~a~~~~~~-~g~~~~~~ii~~~~~yHg~t~~~~~~~~~ 171 (472)
T 3hmu_A 99 VPAIALAQKLAELAPGDLNH----V--FFAGGGSEANDTNIRMVRTYWQN-KGQPEKTVIISRKNAYHGSTVASSALGGM 171 (472)
T ss_dssp HHHHHHHHHHHHHSCTTEEE----E--EEESSHHHHHHHHHHHHHHHHHH-TTCTTCCEEEEETTCCCCSSHHHHHHSCC
T ss_pred HHHHHHHHHHHHhCCCCCCE----E--EEeCCHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCcCCCccHHhhhccCC
Confidence 34556777888888765554 6 89999999999999999975443 232 246788877775554333332221
Q ss_pred -----------EEEEeeCCCCCc----cC--------HHHHHHhhc----cCcEEEEEecCCCCCccccC----HHHHHH
Q 013675 249 -----------KLWRVPVDKEFR----AD--------VKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQELGE 297 (438)
Q Consensus 249 -----------~v~~v~~~~~~~----~d--------~~~Le~~I~----~~t~~vv~~~~~~~tG~idd----i~~I~~ 297 (438)
.++.+|....++ .| +++|+++|+ +++++|++..++++.|.+.+ +++|.+
T Consensus 172 ~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~ 251 (472)
T 3hmu_A 172 AGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQR 251 (472)
T ss_dssp HHHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHH
T ss_pred hhhccccCCCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHH
Confidence 355566432111 34 788999986 56788888888888888877 999999
Q ss_pred HHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCC--CCccEEEeCCCCCCCCC-CCcEEEEEecc
Q 013675 298 LALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSV--QGVTSISVDVHKYGLAP-KGTSVVLYRNR 362 (438)
Q Consensus 298 la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~--~gvdsis~s~hK~~~~p-~g~g~l~~r~~ 362 (438)
+|++||+++++|+++.||... |. .+.... ...|+++++ |.+.++ ..+|+++.+++
T Consensus 252 l~~~~gillI~DEv~~gfgr~-----G~---~~a~~~~~v~pdi~t~s--K~l~gg~~plG~v~~~~~ 309 (472)
T 3hmu_A 252 ICDKYDILLIADEVICGFGRT-----GN---WFGTQTMGIRPHIMTIA--KGLSSGYAPIGGSIVCDE 309 (472)
T ss_dssp HHHHTTCEEEEECTTTTTTTT-----SS---SCHHHHHTCCCSEEEEC--GGGTTTSSCCEEEEEEHH
T ss_pred HHHHcCCEEEEEccccCCccc-----Cc---cchhHHhCCCCceeeec--hhhhcCCcceEEEEECHH
Confidence 999999999999999876431 10 111111 124788765 875444 46788877643
No 212
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.59 E-value=4.8e-14 Score=143.91 Aligned_cols=175 Identities=13% Similarity=0.073 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCC-CCCeEEecCCCcCcHHHHHhhc---
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAYDKAAQYF--- 246 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~-~~~~Viv~~~~h~s~~~a~~~~--- 246 (438)
+...++.++++++++.+.+. + ++|+||++|+..|+++++.+... +|. .+++|++...+|......+...
T Consensus 95 ~~~~~la~~l~~~~~~~~~~----v--~~~~gGseA~~~al~~~~~~~~~-~g~~~~~~vi~~~~~yhg~~~~~~~~~~~ 167 (460)
T 3gju_A 95 EASITLAKMIIDRAPKGMSR----V--YFGLSGSDANETNIKLIWYYNNV-LGRPEKKKIISRWRGYHGSGVMTGSLTGL 167 (460)
T ss_dssp HHHHHHHHHHHHHSCTTEEE----E--EEESSHHHHHHHHHHHHHHHHHH-TTCTTCCEEEEETTCCCCSSHHHHHHCCC
T ss_pred HHHHHHHHHHHhhCCCCcCE----E--EEeCchHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCcCCCCHHHhhccCC
Confidence 45667778889888766554 6 89999999999999999865432 232 2478888777765543333222
Q ss_pred ----------CcEEEEeeCCC-----CCccC--------HHHHHHhhc----cCcEEEEEecCCCCCccccC----HHHH
Q 013675 247 ----------NIKLWRVPVDK-----EFRAD--------VKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQEL 295 (438)
Q Consensus 247 ----------Gi~v~~v~~~~-----~~~~d--------~~~Le~~I~----~~t~~vv~~~~~~~tG~idd----i~~I 295 (438)
+..+..+|... +..++ +++|+++|+ +++++|++..+++++|.+.+ +++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l 247 (460)
T 3gju_A 168 DLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKI 247 (460)
T ss_dssp GGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHH
T ss_pred cccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHH
Confidence 12456666432 11223 689999987 56788888888888888665 9999
Q ss_pred HHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCC--CCccEEEeCCCCCCCCC-CCcEEEEEecc
Q 013675 296 GELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSV--QGVTSISVDVHKYGLAP-KGTSVVLYRNR 362 (438)
Q Consensus 296 ~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~--~gvdsis~s~hK~~~~p-~g~g~l~~r~~ 362 (438)
.++|++||+++++|++|+++... |. .+.... ...|+++++ |.+.++ ..+|+++.+++
T Consensus 248 ~~l~~~~~~llI~DEv~~g~gr~-----g~---~~~~~~~~~~pdi~t~s--K~l~gG~~~lg~v~~~~~ 307 (460)
T 3gju_A 248 QAVLKKYDVLLVADEVVTGFGRL-----GT---MFGSDHYGIKPDLITIA--KGLTSAYAPLSGVIVADR 307 (460)
T ss_dssp HHHHHHTTCEEEEECTTTTTTTT-----SS---SCHHHHHTCCCSEEEEC--GGGTTTSSCCEEEEEEHH
T ss_pred HHHHHHcCCEEEEeccccCCCcc-----cc---cchHhhcCCCCCeeeee--hhhcCCCCCeEEEEECHH
Confidence 99999999999999999876431 10 011111 124777765 885554 46788877653
No 213
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.58 E-value=1.2e-14 Score=145.18 Aligned_cols=228 Identities=13% Similarity=0.096 Sum_probs=147.2
Q ss_pred CCcccchhH-----HHHHHHHHHHHHHHhCCC--CCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCC----eE
Q 013675 161 LHLDIFQSV-----ARFEAEVIAMTAALLGNK--EKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRP----EM 229 (438)
Q Consensus 161 ~~~~~~~~~-----~~~e~~~~~~~a~l~g~~--~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~----~V 229 (438)
..|....+. .++++.+.+++. ..|.+ +++ ++ ++|+|+++++.++++++.+ +| + +|
T Consensus 57 ~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~---~i--~~t~G~~~al~~~~~~l~~-----~G---d~~~~~V 122 (391)
T 3bwn_A 57 SYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDR---YI--VVGTGSTQLCQAAVHALSS-----LA---RSQPVSV 122 (391)
T ss_dssp SSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSS---EE--EEEEHHHHHHHHHHHHHHH-----TS---SSSSEEE
T ss_pred hcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCC---eE--EEeCChHHHHHHHHHHhcC-----CC---CCCcceE
Confidence 344445555 667776666655 34443 321 26 8999999999999999864 67 7 99
Q ss_pred EecCCCcCcHHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEe
Q 013675 230 IIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVD 309 (438)
Q Consensus 230 iv~~~~h~s~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD 309 (438)
+++.+.|+.+..+++..|++++.+++|.++ ++ .++|++|++++|+||||.+.+ +|++.++++++++++|
T Consensus 123 lv~~P~y~~~~~~~~~~g~~~~~~~~d~~~-l~--------~~~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~D 191 (391)
T 3bwn_A 123 VAAAPFYSTYVEETTYVRSGMYKWEGDAWG-FD--------KKGPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHD 191 (391)
T ss_dssp EECSSCCTHHHHHHHTTCBTTEEEEEESTT-CC--------CCSCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEE
T ss_pred EEcCCCchhHHHHHHHcCCeEEEecCCHHH-cC--------CCCCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEe
Confidence 999999999999999999999888886532 11 257899999999999999986 4544222233999999
Q ss_pred ccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccC
Q 013675 310 LCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAG 387 (438)
Q Consensus 310 ~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~g 387 (438)
++|... . .+++.. ..+.+++..+++|. ++++| +|+++..++++.+...........
T Consensus 192 e~y~~~---------~-~~~l~~-~~~~~i~~~S~SK~-~g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~---------- 249 (391)
T 3bwn_A 192 FAYYWP---------H-YTPITR-RQDHDIMLFTFSKI-TGHAGSRIGWALVKDKEVAKKMVEYIIVNSI---------- 249 (391)
T ss_dssp CTTCST---------T-TSCCCC-CBCCSEEEEEHHHH-HSCGGGCEEEEEECCHHHHHHHHHHHHHHHS----------
T ss_pred CCCCCC---------C-CCcccc-CCCCeEEEEechhh-cCCCccceEEEEecCHHHHHHHHHHhccccc----------
Confidence 998621 0 112332 34568899999998 66666 599877555544322111110000
Q ss_pred CCCCchHHHHHHHHHHHc---------HHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 388 SRPGGLIAGAWAALMSLG---------QEGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 388 sr~~~~ia~~~aal~~~g---------~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+-+.....++..++..-. .+.+++..++..++++++.+.|+++|++++
T Consensus 250 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 306 (391)
T 3bwn_A 250 GVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTL 306 (391)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEEC
T ss_pred CCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 001111112223332210 235677888888999999999998877654
No 214
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.58 E-value=1.7e-13 Score=140.60 Aligned_cols=234 Identities=14% Similarity=0.088 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCC-CCCeEEecCCCcCcHHHHHhhc-C
Q 013675 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAYDKAAQYF-N 247 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~-~~~~Viv~~~~h~s~~~a~~~~-G 247 (438)
.+...++.++++++++.+.+. + ++++||++|+..|+++++.+... +|. .+++||+....|......+... |
T Consensus 96 ~~~~~~la~~l~~~~~~~~~~----v--~~~~sGseA~~~Aik~a~~~~~~-~g~~~~~~vi~~~~~yHg~~~~~~~~~~ 168 (476)
T 3i5t_A 96 TSPAARLAEKIATLTPGDLNR----I--FFTTGGSTAVDSALRFSEFYNNV-LGRPQKKRIIVRYDGYHGSTALTAACTG 168 (476)
T ss_dssp CHHHHHHHHHHHTTSSTTCCE----E--EEESSHHHHHHHHHHHHHHHHHH-TTCTTCCEEEEETTCCCCSSHHHHHTCC
T ss_pred CHHHHHHHHHHHhcCCCCcCE----E--EEeCchHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCcCcCChhhccccC
Confidence 345667888899998765554 6 89999999999999999875443 332 2468888777765544333322 1
Q ss_pred c------------EEEEeeCCCC--C-ccC--------HHHHHHhhc----cCcEEEEEecCCCCCccccC----HHHHH
Q 013675 248 I------------KLWRVPVDKE--F-RAD--------VKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQELG 296 (438)
Q Consensus 248 i------------~v~~v~~~~~--~-~~d--------~~~Le~~I~----~~t~~vv~~~~~~~tG~idd----i~~I~ 296 (438)
. .+..++.... . ..| +++|+++++ +++++|++..++++.|.+.+ +++|.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~ 248 (476)
T 3i5t_A 169 RTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFK 248 (476)
T ss_dssp CGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHH
T ss_pred ChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHH
Confidence 1 2344443211 1 122 789999986 46788999888888887655 99999
Q ss_pred HHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccC-CCC--ccEEEeCCCCCCCCC-CCcEEEEEecccccccchhcc
Q 013675 297 ELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS-VQG--VTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAV 372 (438)
Q Consensus 297 ~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~-~~g--vdsis~s~hK~~~~p-~g~g~l~~r~~~~~~~~~~~~ 372 (438)
++|++||+++++|+++.|+.. .|. .+... ..+ .|+++++ |.+.++ ..+|+++.++ ++.+......
T Consensus 249 ~lc~~~gillI~DEv~~g~gr-----~G~---~~~~~~~~~v~pdi~t~s--K~l~~G~~plg~v~~~~-~i~~~~~~~~ 317 (476)
T 3i5t_A 249 AICEKHDILYISDEVVTGFGR-----CGE---WFASEKVFGVVPDIITFA--KGVTSGYVPLGGLAISE-AVLARISGEN 317 (476)
T ss_dssp HHHHHTTCEEEEECTTTTTTT-----TSS---SCHHHHTTCCCCSEEEEC--GGGGTTSSCCEEEEECH-HHHHTTSGGG
T ss_pred HHHHHcCCEEEEEecccCCcc-----ccC---ceeeecccCCCcchhhhh--hhhcCCCcCeEEEEECH-HHHHHHhcCC
Confidence 999999999999999987643 111 11112 223 3788765 885555 5678877754 3332211000
Q ss_pred cccCCCccCCCCccCCC-CCc--hHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 373 TEWSGGLYVSPTVAGSR-PGG--LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 373 ~~~~g~~~~~~~~~gsr-~~~--~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
+.... ...+.. .+. ..++..++++.+.. ++..++..++.+++++.|+++
T Consensus 318 --~~~~~----~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~l~~~L~~l 369 (476)
T 3i5t_A 318 --AKGSW----FTNGYTYSNQPVACAAALANIELMER---EGIVDQAREMADYFAAALASL 369 (476)
T ss_dssp --CTTCE----ECCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHTT
T ss_pred --ccccc----ccccCCCCcCHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHH
Confidence 00000 011111 111 12333444443322 456677777888888888764
No 215
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.58 E-value=6e-14 Score=141.16 Aligned_cols=221 Identities=18% Similarity=0.120 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHhCCCC-CCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCc-CcHHHHHhhcCcE-
Q 013675 173 EAEVIAMTAALLGNKE-KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAH-SAYDKAAQYFNIK- 249 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~-~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h-~s~~~a~~~~Gi~- 249 (438)
..++++.++++++.+. ++ + ++|+||++|+.++++.++... .+ ++|++..+.| .....++...|.+
T Consensus 86 ~~~l~~~la~~~~~~~~~~----v--~~~~g~~~a~~~~~~~a~~~~--~~----~~vi~~~p~y~~~~~~~~~~~g~~~ 153 (426)
T 1sff_A 86 YLELCEIMNQKVPGDFAKK----T--LLVTTGSEAVENAVKIARAAT--KR----SGTIAFSGAYHGRTHYTLALTGKVN 153 (426)
T ss_dssp HHHHHHHHHHHSSCSSCEE----E--EEESSHHHHHHHHHHHHHHHH--TC----CEEEEETTCCCCSSHHHHHHSSCCT
T ss_pred HHHHHHHHHHhCCcccccE----E--EEeCchHHHHHHHHHHHHHhh--CC----CeEEEECCCcCCCchHhhhhcCCcc
Confidence 4456667888883232 33 5 999999999999999554321 22 3677776665 4455566666643
Q ss_pred ------------EEEeeCCC-----CCccCHHHHHHhhc-----cCcEEEEEec-CCCCCccccC----HHHHHHHHHHc
Q 013675 250 ------------LWRVPVDK-----EFRADVKAIKKYIN-----RNTVLIVGSA-PGFPHGIIDP----IQELGELALSH 302 (438)
Q Consensus 250 ------------v~~v~~~~-----~~~~d~~~Le~~I~-----~~t~~vv~~~-~~~~tG~idd----i~~I~~la~~~ 302 (438)
++.+|++. ++.+|+++|+++++ +++++|+++. ++| +|.+.+ +++|.++|++|
T Consensus 154 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~ 232 (426)
T 1sff_A 154 PYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEH 232 (426)
T ss_dssp TTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHc
Confidence 77788763 24579999999997 4677777754 455 997766 99999999999
Q ss_pred CCeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCC-CCcEEEEEecccccccchhcccccCCCccC
Q 013675 303 GTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTEWSGGLYV 381 (438)
Q Consensus 303 ~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p-~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~ 381 (438)
|+++++|++|+++... |. .-.++.....+|++++ +|++ ++ ..+|+++.+++ +.+.... .. .
T Consensus 233 ~~~li~De~~~~~~~~-----g~-~~~~~~~~~~~di~s~--sK~~-~~GlriG~~~~~~~-~~~~l~~------~~-~- 294 (426)
T 1sff_A 233 GIMLIADEVQSGAGRT-----GT-LFAMEQMGVAPDLTTF--AKSI-AGGFPLAGVTGRAE-VMDAVAP------GG-L- 294 (426)
T ss_dssp TCEEEEECTTTTTTTT-----SS-SSGGGGTTSCCSEEEE--CGGG-GTSSCCEEEEEEHH-HHTTSCT------TS-B-
T ss_pred CCEEEEechhhccCcc-----cc-hhhhhhcCCCCCEEEE--cccc-cCCCceEEEEEcHH-HHhhhcc------CC-c-
Confidence 9999999999875421 10 0011211123577654 5994 45 33699888753 3321100 00 0
Q ss_pred CCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhc
Q 013675 382 SPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVL 429 (438)
Q Consensus 382 ~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 429 (438)
..+. +-+....+++.++++.+..+ +..++..++++++.+.|++
T Consensus 295 ~~~~--~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~ 337 (426)
T 1sff_A 295 GGTY--AGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLA 337 (426)
T ss_dssp CCSS--SSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHH
T ss_pred CcCC--CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHH
Confidence 0000 11111233455555554332 4556777777888877765
No 216
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.57 E-value=9.3e-14 Score=141.73 Aligned_cols=175 Identities=15% Similarity=0.093 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCC-CCCeEEecCCCcCcHHHHHhhcC-
Q 013675 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSAHSAYDKAAQYFN- 247 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~-~~~~Viv~~~~h~s~~~a~~~~G- 247 (438)
.+...++.++++++++.+.+. + ++|+||++|+..|+++++.+... .|. .+++|++..++|......+...+
T Consensus 93 ~~~~~~la~~l~~~~~~~~~~----v--~~~~ggseA~~~al~~~~~~~~~-~g~~~~~~vi~~~~~yhg~~~~~~~~~~ 165 (459)
T 4a6r_A 93 HPAVVELSSLLAEVTPAGFDR----V--FYTNSGSESVDTMIRMVRRYWDV-QGKPEKKTLIGRWNGYHGSTIGGASLGG 165 (459)
T ss_dssp CHHHHHHHHHHHHHSCTTCCE----E--EEESSHHHHHHHHHHHHHHHHHH-TTCTTCCEEEEETTCCCCSSHHHHHHSC
T ss_pred CHHHHHHHHHHHHhCCCCCCE----E--EEeCchHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCcCCccHHHHhhcC
Confidence 345667888999998876655 6 99999999999999999875433 232 24788888877665443333321
Q ss_pred ------------cEEEEeeCCC-----CCccC--------HHHHHHhhc----cCcEEEEEecCCCCCccccC----HHH
Q 013675 248 ------------IKLWRVPVDK-----EFRAD--------VKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQE 294 (438)
Q Consensus 248 ------------i~v~~v~~~~-----~~~~d--------~~~Le~~I~----~~t~~vv~~~~~~~tG~idd----i~~ 294 (438)
..+..++... ++ +| +++|+++++ +++++|++...++++|.+.+ +++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~ 244 (459)
T 4a6r_A 166 MKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPE 244 (459)
T ss_dssp CTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHH
T ss_pred ChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHH
Confidence 1345555322 12 45 889999987 45677777777777788776 999
Q ss_pred HHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccC--CCCccEEEeCCCCCCCCC-CCcEEEEEecc
Q 013675 295 LGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS--VQGVTSISVDVHKYGLAP-KGTSVVLYRNR 362 (438)
Q Consensus 295 I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~--~~gvdsis~s~hK~~~~p-~g~g~l~~r~~ 362 (438)
|.++|++||+++++|++|.|+... |. .+... ....|+++++ |.+.++ ..+|+++.+++
T Consensus 245 l~~l~~~~~~llI~DEv~~g~gr~-----G~---~~~~~~~~~~pdi~t~s--K~l~gg~~~lg~v~~~~~ 305 (459)
T 4a6r_A 245 IERICRKYDVLLVADEVICGFGRT-----GE---WFGHQHFGFQPDLFTAA--KGLSSGYLPIGAVFVGKR 305 (459)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTTT-----SS---SSHHHHHTCCCSEEEEC--GGGGTTSSCCEEEEECHH
T ss_pred HHHHHHHcCCEEEEeccccCCCcc-----cc---cchHhhcCCCCCeeehh--hhhcCCCCCccceeeCHH
Confidence 999999999999999999876431 10 01111 1124777765 874443 56788777543
No 217
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.55 E-value=8.3e-14 Score=140.80 Aligned_cols=163 Identities=15% Similarity=0.171 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhc-Cc--
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF-NI-- 248 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~-Gi-- 248 (438)
...++.+.+++.++ +.+. + ++|+|||+|+..|+++++.. ..+ ++|++..++|..+...+... |.
T Consensus 96 ~~~~l~~~la~~~~-~~~~----v--~~~~sGsea~~~ai~~a~~~---~~~---~~vi~~~~~yhg~~~~~~~~~g~~~ 162 (434)
T 3l44_A 96 LEVKFAKMLKEAMP-ALDK----V--RFVNSGTEAVMTTIRVARAY---TGR---TKIMKFAGCYHGHSDLVLVAAGSGP 162 (434)
T ss_dssp HHHHHHHHHHHHCT-TCSE----E--EEESSHHHHHHHHHHHHHHH---HCC---CEEEEETTCCCCSSGGGGBC-----
T ss_pred HHHHHHHHHHHhCC-CCCE----E--EEeCchHHHHHHHHHHHHHh---hCC---CEEEEEcCccCCCcHHHHhhcCCcc
Confidence 34456667888886 3443 5 89999999999999998753 123 68888877765543322222 22
Q ss_pred -----------------EEEEeeCCCCCccCHHHHHHhhc---cCcEEEEEecCCCCCccccC----HHHHHHHHHHcCC
Q 013675 249 -----------------KLWRVPVDKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP----IQELGELALSHGT 304 (438)
Q Consensus 249 -----------------~v~~v~~~~~~~~d~~~Le~~I~---~~t~~vv~~~~~~~tG~idd----i~~I~~la~~~~i 304 (438)
++..+|.+ |+++|+++++ +++++|+++.+++++|.+.| +++|.++|++||+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~i 237 (434)
T 3l44_A 163 STLGTPDSAGVPQSIAQEVITVPFN-----NVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGA 237 (434)
T ss_dssp --CCCBSSTTCCHHHHTTEEEECTT-----CHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTC
T ss_pred cccCCCCcCCCCCcCCCceEecCcc-----cHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 22222221 8999999997 46778888877778888887 9999999999999
Q ss_pred eEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEec
Q 013675 305 CLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRN 361 (438)
Q Consensus 305 ~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~ 361 (438)
++|+|++|++| .. |. ...++......|+++++ |.+.++.++|+++.++
T Consensus 238 llI~DEv~~g~-~~-----g~-~~~~~~~~~~~di~t~s--K~~~~G~~iG~~~~~~ 285 (434)
T 3l44_A 238 LVIYDEVITAF-RF-----MY-GGAQDLLGVTPDLTALG--KVIGGGLPIGAYGGKK 285 (434)
T ss_dssp EEEEECTTTTT-TS-----SS-SCHHHHHTCCCSEEEEE--GGGGTTSSCEEEEECH
T ss_pred EEEEeccccce-ec-----cc-cHHHHHcCCCCCeeehh--hhhcCCcCeeeEEEcH
Confidence 99999999876 21 11 00011111224666655 7755667889886653
No 218
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.55 E-value=2.1e-13 Score=138.77 Aligned_cols=232 Identities=13% Similarity=0.046 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHHhC-CCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHh---cCC---CCCeEEecCCCcCcHHH-H
Q 013675 171 RFEAEVIAMTAALLG-NKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNK---RGI---TRPEMIIPVSAHSAYDK-A 242 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g-~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~---~G~---~~~~Viv~~~~h~s~~~-a 242 (438)
+...++.+.++++++ .+.++ + ++|+|||+|+..|+++++.+...+ .|. .+++|++..+.|..... +
T Consensus 101 ~~~~~la~~la~~~~~~~~~~----v--~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~ 174 (449)
T 2cjg_A 101 VAMARFVETFARVLGDPALPH----L--FFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYT 174 (449)
T ss_dssp HHHHHHHHHHHHHHCCTTCCE----E--EEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTG
T ss_pred HHHHHHHHHHHHhcCCCCCCE----E--EEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccch
Confidence 345567778888887 33343 6 999999999999999887543311 010 12789998876554322 1
Q ss_pred Hhh--------cCc-----EEEEeeCCC--CC--------ccCHHHHHHhhc---cCcEEEEEecCCCCCccccC----H
Q 013675 243 AQY--------FNI-----KLWRVPVDK--EF--------RADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP----I 292 (438)
Q Consensus 243 ~~~--------~Gi-----~v~~v~~~~--~~--------~~d~~~Le~~I~---~~t~~vv~~~~~~~tG~idd----i 292 (438)
... .+. +++.+|.+. .. ..|+++|+++|+ ++|++|+++..++++|.+.+ +
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l 254 (449)
T 2cjg_A 175 LSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFF 254 (449)
T ss_dssp GGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHH
T ss_pred hhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHH
Confidence 111 122 567777653 11 357778999995 57888888877789997666 9
Q ss_pred HHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcc
Q 013675 293 QELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAV 372 (438)
Q Consensus 293 ~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~ 372 (438)
++|.++|++||+++++|++|+|+... |... .++......|+++++ |++ | +|+++.++ ++......
T Consensus 255 ~~l~~l~~~~g~lli~DEv~~g~g~~-----g~~~-~~~~~~~~~di~t~s--K~l--~--iG~~~~~~-~~~~~l~~-- 319 (449)
T 2cjg_A 255 AAMRELCDEFDALLIFDEVQTGCGLT-----GTAW-AYQQLDVAPDIVAFG--KKT--Q--VCGVMAGR-RVDEVADN-- 319 (449)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTT-----SSSS-THHHHTCCCSEEEEC--GGG--S--SEEEEECG-GGGGSTTC--
T ss_pred HHHHHHHHHCCcEEEEeccccCCCcc-----Ccce-eecccCCCceEEEec--Ccc--c--EEEEEECH-HHhhhhhh--
Confidence 99999999999999999999876431 1100 011111235777765 985 4 67877764 44332100
Q ss_pred cccCCCccCCCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhc
Q 013675 373 TEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVL 429 (438)
Q Consensus 373 ~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 429 (438)
.+.+......+..+ +....+++.++++.+.. ++..++..++.+++.+.|++
T Consensus 320 -~~~~~~~~~~t~~~--n~~~~~aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~ 370 (449)
T 2cjg_A 320 -VFAVPSRLNSTWGG--NLTDMVRARRILEVIEA---EGLFERAVQHGKYLRARLDE 370 (449)
T ss_dssp -TTTSTTSSCCSSSS--CHHHHHHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHH
T ss_pred -cccCCcccccCCCC--CHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH
Confidence 00000000011111 11123344455544423 34567777888888888875
No 219
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.54 E-value=5.3e-14 Score=141.96 Aligned_cols=167 Identities=19% Similarity=0.168 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcH-HHHHhhcCc-
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAY-DKAAQYFNI- 248 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~-~~a~~~~Gi- 248 (438)
+...++.++++++++ +.+. + ++|+|||+|+..+++.++.. .| +++|++..++|... ..+....|.
T Consensus 92 ~~~~~la~~l~~~~~-~~~~----v--~~~~ggsea~~~al~~a~~~----~~--~~~vi~~~~~yhg~~~~~~~~~~~~ 158 (427)
T 3fq8_A 92 ALENVLAEMVNDAVP-SIEM----V--RFVNSGTEACMAVLRIMRAY----TG--RDKIIKFEGCYHGHADMFLVKAGSG 158 (427)
T ss_dssp HHHHHHHHHHHHHST-TCSE----E--EEESSHHHHHHHHHHHHHHH----HC--CCEEEEEETCCCCSCGGGCSSCCTH
T ss_pred HHHHHHHHHHHHhCC-CCCE----E--EEeCCHHHHHHHHHHHHHHh----hC--CCEEEEECCCcCCCCHHHHHhcCCc
Confidence 456677888999987 4443 5 99999999999999887743 12 25777766665442 222211111
Q ss_pred ------------------EEEEeeCCCCCccCHHHHHHhhcc---CcEEEEEecCCCCCccccC----HHHHHHHHHHcC
Q 013675 249 ------------------KLWRVPVDKEFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDP----IQELGELALSHG 303 (438)
Q Consensus 249 ------------------~v~~v~~~~~~~~d~~~Le~~I~~---~t~~vv~~~~~~~tG~idd----i~~I~~la~~~~ 303 (438)
.+..+|.+ |+++|++++++ ++++|+++.+++++|.+.| +++|.++|++||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~ 233 (427)
T 3fq8_A 159 VATLGLPSSPGVPKKTTANTLTTPYN-----DLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHD 233 (427)
T ss_dssp HHHHTCCSCSSSCHHHHTTEEEEETT-----CHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTT
T ss_pred ccccCCCCCCCCCCcccCceeecCCC-----CHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 13333332 89999999976 6889999988889999988 999999999999
Q ss_pred CeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEeccccc
Q 013675 304 TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIR 365 (438)
Q Consensus 304 i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~ 365 (438)
+++++|++|+++ .. |. ....+......|+++++ |.+.++..+|+++.+ +++.
T Consensus 234 ~~li~DEv~~g~-~~-----g~-~~~~~~~~~~~di~t~s--K~~~~G~~~G~~~~~-~~~~ 285 (427)
T 3fq8_A 234 ALLVFDEVITGF-RI-----AY-GGVQEKFGVTPDLTTLG--KIIGGGLPVGAYGGK-REIM 285 (427)
T ss_dssp CEEEEECTTTBT-TT-----BT-THHHHHTTCCCSEEEEC--GGGGTTSSCEEEEEC-HHHH
T ss_pred CEEEEecccccc-cc-----Cc-chhhHhcCCCCChhhhh--hhhhCCcceEEEEEc-HHHH
Confidence 999999999876 21 00 00011111124677666 885554558887665 4443
No 220
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.54 E-value=1.9e-13 Score=139.32 Aligned_cols=173 Identities=19% Similarity=0.169 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhc-C
Q 013675 170 ARFEAEVIAMTAALLGNKE-KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF-N 247 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~~-~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~-G 247 (438)
.+...++.++++++++.+. +. + ++|+|||+|+..|++.++.. .| +++|++...+|......+... +
T Consensus 106 ~~~~~~la~~l~~~~~~~~~~~----v--~~~~sGseA~~~alk~a~~~----~g--~~~ii~~~~~yhg~~~~~~~~~~ 173 (453)
T 4ffc_A 106 YEQYVQVAELLNALTPGDHDKR----T--ALFNSGAEAVENAIKVARLA----TG--RPAVVAFDNAYHGRTNLTMALTA 173 (453)
T ss_dssp CHHHHHHHHHHHHHSSCSSCEE----E--EEESSHHHHHHHHHHHHHHH----HC--CCEEEEETTCCCCSSHHHHHHCC
T ss_pred CHHHHHHHHHHHHhCCCCCCcE----E--EEeCcHHHHHHHHHHHHHHh----cC--CCEEEEEcCccCCcchHHHhhcC
Confidence 3455677888999987542 33 5 89999999999999988753 22 267888777755443333222 1
Q ss_pred -------------cEEEEeeCCC----CCcc--------CHHHHHHhhccCcEEEEEecCCCCC-ccccC----HHHHHH
Q 013675 248 -------------IKLWRVPVDK----EFRA--------DVKAIKKYINRNTVLIVGSAPGFPH-GIIDP----IQELGE 297 (438)
Q Consensus 248 -------------i~v~~v~~~~----~~~~--------d~~~Le~~I~~~t~~vv~~~~~~~t-G~idd----i~~I~~ 297 (438)
..+..+|.+. ...+ ++++|++++++++.+++++.|++++ |.+.+ +++|.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~ 253 (453)
T 4ffc_A 174 KSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTA 253 (453)
T ss_dssp CCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHH
T ss_pred CCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHH
Confidence 1466666641 1112 2577777776555444445555554 55655 999999
Q ss_pred HHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecc
Q 013675 298 LALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNR 362 (438)
Q Consensus 298 la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~ 362 (438)
+|++||+++++|++|.++... |. .-.++......|+++++ |.+.++..+|+++.+++
T Consensus 254 l~~~~~~llI~DEv~~g~g~~-----g~-~~a~~~~~~~pdi~t~s--K~~~~G~~~G~~~~~~~ 310 (453)
T 4ffc_A 254 WASENGVVFIADEVQTGFART-----GA-WFASEHEGIVPDIVTMA--KGIAGGMPLSAVTGRAE 310 (453)
T ss_dssp HHHHHTCEEEEECTTTTTTTT-----SS-SSTHHHHTCCCSEEEEC--GGGGTTSSCEEEEEEHH
T ss_pred HHHHcCCEEEEecCccCCCcc-----cc-cchhhhcCCCcchHhhh--hhhcCCcCeEEEEECHH
Confidence 999999999999999876431 11 00011111124777765 88555567898877643
No 221
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.54 E-value=2e-14 Score=149.93 Aligned_cols=156 Identities=13% Similarity=0.122 Sum_probs=119.1
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhc--CcEEEEeeCCC--CCccCHHHHHHhhccC
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF--NIKLWRVPVDK--EFRADVKAIKKYINRN 273 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~--Gi~v~~v~~~~--~~~~d~~~Le~~I~~~ 273 (438)
++|+|+++++.+++.++..+....+| ++|+++.++|+.+..++... |++++.+|+++ ++.+|+++|+++++++
T Consensus 169 ~~t~G~~eal~~~~~~l~~~~l~~~G---d~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~ 245 (546)
T 2zy4_A 169 FAVEGGTAAMAYIFESLKLNGLLKAG---DKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPA 245 (546)
T ss_dssp EEEEHHHHHHHHHHHHHHHTTSSCTT---CEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTT
T ss_pred EEECCHHHHHHHHHHHhhhhhcCCCC---CEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCC
Confidence 89999999999999875211011256 89999999999999886654 68999999875 4679999999999888
Q ss_pred cEEEEEecCCCCCccccC---HHHHHHHH--HHcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCC
Q 013675 274 TVLIVGSAPGFPHGIIDP---IQELGELA--LSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYG 348 (438)
Q Consensus 274 t~~vv~~~~~~~tG~idd---i~~I~~la--~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~ 348 (438)
+++|++++|+||||.+.+ +++|.++| +++|+++++|++|+.+... . . ++.....+.+++..|++|.+
T Consensus 246 ~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~------~-~-s~~~~~~~~~i~~~S~SK~~ 317 (546)
T 2zy4_A 246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD------F-Q-SLFAICPENTLLVYSFSKYF 317 (546)
T ss_dssp EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT------C-C-CHHHHCGGGEEEEEESTTTT
T ss_pred CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc------C-c-CHHHhCCCCEEEEEeCcccc
Confidence 999999999999999977 56678888 7899999999999876531 0 1 11111124578889999984
Q ss_pred C-CCCCcEEEEEecccc
Q 013675 349 L-APKGTSVVLYRNREI 364 (438)
Q Consensus 349 ~-~p~g~g~l~~r~~~~ 364 (438)
. .+..+|+++..++++
T Consensus 318 g~~GlRiG~~~~~~~~l 334 (546)
T 2zy4_A 318 GATGWRLGVVAAHQQNV 334 (546)
T ss_dssp TCGGGCEEEEEEESSCH
T ss_pred CCCCcceEEEEECCHHH
Confidence 2 233489988876533
No 222
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.53 E-value=6.5e-13 Score=135.21 Aligned_cols=171 Identities=19% Similarity=0.137 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhc--
Q 013675 170 ARFEAEVIAMTAALLGNKE-KASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF-- 246 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~~-~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~-- 246 (438)
.+...++.++++++++.+. +. + ++|+|||+|+..|+++++.+ .| +++|++...+|......+...
T Consensus 103 ~~~~~~la~~l~~~~~~~~~~~----v--~~~~sGseA~~~Alk~a~~~----~g--~~~ii~~~~~yhG~~~~~~~~~~ 170 (451)
T 3oks_A 103 YEGYVAVCEQLNRLTPVRGDKR----S--ALFNSGSEAVENAVKIARSH----TH--KPAVVAFDHAYHGRTNLTMALTA 170 (451)
T ss_dssp CHHHHHHHHHHHHHSSCCSSEE----E--EEESSHHHHHHHHHHHHHHH----HC--CCEEEEETTCCCCSSHHHHHHCC
T ss_pred CHHHHHHHHHHHHhCCcCCCCE----E--EEeCcHHHHHHHHHHHHHHh----cC--CCeEEEEcCCcCCccHHHHHhcC
Confidence 3455678888999987542 33 5 89999999999999998853 22 267887777755433332222
Q ss_pred ------------CcEEEEeeCCCCC-------------ccCHHHHHHhhc----c-CcEEEEEecCCCCCccccC----H
Q 013675 247 ------------NIKLWRVPVDKEF-------------RADVKAIKKYIN----R-NTVLIVGSAPGFPHGIIDP----I 292 (438)
Q Consensus 247 ------------Gi~v~~v~~~~~~-------------~~d~~~Le~~I~----~-~t~~vv~~~~~~~tG~idd----i 292 (438)
...++.+|....+ ..+++.+++.+. + ++++|++...+++.|.+.+ +
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l 250 (451)
T 3oks_A 171 KVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFL 250 (451)
T ss_dssp CCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHH
T ss_pred CCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHH
Confidence 1156677765211 123444444443 3 4556665555555566655 9
Q ss_pred HHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCCC--CccEEEeCCCCCCCCCCCcEEEEEecc
Q 013675 293 QELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQ--GVTSISVDVHKYGLAPKGTSVVLYRNR 362 (438)
Q Consensus 293 ~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~--gvdsis~s~hK~~~~p~g~g~l~~r~~ 362 (438)
++|.++|++||+++++|++|.++... |. .+..... ..|+++++ |.+.++..+|+++.+++
T Consensus 251 ~~l~~l~~~~g~~lI~DEv~~g~g~~-----g~---~~~~~~~~~~pdi~t~s--K~l~~G~~iG~v~~~~~ 312 (451)
T 3oks_A 251 PTLLDWCRKNDVVFIADEVQTGFART-----GA---MFACEHEGIDPDLIVTA--KGIAGGLPLSAVTGRAE 312 (451)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTT-----SS---SSGGGGGTCCCSEEEEC--GGGGTTSSCEEEEEEHH
T ss_pred HHHHHHHHHcCCEEEEEecccCCCcc-----cc---chhhhhcCCCCCeeeeh--hhhhCCcceEEEEECHH
Confidence 99999999999999999999876431 11 1111222 24777665 88655567888877643
No 223
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.52 E-value=1.4e-13 Score=140.02 Aligned_cols=221 Identities=14% Similarity=0.127 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHH-h---
Q 013675 169 VARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA-Q--- 244 (438)
Q Consensus 169 ~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~-~--- 244 (438)
..+++.++.++++++++ +.+. + ++|+||++|+..++++++... .+ ++||+.++.|..+...+ .
T Consensus 95 ~~~~~~~la~~l~~~~~-~~~~----v--~~~~gg~eA~~~al~~ar~~~---~~---~~vi~~~~~yhg~~~~~~~~~~ 161 (453)
T 2cy8_A 95 SHPLEVRWAERIVAAFP-SIRK----L--RFTGSGTETTLLALRVARAFT---GR---RMILRFEGHYHGWHDFSASGYN 161 (453)
T ss_dssp SCHHHHHHHHHHHHHCT-TCSE----E--EEESCHHHHHHHHHHHHHHHH---CC---CEEEEECC--------------
T ss_pred CCHHHHHHHHHHHhhCC-CCCE----E--EEeCCHHHHHHHHHHHHHHhh---CC---CEEEEEcCCcCCCchhhHhhcC
Confidence 45678889999999886 4443 5 899999999999999976421 22 57888777665433211 1
Q ss_pred -------hcCcE------EEEeeCCCCCccCHHHHHHhhc---cCcEEEEEecCCCCCccccC----HHHHHHHHHHcCC
Q 013675 245 -------YFNIK------LWRVPVDKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP----IQELGELALSHGT 304 (438)
Q Consensus 245 -------~~Gi~------v~~v~~~~~~~~d~~~Le~~I~---~~t~~vv~~~~~~~tG~idd----i~~I~~la~~~~i 304 (438)
..|+. +..+|. .|+++|+++++ +++++|+++..++++|.+.| +++|.++|++||+
T Consensus 162 ~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~ 236 (453)
T 2cy8_A 162 SHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGA 236 (453)
T ss_dssp --------------CGGGEEEECT-----TCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTC
T ss_pred CccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 12332 334443 38999999997 46778777776677998877 9999999999999
Q ss_pred eEEEeccccchhhhhhhhcCCCCCCCcc--CCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCC
Q 013675 305 CLHVDLCLGGFVLPFAKKLGYPIPPFDF--SVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVS 382 (438)
Q Consensus 305 ~lhVD~a~gg~~~pf~~~~g~~~p~~~~--~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~ 382 (438)
++++|++++++ .. |. .+.. .....|++++ .|.+.++..+|+++.++ ++.+..... -.+..+
T Consensus 237 ~lI~DEv~~g~-~~-----g~---~~~~~~~~~~~di~s~--sK~l~~G~~~G~v~~~~-~~~~~l~~~---~~~~~~-- 299 (453)
T 2cy8_A 237 LFILDEVISGF-RV-----GN---HGMQALLDVQPDLTCL--AKASAGGLPGGILGGRE-DVMGVLSRG---SDRKVL-- 299 (453)
T ss_dssp EEEEECTTTTT-TT-----CT---THHHHHHTCCCSEEEE--EGGGGTTSSCEEEEECH-HHHTTSSSC---C-------
T ss_pred EEEEecCcccc-cc-----Cc---hhhhHHhCCCCcEEEE--ChhhhCCcceEEEechH-HHHHHhccc---cCCCce--
Confidence 99999999876 21 10 0111 1112466654 49865556789988774 333211000 000000
Q ss_pred CCccCCCCCc--hHHHHHHHHHH-HcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 383 PTVAGSRPGG--LIAGAWAALMS-LGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 383 ~~~~gsr~~~--~ia~~~aal~~-~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
..++-.+. ..++..++++. + .++..++..++.+++.+.|+++
T Consensus 300 --~~~t~~~n~~~~aa~~aal~~~~----~~~~~~~~~~~~~~l~~~L~~~ 344 (453)
T 2cy8_A 300 --HQGTFTGNPITAAAAIAAIDTIL----EDDVCAKINDLGQFAREAMNHL 344 (453)
T ss_dssp ------CCCCHHHHHHHHHHHHHHH----HTTHHHHHHHHHHHHHHHHHHH
T ss_pred --eCCCCCCCHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHHHHH
Confidence 00111111 12333445544 3 2455677777888888877653
No 224
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.51 E-value=3.8e-13 Score=136.00 Aligned_cols=218 Identities=16% Similarity=0.141 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH-HHh-----
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK-AAQ----- 244 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~-a~~----- 244 (438)
+...++.++++++++ +.+. + ++|+|||+|+.++++++|... .+ ++|++..++|..... +..
T Consensus 96 ~~~~~l~~~la~~~~-~~~~----v--~~~~sgseA~~~al~~ar~~~---~~---~~vi~~~~~yhg~~~~~~~~~~~~ 162 (434)
T 2epj_A 96 EAEVLLAEKILGYVK-RGGM----I--RFVNSGTEATMTAIRLARGYT---GR---DLILKFDGCYHGSHDAVLVAAGSA 162 (434)
T ss_dssp HHHHHHHHHHHHHHC-TTCE----E--EEESSHHHHHHHHHHHHHHHH---CC---CEEEEEETCCCCSSGGGSEECC--
T ss_pred HHHHHHHHHHHHhCC-CCCE----E--EEeCCHHHHHHHHHHHHHHhh---CC---CeEEEEcCCcCCCCHHHHHhcCCC
Confidence 455667778888885 3333 5 899999999999999876421 22 578777766544322 111
Q ss_pred --------hcCc------EEEEeeCCCCCccCHHHHHHhhcc---CcEEEEEecCCCCCccccC----HHHHHHHHHHcC
Q 013675 245 --------YFNI------KLWRVPVDKEFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDP----IQELGELALSHG 303 (438)
Q Consensus 245 --------~~Gi------~v~~v~~~~~~~~d~~~Le~~I~~---~t~~vv~~~~~~~tG~idd----i~~I~~la~~~~ 303 (438)
..|+ ++..+|. .|+++|++++++ ++++|+++..++++|.+.| +++|.++|++||
T Consensus 163 ~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g 237 (434)
T 2epj_A 163 AAHYGVPTSAGVPEAVARLTLVTPY-----NDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESG 237 (434)
T ss_dssp ----CEESSTTCCHHHHTTEEEEET-----TCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHT
T ss_pred ccccCCCCCCCCCCcccCceEecCC-----CCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcC
Confidence 1243 3555554 289999999974 6778877777778999887 999999999999
Q ss_pred CeEEEeccccchhh--hhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccC
Q 013675 304 TCLHVDLCLGGFVL--PFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYV 381 (438)
Q Consensus 304 i~lhVD~a~gg~~~--pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~ 381 (438)
+++++|++++|+.. ++. ++......|++++ +|.+.++..+|+++.++ ++.+.... .+..+
T Consensus 238 ~~lI~DEv~~g~~~g~~~~---------~~~~~~~~di~s~--sK~l~~G~~~G~v~~~~-~~~~~l~~-----~~~~~- 299 (434)
T 2epj_A 238 ALLILDEVVTGFRLGLEGA---------QGYFNIEGDIIVL--GKIIGGGFPVGAVAGSR-EVMSLLTP-----QGKVF- 299 (434)
T ss_dssp CEEEEEETTTTTTSSTTHH---------HHHHTCCCSEEEE--EGGGGTTSSCEEEEECH-HHHTTBTT-----TSSBC-
T ss_pred CEEEEEcchhceeCCcchh---------hHHhCCCCCeeee--cchhcCCcceeeeeecH-HHHHhhcc-----CCCcc-
Confidence 99999999987621 010 0111112466655 49855545688888764 33321110 00000
Q ss_pred CCCccCCCCCc--hHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 382 SPTVAGSRPGG--LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 382 ~~~~~gsr~~~--~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
..++-.+. ..++..++++.+.. ++..++..++++++.+.|+++
T Consensus 300 ---~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~ 344 (434)
T 2epj_A 300 ---NAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEEAASEV 344 (434)
T ss_dssp ---CCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHH
T ss_pred ---cCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHH
Confidence 01111111 23344445544422 356677777888888887654
No 225
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.51 E-value=4.6e-13 Score=135.18 Aligned_cols=227 Identities=15% Similarity=0.074 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc-HHHHHhhc---
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAAQYF--- 246 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s-~~~a~~~~--- 246 (438)
+...++.+.++++++.+.++ + ++|+||++|+..++++++.. +| +++|++..+.|.. ...+....
T Consensus 85 ~~~~~l~~~la~~~~~~~~~----v--~~~~gg~ea~~~a~~~~~~~----~~--~~~vi~~~~~yhg~~~~~~~~~~~~ 152 (433)
T 1zod_A 85 RPVVDLATRLANITPPGLDR----A--LLLSTGAESNEAAIRMAKLV----TG--KYEIVGFAQSWHGMTGAAASATYSA 152 (433)
T ss_dssp HHHHHHHHHHHHHSCTTCCE----E--EEESCHHHHHHHHHHHHHHH----HT--CCEEEEETTCCCCSSHHHHHTCCSS
T ss_pred HHHHHHHHHHHHhCCCCcCE----E--EEeCchHHHHHHHHHHHHHh----hC--CCeEEEECCCcCCCChhHHhhcCCc
Confidence 34556777889999876554 6 89999999999999987642 22 2678888776544 33333221
Q ss_pred --------CcEEEEeeCCC----CC--------ccCHHHHHHhhc----cCcEEEEEecCCCCCccccC----HHHHHHH
Q 013675 247 --------NIKLWRVPVDK----EF--------RADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQELGEL 298 (438)
Q Consensus 247 --------Gi~v~~v~~~~----~~--------~~d~~~Le~~I~----~~t~~vv~~~~~~~tG~idd----i~~I~~l 298 (438)
...++.++++. .+ .+|+++|+++++ +++++|+++..++++|.+.+ +++|+++
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l 232 (433)
T 1zod_A 153 GRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRK 232 (433)
T ss_dssp CCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHH
T ss_pred cccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHH
Confidence 11344555432 11 257999999997 46677776655678997655 9999999
Q ss_pred HHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCC
Q 013675 299 ALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGG 378 (438)
Q Consensus 299 a~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~ 378 (438)
|++||+++++|++|+++... |. .-.++......|+++++ |.+.++.++|+++.++ ++.+.... .....+
T Consensus 233 ~~~~~~~li~DEv~~~~g~~-----g~-~~~~~~~~~~~di~s~s--K~~~~G~~ig~~~~~~-~~~~~~~~-~~~~~~- 301 (433)
T 1zod_A 233 CEARGMLLILDEAQTGVGRT-----GT-MFACQRDGVTPDILTLS--KTLGAGLPLAAIVTSA-AIEERAHE-LGYLFY- 301 (433)
T ss_dssp HHHHTCEEEEECTTTTTTTT-----SS-SSTHHHHTCCCSEEEEC--HHHHTTSSCEEEEECH-HHHHHHHH-TTCCCC-
T ss_pred HHHhCCEEEEeccccCCCcC-----ch-HhHHhhcCCCCCEEEec--ccccCCCCeeEEEEhH-HHHHhhcc-CCCCCC-
Confidence 99999999999999876421 10 00011111234776554 8755556789988765 33322111 000000
Q ss_pred ccCCCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhc
Q 013675 379 LYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVL 429 (438)
Q Consensus 379 ~~~~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 429 (438)
.+..+ +....+++.++++.+..+ +..++..++.+++.+.|++
T Consensus 302 ----~t~~~--~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~ 343 (433)
T 1zod_A 302 ----TTHVS--DPLPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLD 343 (433)
T ss_dssp ----CTTTT--CHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHH
T ss_pred ----CCCCc--CHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHH
Confidence 01100 111123344555444332 3456666777777777765
No 226
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.49 E-value=2.5e-13 Score=137.15 Aligned_cols=218 Identities=16% Similarity=0.173 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcC-cHHHHHhhcCcE-
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS-AYDKAAQYFNIK- 249 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~-s~~~a~~~~Gi~- 249 (438)
...++.+.++++++ +.+. + ++|+|||+|+..|+++++... .+ ++|++..+.|. ....+....|..
T Consensus 94 ~~~~l~~~la~~~~-~~~~----v--~~~~~Gsea~~~ai~~a~~~~---~~---~~vi~~~~~yhg~~~~~~~~~g~~~ 160 (429)
T 3k28_A 94 IENKLAKLVIERVP-SIEI----V--RMVNSGTEATMSALRLARGYT---GR---NKILKFIGCYHGHGDSLLIKAGSGV 160 (429)
T ss_dssp HHHHHHHHHHHHST-TCSE----E--EEESSHHHHHHHHHHHHHHHH---TC---CEEEEEETCCCCSCGGGCSSCCTTC
T ss_pred HHHHHHHHHHHhCC-CCCE----E--EEeCChHHHHHHHHHHHHHhh---CC---CEEEEECCCcCCCcHHHHHhcCCcc
Confidence 34456667888876 3333 5 899999999999999987531 22 57777665543 333333222322
Q ss_pred ------------------EEEeeCCCCCccCHHHHHHhhc---cCcEEEEEecCCCCCccccC----HHHHHHHHHHcCC
Q 013675 250 ------------------LWRVPVDKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP----IQELGELALSHGT 304 (438)
Q Consensus 250 ------------------v~~v~~~~~~~~d~~~Le~~I~---~~t~~vv~~~~~~~tG~idd----i~~I~~la~~~~i 304 (438)
++.+|.+ |+++|+++++ +++++|++...++++|.+.| +++|.++|++||+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~ 235 (429)
T 3k28_A 161 ATLGLPDSPGVPEGVAKNTITVAYN-----DLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGA 235 (429)
T ss_dssp -----CCCTTCCHHHHTTEEEEETT-----CHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTC
T ss_pred cccCCCCcCCCCCcccCceeecCCC-----CHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 2222221 8999999997 46778888887778888888 9999999999999
Q ss_pred eEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCC
Q 013675 305 CLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPT 384 (438)
Q Consensus 305 ~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~ 384 (438)
++|+|++|.++ .. |. ....+......|.++++ |.+.++.++|+++.++ ++.+........+.+
T Consensus 236 ~li~DEv~~g~-~~-----g~-~~~~~~~~~~~di~t~s--K~~~~G~~iG~~~~~~-~~~~~~~~~~~~~~~------- 298 (429)
T 3k28_A 236 LLIFDEVMTGF-RV-----AY-NCGQGYYGVTPDLTCLG--KVIGGGLPVGAYGGKA-EIMRQVAPSGPIYQA------- 298 (429)
T ss_dssp EEEEECTTTTT-TS-----ST-THHHHHHTCCCSEEEEC--GGGGTTSCCEEEEECH-HHHTTBTTTSSBCCC-------
T ss_pred EEEEecccccc-cc-----Cc-chHHHHhCCCCceehhh--hhhcCCCCeEEEEEcH-HHHhhhccCCCcccc-------
Confidence 99999999876 21 10 00001111124666654 8765567789887764 333221100000011
Q ss_pred ccCCCCCc--hHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 385 VAGSRPGG--LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 385 ~~gsr~~~--~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
++-.+. ..++..++++.+. ++..++..++.+++++.|+++
T Consensus 299 --~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~ 340 (429)
T 3k28_A 299 --GTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKA 340 (429)
T ss_dssp --CTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 111111 1223334443322 566677777777777777653
No 227
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.49 E-value=5.8e-13 Score=134.45 Aligned_cols=162 Identities=16% Similarity=0.154 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHH-HHhhcCc-
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDK-AAQYFNI- 248 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~-a~~~~Gi- 248 (438)
+...++.++++++++ +.+. + ++|+|||+|+..|++.++.. .| +++|++....|..... +....|.
T Consensus 93 ~~~~~la~~l~~~~~-~~~~----v--~~~~sGsea~~~al~~a~~~----~~--~~~ii~~~~~yhg~~~~~~~~~~~~ 159 (429)
T 4e77_A 93 EMEVKMAQLVTDLVP-TMDM----V--RMVNSGTEATMSAIRLARGY----TG--RDKIIKFEGCYHGHADCLLVKAGSG 159 (429)
T ss_dssp HHHHHHHHHHHHHST-TCSE----E--EEESSHHHHHHHHHHHHHHH----HC--CCEEEEETTCCCC------------
T ss_pred HHHHHHHHHHHhhCC-CCCE----E--EEeCcHHHHHHHHHHHHHHh----hC--CCEEEEEcCccCCCChhhhhhcCCc
Confidence 445567778888887 3343 5 99999999999999987743 12 2577776666544332 2211111
Q ss_pred ------------------EEEEeeCCCCCccCHHHHHHhhcc---CcEEEEEecCCCCCccccC----HHHHHHHHHHcC
Q 013675 249 ------------------KLWRVPVDKEFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDP----IQELGELALSHG 303 (438)
Q Consensus 249 ------------------~v~~v~~~~~~~~d~~~Le~~I~~---~t~~vv~~~~~~~tG~idd----i~~I~~la~~~~ 303 (438)
.+..+|. -|+++|++++++ ++++|++...++++|.+.| +++|.++|++||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~ 234 (429)
T 4e77_A 160 ALTLGQPNSPGVPTDFAKHTLTCTY-----NDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFG 234 (429)
T ss_dssp ------CCCTTSCGGGGTTEEEECT-----TCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHT
T ss_pred ccccCCCCcCCCCCccCCceeecCC-----CCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 1222222 189999999974 5677776666666778877 999999999999
Q ss_pred CeEEEeccccchhhhhhhhcCCCCCCCccCCCC--ccEEEeCCCCCCCCCCCcEEEEEec
Q 013675 304 TCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRN 361 (438)
Q Consensus 304 i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~g--vdsis~s~hK~~~~p~g~g~l~~r~ 361 (438)
+++|+|++|+++ .. |. .+.....+ .|+++++ |.+.++.+.|+++.++
T Consensus 235 ~lli~DEv~~g~-r~-----g~---~~~~~~~~~~pdi~t~s--K~~~~G~~~G~~~~~~ 283 (429)
T 4e77_A 235 ALLIIDEVMTGF-RV-----AL---AGAQDYYHVIPDLTCLG--KIIGGGMPVGAFGGRR 283 (429)
T ss_dssp CEEEEEETTTBT-TT-----BT---TCHHHHTTCCCSEEEEE--GGGGTTSCCEEEEECH
T ss_pred CEEEEeccccCc-cc-----Cc---chHHHhcCCCCCeeeec--ccccCCCCeEEEEECH
Confidence 999999999876 31 10 11111122 3676655 8865566788876653
No 228
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.49 E-value=7.7e-14 Score=141.13 Aligned_cols=215 Identities=14% Similarity=0.137 Sum_probs=147.1
Q ss_pred HHHHHHHHHHHHHHHhC--CCCCCCCCccceeEcCChHHHHHHHHHHH--------HHHHHHhcCCCCCeEEecCCCcCc
Q 013675 169 VARFEAEVIAMTAALLG--NKEKASGGQVCGNMTSGGTESILLAVKSS--------RDYMRNKRGITRPEMIIPVSAHSA 238 (438)
Q Consensus 169 ~~~~e~~~~~~~a~l~g--~~~~~~~~~v~g~~t~ggt~a~~~al~a~--------~~~~~~~~G~~~~~Viv~~~~h~s 238 (438)
..++++.+.+++.+..+ .++++ + ++|+|+++++.+++.++ . .+| ++|+++.+.|+.
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~~----i--v~t~G~~~al~~~~~~l~~~~~~~~~-----~~G---d~Vlv~~P~y~~ 167 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDRY----I--VFGVGVTQLIHGLVISLSPNMTATPD-----APE---SKVVAHAPFYPV 167 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTCE----E--EEESHHHHHHHHHHHHHSCCTTTCTT-----SCC---EEEEECSSCCHH
T ss_pred hHHHHHHHHHHHHHhCCcCCCCCE----E--EEeCCHHHHHHHHHHHHhhccccccC-----CCC---CEEEEeCCCccc
Confidence 56777777777765444 34444 6 99999999999999987 4 267 899999999999
Q ss_pred HHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhh
Q 013675 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLP 318 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~p 318 (438)
+...++..|++++. +.+|+++|++++++++++|++++|+||||.+.+ + +++ ++..+.|.++-. +
T Consensus 168 ~~~~~~~~g~~~~~------~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~---~ 231 (427)
T 2hox_A 168 FREQTKYFDKKGYV------WAGNAANYVNVSNPEQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYW---P 231 (427)
T ss_dssp HHHHHHHSCBTTEE------EEEEGGGGTTCSCGGGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCS---T
T ss_pred HHHHHHHcCCeeee------ecCCHHHHHHhhcCCceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccC---C
Confidence 99999999988763 457899999999888999999999999999988 4 233 567788877521 1
Q ss_pred hhhhcCCCCCCCccCCCCccEEEeCCCCCCCCCCC--cEEEEEecccccccchhcccccCCCccCCCCccCCCCCchHHH
Q 013675 319 FAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKG--TSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAG 396 (438)
Q Consensus 319 f~~~~g~~~p~~~~~~~gvdsis~s~hK~~~~p~g--~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~ia~ 396 (438)
+ .+..... .+.+++..+++|. ++++| +|+++.+++++.+........+.. +....+
T Consensus 232 ~-------~s~~~~~-~~~~i~~~S~SK~-~g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~-------------~~~~~~ 289 (427)
T 2hox_A 232 H-------YTPIKYK-ADEDILLFTMSKF-TGHSGSRFGWALIKDESVYNNLLNYMTKNTE-------------GTPRET 289 (427)
T ss_dssp T-------TSCCCSC-BCCSEEEEEHHHH-TSCGGGCCEEEEECCHHHHHHHHHHHHHHTS-------------SCCHHH
T ss_pred C-------CCccccC-CCceEEEEeChhc-CCCCCceEEEEEECCHHHHHHHHHHHHhcCC-------------CCCHHH
Confidence 0 1111221 4578999999998 56555 899888665554432111111100 001113
Q ss_pred HHHHHHHHc--H-----------HHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 013675 397 AWAALMSLG--Q-----------EGYLENTKAIMEVSESIQKGLVLFPMFLP 435 (438)
Q Consensus 397 ~~aal~~~g--~-----------~g~~~~~~~~~~~a~~l~~~L~~~~g~~~ 435 (438)
+.++...+. . +-+++..++..+..+++.+.|+++||+++
T Consensus 290 q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 341 (427)
T 2hox_A 290 QLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSY 341 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEEC
T ss_pred HHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccc
Confidence 333333332 1 12345567788889999999998877764
No 229
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.46 E-value=4.1e-12 Score=130.10 Aligned_cols=224 Identities=12% Similarity=0.069 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHH---h-----------------cCCCCCeE
Q 013675 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRN---K-----------------RGITRPEM 229 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~---~-----------------~G~~~~~V 229 (438)
.++++++.+.++++++.+.+. + .+++|||||+..|+++++.+... . +|..+++|
T Consensus 109 ~~l~~~la~~l~~~~~~~~~~----v--~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~i 182 (472)
T 1ohv_A 109 ENFVEKLRESLLSVAPKGMSQ----L--ITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSI 182 (472)
T ss_dssp TTHHHHHHHTGGGGCCTTCCE----E--EEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEE
T ss_pred HHHHHHHHHHHHHhCCCCcCE----E--EEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeE
Confidence 356666666666666544443 5 89999999999999999865321 0 13224788
Q ss_pred EecCCCcCc-HHHHHhhcCcE-----------EEEeeCCC-CC-------------ccCHHHHHHhhcc------CcEEE
Q 013675 230 IIPVSAHSA-YDKAAQYFNIK-----------LWRVPVDK-EF-------------RADVKAIKKYINR------NTVLI 277 (438)
Q Consensus 230 iv~~~~h~s-~~~a~~~~Gi~-----------v~~v~~~~-~~-------------~~d~~~Le~~I~~------~t~~v 277 (438)
|+....|.. ...+....|.+ +..+++.. .+ ..|+++|+++|++ +|++|
T Consensus 183 i~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 262 (472)
T 1ohv_A 183 LSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGI 262 (472)
T ss_dssp EEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 888766444 44443333321 11223321 00 2378999999986 88999
Q ss_pred EEecCCCCCccccC----HHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCC----ccEEEeCCCCCCC
Q 013675 278 VGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQG----VTSISVDVHKYGL 349 (438)
Q Consensus 278 v~~~~~~~tG~idd----i~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~g----vdsis~s~hK~~~ 349 (438)
++...++++|.+.| +++|.++|++||+++|+|++|+|+.. .|. .+.+...| +|+++++ |...
T Consensus 263 ive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~-----~g~---~~~~~~~gv~~~~Di~t~s--K~~l 332 (472)
T 1ohv_A 263 IVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGS-----TGK---FWAHEHWGLDDPADVMTFS--KKMM 332 (472)
T ss_dssp EECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTT-----TSS---SSGGGGGCCSSCCSEEEEC--GGGS
T ss_pred EEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCC-----CCC---chhccccCCCCCCCEEEEc--cccc
Confidence 99888888998877 99999999999999999999986442 111 12222223 6888776 8721
Q ss_pred CCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCc--hHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHh
Q 013675 350 APKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGG--LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGL 427 (438)
Q Consensus 350 ~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~--~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L 427 (438)
+ .|+++ + +++.. ....+ ..++-.+. ..+++.++++.+.. .+..++..++.+++.+.|
T Consensus 333 ~---GG~~~-~-~~~~~----~~~~~---------~~~T~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L 391 (472)
T 1ohv_A 333 T---GGFFH-K-EEFRP----NAPYR---------IFNTWLGDPSKNLLLAEVINIIKR---EDLLSNAAHAGKVLLTGL 391 (472)
T ss_dssp S---EEEEE-C-GGGSC----SSSSS---------SCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHH
T ss_pred c---CCccC-c-hhhcc----ccccc---------ccCccCccHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHH
Confidence 2 25544 3 33311 00000 11121111 23344455554433 345677777888888887
Q ss_pred hcC
Q 013675 428 VLF 430 (438)
Q Consensus 428 ~~~ 430 (438)
+++
T Consensus 392 ~~l 394 (472)
T 1ohv_A 392 LDL 394 (472)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 230
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.42 E-value=3.1e-12 Score=128.82 Aligned_cols=219 Identities=16% Similarity=0.148 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHH-h----
Q 013675 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAA-Q---- 244 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~-~---- 244 (438)
.+...++.++++++++ +.+. + ++|+||++|+..+++++|... .+ ++|++..+.|..+...+ .
T Consensus 91 ~~~~~~l~~~l~~~~~-~~~~----v--~~~~~g~ea~~~al~~ar~~~---~~---~~vi~~~~~yhg~~~~~~~~~~~ 157 (424)
T 2e7u_A 91 SPLEVALAKKVKRAYP-FVDL----V--RFVNSGTEATMSALRLARGYT---GR---PYIVKFRGNYHGHADGLLVEAGS 157 (424)
T ss_dssp CHHHHHHHHHHHHHCT-TCCE----E--EEESSHHHHHHHHHHHHHHHH---CC---CEEEEETTCCCCCCGGGSEECCS
T ss_pred CHHHHHHHHHHHHhCC-CCCE----E--EEeCCHHHHHHHHHHHHHHhh---CC---CEEEEECCCcCCCcHHHHHhcCC
Confidence 3456677778888885 3333 5 899999999999999876431 22 57877777665433221 1
Q ss_pred ---------hcCc------EEEEeeCCCCCccCHHHHHHhhc---cCcEEEEEecCCCCCccccC----HHHHHHHHHHc
Q 013675 245 ---------YFNI------KLWRVPVDKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP----IQELGELALSH 302 (438)
Q Consensus 245 ---------~~Gi------~v~~v~~~~~~~~d~~~Le~~I~---~~t~~vv~~~~~~~tG~idd----i~~I~~la~~~ 302 (438)
..|+ ++..+|. .|+++|+++++ +++++|+++..++++|.+.| +++|.++ ++|
T Consensus 158 ~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~ 231 (424)
T 2e7u_A 158 GALTLGVPSSAGVPEEYAKLTLVLEY-----NDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAY 231 (424)
T ss_dssp SSCCBCEESSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGG
T ss_pred cccccCCCCCCCCCCccCCceEeCCC-----CCHHHHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHc
Confidence 1232 3455553 38999999997 45666666554455898877 9999999 999
Q ss_pred CCeEEEeccccchhhhhhhhcCCCCCCCccC--CCCccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCcc
Q 013675 303 GTCLHVDLCLGGFVLPFAKKLGYPIPPFDFS--VQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLY 380 (438)
Q Consensus 303 ~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~--~~gvdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~ 380 (438)
|+++++|++|+|+ .. |. .+... ....|+++ .+|.+.++..+|+++.++ ++.+..... +..+
T Consensus 232 g~~lI~DEv~~g~-~~-----g~---~~~~~~~~~~~di~s--~sK~l~~G~~~G~~~~~~-~~~~~~~~~-----~~~~ 294 (424)
T 2e7u_A 232 GVLLIADEVMTGF-RL-----AF---GGATELLGLKPDLVT--LGKILGGGLPAAAYAGRR-EIMEKVAPL-----GPVY 294 (424)
T ss_dssp TCEEEEECTTTTT-TS-----ST---THHHHHHTCCCSEEE--ECGGGGTTSSCEEEEECH-HHHTTBTTT-----SSBC
T ss_pred CCEEEEecCcccc-cc-----ch---hHHHHHhCCCcchhh--hhhhhhCCcceEEEEEcH-HHHhhhccc-----CCcc
Confidence 9999999999876 21 10 01111 11246664 469865556688888765 333221100 0000
Q ss_pred CCCCccCCCCCc--hHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 381 VSPTVAGSRPGG--LIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 381 ~~~~~~gsr~~~--~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
..++-.+. ..+++.++++.+.. .++..++..++.+++++.|+++
T Consensus 295 ----~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~ 340 (424)
T 2e7u_A 295 ----QAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGLKEV 340 (424)
T ss_dssp ----CCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHH
T ss_pred ----cCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHH
Confidence 01111111 12344445544322 2456777788888888888764
No 231
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.40 E-value=4.4e-12 Score=127.70 Aligned_cols=261 Identities=15% Similarity=0.145 Sum_probs=157.9
Q ss_pred HHHHHHHHHhhccCCCC-cccchhHHHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCC
Q 013675 146 SLINEACSMFAHTNPLH-LDIFQSVARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI 224 (438)
Q Consensus 146 ~~~~~~~~~~~~~n~~~-~~~~~~~~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~ 224 (438)
..+.++.......+..+ |....|..++.+.+.+++ +|-.... +.+..+.|.|||.|+..++..+..... .+|
T Consensus 65 ~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~---~g~~~~~--~~~~~~qt~ggtga~~~a~~~l~~~~~-~pg- 137 (420)
T 4h51_A 65 RVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKII---YGNTVEL--ENLVAVQTLSGTGAVSLGAKLLTRVFD-AET- 137 (420)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHH---HC---CG--GGEEEEEEEHHHHHHHHHHHHHTTTSC-TTT-
T ss_pred HHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHh---cCCCccc--cccceeeecCchHHHHHHHHHHHHhcC-CCC-
Confidence 34455544444433332 556667777776655443 3432111 113446789999999988876653211 256
Q ss_pred CCCeEEecCCCcCcHHHHHhhcCcE-EEEeeCC--CCCccCHHHHHHhhc---cCcEEEEEecCCCCCccccC---HHHH
Q 013675 225 TRPEMIIPVSAHSAYDKAAQYFNIK-LWRVPVD--KEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP---IQEL 295 (438)
Q Consensus 225 ~~~~Viv~~~~h~s~~~a~~~~Gi~-v~~v~~~--~~~~~d~~~Le~~I~---~~t~~vv~~~~~~~tG~idd---i~~I 295 (438)
++|++++++++++...++..|.+ +...+.. +++.+|.+.+.+.+. +++++++.+.|+||||...+ +++|
T Consensus 138 --d~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i 215 (420)
T 4h51_A 138 --TPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEI 215 (420)
T ss_dssp --SCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHH
T ss_pred --CEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Confidence 89999999999999999999997 4444442 367789998888774 56789999999999999865 7789
Q ss_pred HHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCCCC-CCCCCCcEEEEEecccccccc-----h
Q 013675 296 GELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKY-GLAPKGTSVVLYRNREIRKHQ-----F 369 (438)
Q Consensus 296 ~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~hK~-~~~p~g~g~l~~r~~~~~~~~-----~ 369 (438)
+++|++++++++.|.+|.++..--.+.....+ ........--+++.|+.|. +.....+|++....+...... .
T Consensus 216 ~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l 294 (420)
T 4h51_A 216 ASLMLAKHHQVFFDSAYQGYASGSLDTDAYAA-RLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVM 294 (420)
T ss_dssp HHHHHHHTCEEEEEESCTTTTTSCHHHHTHHH-HHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHhcCceEeeehhhhhhccCCcccchHHH-HhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHH
Confidence 99999999999999999876531000000000 0000111124666788896 334456999887655332211 0
Q ss_pred --hcccccCCCccCCCCccCCCCCchHHHHHHHHHHHc--------HHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 370 --VAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLG--------QEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 370 --~~~~~~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
.....|. .+. ..++..+...+. ++.++...+++.++++.|.+.|++.
T Consensus 295 ~~~~r~~~s------------~~p--~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~ 351 (420)
T 4h51_A 295 DSLIREEYT------------CPP--AHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRL 351 (420)
T ss_dssp HHHHHTTTS------------SCC--HHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhhcccC------------cch--HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0011111 111 112222222222 2345666777888888999988875
No 232
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.23 E-value=1.1e-10 Score=118.27 Aligned_cols=215 Identities=19% Similarity=0.202 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCC-cCcHHHHHhhc-----
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSA-HSAYDKAAQYF----- 246 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~-h~s~~~a~~~~----- 246 (438)
+.++.+.+++++... +. + .|+++||||++.|++.+|.+. | +++|+....+ |.........-
T Consensus 129 ~~~lae~l~~~~p~~-~~----v--~f~~SGsEA~e~AiklAr~~t----g--r~~ii~~~~~yHG~t~~~~~~~~~~~~ 195 (454)
T 4ao9_A 129 EGRLARLICERFPQI-EQ----L--RFTNSGTEANLMALTAALHFT----G--RRKIVVFSGGYHGGVLGFGARPSPTTV 195 (454)
T ss_dssp HHHHHHHHHHHSTTC-SE----E--EEESSHHHHHHHHHHHHHHHH----T--CCEEEEETTCBCSTTCBBSSSBCTTSC
T ss_pred HHHHHHHHHHhCCCC-CE----E--EEeCchHHHHHHHHHHHHhcc----c--CCeEEEEeCCcCCccccccccccCccC
Confidence 455666788877532 22 5 899999999999999999753 2 3567765554 33221111110
Q ss_pred CcEEEEeeCCCCCccCHHHHHHhhcc---CcEEEEEecCCCCCccccC----HHHHHHHHHHcCCeEEEeccccchhhhh
Q 013675 247 NIKLWRVPVDKEFRADVKAIKKYINR---NTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLGGFVLPF 319 (438)
Q Consensus 247 Gi~v~~v~~~~~~~~d~~~Le~~I~~---~t~~vv~~~~~~~tG~idd----i~~I~~la~~~~i~lhVD~a~gg~~~pf 319 (438)
......+|.+ |++++++.+++ ++++|++.......|.+.| +++|.++|++||+++++|+++.|-.-+
T Consensus 196 ~~~~~~~p~n-----d~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~- 269 (454)
T 4ao9_A 196 PFDFLVLPYN-----DAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTSRLAP- 269 (454)
T ss_dssp CSEEEEECTT-----CHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGGGGST-
T ss_pred CCCcccCCCc-----hHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcCCCcc-
Confidence 1234444443 78999998864 5788888888788898877 999999999999999999998752211
Q ss_pred hhhcCCCCCCCccCCCC--ccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCch--HH
Q 013675 320 AKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGL--IA 395 (438)
Q Consensus 320 ~~~~g~~~p~~~~~~~g--vdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~--ia 395 (438)
.+.....| .|+++++ |.+.++...|.+..+++ +.... .+ -.+..+. .++-.+.. .+
T Consensus 270 ---------~~a~e~~gv~PDi~t~g--K~lggG~Piga~~~~~e-i~~~~---~~-~~~~~~h----~~T~~gnPla~A 329 (454)
T 4ao9_A 270 ---------HGLANKLGIRSDLTTLG--KYIGGGMSFGAFGGRAD-VMALF---DP-RTGPLAH----SGTFNNNVMTMA 329 (454)
T ss_dssp ---------TCHHHHHTCCCSEEEEE--GGGGTTSSCEEEEECHH-HHGGG---CT-TTCSCCC----CCTTTTCHHHHH
T ss_pred ---------ccchhccCCCCcEEEec--cccCCCCcceeeeeHHH-HHHHH---hh-ccCCccc----cCCCCCCHHHHH
Confidence 11112223 3888776 66555566788777754 22211 00 0111111 11222222 33
Q ss_pred HHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhc
Q 013675 396 GAWAALMSLGQEGYLENTKAIMEVSESIQKGLVL 429 (438)
Q Consensus 396 ~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 429 (438)
+..++|+.+-++ +..++..++.++|+++|++
T Consensus 330 Aala~L~~l~~~---~~~~~~~~~g~~l~~~L~~ 360 (454)
T 4ao9_A 330 AGYAGLTKLFTP---EAAGALAERGEALRARLNA 360 (454)
T ss_dssp HHHHHHHHTSCH---HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc---ChhHHHHHHHHHHHHHHHH
Confidence 445566655433 3455566667777776654
No 233
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.21 E-value=2.4e-10 Score=116.66 Aligned_cols=235 Identities=13% Similarity=0.070 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCC-CCCeEEecCCC-cCcHHHHHhhcC--
Q 013675 172 FEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGI-TRPEMIIPVSA-HSAYDKAAQYFN-- 247 (438)
Q Consensus 172 ~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~-~~~~Viv~~~~-h~s~~~a~~~~G-- 247 (438)
.+.++.+.++++...+-+. + .|+++||||+..|++.+|.+... +|. .+.+||.-..+ |-...-+...-|
T Consensus 112 ~~~~lAe~L~~~~p~~~~~----v--~f~~sGsEA~e~AiKlAr~~~~~-~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~ 184 (473)
T 4e3q_A 112 QTVMLSEKLVEVSPFDSGR----V--FYTNSGSEANDTMVKMLWFLHAA-EGKPQKRKILTRWNAYHGVTAVSASMTGKP 184 (473)
T ss_dssp HHHHHHHHHHHHSSCSSCE----E--EEESSHHHHHHHHHHHHHHHHHH-TTCTTCCEEEEETTCCCCSSHHHHHHSCCG
T ss_pred HHHHHHHHHHhhCCCCccE----E--EEeCchHHHHHHHHHHHHHHHHh-cCCCCcceEEEeeceECCCccccccccccc
Confidence 3445677788888665443 5 89999999999999999876554 343 34567666555 444333333222
Q ss_pred ------c---EEEEeeCCC------CCcc-------CHHHHHHhhc----cCcEEEEEecCCCCCccccC----HHHHHH
Q 013675 248 ------I---KLWRVPVDK------EFRA-------DVKAIKKYIN----RNTVLIVGSAPGFPHGIIDP----IQELGE 297 (438)
Q Consensus 248 ------i---~v~~v~~~~------~~~~-------d~~~Le~~I~----~~t~~vv~~~~~~~tG~idd----i~~I~~ 297 (438)
. ....++... .+.. ..+++++.|. +++++|++.......|.+.| +++|.+
T Consensus 185 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~ 264 (473)
T 4e3q_A 185 YNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILP 264 (473)
T ss_dssp GGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHH
T ss_pred cccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHH
Confidence 1 344444321 1111 1345555553 35778888888887887755 899999
Q ss_pred HHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCCc--cEEEeCCCCCCCCC-CCcEEEEEecccccccchhcccc
Q 013675 298 LALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAP-KGTSVVLYRNREIRKHQFVAVTE 374 (438)
Q Consensus 298 la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gv--dsis~s~hK~~~~p-~g~g~l~~r~~~~~~~~~~~~~~ 374 (438)
+|++||+++++|+++.||.. .|. -+.+...|+ |+++++ |.+.++ ...|.++.+++-..... .....
T Consensus 265 lc~~~gilLI~DEV~tGfGR-----tG~---~fa~e~~gv~PDi~t~~--K~l~gG~~Pl~av~~~~~i~~~~~-~~~~~ 333 (473)
T 4e3q_A 265 ILRKYDIPVISDEVICGFGR-----TGN---TWGCVTYDFTPDAIISS--KNLTAGFFPMGAVILGPELSKRLE-TAIEA 333 (473)
T ss_dssp HHHHTTCCEEEECTTTSSST-----TSS---SCHHHHTTCCCSEEEEC--GGGGTTSSCCEEEEECHHHHHHHH-HHHHH
T ss_pred HhcccceEEeccCccccCCc-----ccc---hhHHHhcCCCCChHHhc--ccccCCCCCcccccccHHHHHHhc-ccccc
Confidence 99999999999999988753 121 222233343 888876 654333 56788888754222110 00000
Q ss_pred cCCCccCCCCccCCCCCchHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 375 WSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 375 ~~g~~~~~~~~~gsr~~~~ia~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
..+...|+..++...++.+++..+..-.-++..++..++.++|.++|+++
T Consensus 334 ------~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l 383 (473)
T 4e3q_A 334 ------IEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHI 383 (473)
T ss_dssp ------HSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHH
T ss_pred ------ccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHH
Confidence 00111222222222244444443322222345566667778888877654
No 234
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.80 E-value=2.4e-12 Score=131.25 Aligned_cols=222 Identities=15% Similarity=0.067 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCc-HHHHH---hh
Q 013675 170 ARFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSA-YDKAA---QY 245 (438)
Q Consensus 170 ~~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s-~~~a~---~~ 245 (438)
.+.+.++.+.++++++ ..+. + .++++||+|+..|++.+|... | +++||+...+|.. ...+. ..
T Consensus 139 ~~~~~~Lae~L~~~~p-~~~~----v--~~~nSGseA~~~Aik~ar~~t----g--r~~ii~~~~~yHG~~~~~~sg~~~ 205 (465)
T 2yky_A 139 TENEALFAEAVCDRFP-SIDL----V--RFTNSGTEANLMALATATAIT----G--RKTVLAFDGGYHGGLLNFASGHAP 205 (465)
Confidence 4456677778888884 2232 4 899999999999999987431 1 2678887766543 33222 12
Q ss_pred cCc--EEEEeeCCCCCccCHHHHHHhhc---cCcEEEEEecCCCCCccccC----HHHHHHHHHHcCCeEEEeccccchh
Q 013675 246 FNI--KLWRVPVDKEFRADVKAIKKYIN---RNTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCLHVDLCLGGFV 316 (438)
Q Consensus 246 ~Gi--~v~~v~~~~~~~~d~~~Le~~I~---~~t~~vv~~~~~~~tG~idd----i~~I~~la~~~~i~lhVD~a~gg~~ 316 (438)
.|+ .+..+|. -|+++|+++++ +++++|++...++++|.+.| +++|.++|++||+++++|++++ +-
T Consensus 206 ~g~~~~~~~~~~-----~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r 279 (465)
T 2yky_A 206 TNAPYHVVLGVY-----NDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SR 279 (465)
Confidence 244 2333332 37899999998 67888888776667997766 9999999999999999999998 52
Q ss_pred hhhhhhcCCCCCCCccCCCC--ccEEEeCCCCCCCCCCCcEEEEEecccccccchhcccccCCCccCCCCccCCCCCchH
Q 013675 317 LPFAKKLGYPIPPFDFSVQG--VTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLI 394 (438)
Q Consensus 317 ~pf~~~~g~~~p~~~~~~~g--vdsis~s~hK~~~~p~g~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~gsr~~~~i 394 (438)
. |. .+.....| .|+++ ..|++.++..+|+++.+++ +.+..... -.+..+...+..+.. ...
T Consensus 280 ~------g~---~~a~~~~gv~pDi~t--~sK~lg~G~piG~v~~~~~-i~~~l~~~---~~g~~~~~~T~~~np--la~ 342 (465)
T 2yky_A 280 L------SG---GGAQEMLGISADLTT--LGKYIGGGMSFGAFGGRRD-LMERFDPA---RDGAFAHAGTFNNNI--LTM 342 (465)
Confidence 1 10 11122223 36654 5699655556788776643 32211000 001011111111111 112
Q ss_pred HHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 013675 395 AGAWAALMSLGQEGYLENTKAIMEVSESIQKGLVLF 430 (438)
Q Consensus 395 a~~~aal~~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 430 (438)
++..++|+.+..+ +..++..++.++++++|+++
T Consensus 343 aAa~aaL~~l~~~---~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 2yky_A 343 SAGHAALTQIYTR---QAASDLSASGDRFRANLNRI 375 (465)
Confidence 3444556555333 45667777777777777654
No 235
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.16 E-value=4.2e-09 Score=106.97 Aligned_cols=169 Identities=21% Similarity=0.197 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCC-cCcHHHHHhhcC----
Q 013675 173 EAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSA-HSAYDKAAQYFN---- 247 (438)
Q Consensus 173 e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~-h~s~~~a~~~~G---- 247 (438)
+.++.+.+++++..+..+ .+ .|+++||||+..|++.+|.+. | +.+|+....+ |-...-+....+
T Consensus 109 ~~~lae~L~~~~p~~~~~---~v--~f~~sGsEA~e~AlklAr~~t----~--r~~ii~~~~~yHG~t~~als~t~~~~~ 177 (456)
T 4atq_A 109 YVAVTEQLNRLTPGDHAK---RT--VLFNSGAEAVENAVKVARLAT----G--RDAVVAFDHAYHGRTNLTMALTAKAMP 177 (456)
T ss_dssp HHHHHHHHHHHSSCSSCE---EE--EEESSHHHHHHHHHHHHHHHH----C--CCEEEEETTCCCCSSHHHHHHCCCCTT
T ss_pred HHHHHHHHHHhCCCCCCc---EE--EEeCChHHHHHHHHHHHhhhh----c--CCeEEEEecccCCccccccccccCccc
Confidence 345666788887654322 14 789999999999999998653 2 3567766655 444333332221
Q ss_pred ---------cEEEEeeCCC------CCccCHHHHHHhh-------c-cCcEEEEEecCCCCCccccC----HHHHHHHHH
Q 013675 248 ---------IKLWRVPVDK------EFRADVKAIKKYI-------N-RNTVLIVGSAPGFPHGIIDP----IQELGELAL 300 (438)
Q Consensus 248 ---------i~v~~v~~~~------~~~~d~~~Le~~I-------~-~~t~~vv~~~~~~~tG~idd----i~~I~~la~ 300 (438)
-.+..+|... ....+.+.+++.+ . +++++|++.......|.+.| +++|.++|+
T Consensus 178 ~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~ 257 (456)
T 4atq_A 178 YKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAK 257 (456)
T ss_dssp TTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHH
T ss_pred cccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHh
Confidence 1466676531 1112333333333 2 35788888888777787755 899999999
Q ss_pred HcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCCc--cEEEeCCCCCCCCCCCcEEEEEecc
Q 013675 301 SHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGV--TSISVDVHKYGLAPKGTSVVLYRNR 362 (438)
Q Consensus 301 ~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gv--dsis~s~hK~~~~p~g~g~l~~r~~ 362 (438)
+||+++++|+++.||.. .|. -+.+...|+ |+++++ |.+.+....|.++.+++
T Consensus 258 ~~gillI~DEV~tG~GR-----tG~---~~a~e~~gv~PDivt~g--K~lggg~P~~av~~~~~ 311 (456)
T 4atq_A 258 EKGIVFIADEVQSGFCR-----TGE---WFAVDHEGVVPDIITMA--KGIAGGLPLSAITGRAD 311 (456)
T ss_dssp HHTCEEEEECTTTTTTT-----TSS---SSGGGGTTCCCSEEEEC--GGGGTTSSCEEEEEEHH
T ss_pred hcCCceEecccccccCC-----ccc---cccccccCCCCchhhhh--hcccCcCCceeeEecHH
Confidence 99999999999988653 222 233444454 999887 55445556788888754
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.68 E-value=8.8e-07 Score=96.27 Aligned_cols=171 Identities=13% Similarity=0.111 Sum_probs=103.9
Q ss_pred HHHHHHHHHhCCC-CCCCCCccceeEcCChHHHHHHHHHHHH-HHHHHhcCC---------CCCeEEecCCC-cCcHHHH
Q 013675 175 EVIAMTAALLGNK-EKASGGQVCGNMTSGGTESILLAVKSSR-DYMRNKRGI---------TRPEMIIPVSA-HSAYDKA 242 (438)
Q Consensus 175 ~~~~~~a~l~g~~-~~~~~~~v~g~~t~ggt~a~~~al~a~~-~~~~~~~G~---------~~~~Viv~~~~-h~s~~~a 242 (438)
++.+.++++++.+ .+. + .|+++||+|+..|++.++ .+.. .+|. .+.+||....+ |.....+
T Consensus 428 ~Lae~L~~~~p~~~l~~----v--ff~~SGSeA~E~AlK~A~r~~~~-~~g~~~~~~~~~~~r~~iI~~~~syHG~T~ga 500 (831)
T 4a0g_A 428 KCAELLLDGVGKGWASR----V--YFSDNGSTAIEIALKMAFRKFCV-DHNFCEATEEEKHIVVKVIALRGSYHGDTLGA 500 (831)
T ss_dssp HHHHHHHHTTTTTTCCE----E--EEESSHHHHHHHHHHHHHHHHHH-TTTC---------CCEEEEEETTCCCCSSHHH
T ss_pred HHHHHHHHhCCCCCCCE----E--EECCChhHHHHHHHHHHHHHHHh-hcCCCccccccccCccEEEEecCCcccCceee
Confidence 5556788887643 222 5 899999999999999994 3332 2332 24567765554 6555555
Q ss_pred HhhcCcE----------------------------EEEeeCCCCCc---------cC------------------HHHHH
Q 013675 243 AQYFNIK----------------------------LWRVPVDKEFR---------AD------------------VKAIK 267 (438)
Q Consensus 243 ~~~~Gi~----------------------------v~~v~~~~~~~---------~d------------------~~~Le 267 (438)
+..-|.. +..++....++ -| .++|+
T Consensus 501 ls~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 580 (831)
T 4a0g_A 501 MEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLS 580 (831)
T ss_dssp HHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHH
T ss_pred eeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHH
Confidence 5443310 11223221100 01 26778
Q ss_pred Hhhc--------cCcEEEEEecC-CCCCccccC----HHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCC
Q 013675 268 KYIN--------RNTVLIVGSAP-GFPHGIIDP----IQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSV 334 (438)
Q Consensus 268 ~~I~--------~~t~~vv~~~~-~~~tG~idd----i~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~ 334 (438)
+.|+ +++++|++... ....|.+.+ +++|.++|++||+++++|+++.||.. .|. .+....
T Consensus 581 ~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGR-----tG~---~fa~e~ 652 (831)
T 4a0g_A 581 KHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWR-----LGV---ETTTEL 652 (831)
T ss_dssp HHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTT-----TSB---SSTHHH
T ss_pred HHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCcccccc-----CCC---chhhHh
Confidence 8775 24667777765 676777754 89999999999999999999987643 111 121122
Q ss_pred CC--ccEEEeCCCCCCCCC-CCcEEEEEecc
Q 013675 335 QG--VTSISVDVHKYGLAP-KGTSVVLYRNR 362 (438)
Q Consensus 335 ~g--vdsis~s~hK~~~~p-~g~g~l~~r~~ 362 (438)
.| .|+++++ |.+.+. ...|+++.+++
T Consensus 653 ~gv~PDiitls--K~L~gG~~Plgav~~~~~ 681 (831)
T 4a0g_A 653 LGCKPDIACFA--KLLTGGMVPLAVTLATDA 681 (831)
T ss_dssp HSSCCSEEEEC--GGGGTTSSCCEEEEECHH
T ss_pred cCCCCcEEEEe--cccccCccCcEEEEECHH
Confidence 23 3787755 775443 35688887754
No 237
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=56.90 E-value=65 Score=29.50 Aligned_cols=75 Identities=16% Similarity=0.278 Sum_probs=48.5
Q ss_pred eEEecCCCcCcHHHHHhhcCcEEEEee-CCCCCccCHHHHHHhhc----cCcEEEEEecCCCCCccccCHHHHHHHHHHc
Q 013675 228 EMIIPVSAHSAYDKAAQYFNIKLWRVP-VDKEFRADVKAIKKYIN----RNTVLIVGSAPGFPHGIIDPIQELGELALSH 302 (438)
Q Consensus 228 ~Viv~~~~h~s~~~a~~~~Gi~v~~v~-~~~~~~~d~~~Le~~I~----~~t~~vv~~~~~~~tG~iddi~~I~~la~~~ 302 (438)
+.++ +.|.+|.-.++.+|++.+.+. +.++....+.+|.+.++ .+..+|+.. ++.+. ...+.|.++|++.
T Consensus 164 ~~~v--t~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e-~~~~~---~~~~~l~~~a~~~ 237 (282)
T 3mfq_A 164 RYLV--TPHDAFNYFAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIFTE-STTNP---ERMKKLQEAVKAK 237 (282)
T ss_dssp CEEE--CSSSCCHHHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEECB-TTSCT---HHHHHHHHHHHTT
T ss_pred cEEE--EECchHHHHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEe-CCCCh---HHHHHHHHHHHhc
Confidence 4444 358888889999999987553 33344566676666654 356677644 33211 1267888899999
Q ss_pred CCeEEE
Q 013675 303 GTCLHV 308 (438)
Q Consensus 303 ~i~lhV 308 (438)
|+.+.+
T Consensus 238 g~~v~~ 243 (282)
T 3mfq_A 238 GGQVEV 243 (282)
T ss_dssp SCCCEE
T ss_pred CCceEE
Confidence 987644
No 238
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=54.26 E-value=90 Score=26.97 Aligned_cols=111 Identities=14% Similarity=0.119 Sum_probs=74.4
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhc-CcEEEEeeCC-----C-CCccCHHHHHHhh
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYF-NIKLWRVPVD-----K-EFRADVKAIKKYI 270 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~-Gi~v~~v~~~-----~-~~~~d~~~Le~~I 270 (438)
.|-.-|.+-....+..+.++... .|+ +.|++++..-..-.++.+.+ |++++.|... + ...++.+..+++-
T Consensus 19 YF~~~G~eNT~~tl~la~era~e-~~I--k~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 95 (201)
T 1vp8_A 19 YFNKPGRENTEETLRLAVERAKE-LGI--KHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELR 95 (201)
T ss_dssp EESSCSGGGHHHHHHHHHHHHHH-HTC--CEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred EecCCCcccHHHHHHHHHHHHHH-cCC--CEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 55566666556666666665544 354 57888888877777888776 7788877643 2 4567877777776
Q ss_pred ccCcEEEEEecCCCC--------CccccCHHHHHHHHH-Hc--CCeEEEecc
Q 013675 271 NRNTVLIVGSAPGFP--------HGIIDPIQELGELAL-SH--GTCLHVDLC 311 (438)
Q Consensus 271 ~~~t~~vv~~~~~~~--------tG~iddi~~I~~la~-~~--~i~lhVD~a 311 (438)
+.....+..++.-.. .|-+.|.+-|++..+ -. |+.+.|..+
T Consensus 96 ~~G~~V~t~tH~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~ 147 (201)
T 1vp8_A 96 KRGAKIVRQSHILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVCVEIT 147 (201)
T ss_dssp HTTCEEEECCCTTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred hCCCEEEEEeccccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCceEEEEEe
Confidence 677888888887433 445678888888888 33 455544433
No 239
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=50.97 E-value=7.4 Score=38.56 Aligned_cols=31 Identities=16% Similarity=0.103 Sum_probs=28.5
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
.++..|+.++++++.+-||++||.|++|.++
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 5667899999999999999999999999985
No 240
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=49.06 E-value=1.7e+02 Score=27.15 Aligned_cols=71 Identities=17% Similarity=0.158 Sum_probs=45.4
Q ss_pred CeEEecCCCcCcHHHHHhhcCcEEEEeeC-CCCCccCHHHHHHhhc---c-CcEEEEEecCCCCCccccCHHHHHHHHHH
Q 013675 227 PEMIIPVSAHSAYDKAAQYFNIKLWRVPV-DKEFRADVKAIKKYIN---R-NTVLIVGSAPGFPHGIIDPIQELGELALS 301 (438)
Q Consensus 227 ~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~-~~~~~~d~~~Le~~I~---~-~t~~vv~~~~~~~tG~iddi~~I~~la~~ 301 (438)
..+++ .|.+|.-.++.+|++...+.- .++....+.+|.+.++ + +..+|+ ..++.+ -+.+..|+++
T Consensus 191 ~~~v~---~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If-~e~~~~------~~~~~~ia~e 260 (312)
T 2o1e_A 191 KEFIT---QHTAFGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIY-FEEIAS------SKVADTLASE 260 (312)
T ss_dssp CEEEE---SSCTTHHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEE-CSSCCC------HHHHHHHHHH
T ss_pred CEEEE---ECCchHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEE-EeCCCC------hHHHHHHHHH
Confidence 45555 488888899999999776542 3345667777766654 3 455554 444432 2445566888
Q ss_pred cCCeEE
Q 013675 302 HGTCLH 307 (438)
Q Consensus 302 ~~i~lh 307 (438)
.|+.+.
T Consensus 261 ~g~~v~ 266 (312)
T 2o1e_A 261 IGAKTE 266 (312)
T ss_dssp TCCEEE
T ss_pred hCCcEE
Confidence 898763
No 241
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=46.30 E-value=9.5 Score=37.69 Aligned_cols=32 Identities=13% Similarity=0.037 Sum_probs=28.5
Q ss_pred cCCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 281 APGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 281 ~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
..+...|+.++++++.+-||++||.|++|.++
T Consensus 56 ~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 56 ELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp CSCBTTBCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ccCCCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 34556899999999999999999999999985
No 242
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=45.39 E-value=1.8e+02 Score=26.50 Aligned_cols=71 Identities=17% Similarity=0.226 Sum_probs=43.4
Q ss_pred CeEEecCCCcCcHHHHHhhcCcEEEEeeC-CCCCccCHHHHHHhh---cc-CcEEEEEecCCCCCccccCHHHHHHHHHH
Q 013675 227 PEMIIPVSAHSAYDKAAQYFNIKLWRVPV-DKEFRADVKAIKKYI---NR-NTVLIVGSAPGFPHGIIDPIQELGELALS 301 (438)
Q Consensus 227 ~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~-~~~~~~d~~~Le~~I---~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~ 301 (438)
..+++ .|.+|.-.++.+|++.+.+.- .++....+.+|.+.+ .+ +..+|+.. ++++. +.+..++++
T Consensus 180 ~~~v~---~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e-~~~~~------~~~~~la~~ 249 (286)
T 3gi1_A 180 KTFVT---QHTAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAE-DNVNP------KIAHAIAKS 249 (286)
T ss_dssp CEEEE---EESCCHHHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEEC-TTSCT------HHHHHHHHT
T ss_pred CEEEE---ECCchHHHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEe-CCCCh------HHHHHHHHH
Confidence 44554 588888899999999877643 334456666666555 33 45666554 44332 333456888
Q ss_pred cCCeEE
Q 013675 302 HGTCLH 307 (438)
Q Consensus 302 ~~i~lh 307 (438)
.|+.+.
T Consensus 250 ~g~~v~ 255 (286)
T 3gi1_A 250 TGAKVK 255 (286)
T ss_dssp TTCEEE
T ss_pred hCCeEE
Confidence 888865
No 243
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=42.05 E-value=13 Score=37.06 Aligned_cols=31 Identities=16% Similarity=0.005 Sum_probs=27.5
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|+.++++++.+-||++||.|++|.+.
T Consensus 71 id~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3445799999999999999999999999885
No 244
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=42.03 E-value=30 Score=27.48 Aligned_cols=43 Identities=12% Similarity=0.049 Sum_probs=30.4
Q ss_pred HHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEecccc
Q 013675 263 VKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 263 ~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~g 313 (438)
++.++++....++.++++.+. .+ +++.++|+++|+.++ ..|.+
T Consensus 72 ~~~v~e~~~~g~k~v~~~~G~-----~~--~e~~~~a~~~Girvv-~nC~g 114 (122)
T 3ff4_A 72 LSEYNYILSLKPKRVIFNPGT-----EN--EELEEILSENGIEPV-IGCTL 114 (122)
T ss_dssp GGGHHHHHHHCCSEEEECTTC-----CC--HHHHHHHHHTTCEEE-ESCHH
T ss_pred HHHHHHHHhcCCCEEEECCCC-----Ch--HHHHHHHHHcCCeEE-CCcCe
Confidence 455666666677777776553 22 699999999999987 46643
No 245
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=41.57 E-value=67 Score=30.13 Aligned_cols=53 Identities=9% Similarity=0.060 Sum_probs=31.7
Q ss_pred eEcCChH---HHHHHHHHHHHHHHHHhcCCCCCeEEecCCCc-----------CcHHHHHhhcCcEEEEeeCCC
Q 013675 198 NMTSGGT---ESILLAVKSSRDYMRNKRGITRPEMIIPVSAH-----------SAYDKAAQYFNIKLWRVPVDK 257 (438)
Q Consensus 198 ~~t~ggt---~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h-----------~s~~~a~~~~Gi~v~~v~~~~ 257 (438)
+++.|+| .+.-+|..+.. .|++ -.|++|...- ......++.+|++++.++-+.
T Consensus 70 vv~~G~ssGN~g~alA~~a~~------~G~~-~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~ 136 (341)
T 1f2d_A 70 LVSIGGRQSNQTRMVAALAAK------LGKK-CVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGF 136 (341)
T ss_dssp EEEEEETTCHHHHHHHHHHHH------HTCE-EEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCC
T ss_pred EEEcCCcchHHHHHHHHHHHH------hCCc-eEEEeccCCCccccccccccccccHHHHHhCCCEEEEeCCcc
Confidence 5564444 44444444433 3431 3577776553 226778899999999887543
No 246
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=41.17 E-value=22 Score=30.88 Aligned_cols=47 Identities=23% Similarity=0.331 Sum_probs=36.6
Q ss_pred CHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCC--eEEEecccc
Q 013675 262 DVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGT--CLHVDLCLG 313 (438)
Q Consensus 262 d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i--~lhVD~a~g 313 (438)
|.++|+++++.+...+++- +|.+..++++.+.++++|- .+|+|-+.|
T Consensus 18 ~~~~l~~al~s~~~~ifll-----~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~G 66 (192)
T 3kts_A 18 NQKDMEKILELDLTYMVML-----ETHVAQLKALVKYAQAGGKKVLLHADLVNG 66 (192)
T ss_dssp SSHHHHHHTTSSCCEEEEC-----SEETTTHHHHHHHHHHTTCEEEEEGGGEET
T ss_pred CHHHHHHHHcCCCCEEEEe-----cCcHHHHHHHHHHHHHcCCeEEEecCchhc
Confidence 6799999998765555543 4678899999999999985 478887754
No 247
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=41.14 E-value=16 Score=34.85 Aligned_cols=52 Identities=13% Similarity=0.140 Sum_probs=40.4
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCC
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD 256 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~ 256 (438)
+-+++|..+.-+|..+.+ .|++ -.|++|...-..-....+.+|.+|+.++..
T Consensus 91 v~aSsGN~g~alA~~aa~------~G~~-~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~ 142 (344)
T 3vc3_A 91 IEPTSGNMGISMAFMAAM------KGYK-MVLTMPSYTSLERRVTMRAFGAELILTDPA 142 (344)
T ss_dssp EEECSSHHHHHHHHHHHH------HTCE-EEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEeCCcHHHHHHHHHHHH------cCCc-EEEEECCCChHHHHHHHHHcCCEEEEECCC
Confidence 566888888888887765 4432 468889888777888899999999988753
No 248
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=40.89 E-value=14 Score=36.83 Aligned_cols=31 Identities=10% Similarity=-0.048 Sum_probs=27.4
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|+.++++++.+-||++||.|++|.+.
T Consensus 73 idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 103 (480)
T 1ud2_A 73 VRTKYGTKAQLERAIGSLKSNDINVYGDVVM 103 (480)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3445799999999999999999999999885
No 249
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=40.39 E-value=14 Score=36.27 Aligned_cols=31 Identities=16% Similarity=0.134 Sum_probs=27.5
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|..++++++.+-||++|+.|++|.+.
T Consensus 79 id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 79 VETRFGSKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3455799999999999999999999999885
No 250
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=40.33 E-value=14 Score=36.79 Aligned_cols=31 Identities=13% Similarity=0.034 Sum_probs=27.5
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|+.++++++.+-||++||.|++|.+.
T Consensus 75 idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 105 (485)
T 1wpc_A 75 VRTKYGTRSQLQAAVTSLKNNGIQVYGDVVM 105 (485)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3445799999999999999999999999885
No 251
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=39.81 E-value=13 Score=36.64 Aligned_cols=30 Identities=20% Similarity=0.128 Sum_probs=27.0
Q ss_pred CCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 283 GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 283 ~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+...|+.++++++.+-||++|+.|++|.+.
T Consensus 63 dp~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 63 KAEYGSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 445799999999999999999999999885
No 252
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=39.79 E-value=2.2e+02 Score=25.98 Aligned_cols=66 Identities=6% Similarity=0.075 Sum_probs=43.4
Q ss_pred CcCcHHHHHhhcCcEEEEee-CCCCCccCHHHHHHhhc---c-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEE
Q 013675 235 AHSAYDKAAQYFNIKLWRVP-VDKEFRADVKAIKKYIN---R-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH 307 (438)
Q Consensus 235 ~h~s~~~a~~~~Gi~v~~v~-~~~~~~~d~~~Le~~I~---~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lh 307 (438)
.|.+|.-.++.+|++...+. +.++....+.+|.+.++ + +..+|+.....+ . +.+..++++.|+.+.
T Consensus 189 ~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~-~------~~~~~ia~~~g~~v~ 259 (294)
T 3hh8_A 189 SEGCFKYFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVESSVD-R------RPMETVSKDSGIPIY 259 (294)
T ss_dssp EESCCHHHHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHSCCSCEEEETTSC-S------HHHHHHHHHHCCCEE
T ss_pred ECChHHHHHHHcCCceeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC-c------HHHHHHHHHhCCcEE
Confidence 58888888999999877664 33445566666666554 3 566666544322 2 345677888998875
No 253
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=39.31 E-value=15 Score=37.01 Aligned_cols=31 Identities=13% Similarity=0.028 Sum_probs=27.4
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|+.++++++.+-||++||.|++|.+.
T Consensus 74 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 74 VRTKYGTKAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3445799999999999999999999999885
No 254
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=38.99 E-value=40 Score=29.43 Aligned_cols=37 Identities=8% Similarity=0.100 Sum_probs=31.7
Q ss_pred ccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEE
Q 013675 271 NRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH 307 (438)
Q Consensus 271 ~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lh 307 (438)
.-.+..|++.-..++.|.....+++.++|++||++++
T Consensus 157 Gl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~ii 193 (204)
T 1tks_A 157 GLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKII 193 (204)
T ss_dssp TSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEE
T ss_pred CCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEE
Confidence 3467888888776778999999999999999999876
No 255
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=38.80 E-value=2e+02 Score=26.06 Aligned_cols=71 Identities=14% Similarity=0.222 Sum_probs=42.4
Q ss_pred CeEEecCCCcCcHHHHHhhcCcEEEEee-CCCCCccCHHHHHHhh---cc-CcEEEEEecCCCCCccccCHHHHHHHHHH
Q 013675 227 PEMIIPVSAHSAYDKAAQYFNIKLWRVP-VDKEFRADVKAIKKYI---NR-NTVLIVGSAPGFPHGIIDPIQELGELALS 301 (438)
Q Consensus 227 ~~Viv~~~~h~s~~~a~~~~Gi~v~~v~-~~~~~~~d~~~Le~~I---~~-~t~~vv~~~~~~~tG~iddi~~I~~la~~ 301 (438)
..+++ .|.+|.-.++.+|++...+. +.++....+.+|.+.+ .+ +..+|+.. ++.+. +.+..++++
T Consensus 178 ~~~v~---~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e-~~~~~------~~~~~ia~~ 247 (284)
T 3cx3_A 178 KTFVT---QHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTE-SNASS------KVAETLVKS 247 (284)
T ss_dssp CCEEE---EESCCHHHHHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHHTTCCCEEEC-SSSCC------HHHHHHHSS
T ss_pred CEEEE---ECCchHHHHHHcCCEEeeccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEEe-CCCCc------HHHHHHHHH
Confidence 34554 47888888999999877654 3334455555555554 44 45555444 43322 334456788
Q ss_pred cCCeEE
Q 013675 302 HGTCLH 307 (438)
Q Consensus 302 ~~i~lh 307 (438)
.|+.+.
T Consensus 248 ~g~~v~ 253 (284)
T 3cx3_A 248 TGVGLK 253 (284)
T ss_dssp SSCCEE
T ss_pred cCCeEE
Confidence 887753
No 256
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=38.50 E-value=13 Score=37.36 Aligned_cols=30 Identities=23% Similarity=0.231 Sum_probs=27.0
Q ss_pred CCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 283 GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 283 ~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+...|+.++++++.+-||++||.|+.|.++
T Consensus 73 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 73 DPQYGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 445799999999999999999999999885
No 257
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=38.41 E-value=16 Score=36.89 Aligned_cols=29 Identities=10% Similarity=-0.028 Sum_probs=27.1
Q ss_pred CCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 284 FPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 284 ~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
...|+.++++++.+-||++||.|++|.++
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 115 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVVP 115 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 66899999999999999999999999885
No 258
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=37.90 E-value=13 Score=36.86 Aligned_cols=31 Identities=23% Similarity=0.245 Sum_probs=27.6
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|+.++++++.+-||++|+.|++|.+.
T Consensus 90 idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (478)
T 2guy_A 90 LNENYGTADDLKALSSALHERGMYLMVDVVA 120 (478)
T ss_dssp ECTTSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3455799999999999999999999999885
No 259
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=37.51 E-value=2.2e+02 Score=25.27 Aligned_cols=94 Identities=17% Similarity=0.138 Sum_probs=55.9
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEE-----ecC---------CCcCcHHHHHhhcCcEEEEeeCCCCCccCH
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMI-----IPV---------SAHSAYDKAAQYFNIKLWRVPVDKEFRADV 263 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Vi-----v~~---------~~h~s~~~a~~~~Gi~v~~v~~~~~~~~d~ 263 (438)
+..|||-.|...+..+.. .| -+|+ .+. ..+....+.|+.+|+.+..+++.....--.
T Consensus 9 vl~SGGkDSs~al~~l~~------~G---~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~ 79 (237)
T 3rjz_A 9 VLYSGGKDSNYALYWAIK------NR---FSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEV 79 (237)
T ss_dssp EECCSSHHHHHHHHHHHH------TT---CEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CH
T ss_pred EEecCcHHHHHHHHHHHH------cC---CeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHH
Confidence 788999999988777654 45 2332 111 123446778889999999888764323346
Q ss_pred HHHHHhhcc-CcEEEEEecCCCCCcccc--C-HHHHHHHHHHcCCeEE
Q 013675 264 KAIKKYINR-NTVLIVGSAPGFPHGIID--P-IQELGELALSHGTCLH 307 (438)
Q Consensus 264 ~~Le~~I~~-~t~~vv~~~~~~~tG~id--d-i~~I~~la~~~~i~lh 307 (438)
++|.+++.+ ....++ +|.++ . -..+-.+|.+.|+..+
T Consensus 80 e~l~~~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 80 EDLKRVLSGLKIQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HHHHHHHTTSCCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 778887764 222332 45553 2 3567788888887654
No 260
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=37.02 E-value=85 Score=28.55 Aligned_cols=67 Identities=13% Similarity=0.058 Sum_probs=41.6
Q ss_pred HHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEE-Eec
Q 013675 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH-VDL 310 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lh-VD~ 310 (438)
+.++++..|.++.....+.+..-..+.++..+..++..|++..... +......+.+++.|++++ +|.
T Consensus 25 i~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~-----~~~~~~~~~~~~~giPvV~~~~ 92 (330)
T 3uug_A 25 IVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDG-----TTLSDVLKQAGEQGIKVIAYDR 92 (330)
T ss_dssp HHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSG-----GGGHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHHcCCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCc-----hhHHHHHHHHHHCCCCEEEECC
Confidence 4456667788887776543333334566777777777777654321 234556667778898864 443
No 261
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=36.97 E-value=15 Score=36.09 Aligned_cols=31 Identities=16% Similarity=0.183 Sum_probs=27.3
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
.+...|..++++++.+-||++|+.|++|.+.
T Consensus 76 i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 76 INPEYGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp CCGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3445788999999999999999999999885
No 262
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=36.54 E-value=15 Score=35.72 Aligned_cols=29 Identities=14% Similarity=0.091 Sum_probs=26.4
Q ss_pred CCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 284 FPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 284 ~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
...|..++++++.+-||++|+.|++|.+.
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 91 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIVI 91 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 44689999999999999999999999885
No 263
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=35.90 E-value=1.5e+02 Score=25.36 Aligned_cols=65 Identities=9% Similarity=0.006 Sum_probs=45.7
Q ss_pred HHHhhcCcEEEEeeCCCCCccCHHHHHHhhc-cCcEEEEEecCCCCCccccCHHHHHHHHHHcC----CeEEEecc
Q 013675 241 KAAQYFNIKLWRVPVDKEFRADVKAIKKYIN-RNTVLIVGSAPGFPHGIIDPIQELGELALSHG----TCLHVDLC 311 (438)
Q Consensus 241 ~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~-~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~----i~lhVD~a 311 (438)
...+..|.+++.+..+ +.++++.+++. .++.+|.++.-.+ .....+.++.+.+++.+ +++++=|.
T Consensus 110 ~~l~~~G~~v~~LG~~----vp~~~l~~~~~~~~~d~v~lS~~~~--~~~~~~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 110 MMLESGGFTVYNLGVD----IEPGKFVEAVKKYQPDIVGMSALLT--TTMMNMKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp HHHHHTTCEEEECCSS----BCHHHHHHHHHHHCCSEEEEECCSG--GGTHHHHHHHHHHHHTTCGGGCEEEEEST
T ss_pred HHHHHCCCEEEECCCC----CCHHHHHHHHHHcCCCEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEECC
Confidence 3445559999877643 67888877775 4777888887644 35667888888888765 77777655
No 264
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=35.58 E-value=1.3e+02 Score=27.89 Aligned_cols=53 Identities=8% Similarity=0.130 Sum_probs=34.3
Q ss_pred eEcCChH---HHHHHHHHHHHHHHHHhcCCCCCeEEecCCC-cCcHHHHHhhcCcEEEEeeCCC
Q 013675 198 NMTSGGT---ESILLAVKSSRDYMRNKRGITRPEMIIPVSA-HSAYDKAAQYFNIKLWRVPVDK 257 (438)
Q Consensus 198 ~~t~ggt---~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~-h~s~~~a~~~~Gi~v~~v~~~~ 257 (438)
+++.|+| .+.-+|..+.. .|++ -.|++|... -....+.++.+|++++.++-+.
T Consensus 73 vv~~G~ssGN~g~alA~~a~~------~G~~-~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~~ 129 (325)
T 1j0a_A 73 VITVGAVHSNHAFVTGLAAKK------LGLD-AILVLRGKEELKGNYLLDKIMGIETRVYDAKD 129 (325)
T ss_dssp EEEECCTTCHHHHHHHHHHHH------TTCE-EEEEEESCCCSCHHHHHHHHTTCEEEEESCCS
T ss_pred EEEcCCcchHHHHHHHHHHHH------hCCc-EEEEECCCCCCCchHHHHHHCCCEEEEeCcch
Confidence 5664444 44444444332 4532 367888877 6667788899999999987643
No 265
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=35.57 E-value=1.3e+02 Score=26.73 Aligned_cols=80 Identities=3% Similarity=-0.003 Sum_probs=42.4
Q ss_pred EEecCCCcCc-------HHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHH
Q 013675 229 MIIPVSAHSA-------YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALS 301 (438)
Q Consensus 229 Viv~~~~h~s-------~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~ 301 (438)
++++...++- +.++++..|.++.....+.+..-..+.++..++.+...+++..... ...++..+..+.+++
T Consensus 20 vi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--~~~~~~~~~~~~~~~ 97 (298)
T 3tb6_A 20 VLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKS--ALQTPNIGYYLNLEK 97 (298)
T ss_dssp EEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSST--TSCCTTHHHHHHHHH
T ss_pred EEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccc--cccCCcHHHHHHHHh
Confidence 4555555443 3445556688777776553332233455555566666666644322 122234455555666
Q ss_pred cCCeEE-Eec
Q 013675 302 HGTCLH-VDL 310 (438)
Q Consensus 302 ~~i~lh-VD~ 310 (438)
.+++++ +|.
T Consensus 98 ~~iPvV~~~~ 107 (298)
T 3tb6_A 98 NGIPFAMINA 107 (298)
T ss_dssp TTCCEEEESS
T ss_pred cCCCEEEEec
Confidence 787754 443
No 266
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=35.56 E-value=15 Score=36.06 Aligned_cols=31 Identities=16% Similarity=0.052 Sum_probs=27.4
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|+.++++++.+-||++|+.|+.|.++
T Consensus 74 idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~ 104 (424)
T 2dh2_A 74 IDPNFGSKEDFDSLLQSAKKKSIRVILDLTP 104 (424)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 3445799999999999999999999999885
No 267
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=35.36 E-value=49 Score=30.21 Aligned_cols=84 Identities=14% Similarity=0.133 Sum_probs=52.5
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhcc-----
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR----- 272 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~----- 272 (438)
++.+||+.++=.++.-... +.| -+|++..-.-....+.++.+|.++..+.+|-. |.+++++.+++
T Consensus 32 alVTGas~GIG~aiA~~la----~~G---a~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~---~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 32 AVITGATSGIGLAAAKRFV----AEG---ARVFITGRRKDVLDAAIAEIGGGAVGIQADSA---NLAELDRLYEKVKAEA 101 (273)
T ss_dssp EEEESCSSHHHHHHHHHHH----HTT---CEEEEEESCHHHHHHHHHHHCTTCEEEECCTT---CHHHHHHHHHHHHHHH
T ss_pred EEEeCcCCHHHHHHHHHHH----HCC---CEEEEEECCHHHHHHHHHHcCCCeEEEEecCC---CHHHHHHHHHHHHHHc
Confidence 5666677777665443221 367 67776655545566777777877777777643 55555555542
Q ss_pred -CcEEEEEecCCCCCccccC
Q 013675 273 -NTVLIVGSAPGFPHGIIDP 291 (438)
Q Consensus 273 -~t~~vv~~~~~~~tG~idd 291 (438)
+.-.++-+++..+.+.+.+
T Consensus 102 G~iDiLVNNAG~~~~~~~~~ 121 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGE 121 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTS
T ss_pred CCCCEEEECCCCCCCCChhh
Confidence 4567777777776666654
No 268
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=35.26 E-value=14 Score=36.83 Aligned_cols=30 Identities=23% Similarity=0.297 Sum_probs=26.9
Q ss_pred CCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 283 GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 283 ~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+...|+.++++++.+-||++||.|++|.++
T Consensus 75 dp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 75 NPDYGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 345789999999999999999999999885
No 269
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=34.45 E-value=14 Score=36.67 Aligned_cols=31 Identities=13% Similarity=0.119 Sum_probs=27.6
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
.+...|+.++++++.+-||++|+.|++|.++
T Consensus 67 idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 97 (471)
T 1jae_A 67 INTRSGDESAFTDMTRRCNDAGVRIYVDAVI 97 (471)
T ss_dssp SEETTEEHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4445799999999999999999999999884
No 270
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=34.09 E-value=1.2e+02 Score=27.28 Aligned_cols=64 Identities=16% Similarity=0.157 Sum_probs=36.3
Q ss_pred HHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEE
Q 013675 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH 307 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lh 307 (438)
+.++++..|.++.....+.+..-..+.++.+++.+...|++..... +.+.+..+.+++.|++++
T Consensus 24 i~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~-----~~~~~~~~~~~~~~iPvV 87 (313)
T 3m9w_A 24 FVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNG-----QVLSNVVKEAKQEGIKVL 87 (313)
T ss_dssp HHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSST-----TSCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh-----hhhHHHHHHHHHCCCeEE
Confidence 3455666688777766543322234555666666676666654322 123455566667788754
No 271
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=33.97 E-value=15 Score=36.56 Aligned_cols=31 Identities=23% Similarity=0.192 Sum_probs=27.1
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|+.++++++.+-||++|+.|++|.++
T Consensus 89 idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 119 (475)
T 2z1k_A 89 VDPILGGNEALRHLLEVAHAHGVRVILDGVF 119 (475)
T ss_dssp ECGGGTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3445788999999999999999999999875
No 272
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=33.94 E-value=15 Score=36.55 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=27.9
Q ss_pred cCCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 281 APGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 281 ~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
.++...|+.++++++.+-||++||.|++|.++
T Consensus 89 ~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (484)
T 2aaa_A 89 DVNSNFGTADNLKSLSDALHARGMYLMVDVVP 120 (484)
T ss_dssp EECTTTCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 34455799999999999999999999999885
No 273
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=32.94 E-value=18 Score=37.19 Aligned_cols=32 Identities=13% Similarity=0.131 Sum_probs=27.8
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEecccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~g 313 (438)
++...|+.++++++.+-||++||.|++|.++.
T Consensus 215 idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 246 (588)
T 1j0h_A 215 VDPHFGDKETLKTLIDRCHEKGIRVMLDAVFN 246 (588)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 34457899999999999999999999999863
No 274
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=32.60 E-value=18 Score=36.82 Aligned_cols=30 Identities=20% Similarity=0.197 Sum_probs=26.8
Q ss_pred CCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 283 GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 283 ~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+...|+.++++++.+-||++|+.|++|.++
T Consensus 73 dp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 102 (557)
T 1zja_A 73 MKEYGTMEDFDRLMAELKKRGMRLMVDVVI 102 (557)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 445799999999999999999999999885
No 275
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=32.55 E-value=39 Score=31.90 Aligned_cols=52 Identities=13% Similarity=0.149 Sum_probs=35.2
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCC
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD 256 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~ 256 (438)
+..++|..+.-+|..+.+ .|++ -.|++|...-..-.+.++.+|.+++.++.+
T Consensus 82 v~aSsGN~g~alA~aa~~------~G~~-~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 82 IESTSGNTGIALCQAGAV------FGYR-VNIAMPSTMSVERQMIMKAFGAELILTEGK 133 (343)
T ss_dssp EEECSSHHHHHHHHHHHH------HTCC-EEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEECCcHHHHHHHHHHHH------cCCC-EEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 445667777766665543 3432 367888776555677888899999988753
No 276
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=32.49 E-value=26 Score=30.72 Aligned_cols=82 Identities=9% Similarity=-0.055 Sum_probs=46.6
Q ss_pred CeEEecCCCcCcHHHHHhhcCcEEEEeeCCCC--CccCHHHHHHhhccCcEEEEEecCC--CCCc----cccCHHHHHHH
Q 013675 227 PEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKE--FRADVKAIKKYINRNTVLIVGSAPG--FPHG----IIDPIQELGEL 298 (438)
Q Consensus 227 ~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~~~--~~~d~~~Le~~I~~~t~~vv~~~~~--~~tG----~iddi~~I~~l 298 (438)
+-+.+....-.....+++. .+.+..-|-+.. ..+|...++.+.+.++.+=+-..+- .+.| .+.+...+.++
T Consensus 77 di~~v~~~~~~~n~~a~~~-~vDII~Hp~~~~~~~~~~~~~a~~A~e~gv~lEIn~s~~~~~~~~~R~~~~~~~~~il~l 155 (212)
T 1v77_A 77 YLIYVESNDLRVIRYSIEK-GVDAIISPWVNRKDPGIDHVLAKLMVKKNVALGFSLRPLLYSNPYERANLLRFMMKAWKL 155 (212)
T ss_dssp SEEEEECSCHHHHHHHHHT-TCSEEECTTTTSSSCSCCHHHHHHHHHHTCEEEEESHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHhC-CCCEEecccccccCCCCCHHHHHHHHHCCeEEEEECcHHhcCCcchHHHHHHHHHHHHHH
Confidence 3344443333445667777 788877776542 3334444455555555433222221 1222 25677789999
Q ss_pred HHHcCCeEEEe
Q 013675 299 ALSHGTCLHVD 309 (438)
Q Consensus 299 a~~~~i~lhVD 309 (438)
|++||+++++.
T Consensus 156 ~k~~g~~ivis 166 (212)
T 1v77_A 156 VEKYKVRRFLT 166 (212)
T ss_dssp HHHHTCCEEEE
T ss_pred HHhcCCCEEEe
Confidence 99999888765
No 277
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=32.43 E-value=20 Score=36.78 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=28.2
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEecccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~g 313 (438)
++...|+.++++++.+-||++||.|+.|.++.
T Consensus 211 idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 242 (583)
T 1ea9_C 211 IDPQFGDKDTLKKLVDLCHERGIRVLLDAVFN 242 (583)
T ss_dssp CCTTTCCHHHHHHHHHHHTTTTCEEEEECCCS
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEccc
Confidence 45567889999999999999999999999864
No 278
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=31.19 E-value=16 Score=36.44 Aligned_cols=31 Identities=16% Similarity=0.023 Sum_probs=27.0
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|+.++++++.+-||++|+.|++|.++
T Consensus 95 idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 125 (488)
T 2wc7_A 95 VDPMLGGNEAFKELLDAAHQRNIKVVLDGVF 125 (488)
T ss_dssp ECGGGTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3445788999999999999999999999875
No 279
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=30.79 E-value=33 Score=27.76 Aligned_cols=41 Identities=15% Similarity=0.064 Sum_probs=29.0
Q ss_pred HHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEecccc
Q 013675 266 IKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 266 Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~g 313 (438)
+++++....+.+++..+.. -+++.++|+++|+.++-+.|.|
T Consensus 87 ~~~~~~~gi~~i~~~~g~~-------~~~~~~~a~~~Gir~vgpnc~g 127 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQSGIR-------HPEFEKALKEAGIPVVADRCLM 127 (140)
T ss_dssp HHHHHHHCCSCEEECTTCC-------CHHHHHHHHHTTCCEEESCCHH
T ss_pred HHHHHHcCCCEEEEcCCcC-------HHHHHHHHHHcCCEEEcCCccc
Confidence 4444444555566554332 3899999999999999999975
No 280
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=30.63 E-value=18 Score=37.03 Aligned_cols=30 Identities=13% Similarity=0.131 Sum_probs=26.6
Q ss_pred CCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 283 GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 283 ~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+...|+.++++++.+-||++||.|++|.+.
T Consensus 86 dp~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 115 (570)
T 1m53_A 86 MKEYGTMEDFDSLVAEMKKRNMRLMIDVVI 115 (570)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 345789999999999999999999999885
No 281
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=30.16 E-value=19 Score=36.92 Aligned_cols=31 Identities=16% Similarity=0.152 Sum_probs=27.3
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|+.++++++.+-||++||.|++|.++
T Consensus 212 id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~ 242 (585)
T 1wzl_A 212 IDPQFGDLPTFRRLVDEAHRRGIKIILDAVF 242 (585)
T ss_dssp ECTTTCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 4445788999999999999999999999885
No 282
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=30.12 E-value=23 Score=37.05 Aligned_cols=31 Identities=19% Similarity=0.147 Sum_probs=27.6
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|..++++++.+-||++||.|++|.++
T Consensus 108 idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 138 (686)
T 1d3c_A 108 TNPAYGTIADFQNLIAAAHAKNIKVIIDFAP 138 (686)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEeCc
Confidence 3455799999999999999999999999885
No 283
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=29.82 E-value=24 Score=36.98 Aligned_cols=30 Identities=20% Similarity=0.092 Sum_probs=27.2
Q ss_pred CCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 283 GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 283 ~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+...|+.++++++.+-||++||.|++|.+.
T Consensus 101 dp~~Gt~~df~~Lv~~aH~~GikVilD~V~ 130 (686)
T 1qho_A 101 EEHFGNWTTFDTLVNDAHQNGIKVIVDFVP 130 (686)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 445799999999999999999999999885
No 284
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=29.63 E-value=1.4e+02 Score=26.57 Aligned_cols=83 Identities=16% Similarity=0.170 Sum_probs=46.0
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhcc-----
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR----- 272 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~----- 272 (438)
++..||+.++-.++.-... +.| -+|++.........+.++..|.++..+.+|-. |.++++++++.
T Consensus 30 vlVTGas~gIG~aia~~la----~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~ 99 (266)
T 3grp_A 30 ALVTGATGGIGEAIARCFH----AQG---AIVGLHGTREDKLKEIAADLGKDVFVFSANLS---DRKSIKQLAEVAEREM 99 (266)
T ss_dssp EEESSTTSHHHHHHHHHHH----HTT---CEEEEEESCHHHHHHHHHHHCSSEEEEECCTT---SHHHHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHH----HCC---CEEEEEeCCHHHHHHHHHHhCCceEEEEeecC---CHHHHHHHHHHHHHHc
Confidence 5666677666555433221 256 56766554444455566666777777777632 55666665542
Q ss_pred -CcEEEEEecCCCCCcccc
Q 013675 273 -NTVLIVGSAPGFPHGIID 290 (438)
Q Consensus 273 -~t~~vv~~~~~~~tG~id 290 (438)
+...++-+++....+.+.
T Consensus 100 g~iD~lvnnAg~~~~~~~~ 118 (266)
T 3grp_A 100 EGIDILVNNAGITRDGLFV 118 (266)
T ss_dssp TSCCEEEECCCCC-----C
T ss_pred CCCCEEEECCCCCCCCCcc
Confidence 456777777766555443
No 285
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=29.50 E-value=26 Score=36.10 Aligned_cols=30 Identities=10% Similarity=0.020 Sum_probs=26.9
Q ss_pred CCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 283 GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 283 ~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+...|..++++++.+-||++|+.|++|.+.
T Consensus 202 dp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 231 (599)
T 3bc9_A 202 RTKYGTKGELENAIDALHNNDIKVYFDAVL 231 (599)
T ss_dssp SBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 445799999999999999999999999885
No 286
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=29.47 E-value=1.1e+02 Score=27.28 Aligned_cols=68 Identities=12% Similarity=0.016 Sum_probs=41.2
Q ss_pred HHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEE-Eecc
Q 013675 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH-VDLC 311 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lh-VD~a 311 (438)
+.++++..|.++.....+.+..-..+.++..+..+...|++..... +.+.+..+.+++.+++++ +|..
T Consensus 30 i~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~-----~~~~~~~~~~~~~~iPvV~~~~~ 98 (293)
T 3l6u_A 30 FKAEAKANKYEALVATSQNSRISEREQILEFVHLKVDAIFITTLDD-----VYIGSAIEEAKKAGIPVFAIDRM 98 (293)
T ss_dssp HHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCT-----TTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCh-----HHHHHHHHHHHHcCCCEEEecCC
Confidence 4456666788888877654333334566666677777777654321 234455666777788854 4433
No 287
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=29.43 E-value=16 Score=35.68 Aligned_cols=29 Identities=21% Similarity=0.132 Sum_probs=26.1
Q ss_pred CCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 284 FPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 284 ~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
...|..++++++.+-||++|+.|++|.+.
T Consensus 69 ~~~G~~~d~~~lv~~~h~~Gi~VilD~V~ 97 (422)
T 1ua7_A 69 RYLGTEQEFKEMCAAAEEYGIKVIVDAVI 97 (422)
T ss_dssp TTTEEHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 34699999999999999999999999885
No 288
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=29.30 E-value=26 Score=36.37 Aligned_cols=31 Identities=19% Similarity=0.183 Sum_probs=27.3
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|+.++++++.+-||++||.|++|.+.
T Consensus 155 vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~V~ 185 (628)
T 1g5a_A 155 VNPALGTIGDLREVIAALHEAGISAVVDFIF 185 (628)
T ss_dssp BCTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4455789999999999999999999999885
No 289
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=29.12 E-value=19 Score=36.59 Aligned_cols=30 Identities=20% Similarity=0.149 Sum_probs=26.8
Q ss_pred CCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 283 GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 283 ~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+...|+.++++++.+-||++|+.|++|.+.
T Consensus 72 d~~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 101 (558)
T 1uok_A 72 MNEFGTMEDWDELLHEMHERNMKLMMDLVV 101 (558)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 345799999999999999999999999885
No 290
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=29.12 E-value=23 Score=37.07 Aligned_cols=30 Identities=20% Similarity=0.231 Sum_probs=27.0
Q ss_pred CCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 283 GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 283 ~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+...|..++++++.+-||++||.|++|.+.
T Consensus 105 dp~~Gt~~df~~Lv~~aH~~GIkVilD~V~ 134 (680)
T 1cyg_A 105 NPFFGTLSDFQRLVDAAHAKGIKVIIDFAP 134 (680)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 345799999999999999999999999885
No 291
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=28.92 E-value=23 Score=36.50 Aligned_cols=30 Identities=23% Similarity=0.161 Sum_probs=26.7
Q ss_pred CCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 283 GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 283 ~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+...|..++++++.+-||++|+.|++|.++
T Consensus 192 dp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 221 (601)
T 3edf_A 192 DPRYGSNEDFVRLSTEARKRGMGLIQDVVL 221 (601)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEEECC
Confidence 344789999999999999999999999885
No 292
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=28.52 E-value=26 Score=36.68 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=27.4
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|..++++++.+-||++||.|++|.++
T Consensus 109 idp~~Gt~~dfk~Lv~~aH~~GikVilD~V~ 139 (683)
T 3bmv_A 109 TNPYFGSFTDFQNLINTAHAHNIKVIIDFAP 139 (683)
T ss_dssp ECTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3445799999999999999999999999885
No 293
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=28.45 E-value=76 Score=29.62 Aligned_cols=52 Identities=12% Similarity=0.204 Sum_probs=35.8
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCC
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD 256 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~ 256 (438)
+..++|..+.-+|..+.+ .|++ -.|++|...-..-.+.++.+|.+++.++.+
T Consensus 77 v~aSsGN~g~alA~aa~~------~G~~-~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 128 (325)
T 3dwg_A 77 LEPTSGNTGISLAMAARL------KGYR-LICVMPENTSVERRQLLELYGAQIIFSAAE 128 (325)
T ss_dssp EEECSSHHHHHHHHHHHH------HTCE-EEEEEESSSCHHHHHHHHHHTCEEEEECST
T ss_pred EEeCCcHHHHHHHHHHHH------cCCc-EEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 445667777666666644 3532 357788876666677888999999999854
No 294
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=28.34 E-value=2.3e+02 Score=24.13 Aligned_cols=63 Identities=14% Similarity=0.144 Sum_probs=31.4
Q ss_pred EecCCCcCcHHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCe
Q 013675 230 IIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTC 305 (438)
Q Consensus 230 iv~~~~h~s~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~ 305 (438)
+.....-......+..+|+++.....+....+ .+.++++..+...+|++... ..++|+++|+.
T Consensus 100 vg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~-~~~i~~l~~~G~~vvVG~~~------------~~~~A~~~Gl~ 162 (196)
T 2q5c_A 100 IAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEI-TTLISKVKTENIKIVVSGKT------------VTDEAIKQGLY 162 (196)
T ss_dssp EEESSCSSCHHHHHHHHTCEEEEEEECSGGGH-HHHHHHHHHTTCCEEEECHH------------HHHHHHHTTCE
T ss_pred EeCcchhhHHHHHHHHhCCceEEEEeCCHHHH-HHHHHHHHHCCCeEEECCHH------------HHHHHHHcCCc
Confidence 33444445566667777777666655421111 12333333344555554321 25667777765
No 295
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=28.16 E-value=21 Score=37.16 Aligned_cols=31 Identities=10% Similarity=-0.137 Sum_probs=27.6
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|+.++++++.+-||++||.|+.|.++
T Consensus 278 idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~ 308 (645)
T 4aef_A 278 VARRLGGDRAFVDLLSELKRFDIKVILDGVF 308 (645)
T ss_dssp ECGGGTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCcccCCHHHHHHHHHHhhhcCCEEEEEecc
Confidence 4456799999999999999999999999885
No 296
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=27.78 E-value=24 Score=36.17 Aligned_cols=30 Identities=20% Similarity=0.047 Sum_probs=26.8
Q ss_pred CCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 283 GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 283 ~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+...|+.++++++.+-||++||.|++|.+.
T Consensus 81 d~~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 110 (589)
T 3aj7_A 81 WPTYGTNEDCFALIEKTHKLGMKFITDLVI 110 (589)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 345789999999999999999999999885
No 297
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=27.62 E-value=20 Score=36.46 Aligned_cols=30 Identities=20% Similarity=0.182 Sum_probs=26.3
Q ss_pred CCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 283 GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 283 ~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+...|+.++++++.+-||++||.|++|.+.
T Consensus 72 dp~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 101 (543)
T 2zic_A 72 ADIFGNMADMDNLLTQAKMRGIKIIMDLVV 101 (543)
T ss_dssp CGGGCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 345788999999999999999999999885
No 298
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=27.62 E-value=18 Score=38.16 Aligned_cols=27 Identities=11% Similarity=0.188 Sum_probs=24.2
Q ss_pred CccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 286 HGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 286 tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+|..++++++.+-||++||.|+.|.++
T Consensus 312 ~~~~~dfk~LV~~aH~~GI~VIlDvV~ 338 (718)
T 2e8y_A 312 QTRKTELKQMINTLHQHGLRVILDVVF 338 (718)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cccHHHHHHHHHHHHHCCCEEEEEEec
Confidence 346799999999999999999999886
No 299
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=27.30 E-value=22 Score=36.68 Aligned_cols=32 Identities=25% Similarity=0.297 Sum_probs=27.8
Q ss_pred cCCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 281 APGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 281 ~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
.++...|..++++++.+-||++||.|+.|.++
T Consensus 184 ~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~ 215 (602)
T 2bhu_A 184 APYAPYGRPEDLMALVDAAHRLGLGVFLDVVY 215 (602)
T ss_dssp EECGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCcCCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 34555789999999999999999999999875
No 300
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=27.27 E-value=25 Score=36.53 Aligned_cols=30 Identities=23% Similarity=0.199 Sum_probs=26.6
Q ss_pred CCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 283 GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 283 ~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+...|+.++++++++-||++||.|++|.+.
T Consensus 149 dp~~Gt~~df~~Lv~~aH~~GI~VilD~V~ 178 (644)
T 3czg_A 149 EPSLGSNDDLVALTSRLREAGISLCADFVL 178 (644)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 445788999999999999999999999885
No 301
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=27.17 E-value=24 Score=35.92 Aligned_cols=30 Identities=27% Similarity=0.265 Sum_probs=26.4
Q ss_pred CCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 283 GFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 283 ~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+...|+.++++++.+.||++|+.|++|.+.
T Consensus 72 d~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 101 (555)
T 2ze0_A 72 MDEFGTMDDFDELLAQAHRRGLKVILDLVI 101 (555)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 445788999999999999999999999875
No 302
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=26.69 E-value=3.6e+02 Score=24.42 Aligned_cols=70 Identities=17% Similarity=0.333 Sum_probs=43.1
Q ss_pred CeEEecCCCcCcHHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhc---c-CcEEEEEecCCCCCccccCHHHHHHHHHHc
Q 013675 227 PEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYIN---R-NTVLIVGSAPGFPHGIIDPIQELGELALSH 302 (438)
Q Consensus 227 ~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~---~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~ 302 (438)
..+++ .|.+|.-.++.+|++...+... +....+.+|.+.++ + +..+|+.. ++.+.- .+..|+++.
T Consensus 191 ~~~v~---~H~af~Yf~~~yGl~~~~~~~~-~~eps~~~l~~l~~~ik~~~v~~If~e-~~~~~~------~~~~ia~~~ 259 (291)
T 1pq4_A 191 RKFIV---FHPSWAYFARDYNLVQIPIEVE-GQEPSAQELKQLIDTAKENNLTMVFGE-TQFSTK------SSEAIAAEI 259 (291)
T ss_dssp CEEEE---SSCCCHHHHHHTTCEEEESCBT-TBCCCHHHHHHHHHHHHTTTCCEEEEE-TTSCCH------HHHHHHHHH
T ss_pred CEEEE---ECCchHHHHHHCCCEEeecccC-CCCCCHHHHHHHHHHHHHcCCCEEEEe-CCCChH------HHHHHHHHc
Confidence 45555 4778888899999998766432 34566666666654 3 45666554 333221 223467888
Q ss_pred CCeEE
Q 013675 303 GTCLH 307 (438)
Q Consensus 303 ~i~lh 307 (438)
|+.+.
T Consensus 260 g~~v~ 264 (291)
T 1pq4_A 260 GAGVE 264 (291)
T ss_dssp TCEEE
T ss_pred CCeEE
Confidence 88754
No 303
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=26.50 E-value=72 Score=25.79 Aligned_cols=44 Identities=11% Similarity=0.140 Sum_probs=31.0
Q ss_pred HHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEecccc
Q 013675 263 VKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 263 ~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~g 313 (438)
.+.+++++....+.+++..+ .. -+++.++|+++|+.++-+.|.|
T Consensus 91 ~~vv~~~~~~gi~~i~~~~g-----~~--~~~l~~~a~~~Gi~vvGpnc~g 134 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWFQYN-----TY--NREASKKADEAGLIIVANRCMM 134 (144)
T ss_dssp HHHHHHHHHHTCSEEEECTT-----CC--CHHHHHHHHHTTCEEEESCCHH
T ss_pred HHHHHHHHHcCCCEEEECCC-----ch--HHHHHHHHHHcCCEEEcCCchh
Confidence 44455555556666665432 22 5899999999999998898875
No 304
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=26.46 E-value=1.1e+02 Score=26.89 Aligned_cols=8 Identities=0% Similarity=-0.134 Sum_probs=3.6
Q ss_pred ceeEcCCh
Q 013675 196 CGNMTSGG 203 (438)
Q Consensus 196 ~g~~t~gg 203 (438)
.|+++++-
T Consensus 10 Igvi~~~~ 17 (276)
T 3jy6_A 10 IAVIVANI 17 (276)
T ss_dssp EEEEESCT
T ss_pred EEEEeCCC
Confidence 34444443
No 305
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=26.37 E-value=1.3e+02 Score=26.45 Aligned_cols=82 Identities=17% Similarity=0.201 Sum_probs=48.5
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhcc-----
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR----- 272 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~----- 272 (438)
++..||+.++-.++.-... ..| -+|++.........+.+..+|.++..+.+|- -|.+++++.++.
T Consensus 9 vlVTGas~gIG~a~a~~l~----~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 9 ALVTGAAQGIGKAIAARLA----ADG---ATVIVSDINAEGAKAAAASIGKKARAIAADI---SDPGSVKALFAEIQALT 78 (247)
T ss_dssp EEEETTTSHHHHHHHHHHH----HTT---CEEEEECSCHHHHHHHHHHHCTTEEECCCCT---TCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHH----HCC---CEEEEEeCCHHHHHHHHHHhCCceEEEEcCC---CCHHHHHHHHHHHHHHC
Confidence 5556666666554433221 256 5777765554555666666677777777763 255666665542
Q ss_pred -CcEEEEEecCCCCCccc
Q 013675 273 -NTVLIVGSAPGFPHGII 289 (438)
Q Consensus 273 -~t~~vv~~~~~~~tG~i 289 (438)
+...++-+++..+.+.+
T Consensus 79 g~id~lv~nAg~~~~~~~ 96 (247)
T 3rwb_A 79 GGIDILVNNASIVPFVAW 96 (247)
T ss_dssp SCCSEEEECCCCCCCCCG
T ss_pred CCCCEEEECCCCCCCCCc
Confidence 45677777776655544
No 306
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=26.11 E-value=24 Score=36.53 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=28.0
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEecccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~g 313 (438)
++...|+.++++++.+-||++||.|+.|.++.
T Consensus 197 ~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~N 228 (617)
T 1m7x_A 197 PTRRFGTRDDFRYFIDAAHAAGLNVILDWVPG 228 (617)
T ss_dssp ECGGGSCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 44557899999999999999999999998863
No 307
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=26.00 E-value=2.9e+02 Score=24.86 Aligned_cols=65 Identities=20% Similarity=0.122 Sum_probs=42.4
Q ss_pred HHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEE
Q 013675 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHV 308 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhV 308 (438)
+.+.+..+|++++....... -++....+.+.+++.++++..-+ .....++.+..++.+.+++++.
T Consensus 161 ~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~l~~~~d~i~~~~d~---~~~~~~~~i~~~~~~~~iPv~~ 225 (302)
T 3lkv_A 161 LKLSAAKHGIKLVEATALKS--ADVQSATQAIAEKSDVIYALIDN---TVASAIEGMIVAANQAKTPVFG 225 (302)
T ss_dssp HHHHHHHTTCEEEEEECSSG--GGHHHHHHHHHTTCSEEEECSCH---HHHHTHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHcCCEEEEEecCCh--HHHHHHHHhccCCeeEEEEeCCc---chhhHHHHHHHHHhhcCCceee
Confidence 45667777999988876532 23444444455666666654432 2344678889999999999763
No 308
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=25.93 E-value=35 Score=35.89 Aligned_cols=32 Identities=19% Similarity=0.170 Sum_probs=27.1
Q ss_pred cCCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 281 APGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 281 ~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
.++...|..++++++.+-||++|+.|++|.++
T Consensus 312 ~idp~~Gt~edfk~LV~~aH~~GI~VilD~V~ 343 (695)
T 3zss_A 312 SIHPALGTLDDFDHFVTEAGKLGLEIALDFAL 343 (695)
T ss_dssp SCCTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEeec
Confidence 34445677888999999999999999999885
No 309
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=25.58 E-value=3e+02 Score=24.21 Aligned_cols=77 Identities=9% Similarity=0.101 Sum_probs=50.9
Q ss_pred eEEec-CCCcCc-HHHHHhhcCcEEEEeeCC--------CCCccCHHHHHHhhcc-CcEEEEEecCCCCCccccCHHHHH
Q 013675 228 EMIIP-VSAHSA-YDKAAQYFNIKLWRVPVD--------KEFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDPIQELG 296 (438)
Q Consensus 228 ~Viv~-~~~h~s-~~~a~~~~Gi~v~~v~~~--------~~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~iddi~~I~ 296 (438)
.++.+ ++.+.. +.+..+.++..+..+|+. ..+.+++++..++++. +++.++.+|-.+-.-.-.+.+++.
T Consensus 162 ~i~~~GDt~~~~~~~~~~~~~~~Dv~il~~g~~~~~~~~~~~hm~~~ea~~~~~~l~~~~vi~~H~~~~~~~~~~~~~l~ 241 (264)
T 3rpc_A 162 TVYLVGDTVWTSDVEKALLRFDPNVIIMNTGYAQILGFEDSIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDVR 241 (264)
T ss_dssp CEEECCSCCSCHHHHHHHHHHCCSEEEEECSCBCBTTCSSCSSCCHHHHHHHHHHCTTSEEEEESCSSSTTBCSCHHHHH
T ss_pred EEEEECCcCchHHHHHHHHHhCCCEEEEecCccccccccCCcccCHHHHHHHHHhCCcCeEEEEccccccccccCHHHHH
Confidence 45544 444433 455566678888888876 3567888877776643 567788888764222335788999
Q ss_pred HHHHHcCC
Q 013675 297 ELALSHGT 304 (438)
Q Consensus 297 ~la~~~~i 304 (438)
+.+++.++
T Consensus 242 ~~~~~~g~ 249 (264)
T 3rpc_A 242 KFIKGNNI 249 (264)
T ss_dssp HHHHHTTC
T ss_pred HHHHHcCC
Confidence 99888775
No 310
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=25.56 E-value=1.5e+02 Score=26.60 Aligned_cols=82 Identities=20% Similarity=0.207 Sum_probs=47.7
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhcc-----
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR----- 272 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~----- 272 (438)
++.+||+.++-.++.-... +.| -+|++.........+.+...+.++..+++|- -|.++++++++.
T Consensus 30 vlVTGas~GIG~aia~~l~----~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 30 CIVTGGGSGIGRATAELFA----KNG---AYVVVADVNEDAAVRVANEIGSKAFGVRVDV---SSAKDAESMVEKTTAKW 99 (277)
T ss_dssp EEEETTTSHHHHHHHHHHH----HTT---CEEEEEESSHHHHHHHHHHHCTTEEEEECCT---TCHHHHHHHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHH----HCC---CEEEEEeCCHHHHHHHHHHhCCceEEEEecC---CCHHHHHHHHHHHHHHc
Confidence 5666666666555433221 256 5676655444445555555676777777663 255666665542
Q ss_pred -CcEEEEEecCCCCCccc
Q 013675 273 -NTVLIVGSAPGFPHGII 289 (438)
Q Consensus 273 -~t~~vv~~~~~~~tG~i 289 (438)
+...++-+++....+.+
T Consensus 100 g~iD~lv~nAg~~~~~~~ 117 (277)
T 4dqx_A 100 GRVDVLVNNAGFGTTGNV 117 (277)
T ss_dssp SCCCEEEECCCCCCCBCT
T ss_pred CCCCEEEECCCcCCCCCc
Confidence 45677777776655544
No 311
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=25.40 E-value=23 Score=36.07 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=28.4
Q ss_pred cCCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 281 APGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 281 ~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+++...|..++++++.+-||++|+.|++|.++
T Consensus 159 ~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 190 (558)
T 3vgf_A 159 AVQNSYGGPEGFRKLVDEAHKKGLGVILDVVY 190 (558)
T ss_dssp EECGGGTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccccccCCHHHHHHHHHHHHHcCCEEEEEEee
Confidence 34566899999999999999999999999885
No 312
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=25.17 E-value=43 Score=24.65 Aligned_cols=22 Identities=18% Similarity=0.019 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCeEEEecccc
Q 013675 292 IQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 292 i~~I~~la~~~~i~lhVD~a~g 313 (438)
-.+|.++|+++|++++-|-..+
T Consensus 29 A~~I~~~A~e~~VPi~e~~~LA 50 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIPLA 50 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 4799999999999999997654
No 313
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=25.14 E-value=54 Score=30.35 Aligned_cols=52 Identities=17% Similarity=0.205 Sum_probs=35.0
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCC
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD 256 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~ 256 (438)
+..++|..+.-+|..+.+ .|++ -.|++|...-..-.+.++.+|.+++.++.+
T Consensus 71 v~assGN~g~alA~~a~~------~G~~-~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 122 (313)
T 2q3b_A 71 LEPTSGNTGIALAMVCAA------RGYR-CVLTMPETMSLERRMLLRAYGAELILTPGA 122 (313)
T ss_dssp EEECSSHHHHHHHHHHHH------HTCE-EEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEeCCCHHHHHHHHHHHH------cCCc-EEEEECCCCCHHHHHHHHHCCCEEEEeCCC
Confidence 445666666666665543 3421 367788776555677888899999998753
No 314
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=25.08 E-value=29 Score=35.86 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=28.7
Q ss_pred cCCCCCccccCHHHHHHHHHHcCCeEEEecccc
Q 013675 281 APGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 281 ~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~g 313 (438)
.++...|..++++++.+-||++||.|++|.++.
T Consensus 194 ~~~~~~G~~~~~~~lv~~~H~~Gi~VilD~V~N 226 (618)
T 3m07_A 194 APHSAYGTPDDFKAFIDAAHGYGLSVVLDIVLN 226 (618)
T ss_dssp EECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCcCcCCHHHHHHHHHHHHHCCCEEEEeecCc
Confidence 345668999999999999999999999998863
No 315
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=25.08 E-value=25 Score=36.88 Aligned_cols=31 Identities=13% Similarity=0.168 Sum_probs=27.2
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|+.++++++.+-||++||.|++|.++
T Consensus 304 idp~~Gt~~df~~Lv~~aH~~GikVilD~V~ 334 (696)
T 4aee_A 304 IDKYLGTMEDFEKLVQVLHSRKIKIVLDITM 334 (696)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 3445788999999999999999999999885
No 316
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=24.87 E-value=3.2e+02 Score=24.60 Aligned_cols=71 Identities=13% Similarity=0.208 Sum_probs=42.1
Q ss_pred CeEEecCCCcCcHHHHHhhcCcEEEEee-CCCCCccCHHHHHHhhc---c-CcEEEEEecCCCCCccccCHHHHHHHHHH
Q 013675 227 PEMIIPVSAHSAYDKAAQYFNIKLWRVP-VDKEFRADVKAIKKYIN---R-NTVLIVGSAPGFPHGIIDPIQELGELALS 301 (438)
Q Consensus 227 ~~Viv~~~~h~s~~~a~~~~Gi~v~~v~-~~~~~~~d~~~Le~~I~---~-~t~~vv~~~~~~~tG~iddi~~I~~la~~ 301 (438)
..+++ .|.+|.-.++.+|++...+. +.++....+.+|.+.++ + +..+|+.. ++.+. +.+..++++
T Consensus 175 ~~~v~---~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e-~~~~~------~~~~~ia~~ 244 (284)
T 2prs_A 175 KGYFV---FHDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAE-PQFRP------AVVESVARG 244 (284)
T ss_dssp CCEEE---EESCCHHHHHHHTCCCCEEEESSTTSCCCHHHHHHHHHHHHHTTCCEEEEC-TTSCS------HHHHHHTTT
T ss_pred CeEEE---ECccHHHHHHHCCCeEeEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEe-CCCCh------HHHHHHHHH
Confidence 44555 58888888999999765443 33445566666666553 3 45555443 43322 233445777
Q ss_pred cCCeEE
Q 013675 302 HGTCLH 307 (438)
Q Consensus 302 ~~i~lh 307 (438)
.|+.+.
T Consensus 245 ~g~~v~ 250 (284)
T 2prs_A 245 TSVRMG 250 (284)
T ss_dssp SCCEEE
T ss_pred cCCeEE
Confidence 787764
No 317
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=24.73 E-value=66 Score=30.46 Aligned_cols=17 Identities=12% Similarity=0.034 Sum_probs=12.4
Q ss_pred HHHhhcCcEEEEeeCCC
Q 013675 241 KAAQYFNIKLWRVPVDK 257 (438)
Q Consensus 241 ~a~~~~Gi~v~~v~~~~ 257 (438)
+.++..|++++++|+.+
T Consensus 61 ~~lk~~G~N~VRip~~~ 77 (345)
T 3jug_A 61 PAIAEQGANTIRIVLSD 77 (345)
T ss_dssp HHHHHTTCSEEEEEECC
T ss_pred HHHHHcCCCEEEEEecC
Confidence 34556799999998764
No 318
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=24.62 E-value=1.2e+02 Score=26.75 Aligned_cols=63 Identities=11% Similarity=0.070 Sum_probs=30.8
Q ss_pred HHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEE
Q 013675 240 DKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH 307 (438)
Q Consensus 240 ~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lh 307 (438)
.++++..|.++.....+.+..-..+.++..+..+...|++...+. .......+.+++.|++++
T Consensus 28 ~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~-----~~~~~~~~~~~~~~iPvV 90 (291)
T 3l49_A 28 IAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNL-----DVLNPWLQKINDAGIPLF 90 (291)
T ss_dssp HHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCH-----HHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh-----hhhHHHHHHHHHCCCcEE
Confidence 344555577766665443222223445555555666665543311 123344555566676643
No 319
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=24.60 E-value=97 Score=28.46 Aligned_cols=52 Identities=17% Similarity=0.277 Sum_probs=35.3
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCC
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD 256 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~ 256 (438)
+..++|..+.-+|..+.+ .|++ -.|++|...-..-.+.++.+|.+++.++.+
T Consensus 65 v~~ssGN~g~a~A~~a~~------~G~~-~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 116 (303)
T 2v03_A 65 IEATSGNTGIALAMIAAL------KGYR-MKLLMPDNMSQERRAAMRAYGAELILVTKE 116 (303)
T ss_dssp EEECSSHHHHHHHHHHHH------HTCE-EEEEEETTSCHHHHHHHHHTTCEEEEECTT
T ss_pred EEECCcHHHHHHHHHHHH------cCCc-EEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 445667777766665543 3431 357788776566677888999999998853
No 320
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=24.60 E-value=47 Score=30.89 Aligned_cols=57 Identities=14% Similarity=0.058 Sum_probs=31.2
Q ss_pred EeeCCCCCccCHHHHHHhhcc----CcEEE--EEecCCCCCccccCHHHHHHHHHHc---CCeEEE
Q 013675 252 RVPVDKEFRADVKAIKKYINR----NTVLI--VGSAPGFPHGIIDPIQELGELALSH---GTCLHV 308 (438)
Q Consensus 252 ~v~~~~~~~~d~~~Le~~I~~----~t~~v--v~~~~~~~tG~iddi~~I~~la~~~---~i~lhV 308 (438)
.-|.++++.+|.+.+++.++. .+..+ ..+.+.+++=..+.-.++.+.+.+. ++++++
T Consensus 24 vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 24 VTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp CCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred ECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 335567888999998888753 33333 3333333332333344555555442 466665
No 321
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=24.54 E-value=62 Score=31.77 Aligned_cols=52 Identities=19% Similarity=0.170 Sum_probs=36.3
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCC
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD 256 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~ 256 (438)
+..++|..+.-+|..+.+ .|++ -.|++|...-..-.+.++.+|.+++.++.+
T Consensus 179 V~aSsGNhG~AlA~aAa~------~Gl~-~~IvmP~~~s~~k~~~~r~~GAeVv~v~~~ 230 (430)
T 4aec_A 179 VEPTSGNTGIGLAFIAAS------RGYR-LILTMPASMSMERRVLLKAFGAELVLTDPA 230 (430)
T ss_dssp EEECSSHHHHHHHHHHHH------HTCE-EEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEECCCHHHHHHHHHHHH------hCCE-EEEEEcCCCCHHHHHHHHHCCCEEEEECCC
Confidence 445667777777766554 4531 367888876666777889999999988743
No 322
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=24.53 E-value=31 Score=36.34 Aligned_cols=31 Identities=19% Similarity=0.206 Sum_probs=25.8
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
|..+++.+++++++.+-||++||.|+.|.++
T Consensus 247 ~~~~~~~~~efk~lV~~~H~~Gi~VilDvV~ 277 (714)
T 2ya0_A 247 PKNPEKRIAEFKNLINEIHKRGMGAILDVVY 277 (714)
T ss_dssp TTSTTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCccchHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3344455789999999999999999999886
No 323
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=24.52 E-value=1.6e+02 Score=26.13 Aligned_cols=65 Identities=17% Similarity=0.105 Sum_probs=39.0
Q ss_pred HHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEE-Ee
Q 013675 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH-VD 309 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lh-VD 309 (438)
+.++++..|.++...... +..-..+.++..++.+...|++..... +......+.+++.|++++ +|
T Consensus 24 i~~~a~~~g~~~~~~~~~-~~~~~~~~i~~l~~~~vdgiii~~~~~-----~~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 24 ADKAGKDLGFEVIKIAVP-DGEKTLNAIDSLAASGAKGFVICTPDP-----KLGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHHHHTEEEEEEECC-SHHHHHHHHHHHHHTTCCEEEEECSCG-----GGHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHcCCEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEEeCCCc-----hhhHHHHHHHHHCCCcEEEeC
Confidence 345566668888766542 222234456666777777777665422 234555566777899865 55
No 324
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=24.24 E-value=3.4e+02 Score=25.16 Aligned_cols=98 Identities=17% Similarity=0.162 Sum_probs=57.1
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcC--c--HHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccC
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHS--A--YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRN 273 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~--s--~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~ 273 (438)
++|.+.+......++.+.. .|. +-+|++.++.-. . +.+.....|+.+..++- .++-..+.+=
T Consensus 125 ILTh~~S~tv~~~l~~A~~-----~gk-~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~D--------sa~~~~m~~v 190 (315)
T 3ecs_A 125 ILTHAYSRVVLRVLEAAVA-----AKK-RFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLD--------AAVGYIMEKA 190 (315)
T ss_dssp EEECSCCHHHHHHHHHHHT-----TTC-CEEEEEECCTTTTHHHHHHHHHHTTTCCEEEECG--------GGHHHHGGGC
T ss_pred EEEcCCcHHHHHHHHHHHH-----cCC-eEEEEEecCCCcchHHHHHHHHHHcCCCEEEEeh--------hHHHHHHHhC
Confidence 7887777666666655542 331 246777665321 1 22333344888877752 2333334433
Q ss_pred cEEEEEecCCCCCccc-cCH--HHHHHHHHHcCCeEEEe
Q 013675 274 TVLIVGSAPGFPHGII-DPI--QELGELALSHGTCLHVD 309 (438)
Q Consensus 274 t~~vv~~~~~~~tG~i-ddi--~~I~~la~~~~i~lhVD 309 (438)
.+++++...-...|.+ ..+ -.++-+|+.+|+++.|=
T Consensus 191 d~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 191 DLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp SEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred CEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 4566666554555544 444 46888999999999874
No 325
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=23.92 E-value=49 Score=30.79 Aligned_cols=55 Identities=15% Similarity=0.150 Sum_probs=31.9
Q ss_pred eCCCCCccCHHHHHHhhcc----CcE--EEEEecCCCCCccccCHHHHHHHHHHc---CCeEEE
Q 013675 254 PVDKEFRADVKAIKKYINR----NTV--LIVGSAPGFPHGIIDPIQELGELALSH---GTCLHV 308 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~~----~t~--~vv~~~~~~~tG~iddi~~I~~la~~~---~i~lhV 308 (438)
|.++++.+|.+.+++.++. .+. ++..+.+.+++=..+.-.++.+.+.+. ++++++
T Consensus 25 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 25 PFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 4566888999998887752 333 333334433333334445666666654 466665
No 326
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=23.92 E-value=1.4e+02 Score=26.80 Aligned_cols=84 Identities=12% Similarity=0.095 Sum_probs=49.7
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHh---hcCcEEEEeeCCCCCccCHHHHHHhhc---
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQ---YFNIKLWRVPVDKEFRADVKAIKKYIN--- 271 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~---~~Gi~v~~v~~~~~~~~d~~~Le~~I~--- 271 (438)
++.+||+.++-.++.-... +.| -+|++.........+.++ ..|.++..+.+|-+ |.+++++.++
T Consensus 12 alVTGas~GIG~aia~~la----~~G---a~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~---~~~~v~~~~~~~~ 81 (255)
T 4g81_D 12 ALVTGSARGLGFAYAEGLA----AAG---ARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT---DELAIEAAFSKLD 81 (255)
T ss_dssp EEETTCSSHHHHHHHHHHH----HTT---CEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT---CHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHH----HCC---CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC---CHHHHHHHHHHHH
Confidence 5666777777665443221 367 678776654444444433 34778888887743 4555555543
Q ss_pred c---CcEEEEEecCCCCCccccC
Q 013675 272 R---NTVLIVGSAPGFPHGIIDP 291 (438)
Q Consensus 272 ~---~t~~vv~~~~~~~tG~idd 291 (438)
+ +.-.++-+++....+.+.+
T Consensus 82 ~~~G~iDiLVNNAG~~~~~~~~~ 104 (255)
T 4g81_D 82 AEGIHVDILINNAGIQYRKPMVE 104 (255)
T ss_dssp HTTCCCCEEEECCCCCCCCCGGG
T ss_pred HHCCCCcEEEECCCCCCCCChhh
Confidence 2 3557777777766666543
No 327
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=23.91 E-value=1.9e+02 Score=25.68 Aligned_cols=67 Identities=18% Similarity=0.189 Sum_probs=36.2
Q ss_pred HHHHHhhcCcEEEEe-eCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEE-Eec
Q 013675 239 YDKAAQYFNIKLWRV-PVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH-VDL 310 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v-~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lh-VD~ 310 (438)
+.++++..|.++..+ ..+.+..-..+.++.+++.+...|++..... .......+.+++.|++++ +|.
T Consensus 26 i~~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~-----~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 26 FEDAAQALNVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDP-----VELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp HHHHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSST-----TTTHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCH-----HHHHHHHHHHHHCCCcEEEECC
Confidence 344556668888763 3322222233455666666777776654321 123445566667788754 443
No 328
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=23.88 E-value=42 Score=31.31 Aligned_cols=56 Identities=14% Similarity=0.040 Sum_probs=30.3
Q ss_pred eCCCCCccCHHHHHHhhcc----Cc--EEEEEecCCCCCccccCHHHHHHHHHHc---CCeEEEe
Q 013675 254 PVDKEFRADVKAIKKYINR----NT--VLIVGSAPGFPHGIIDPIQELGELALSH---GTCLHVD 309 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~~----~t--~~vv~~~~~~~tG~iddi~~I~~la~~~---~i~lhVD 309 (438)
|.++++.+|.+.+++.++. .+ .++..+.+.+++=..+.-.++.+.+.+. ++++++=
T Consensus 19 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG 83 (309)
T 3fkr_A 19 TFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVT 83 (309)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 4566788888888887752 33 2333444444333334444555555442 3555543
No 329
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=23.88 E-value=58 Score=30.19 Aligned_cols=56 Identities=14% Similarity=0.058 Sum_probs=30.7
Q ss_pred eCCCCCccCHHHHHHhhcc----CcEEE--EEecCCCCCccccCHHHHHHHHHHc---CCeEEEe
Q 013675 254 PVDKEFRADVKAIKKYINR----NTVLI--VGSAPGFPHGIIDPIQELGELALSH---GTCLHVD 309 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~~----~t~~v--v~~~~~~~tG~iddi~~I~~la~~~---~i~lhVD 309 (438)
|.++++.+|.+.+++.++. .+..+ ..+.+.+++=..+.-.++.+.+.+. .+++++=
T Consensus 27 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG 91 (304)
T 3cpr_A 27 PFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAG 91 (304)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEec
Confidence 5566888999998888762 34333 3333333333333344555555442 3666543
No 330
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=23.70 E-value=1.5e+02 Score=25.82 Aligned_cols=12 Identities=17% Similarity=0.033 Sum_probs=5.1
Q ss_pred HhhcCcEEEEee
Q 013675 243 AQYFNIKLWRVP 254 (438)
Q Consensus 243 ~~~~Gi~v~~v~ 254 (438)
++..|.++....
T Consensus 28 a~~~g~~~~~~~ 39 (272)
T 3o74_A 28 ARARGYQLLIAS 39 (272)
T ss_dssp HHHTTCEEEEEE
T ss_pred HHHCCCEEEEEe
Confidence 333344444443
No 331
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=23.42 E-value=48 Score=30.67 Aligned_cols=55 Identities=15% Similarity=0.166 Sum_probs=30.8
Q ss_pred eCCCCCccCHHHHHHhhcc----CcEEEE--EecCCCCCccccCHHHHHHHHHHc---CCeEEE
Q 013675 254 PVDKEFRADVKAIKKYINR----NTVLIV--GSAPGFPHGIIDPIQELGELALSH---GTCLHV 308 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~~----~t~~vv--~~~~~~~tG~iddi~~I~~la~~~---~i~lhV 308 (438)
|.++++.+|.+.+++.++. ....++ .+.+.+++=+.+.-.++.+.+.+. .+++++
T Consensus 18 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 18 PMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 5567889999999888753 343333 333333332333344555555442 466666
No 332
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=23.22 E-value=1.4e+02 Score=27.12 Aligned_cols=63 Identities=17% Similarity=0.227 Sum_probs=33.4
Q ss_pred HHHHhhcCcEEEEe-eCCCCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEE
Q 013675 240 DKAAQYFNIKLWRV-PVDKEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH 307 (438)
Q Consensus 240 ~~a~~~~Gi~v~~v-~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lh 307 (438)
.++++..|.++... +.+.+-.-..+.++.+++.+..++++..... +.+..+.+.+++.|++++
T Consensus 26 ~~~~~~~g~~~~~~~~~~~d~~~q~~~i~~li~~~vdgiii~~~~~-----~~~~~~~~~a~~~gipvV 89 (316)
T 1tjy_A 26 QEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSP-----DGLCPALKRAMQRGVKIL 89 (316)
T ss_dssp HHHHHHHTCEEEECCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSS-----STTHHHHHHHHHTTCEEE
T ss_pred HHHHHHhCCEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCH-----HHHHHHHHHHHHCcCEEE
Confidence 34455567777654 2222222223456666766776666543321 123445566677788754
No 333
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=23.21 E-value=40 Score=36.23 Aligned_cols=29 Identities=17% Similarity=0.063 Sum_probs=26.5
Q ss_pred CCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 284 FPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 284 ~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
...|..++++++.+-||++||.|++|.+.
T Consensus 687 ~~~Gt~~df~~lv~~~H~~GI~VilD~V~ 715 (844)
T 3aie_A 687 NKYGTADDLVKAIKALHSKGIKVMADWVP 715 (844)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 56788899999999999999999999885
No 334
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=23.21 E-value=45 Score=31.16 Aligned_cols=55 Identities=11% Similarity=0.082 Sum_probs=31.0
Q ss_pred eCCCCCccCHHHHHHhhcc----CcEEE--EEecCCCCCccccCHHHHHHHHHHc--CCeEEE
Q 013675 254 PVDKEFRADVKAIKKYINR----NTVLI--VGSAPGFPHGIIDPIQELGELALSH--GTCLHV 308 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~~----~t~~v--v~~~~~~~tG~iddi~~I~~la~~~--~i~lhV 308 (438)
|.++++.+|.+.+++.++. .+..+ ..+.+.+++=+.+.-.++.+.+.+. ++++++
T Consensus 19 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 19 PFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 4566888999999888752 34333 3333333333333444555555544 467666
No 335
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=23.03 E-value=1.4e+02 Score=26.69 Aligned_cols=67 Identities=16% Similarity=0.093 Sum_probs=39.4
Q ss_pred HHHHHhhcCcEEEEeeCC--CCCccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEE-Eec
Q 013675 239 YDKAAQYFNIKLWRVPVD--KEFRADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH-VDL 310 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v~~~--~~~~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lh-VD~ 310 (438)
+.++++..|.++.....+ .+..-..+.++.+++.+...|++..... +.+....+.+++.|++++ +|.
T Consensus 25 i~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~-----~~~~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 25 AKKAAEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSD-----TAFSKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp HHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCS-----STTHHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCH-----HHHHHHHHHHHHCCCCEEEEcC
Confidence 445666678888877643 1222233556666677777777654321 234555666777888865 443
No 336
>1ifk_A Inovirus; helical virus; 5.00A {Enterobacteria phage IF1} SCOP: h.1.4.1 PDB: 1nh4_A 2c0w_A 2c0x_A
Probab=22.91 E-value=1.7e+02 Score=19.20 Aligned_cols=42 Identities=14% Similarity=0.200 Sum_probs=32.1
Q ss_pred hhHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHHH
Q 013675 5 SAKSSLIRFRASANSFLSQYEPVILLLAPLLTLLVARVLQSFLD 48 (438)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 48 (438)
-....++.+..+.++.... .|-++...+...+.++.+++|-+
T Consensus 7 ~A~aA~dsl~~qat~~ig~--~W~vvv~vv~a~~gIKlFKKf~s 48 (51)
T 1ifk_A 7 QAKAAFDSLTAQATEMSGY--AWALVVLVVGATVGIKLFKKFVS 48 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh--hhhhhheeeehhhhhHHHhhhcc
Confidence 3455677777778887776 58888888888888888888765
No 337
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=22.85 E-value=1.5e+02 Score=27.40 Aligned_cols=65 Identities=15% Similarity=0.213 Sum_probs=43.8
Q ss_pred CcCcHHHHHhhcCcEEEEe-eCCCCCccCHHHHHHhhc---c-CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeE
Q 013675 235 AHSAYDKAAQYFNIKLWRV-PVDKEFRADVKAIKKYIN---R-NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCL 306 (438)
Q Consensus 235 ~h~s~~~a~~~~Gi~v~~v-~~~~~~~~d~~~Le~~I~---~-~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~l 306 (438)
.|.+|.-.++.+|++...+ ++.++....+.+|.+.++ + +..+|+.....++ +.+..++++.|+.+
T Consensus 196 ~H~af~Yfa~~yGl~~~~~~~i~~~~ePs~~~l~~l~~~ik~~~v~~If~e~~~~~-------k~~~~ia~e~g~~v 265 (307)
T 3ujp_A 196 CEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSD-------KGQKQVAQATGARF 265 (307)
T ss_dssp EESTTHHHHHHTTCEEEEEESSCCSSCCCHHHHHHHHHHHHTTTCSEEEEETTSCS-------HHHHHTTTTTCCEE
T ss_pred ECchHHHHHHHCCCcEEEeeccCCCCCCCHHHHHHHHHHHHhcCCcEEEEeCCCCh-------HHHHHHHHHhCCce
Confidence 5888999999999997765 345555666666666654 3 5666666543332 45566778888875
No 338
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=22.83 E-value=2.8e+02 Score=21.82 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=28.5
Q ss_pred HHHHHhhc-cCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEE
Q 013675 264 KAIKKYIN-RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHV 308 (438)
Q Consensus 264 ~~Le~~I~-~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhV 308 (438)
+.+..+++ .++.+++++.+ ..|-+++.++|+++|++++.
T Consensus 64 ~~~l~a~~~~~~~~iIlt~g------~~~~~~i~~~A~~~~ipvl~ 103 (139)
T 2ioj_A 64 DLLLTALEMPNVRCLILTGN------LEPVQLVLTKAEERGVPVIL 103 (139)
T ss_dssp HHHHHHTTCTTEEEEEEETT------CCCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHhCCCCcEEEEcCC------CCCCHHHHHHHHHCCCeEEE
Confidence 34445566 67888888765 34667888999999999764
No 339
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=22.81 E-value=3.3e+02 Score=23.47 Aligned_cols=129 Identities=9% Similarity=-0.075 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeEcCChHHHHHHHHHHHHHHHHHh--cCCCCCeEEecC---CCcCc----HHH
Q 013675 171 RFEAEVIAMTAALLGNKEKASGGQVCGNMTSGGTESILLAVKSSRDYMRNK--RGITRPEMIIPV---SAHSA----YDK 241 (438)
Q Consensus 171 ~~e~~~~~~~a~l~g~~~~~~~~~v~g~~t~ggt~a~~~al~a~~~~~~~~--~G~~~~~Viv~~---~~h~s----~~~ 241 (438)
+......+.+.++|+...-. + .-..=+++.+..++..+....... ....+++|++.. ..|-- +..
T Consensus 41 ~~l~p~m~~VG~lw~~g~i~----v--~q~~~aa~~~~~~l~~l~~~l~~~~~~~~~~~~vll~~v~gd~HdiG~~iv~~ 114 (215)
T 3ezx_A 41 KGLSVGMKIVGDKFEAAEIF----L--PQIMMSGKAMSNAMEVLTPELEKNKKEGEEAGLAITFVAEGDIHDIGHRLVTT 114 (215)
T ss_dssp HTHHHHHHHHHHHHHTTSSC----H--HHHHHHHHHHHHHHHHHHHHHTSSCCC---CCEEEEEECTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCc----H--HHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCeEEEEeCCCChhHHHHHHHHH
Confidence 33344555677777654321 1 111123444444444444333221 111235665532 34654 334
Q ss_pred HHhhcCcEEEEeeCCCCCccCHHHHHHhh-ccCcEEEEE--ecCCCCCccccCHHHHHHHHHHcC----CeEEEecc
Q 013675 242 AAQYFNIKLWRVPVDKEFRADVKAIKKYI-NRNTVLIVG--SAPGFPHGIIDPIQELGELALSHG----TCLHVDLC 311 (438)
Q Consensus 242 a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I-~~~t~~vv~--~~~~~~tG~iddi~~I~~la~~~~----i~lhVD~a 311 (438)
..+..|.+++.+-.+ +.++++.+++ ..++.+|.+ |.-.+ ...+.++++.+.+++.+ +++.+=|+
T Consensus 115 ~l~~~G~~Vi~LG~~----vp~e~iv~~~~~~~~d~v~l~~S~l~~--~~~~~~~~~i~~l~~~~~~~~v~v~vGG~ 185 (215)
T 3ezx_A 115 MLGANGFQIVDLGVD----VLNENVVEEAAKHKGEKVLLVGSALMT--TSMLGQKDLMDRLNEEKLRDSVKCMFGGA 185 (215)
T ss_dssp HHHHTSCEEEECCSS----CCHHHHHHHHHHTTTSCEEEEEECSSH--HHHTHHHHHHHHHHHTTCGGGSEEEEESS
T ss_pred HHHHCCCeEEEcCCC----CCHHHHHHHHHHcCCCEEEEEchhccc--CcHHHHHHHHHHHHHcCCCCCCEEEEECC
Confidence 455559999877653 5678885555 456777777 66543 45667888888888875 56766555
No 340
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=22.65 E-value=61 Score=30.44 Aligned_cols=52 Identities=19% Similarity=0.205 Sum_probs=35.4
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCC
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD 256 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~ 256 (438)
+..++|..+.-+|..+.+ .|++ -.|++|...-..-...++.+|.+++.++.+
T Consensus 76 v~aSsGN~g~alA~aa~~------~G~~-~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 76 VESSSGNTGVSLAHLGAI------RGYK-VIITMPESMSLERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp EEECSSHHHHHHHHHHHH------HTCE-EEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEeCCCHHHHHHHHHHHH------hCCC-EEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 344566677666666554 3431 357888876666677888999999998754
No 341
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=22.25 E-value=43 Score=36.78 Aligned_cols=31 Identities=6% Similarity=-0.099 Sum_probs=27.0
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
+++..|..++++++.+.||++||.|+.|.++
T Consensus 905 i~~~yGt~edfk~LV~alH~~GI~VIlDvV~ 935 (1108)
T 3ttq_A 905 TPTKYGTDGDLRATIQALHHANMQVMADVVD 935 (1108)
T ss_dssp SCCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3456788888999999999999999999885
No 342
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=22.09 E-value=53 Score=30.24 Aligned_cols=55 Identities=16% Similarity=0.127 Sum_probs=30.3
Q ss_pred eCCCCCccCHHHHHHhhcc----CcEEEE--EecCCCCCccccCHHHHHHHHHHc---CCeEEE
Q 013675 254 PVDKEFRADVKAIKKYINR----NTVLIV--GSAPGFPHGIIDPIQELGELALSH---GTCLHV 308 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~~----~t~~vv--~~~~~~~tG~iddi~~I~~la~~~---~i~lhV 308 (438)
|.++++.+|.+.+++.++. ....++ .+.+.+++=..+.-.++.+.+.+. .+++++
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 12 PMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 4566889999999888753 344433 333333322333344555555442 466665
No 343
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=22.02 E-value=61 Score=30.00 Aligned_cols=52 Identities=15% Similarity=0.153 Sum_probs=35.7
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCC
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVD 256 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~ 256 (438)
+..++|..+.-+|..+.+ .|++ -.|++|...-..-.+.++.+|.+++.++.+
T Consensus 66 v~~ssGN~g~a~A~~a~~------~G~~-~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 66 VDATSGNTGIALAYVAAA------RGYK-ITLTMPETMSLERKRLLCGLGVNLVLTEGA 117 (316)
T ss_dssp EESCCSHHHHHHHHHHHH------HTCC-EEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EEeCCcHHHHHHHHHHHH------cCCc-EEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 445667777766666543 4432 467888776566677888999999988753
No 344
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=21.96 E-value=2.9e+02 Score=24.24 Aligned_cols=7 Identities=14% Similarity=0.349 Sum_probs=3.2
Q ss_pred cEEEEEe
Q 013675 354 TSVVLYR 360 (438)
Q Consensus 354 ~g~l~~r 360 (438)
.++++.+
T Consensus 190 ~ai~~~~ 196 (287)
T 3bbl_A 190 TAIMTLN 196 (287)
T ss_dssp SEEEESS
T ss_pred cEEEECC
Confidence 4554443
No 345
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=21.93 E-value=31 Score=35.78 Aligned_cols=33 Identities=21% Similarity=0.054 Sum_probs=28.1
Q ss_pred cCCCCCccccCHHHHHHHHHHcC--C--eEEEecccc
Q 013675 281 APGFPHGIIDPIQELGELALSHG--T--CLHVDLCLG 313 (438)
Q Consensus 281 ~~~~~tG~iddi~~I~~la~~~~--i--~lhVD~a~g 313 (438)
+++...|+.++++++.+-||++| | .|++|.++-
T Consensus 230 ~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~N 266 (637)
T 1ji1_A 230 AVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGVFN 266 (637)
T ss_dssp EECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEECCS
T ss_pred hhccccCCHHHHHHHHHHHHhCCCCccceEEEEECcc
Confidence 34445788999999999999999 9 999999863
No 346
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=21.85 E-value=2.2e+02 Score=24.93 Aligned_cols=59 Identities=19% Similarity=0.174 Sum_probs=34.4
Q ss_pred EecCCCcCcHHHHHhhcCcEEEEeeCCCCCccCHHHHHHhh----ccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCe
Q 013675 230 IIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYI----NRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTC 305 (438)
Q Consensus 230 iv~~~~h~s~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I----~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~ 305 (438)
+.....-......+..+|+++.....+ +.++++..+ .+...+|++... ..++|+++|+.
T Consensus 112 Vg~~~~~~~~~~i~~ll~~~i~~~~~~-----~~ee~~~~i~~l~~~G~~vVVG~~~------------~~~~A~~~Gl~ 174 (225)
T 2pju_A 112 VTYQETIPALVAFQKTFNLRLDQRSYI-----TEEDARGQINELKANGTEAVVGAGL------------ITDLAEEAGMT 174 (225)
T ss_dssp EEESSCCHHHHHHHHHHTCCEEEEEES-----SHHHHHHHHHHHHHTTCCEEEESHH------------HHHHHHHTTSE
T ss_pred EeCchhhhHHHHHHHHhCCceEEEEeC-----CHHHHHHHHHHHHHCCCCEEECCHH------------HHHHHHHcCCc
Confidence 444444555667777888877776654 334444433 345556654322 26778888876
No 347
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=21.74 E-value=49 Score=30.90 Aligned_cols=55 Identities=15% Similarity=0.110 Sum_probs=30.9
Q ss_pred eCCCCCccCHHHHHHhhcc----CcEE--EEEecCCCCCccccCHHHHHHHHHHc---CCeEEE
Q 013675 254 PVDKEFRADVKAIKKYINR----NTVL--IVGSAPGFPHGIIDPIQELGELALSH---GTCLHV 308 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~~----~t~~--vv~~~~~~~tG~iddi~~I~~la~~~---~i~lhV 308 (438)
|.++++.+|.+.+++.++. .... +..+.+.+++=..+.-.++.+.+.+. .+++++
T Consensus 34 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 34 PFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 5566889999999887753 3333 33334433333334444555555442 366665
No 348
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=21.65 E-value=1.3e+02 Score=28.49 Aligned_cols=17 Identities=18% Similarity=0.259 Sum_probs=12.6
Q ss_pred HHHHhhcCcEEEEeeCC
Q 013675 240 DKAAQYFNIKLWRVPVD 256 (438)
Q Consensus 240 ~~a~~~~Gi~v~~v~~~ 256 (438)
.+..+-.|++.+++|+.
T Consensus 68 i~~i~~~G~N~vRipi~ 84 (376)
T 3ayr_A 68 FKVLIDNQFNVFRIPTT 84 (376)
T ss_dssp HHHHHHTTCCEEEECCC
T ss_pred HHHHHHcCCCEEEEeeE
Confidence 34445679999999985
No 349
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=21.53 E-value=1.4e+02 Score=25.94 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=28.8
Q ss_pred CcEEEEEecC-CCCCccccCHHHHHHHHHHcCCeEE
Q 013675 273 NTVLIVGSAP-GFPHGIIDPIQELGELALSHGTCLH 307 (438)
Q Consensus 273 ~t~~vv~~~~-~~~tG~iddi~~I~~la~~~~i~lh 307 (438)
.+..|++.-. -+..|.....+++.++|++||++++
T Consensus 158 ~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~i 193 (206)
T 3mio_A 158 QPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALI 193 (206)
T ss_dssp CSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEE
T ss_pred CceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 5777777661 4468999999999999999999976
No 350
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=21.40 E-value=1e+02 Score=27.36 Aligned_cols=10 Identities=20% Similarity=0.159 Sum_probs=4.9
Q ss_pred ceeEcCChHH
Q 013675 196 CGNMTSGGTE 205 (438)
Q Consensus 196 ~g~~t~ggt~ 205 (438)
.|++.++.+.
T Consensus 11 Igvv~~~~~~ 20 (291)
T 3egc_A 11 VGLIVSDIEN 20 (291)
T ss_dssp EEEEESCTTS
T ss_pred EEEEECCCcc
Confidence 4555554443
No 351
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=21.37 E-value=33 Score=36.20 Aligned_cols=32 Identities=22% Similarity=0.213 Sum_probs=27.7
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEecccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~g 313 (438)
++...|+.++++++.+-||++||.|+.|.++.
T Consensus 305 ~~~~yGt~~dfk~lV~~~H~~GI~VilD~V~N 336 (722)
T 3k1d_A 305 PTSRFGTPDDFRALVDALHQAGIGVIVDWVPA 336 (722)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEEEEee
Confidence 44557888999999999999999999998853
No 352
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=21.18 E-value=2.5e+02 Score=20.97 Aligned_cols=55 Identities=18% Similarity=0.131 Sum_probs=38.3
Q ss_pred CCccCHHHHHHhhcc-CcEEEEEecCCCCCccccC----HHHHHHHHHHcCCeE-EEeccc
Q 013675 258 EFRADVKAIKKYINR-NTVLIVGSAPGFPHGIIDP----IQELGELALSHGTCL-HVDLCL 312 (438)
Q Consensus 258 ~~~~d~~~Le~~I~~-~t~~vv~~~~~~~tG~idd----i~~I~~la~~~~i~l-hVD~a~ 312 (438)
+..-+.+.|++.+.+ ++..+++-.|-+..|...+ +.+.++..++.++++ .+|+-+
T Consensus 35 ~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERl 95 (98)
T 1iv0_A 35 TLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERF 95 (98)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSC
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 455678899998876 6778888888888787765 445554443337775 578764
No 353
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=21.15 E-value=1.7e+02 Score=26.28 Aligned_cols=82 Identities=20% Similarity=0.143 Sum_probs=46.4
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhcc-----
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR----- 272 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~----- 272 (438)
++..||+.++-.++.-... +.| -+|++.........+.+..+|.++..+.+|-. |.+++++.++.
T Consensus 32 vlVTGas~gIG~aia~~la----~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 32 AIVTGAGAGIGLAVARRLA----DEG---CHVLCADIDGDAADAAATKIGCGAAACRVDVS---DEQQIIAMVDACVAAF 101 (277)
T ss_dssp EEETTTTSTHHHHHHHHHH----HTT---CEEEEEESSHHHHHHHHHHHCSSCEEEECCTT---CHHHHHHHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHH----HCC---CEEEEEeCCHHHHHHHHHHcCCcceEEEecCC---CHHHHHHHHHHHHHHc
Confidence 5666666666554433221 256 56766554444555566666766666666532 55666555542
Q ss_pred -CcEEEEEecCCCCCccc
Q 013675 273 -NTVLIVGSAPGFPHGII 289 (438)
Q Consensus 273 -~t~~vv~~~~~~~tG~i 289 (438)
+...++-+++....+.+
T Consensus 102 g~iD~lvnnAg~~~~~~~ 119 (277)
T 3gvc_A 102 GGVDKLVANAGVVHLASL 119 (277)
T ss_dssp SSCCEEEECCCCCCCBCT
T ss_pred CCCCEEEECCCCCCCCCh
Confidence 45677777776555544
No 354
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=21.08 E-value=49 Score=34.54 Aligned_cols=31 Identities=16% Similarity=0.120 Sum_probs=27.2
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
++...|..++++++.+-||++|+.|++|.+.
T Consensus 99 i~~~~Gt~~d~~~lv~~~h~~gi~vi~D~V~ 129 (669)
T 3k8k_A 99 VNPQLGTESDFDRLVTEAHNRGIKIYLDYVM 129 (669)
T ss_dssp CCTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccccCCHHHHHHHHHHHHHcCCEEEEEECc
Confidence 4455788999999999999999999999884
No 355
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=21.07 E-value=3.8e+02 Score=22.68 Aligned_cols=54 Identities=19% Similarity=0.114 Sum_probs=25.3
Q ss_pred CeEEecCCCcCcHHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhccCcEEEEEecCCC
Q 013675 227 PEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINRNTVLIVGSAPGF 284 (438)
Q Consensus 227 ~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~~t~~vv~~~~~~ 284 (438)
..|+++...-..+.+ +..++.|+.++++. .=-+.+|.++-+...+.-++..++.
T Consensus 52 ~dVIISRGgta~~lr--~~~~iPVV~I~~s~--~Dil~al~~a~~~~~kIavvg~~~~ 105 (196)
T 2q5c_A 52 VDAIISRGATSDYIK--KSVSIPSISIKVTR--FDTMRAVYNAKRFGNELALIAYKHS 105 (196)
T ss_dssp CSEEEEEHHHHHHHH--TTCSSCEEEECCCH--HHHHHHHHHHGGGCSEEEEEEESSC
T ss_pred CeEEEECChHHHHHH--HhCCCCEEEEcCCH--hHHHHHHHHHHhhCCcEEEEeCcch
Confidence 446666655444444 23466777776541 0012344444333334444444443
No 356
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=20.90 E-value=58 Score=30.18 Aligned_cols=56 Identities=21% Similarity=0.165 Sum_probs=30.3
Q ss_pred eCCCCCccCHHHHHHhhc----cCcEEEE--EecCCCCCccccCHHHHHHHHHHc---CCeEEEe
Q 013675 254 PVDKEFRADVKAIKKYIN----RNTVLIV--GSAPGFPHGIIDPIQELGELALSH---GTCLHVD 309 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~----~~t~~vv--~~~~~~~tG~iddi~~I~~la~~~---~i~lhVD 309 (438)
|.++++.+|.+.+++.++ ..+..++ .+.+.+++=..+.-.++.+.+.+. .+++++=
T Consensus 23 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaG 87 (301)
T 1xky_A 23 PFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAG 87 (301)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeC
Confidence 556688999999988875 2344433 333333222223334555555442 4666543
No 357
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=20.90 E-value=1e+02 Score=23.73 Aligned_cols=59 Identities=8% Similarity=-0.121 Sum_probs=36.0
Q ss_pred ccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeCCC
Q 013675 271 NRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVH 345 (438)
Q Consensus 271 ~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s~h 345 (438)
+++.+.+++|+..-.|+.+ .+.+.+.++++|+.+.+.++-- ..++......|.+-+++|
T Consensus 4 ~~~mkIlL~C~aGmSTsll--v~km~~~a~~~gi~v~i~a~~~--------------~~~~~~~~~~DvvLLgPQ 62 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQL--ANAINEGANLTEVRVIANSGAY--------------GAHYDIMGVYDLIILAPQ 62 (108)
T ss_dssp -CCEEEEEEESSSSHHHHH--HHHHHHHHHHHTCSEEEEEEET--------------TSCTTTGGGCSEEEECGG
T ss_pred ccCceEEEECCCCCCHHHH--HHHHHHHHHHCCCceEEEEcch--------------HHHHhhccCCCEEEEChH
Confidence 3444555555554445553 5788899999999888776410 022223345688887776
No 358
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=20.89 E-value=76 Score=28.85 Aligned_cols=16 Identities=13% Similarity=0.025 Sum_probs=11.8
Q ss_pred HHHhhcCcEEEEeeCC
Q 013675 241 KAAQYFNIKLWRVPVD 256 (438)
Q Consensus 241 ~a~~~~Gi~v~~v~~~ 256 (438)
+.++.+|++.+++|+.
T Consensus 38 ~~i~~~G~N~VRi~~~ 53 (294)
T 2whl_A 38 PAIAEQGANTIRIVLS 53 (294)
T ss_dssp HHHHHTTCSEEEEEEC
T ss_pred HHHHHcCCCEEEEEec
Confidence 3445579999999875
No 359
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=20.87 E-value=58 Score=29.98 Aligned_cols=56 Identities=20% Similarity=0.150 Sum_probs=31.1
Q ss_pred eCCCCCccCHHHHHHhhcc----CcEEEE--EecCCCCCccccCHHHHHHHHHHc---CCeEEEe
Q 013675 254 PVDKEFRADVKAIKKYINR----NTVLIV--GSAPGFPHGIIDPIQELGELALSH---GTCLHVD 309 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~~----~t~~vv--~~~~~~~tG~iddi~~I~~la~~~---~i~lhVD 309 (438)
|.++++.+|.+.+++.++. ....++ .+.+.+++=..+.-.++.+.+.+. .+++++=
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 76 (292)
T 2ojp_A 12 PMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAG 76 (292)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 4566899999999988763 344433 333333332333344555555442 4666543
No 360
>1vi1_A Fatty acid/phospholipid synthesis protein PLSX; structural genomics, unknown function; HET: MSE; 2.95A {Bacillus subtilis} SCOP: c.77.1.4
Probab=20.83 E-value=1.9e+02 Score=27.24 Aligned_cols=122 Identities=10% Similarity=0.019 Sum_probs=62.8
Q ss_pred ceeEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhc----
Q 013675 196 CGNMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVDKEFRADVKAIKKYIN---- 271 (438)
Q Consensus 196 ~g~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~---- 271 (438)
.+++|.|.|.+++.+.. ......+|++++.++..-+.. -+-.+...++..+-..+++.|.+.+.
T Consensus 95 Da~Vsag~t~al~~a~~---~vl~~~~G~~r~a~~~~~p~~---------~~~~~~l~D~g~n~~~~~e~L~~~a~~~~~ 162 (345)
T 1vi1_A 95 DACISAGNTGALMTAGL---FIVGRIKGIDRPALAPTLPTV---------SGDGFLLLDVGANVDAKPEHLVQYAIMGSV 162 (345)
T ss_dssp SEEEECSCHHHHHHHHH---HTTCBCTTCSSCEEECEECCS---------SSCCEEEECSSSCSSCCHHHHHHHHHHHHH
T ss_pred cEEEcCCcHHHHHHHHH---HHHhhccCCCcEEEEEEecCC---------CCcEEEEEeccCCCCCCHHHHHHHHHHHHH
Confidence 34777777766644332 233334676666443322211 01013333443344567777655441
Q ss_pred --------cCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEeccccchhhhhhhhcCCCCCCCccCCCCccEEEeC
Q 013675 272 --------RNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVD 343 (438)
Q Consensus 272 --------~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a~gg~~~pf~~~~g~~~p~~~~~~~gvdsis~s 343 (438)
++|+.-+++.++...=-.+.+.+-.+++++. -.+.+||..-+-. .+. ..+|.+.++
T Consensus 163 ~a~~~~Gi~~PrValLN~Ge~~~~g~e~i~~A~~ll~~~-~~i~~~G~ve~d~------------~~~---G~aDVvV~d 226 (345)
T 1vi1_A 163 YSQQVRGVTSPRVGLLNVGTEDKKGNELTKQTFQILKET-ANINFIGNVEARD------------LLD---DVADVVVTD 226 (345)
T ss_dssp HHHHTSCCSSCEEEEEESSSSTTCSCHHHHHHHHHHHSC-TTSEEEEEEEGGG------------GGG---TSCSEEECC
T ss_pred HHHHHcCCCCCeEEEEeCCCCCCCCCHHHHHHHHHHhcC-CCCeEEeccCCCc------------ccc---CCCCEEEeC
Confidence 2577666776654332234467777778765 1246666632110 111 246899998
Q ss_pred CC
Q 013675 344 VH 345 (438)
Q Consensus 344 ~h 345 (438)
.|
T Consensus 227 ~~ 228 (345)
T 1vi1_A 227 GF 228 (345)
T ss_dssp HH
T ss_pred ch
Confidence 88
No 361
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=20.76 E-value=1.9e+02 Score=22.66 Aligned_cols=50 Identities=12% Similarity=0.045 Sum_probs=37.9
Q ss_pred ccCHHHHHHhhccCcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEEEecc
Q 013675 260 RADVKAIKKYINRNTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLHVDLC 311 (438)
Q Consensus 260 ~~d~~~Le~~I~~~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lhVD~a 311 (438)
.+++++++..+++++-++++-.+. .+.+.+-+++.+..+++||-+.+-..
T Consensus 48 ~l~~~~l~~ll~~~~evliiGtG~--~~~~~~~~~~~~~l~~~gI~ve~m~T 97 (122)
T 2ab1_A 48 GVQPADVKEVVEKGVQTLVIGRGM--SEALKVPSSTVEYLKKHGIDVRVLQT 97 (122)
T ss_dssp CCCHHHHHHHHTTCCSEEEEEECS--SCCSCCCHHHHHHHHHTTCEEEEECH
T ss_pred HCCHHHHHHHhhCCCCEEEECCCC--CCccCCCHHHHHHHHHcCCEEEEeCH
Confidence 478899999999888777766664 34554567888999999998766533
No 362
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A
Probab=20.72 E-value=48 Score=36.41 Aligned_cols=29 Identities=10% Similarity=-0.058 Sum_probs=25.6
Q ss_pred CCCccccCHHHHHHHHHHcCCeEEEeccc
Q 013675 284 FPHGIIDPIQELGELALSHGTCLHVDLCL 312 (438)
Q Consensus 284 ~~tG~iddi~~I~~la~~~~i~lhVD~a~ 312 (438)
...|..++++++.+-||++||.|++|-++
T Consensus 740 ~~~Gt~~efk~lV~alH~~GI~VIlDvV~ 768 (1039)
T 3klk_A 740 NKYGSDEDLRNALQALHKAGLQAIADWVP 768 (1039)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 44678888999999999999999999885
No 363
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=20.54 E-value=61 Score=30.51 Aligned_cols=55 Identities=22% Similarity=0.158 Sum_probs=29.6
Q ss_pred eCCCCCccCHHHHHHhhcc----CcEEEE--EecCCCCCccccCHHHHHHHHHHc---CCeEEE
Q 013675 254 PVDKEFRADVKAIKKYINR----NTVLIV--GSAPGFPHGIIDPIQELGELALSH---GTCLHV 308 (438)
Q Consensus 254 ~~~~~~~~d~~~Le~~I~~----~t~~vv--~~~~~~~tG~iddi~~I~~la~~~---~i~lhV 308 (438)
|.++++.+|.+.+++.++. .+..++ .+.+.+++=..+.-.++.+.+.+. .+++++
T Consensus 45 PF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 45 PADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp CBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4456888999998887752 343333 333333332233344555555442 466665
No 364
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=20.41 E-value=36 Score=36.18 Aligned_cols=32 Identities=19% Similarity=0.142 Sum_probs=27.7
Q ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEecccc
Q 013675 282 PGFPHGIIDPIQELGELALSHGTCLHVDLCLG 313 (438)
Q Consensus 282 ~~~~tG~iddi~~I~~la~~~~i~lhVD~a~g 313 (438)
++...|..++++++.+-||++||.|++|.++.
T Consensus 243 ~~~~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 274 (755)
T 3aml_A 243 VSSRSGTPEDLKYLVDKAHSLGLRVLMDVVHS 274 (755)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 34557889999999999999999999998863
No 365
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=20.17 E-value=1.4e+02 Score=27.47 Aligned_cols=67 Identities=10% Similarity=0.102 Sum_probs=42.9
Q ss_pred HHHHHhhcCcEEEEeeCCCCCccCHHHHHHhhcc--CcEEEEEecCCCCCccccCHHHHHHHHHHcCCeEE-Eecc
Q 013675 239 YDKAAQYFNIKLWRVPVDKEFRADVKAIKKYINR--NTVLIVGSAPGFPHGIIDPIQELGELALSHGTCLH-VDLC 311 (438)
Q Consensus 239 ~~~a~~~~Gi~v~~v~~~~~~~~d~~~Le~~I~~--~t~~vv~~~~~~~tG~iddi~~I~~la~~~~i~lh-VD~a 311 (438)
+.++++.+|.++.....+.+..-..+.++..+.. ++..|++.. .. .....+.+.+++.|++++ +|..
T Consensus 26 ~~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~-~~-----~~~~~~~~~~~~~giPvV~~~~~ 95 (350)
T 3h75_A 26 MQAAARDLGLDLRILYAERDPQNTLQQARELFQGRDKPDYLMLVN-EQ-----YVAPQILRLSQGSGIKLFIVNSP 95 (350)
T ss_dssp HHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEEC-CS-----SHHHHHHHHHTTSCCEEEEEESC
T ss_pred HHHHHHHcCCeEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeC-ch-----hhHHHHHHHHHhCCCcEEEEcCC
Confidence 4456667799888876654333335667777874 777777753 21 124566777888899864 5544
No 366
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=20.09 E-value=3.1e+02 Score=25.76 Aligned_cols=51 Identities=12% Similarity=0.129 Sum_probs=33.3
Q ss_pred eEcCChHHHHHHHHHHHHHHHHHhcCCCCCeEEecCCCcCcHHHHHhhcCcEEEEeeC
Q 013675 198 NMTSGGTESILLAVKSSRDYMRNKRGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPV 255 (438)
Q Consensus 198 ~~t~ggt~a~~~al~a~~~~~~~~~G~~~~~Viv~~~~h~s~~~a~~~~Gi~v~~v~~ 255 (438)
+..++|..+.-+|..+.+ .|++ -.|++|...-....+.++.+|.+++.++-
T Consensus 97 v~aSsGN~g~alA~aa~~------~G~~-~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~ 147 (364)
T 4h27_A 97 VCSSSGNAGMAAAYAARQ------LGVP-ATIVVPGTTPALTIERLKNEGATVKVVGE 147 (364)
T ss_dssp EECCSSHHHHHHHHHHHH------HTCC-EEEEEETTSCHHHHHHHHTTTCEEEEECS
T ss_pred EEeCCChHHHHHHHHHHH------hCCc-eEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 444556666655555443 4532 36788887655566777889999988863
No 367
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=20.08 E-value=2.3e+02 Score=25.05 Aligned_cols=7 Identities=14% Similarity=0.164 Sum_probs=3.5
Q ss_pred ceeEcCC
Q 013675 196 CGNMTSG 202 (438)
Q Consensus 196 ~g~~t~g 202 (438)
.|++++.
T Consensus 11 Ig~i~~~ 17 (290)
T 2rgy_A 11 IGLFVPT 17 (290)
T ss_dssp EEEECSC
T ss_pred EEEEeCC
Confidence 4555543
Done!