BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>013676
MLLCLLPIRSRTMSNLLSFELAISTPKSALEKSSLTSVKTPLISISSTKQLKITEASHSF
KTNTLSSSHRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQ
WRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLK
EIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDK
TLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQT
MKNEVKDIMYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHESK
NPKALYTTPKELHKWITIMLDAYHLNKEETDMREAKQMTQPVVIQRLLILKETIEEEYLG
QATFQTMQTKEDTESMEL

High Scoring Gene Products

Symbol, full name Information P value
AT4G37920 protein from Arabidopsis thaliana 1.1e-142
AT1G36320 protein from Arabidopsis thaliana 3.0e-78
mhcA
myosin heavy chain
gene from Dictyostelium discoideum 7.3e-06
Myh8
myosin, heavy polypeptide 8, skeletal muscle, perinatal
protein from Mus musculus 0.00098

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  013676
        (438 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2121036 - symbol:AT4G37920 "AT4G37920" species...  1395  1.1e-142  1
TAIR|locus:2035957 - symbol:AT1G36320 "AT1G36320" species...   787  3.0e-78   1
DICTYBASE|DDB_G0286355 - symbol:mhcA "myosin heavy chain"...   143  7.3e-06   1
MGI|MGI:1339712 - symbol:Myh8 "myosin, heavy polypeptide ...   123  0.00098   1


>TAIR|locus:2121036 [details] [associations]
            symbol:AT4G37920 "AT4G37920" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161592 GO:GO:0009941
            EMBL:AL035538 GO:GO:0009535 PIR:T05619 EMBL:BT002988
            IPI:IPI00538492 RefSeq:NP_195505.2 UniGene:At.43573 PaxDb:Q84WN0
            PRIDE:Q84WN0 EnsemblPlants:AT4G37920.1 GeneID:829948
            KEGG:ath:AT4G37920 TAIR:At4g37920 eggNOG:NOG298618
            HOGENOM:HOG000237806 OMA:TIEDEYL PhylomeDB:Q84WN0
            ProtClustDB:CLSN2918855 Genevestigator:Q84WN0 Uniprot:Q84WN0
        Length = 427

 Score = 1395 (496.1 bits), Expect = 1.1e-142, P = 1.1e-142
 Identities = 285/426 (66%), Positives = 339/426 (79%)

Query:    13 MSNLLSFELAISTPKSALE---KSSLTSVKTPLISISSTKQLKITEASH-SFKTNTLSSS 68
             M+NLL   +  S+    L    K+S T    P  +  +  + KI ++S  +F T+T++ +
Sbjct:     1 MANLLETSIFFSSADKLLSFPPKNSQTH-HLPFSAFINGGR-KIRKSSTITFATDTVTYN 58

Query:    69 HRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFR 128
               TS +V   V       ED  E EVAEGYT+ QFCDKIID+FLNEKP+VKQW+ YLV R
Sbjct:    59 GTTSAEVKSSV-------EDPMEVEVAEGYTMAQFCDKIIDLFLNEKPKVKQWKTYLVLR 111

Query:   129 EDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTD 188
             ++WNKY  +FY RCR RAD E++P +K+KL+SL  KVKKID EME H +LLKEIQ++PTD
Sbjct:   112 DEWNKYSVNFYKRCRIRADTETDPILKQKLVSLESKVKKIDKEMEKHNDLLKEIQENPTD 171

Query:   189 INAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETL 248
             INA+ A+RR+DFTGEFFRY++L+SET D LED DAVARLATRCLSAVSAYD TLE VETL
Sbjct:   172 INAIAAKRRRDFTGEFFRYVTLLSETLDGLEDRDAVARLATRCLSAVSAYDNTLESVETL 231

Query:   249 DSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDI 308
             D+AQAKF+DILNSPSVD ACEKI+SLAKAKELDSSLILLIN A+A+AK SQT+ NE KDI
Sbjct:   232 DTAQAKFEDILNSPSVDSACEKIRSLAKAKELDSSLILLINSAYAAAKESQTVTNEAKDI 291

Query:   309 MYCLYKATKSSLRGIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHESKNPKALYTT 368
             MY LYKATKSSLR I PKEIKLLKYLLNI DPEERFSALATAFSPG +HE+K+PKALYTT
Sbjct:   292 MYHLYKATKSSLRSITPKEIKLLKYLLNITDPEERFSALATAFSPGDDHEAKDPKALYTT 351

Query:   369 PKELHKWITIMLDAYHLNKEETDMREAKQMTQPVVIQRLLILKETIEEEYLGQATFQTMQ 428
             PKELHKWI IMLDAYHLNKEETD++EAKQM+QP+VIQRL ILK+TIE+EYL + T    +
Sbjct:   352 PKELHKWIKIMLDAYHLNKEETDIKEAKQMSQPIVIQRLFILKDTIEDEYLDKKTIVADE 411

Query:   429 TKEDTE 434
             T +  E
Sbjct:   412 TPKKEE 417


>TAIR|locus:2035957 [details] [associations]
            symbol:AT1G36320 "AT1G36320" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0009073 "aromatic amino acid family biosynthetic
            process" evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
            evidence=RCA] EMBL:CP002684 EMBL:AC021199 HOGENOM:HOG000237806
            EMBL:AY057493 EMBL:AY085614 EMBL:AY103296 IPI:IPI00539746
            PIR:D86484 RefSeq:NP_564471.1 UniGene:At.18045 PRIDE:Q9C8X8
            EnsemblPlants:AT1G36320.1 GeneID:840539 KEGG:ath:AT1G36320
            TAIR:At1g36320 InParanoid:Q9C8X8 OMA:EVRILKY PhylomeDB:Q9C8X8
            ProtClustDB:CLSN2688352 Genevestigator:Q9C8X8 Uniprot:Q9C8X8
        Length = 414

 Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
 Identities = 149/338 (44%), Positives = 233/338 (68%)

Query:    84 EMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCR 143
             E ++D SE+ V +   + + CDK+I+VF+ +KP    WR+ L F ++W+  R  FY RC+
Sbjct:    77 EEKKDGSEEVVVDNQRMIKVCDKLIEVFMVDKPTPSDWRRLLAFSKEWDSIRPHFYKRCQ 136

Query:   144 TRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSP-TDINAVVARRRKDFTG 202
              RAD E  P MK K+  LARK+K++D++++ H ELL  I+ +P  +I  +VARRRKDFT 
Sbjct:   137 ERADSEDNPEMKHKVHRLARKLKEVDEDIQRHNELLNVIKRTPPAEIGELVARRRKDFTN 196

Query:   203 EFFRYLSLVSETH-DSLEDCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNS 261
             EFF +L  V+E++ D+ ++ +A+A L    ++AV AYD + E ++ L++A+ K  DI+NS
Sbjct:   197 EFFEHLHTVAESYYDNPDEQNALASLGKLSIAAVQAYDTSTESIDALNAAEMKLQDIINS 256

Query:   262 PSVDVACEKIKSLAKAKELDSSLILLINGAWASAKASQTMKNEVKDIMYCLYKATKSSLR 321
             PS+D AC KI SLA+  +LDS+L+L+I  AW++AK S  MK EVKDI+Y LY   + +L+
Sbjct:   257 PSLDAACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYVTARGNLQ 316

Query:   322 GIAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHESKNPKALYTTPKELHKWITIMLD 381
              + PKE+++LKYLL+I DP+E+ SAL  AF+PG E E  +   LYTTP+ L   +  +L+
Sbjct:   317 RLMPKEVRILKYLLSIEDPQEQISALQDAFTPGDELEGTDVDYLYTTPEHLQSLMKTVLE 376

Query:   382 AYHLNKEETDMREAKQMTQPVVIQRLLILKETIEEEYL 419
             AYH ++E + ++EAK +  P +I ++  LK+ +E++Y+
Sbjct:   377 AYHFSREGSLVKEAKDLMHPELIAKIEQLKKLVEKKYM 414


>DICTYBASE|DDB_G0286355 [details] [associations]
            symbol:mhcA "myosin heavy chain" species:44689
            "Dictyostelium discoideum" [GO:0032009 "early phagosome"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0071889 "14-3-3 protein binding" evidence=IPI] [GO:0000910
            "cytokinesis" evidence=IGI;IMP] [GO:0033275 "actin-myosin filament
            sliding" evidence=IDA] [GO:0030898 "actin-dependent ATPase
            activity" evidence=IDA] [GO:0000146 "microfilament motor activity"
            evidence=IDA] [GO:0051015 "actin filament binding"
            evidence=IEA;IDA] [GO:0060328 "cytoplasmic actin-based contraction
            involved in forward cell motility" evidence=IMP] [GO:0034461
            "uropod retraction" evidence=IMP] [GO:0031270 "pseudopodium
            retraction" evidence=IMP] [GO:0030866 "cortical actin cytoskeleton
            organization" evidence=IDA] [GO:0005938 "cell cortex"
            evidence=IEA;IDA] [GO:0032060 "bleb assembly" evidence=IMP]
            [GO:0006935 "chemotaxis" evidence=IMP] [GO:0008104 "protein
            localization" evidence=IMP] [GO:0030837 "negative regulation of
            actin filament polymerization" evidence=IMP] [GO:0030038
            "contractile actin filament bundle assembly" evidence=IMP]
            [GO:0046847 "filopodium assembly" evidence=IMP] [GO:0003774 "motor
            activity" evidence=IEA;IDA] [GO:0001931 "uropod" evidence=IDA]
            [GO:0005524 "ATP binding" evidence=IEA;IDA] [GO:0030554 "adenyl
            nucleotide binding" evidence=IDA] [GO:0006928 "cellular component
            movement" evidence=IGI;IMP] [GO:0005826 "actomyosin contractile
            ring" evidence=IDA] [GO:0032154 "cleavage furrow" evidence=IDA]
            [GO:0031143 "pseudopodium" evidence=IDA] [GO:0005856 "cytoskeleton"
            evidence=IDA] [GO:0031154 "culmination involved in sorocarp
            development" evidence=IMP] [GO:0042803 "protein homodimerization
            activity" evidence=IDA] [GO:0045179 "apical cortex" evidence=IDA]
            [GO:0016459 "myosin complex" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
            [GO:0003779 "actin binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0031254 "trailing edge" evidence=IDA]
            [GO:0042641 "actomyosin" evidence=IDA] [GO:0032982 "myosin
            filament" evidence=IDA] [GO:0031034 "myosin filament assembly"
            evidence=IDA] [GO:0016460 "myosin II complex" evidence=IDA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000048
            InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
            InterPro:IPR008989 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
            PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
            dictyBase:DDB_G0286355 GO:GO:0005524 GO:GO:0042803 GO:GO:0008104
            GenomeReviews:CM000153_GR GO:GO:0031034 GO:GO:0030866 GO:GO:0051015
            GO:GO:0006935 GO:GO:0000910 GO:GO:0045179 GO:GO:0032009
            GO:GO:0000146 GO:GO:0033275 PDB:1G8X PDBsum:1G8X GO:GO:0005826
            EMBL:AAFI02000085 GO:GO:0030837 GO:GO:0046847 GO:GO:0031154
            GO:GO:0032060 eggNOG:COG5022 GO:GO:0001931 GO:GO:0042641 PDB:2AKA
            PDBsum:2AKA PDB:1JWY PDB:1JX2 PDBsum:1JWY PDBsum:1JX2 GO:GO:0016460
            GO:GO:0030898 GO:GO:0032982 KO:K10352 SUPFAM:SSF50084 EMBL:M14628
            PIR:A26655 RefSeq:XP_637740.1 PDB:1D0X PDB:1D0Y PDB:1D0Z PDB:1D1A
            PDB:1D1B PDB:1D1C PDB:1FMV PDB:1FMW PDB:1LVK PDB:1MMA PDB:1MMD
            PDB:1MMG PDB:1MMN PDB:1MND PDB:1MNE PDB:1Q5G PDB:1VOM PDB:1W9I
            PDB:1W9J PDB:1W9K PDB:1W9L PDB:1YV3 PDB:2JHR PDB:2JJ9 PDB:2X9H
            PDB:2XEL PDB:2XO8 PDB:2Y0R PDB:2Y8I PDB:2Y9E PDB:3BZ7 PDB:3BZ8
            PDB:3BZ9 PDB:3MJX PDB:3MKD PDB:3MNQ PDB:3MYH PDB:3MYK PDB:3MYL
            PDB:4AE3 PDBsum:1D0X PDBsum:1D0Y PDBsum:1D0Z PDBsum:1D1A
            PDBsum:1D1B PDBsum:1D1C PDBsum:1FMV PDBsum:1FMW PDBsum:1LVK
            PDBsum:1MMA PDBsum:1MMD PDBsum:1MMG PDBsum:1MMN PDBsum:1MND
            PDBsum:1MNE PDBsum:1Q5G PDBsum:1VOM PDBsum:1W9I PDBsum:1W9J
            PDBsum:1W9K PDBsum:1W9L PDBsum:1YV3 PDBsum:2JHR PDBsum:2JJ9
            PDBsum:2X9H PDBsum:2XEL PDBsum:2XO8 PDBsum:2Y0R PDBsum:2Y8I
            PDBsum:2Y9E PDBsum:3BZ7 PDBsum:3BZ8 PDBsum:3BZ9 PDBsum:3MJX
            PDBsum:3MKD PDBsum:3MNQ PDBsum:3MYH PDBsum:3MYK PDBsum:3MYL
            PDBsum:4AE3 ProteinModelPortal:P08799 SMR:P08799 DIP:DIP-46078N
            IntAct:P08799 STRING:P08799 PRIDE:P08799 EnsemblProtists:DDB0191444
            GeneID:8625606 KEGG:ddi:DDB_G0286355 OMA:NTMFILE
            ProtClustDB:CLSZ2430102 EvolutionaryTrace:P08799 GO:GO:0030038
            GO:GO:0060328 GO:GO:0031270 GO:GO:0034461 Uniprot:P08799
        Length = 2116

 Score = 143 (55.4 bits), Expect = 7.3e-06, P = 7.3e-06
 Identities = 88/417 (21%), Positives = 184/417 (44%)

Query:    33 SSLTSVKTPLISISSTKQLKITEASHSFKTNTLSSSHRTSRQVCGVVTANAEMEEDQSEK 92
             S L S    L  I ST + ++       +   L+ S+   +Q         E++ +    
Sbjct:  1160 SELQSTIAKLEKIKSTLEGEVARLQGELEAEQLAKSN-VEKQ-----KKKVELDLEDKSA 1213

Query:    93 EVAEGYTLTQFCDKI---IDVFLNE-KPRVKQWRKYLVFREDWNKYRESFYNRCRTR--A 146
             ++AE     Q  DK+   ++  L+E + ++ +     V  +  NK+ E+ +N  +    A
Sbjct:  1214 QLAEETAAKQALDKLKKKLEQELSEVQTQLSEANNKNVNSDSTNKHLETSFNNLKLELEA 1273

Query:   147 DEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFR 206
             +++++  +++K + L  ++K +++++E   +  +  +    D+   V+   KD   E   
Sbjct:  1274 EQKAKQALEKKRLGLESELKHVNEQLEEEKKQKESNEKRKVDLEKEVSEL-KDQIEEEVA 1332

Query:   207 YLSLVSETHDSLE-DCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNSPS-V 264
                 V+E  +  E + D + R   +    VS+ DK++E ++TL   QAK +++ N+    
Sbjct:  1333 SKKAVTEAKNKKESELDEIKR---QYADVVSSRDKSVEQLKTL---QAKNEELRNTAEEA 1386

Query:   265 DVACEKI-KSLAKAK-ELDSSLILLINGAWASAKASQTMKNEVKDIMYCLYKATKSSLRG 322
             +   ++  +S  KA+ +L+ ++  L        KA + MK    D     Y++TKS L  
Sbjct:  1387 EGQLDRAERSKKKAEFDLEEAVKNLEEETAKKVKAEKAMKKAETD-----YRSTKSELDD 1441

Query:   323 IAPKEIKLLKYLLNIIDPEERFSALATAFSPGSEHESKNPKALYTTPKELHKWITIMLDA 382
                K +   +Y+  I    E  S L +      E  +   KA  T    L   +   +DA
Sbjct:  1442 A--KNVSSEQYV-QIKRLNEELSELRSVLEEADERCNSAIKAKKTAESALES-LKDEIDA 1497

Query:   383 YHLNKEETDMREAKQMTQPVV-IQRLLILKE-TIEEEYLGQ--ATFQTMQTKEDTES 435
              +  K + + R++K++   V  ++  L  K  T+  E++ +  A    ++ + D E+
Sbjct:  1498 ANNAKAKAE-RKSKELEVRVAELEESLEDKSGTVNVEFIRKKDAEIDDLRARLDRET 1553


>MGI|MGI:1339712 [details] [associations]
            symbol:Myh8 "myosin, heavy polypeptide 8, skeletal muscle,
            perinatal" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
            [GO:0003779 "actin binding" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008152 "metabolic
            process" evidence=IEA] [GO:0016459 "myosin complex" evidence=IDA]
            [GO:0032982 "myosin filament" evidence=IEA] InterPro:IPR000048
            InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
            Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
            PROSITE:PS50096 SMART:SM00015 SMART:SM00242 MGI:MGI:1339712
            GO:GO:0005524 GO:GO:0030016 GO:GO:0003774 GO:GO:0016459
            GO:GO:0032982 HOVERGEN:HBG004704 KO:K10352 InterPro:IPR015650
            PANTHER:PTHR13140:SF22 HOGENOM:HOG000173959
            GeneTree:ENSGT00680000099790 OrthoDB:EOG43N7BR EMBL:AL596129
            CTD:4626 OMA:QLKRNHT EMBL:M12289 IPI:IPI00265380 PIR:B24733
            RefSeq:NP_796343.2 UniGene:Mm.340163 ProteinModelPortal:P13542
            SMR:P13542 STRING:P13542 PhosphoSite:P13542 PRIDE:P13542
            Ensembl:ENSMUST00000019625 GeneID:17885 KEGG:mmu:17885
            InParanoid:P13542 NextBio:292697 Bgee:P13542 Genevestigator:P13542
            Uniprot:P13542
        Length = 1937

 Score = 123 (48.4 bits), Expect = 0.00098, P = 0.00098
 Identities = 76/315 (24%), Positives = 138/315 (43%)

Query:    31 EKSSLTSV--KTPLISISSTKQLKITEASHSFKTNTLSSSHRTSRQVCGVVTANAEMEED 88
             EK +L S   ++   S    ++LK      +   N L+ + ++SR  C ++    + EE+
Sbjct:  1296 EKDALVSQLSRSKQASTQQIEELKRQLEEETKAKNALAHALQSSRHDCDLL--REQYEEE 1353

Query:    89 QSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWR-KY---LVFR-EDWNKYRESFYNRCR 143
             Q  K  AE   L +   K      N +  V QWR KY    + R E+  + ++    R +
Sbjct:  1354 QEGK--AE---LQRALSKA-----NSE--VAQWRTKYETDAIQRTEELEEAKKKLAQRLQ 1401

Query:   144 TRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGE 203
               A EE    +  K  SL +  +++ +E+E   +L+ +++ +     A + +++++F   
Sbjct:  1402 --AAEEHVEAVNAKCASLEKTKQRLQNEVE---DLMIDVERTNAAC-AALDKKQRNFDKV 1455

Query:   204 FFRYLSLVSETHDSLEDCDAVAR-LATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNSP 262
                +     ET   LE C   +R L+T      +AY+++L+H+ETL          ++  
Sbjct:  1456 LSEWRQKYEETQAELESCQKESRTLSTELFKVKNAYEESLDHLETLRRENKNLQQEISDL 1515

Query:   263 SVDVA--CEKIKSLAKAKELDSSLILLINGAWASAKAS-QTMKNEVKDIMYCLYKATKSS 319
             +  +A   + I  L K K+        I  A   A+AS +  + ++  I   L +     
Sbjct:  1516 TEQIAEGGKHIHELEKIKKQVEQEKCEIQAALEEAEASLEHEEGKILRIQLELNQVKSEI 1575

Query:   320 LRGIAPK--EIKLLK 332
              R IA K  EI  LK
Sbjct:  1576 DRKIAEKDEEIDQLK 1590


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.127   0.350    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      438       438   0.00088  118 3  11 23  0.43    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  259 KB (2139 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  46.22u 0.12s 46.34t   Elapsed:  00:00:02
  Total cpu time:  46.22u 0.12s 46.34t   Elapsed:  00:00:02
  Start:  Sat May 11 12:09:12 2013   End:  Sat May 11 12:09:14 2013

Back to top