Your job contains 1 sequence.
>013677
MLLILFSIIKMAATSGVKRARMTLDEEQPSVHVIYNSLTRASKQKLEELLQQWSEWQAQF
GSSSNDPNEGIEFGEQTFFPAIRVGKAKGPAVSFWIDNQTRNQQNKNFIPSDSHGTPLYD
RGYALGLTSGDGSSNLEGGLEIIDDASRCFNCGSYSHSLKECPKPRDKDAVNNARKQHKS
KRNQNSASRNPMRYYQNSAGGKYDGLRPGALDAETRQLLGLGELDPPPWLHRMRELGYPP
GYLDSEDDDQPSGITIYADGEIKEGQEDGEIIETGRPASKRKMTTEFPGINAPIPENADE
RLWAARPSSSDSSRDRSHHRLNHHSESISRGRYHEQRWSRDYRDDGPPGVDPVSSYPPRY
GGYDYYSSHSRSPTRGRSYSDRDRDDYASHGSYSSPYSNRHTSPPDYDLDRYRDDYSREY
LSRSMDEYDRFRPRGRWW
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013677
(438 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2159818 - symbol:AT5G38600 species:3702 "Arabi... 1054 1.5e-106 1
TAIR|locus:2809302 - symbol:AT1G67210 species:3702 "Arabi... 952 3.7e-99 2
UNIPROTKB|E2QXB5 - symbol:ZCCHC8 "Uncharacterized protein... 253 5.0e-19 1
MGI|MGI:1917900 - symbol:Zcchc8 "zinc finger, CCHC domain... 250 1.2e-18 1
UNIPROTKB|Q5F3D1 - symbol:ZCCHC8 "Zinc finger CCHC domain... 246 1.4e-18 2
RGD|1309774 - symbol:Zcchc8 "zinc finger, CCHC domain con... 249 1.5e-18 1
UNIPROTKB|F1MM78 - symbol:ZCCHC8 "Uncharacterized protein... 244 6.1e-18 1
UNIPROTKB|F1NEG3 - symbol:F1NEG3 "Uncharacterized protein... 242 9.6e-18 1
UNIPROTKB|Q6NZY4 - symbol:ZCCHC8 "Zinc finger CCHC domain... 242 1.0e-17 1
ZFIN|ZDB-GENE-060526-6 - symbol:zcchc8 "zinc finger, CCHC... 236 5.1e-17 1
UNIPROTKB|F1REW6 - symbol:LOC100739132 "Uncharacterized p... 226 7.5e-16 1
UNIPROTKB|F5GX80 - symbol:ZCCHC8 "Zinc finger CCHC domain... 195 5.7e-15 1
UNIPROTKB|F5H6J5 - symbol:ZCCHC8 "Zinc finger CCHC domain... 195 5.7e-15 1
FB|FBgn0035021 - symbol:CG4622 species:7227 "Drosophila m... 209 4.2e-14 1
>TAIR|locus:2159818 [details] [associations]
symbol:AT5G38600 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003676
InterPro:IPR006568 Pfam:PF04046 SMART:SM00581 eggNOG:NOG242619
KO:K13128 ProtClustDB:CLSN2689057 EMBL:AY059738 EMBL:AY096461
IPI:IPI00529308 RefSeq:NP_568558.1 UniGene:At.68497 UniGene:At.8680
IntAct:Q93YW4 PaxDb:Q93YW4 PRIDE:Q93YW4 EnsemblPlants:AT5G38600.1
GeneID:833850 KEGG:ath:AT5G38600 TAIR:At5g38600
HOGENOM:HOG000090586 InParanoid:Q93YW4 OMA:FPENADE PhylomeDB:Q93YW4
ArrayExpress:Q93YW4 Genevestigator:Q93YW4 Uniprot:Q93YW4
Length = 532
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 223/387 (57%), Positives = 267/387 (68%)
Query: 3 LILFSIIKMAATSGVKRARMTLDEEQPSVHVIYNSLTRASKQKLEELLQQWSEWQAQFGS 62
L+ + + +++ +GVKR R + DE+QP+VHV Y LTRASKQKLE LLQ+WSEW+A+ S
Sbjct: 96 LVHSTTLDVSSKAGVKRPRTSYDEQQPTVHVTYKHLTRASKQKLESLLQKWSEWEAENTS 155
Query: 63 SSNDPNEGIEFGEQTFFPAIRVGKAKGPAVSFWIDNQTRNQQNKNFIPSDSHGTPLYDRG 122
+ D + E GE+T FPAIRVG K +VSFWIDNQT ++ ++F+ +S TPLYDR
Sbjct: 156 LAQDQEQLFESGEETCFPAIRVGLQKTSSVSFWIDNQTGHKPLEDFVLVESSTTPLYDRK 215
Query: 123 YALGLTSGDGSSNLEGGLEIIDD-ASRCFNCGSYSHSLKECPKPRDKDAVNNARKQHKSK 181
+A+GL S DGS N+EGGLEIIDD RCFNCG YSHSL+ECP+P D+ AVN+ARK KSK
Sbjct: 216 FAIGLNSADGSRNVEGGLEIIDDDPPRCFNCGGYSHSLRECPRPFDRSAVNSARKLQKSK 275
Query: 182 RNQNSAS-RNPMRYYQNSAGGKYDGLRPGALDAETRQLLGLGELDPPPWLHRMRELGYPP 240
RNQNS+ R P RYYQ + GKYDGL+PG LDAETRQLL LGELDPPPWL+RMRE+GYPP
Sbjct: 276 RNQNSSGPRLPSRYYQKTQTGKYDGLKPGTLDAETRQLLNLGELDPPPWLNRMREIGYPP 335
Query: 241 GYLDSEDDDQPSGITIYADG-EIKEG--QEDGEIIETGR--PASKRKMTTEFPGINAPIP 295
GYL EDD SGITI+ + E +E EDGEI+E P + K T EFPGINAP P
Sbjct: 336 GYLAPEDDHL-SGITIFGEEVETREEIESEDGEILEKANHPPEPQMKKTVEFPGINAPFP 394
Query: 296 ENADERLWAAXXXXXXXXXXXXXXXXXXXXESISRGRYHEQRWSR--DYRDDGPPGVDPV 353
ENADE LW A S GR+ +Q+ SR DYRDDGP GV+P
Sbjct: 395 ENADEWLWEAAPSHR---------------NSSRSGRWQQQKTSRGHDYRDDGPLGVEP- 438
Query: 354 SSYPPRYGG-YDY------YSSHSRSP 373
SSYPPRYG YDY Y S SRSP
Sbjct: 439 SSYPPRYGSRYDYGYGSNEYGSRSRSP 465
>TAIR|locus:2809302 [details] [associations]
symbol:AT1G67210 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:CP002684
GO:GO:0008270 GO:GO:0003676 InterPro:IPR006568 Pfam:PF04046
KO:K13128 EMBL:AY086268 EMBL:DQ446405 EMBL:BT026434 IPI:IPI00528518
RefSeq:NP_564890.1 UniGene:At.35675 IntAct:Q8LD15
EnsemblPlants:AT1G67210.1 GeneID:843041 KEGG:ath:AT1G67210
TAIR:At1g67210 InParanoid:Q8LD15 OMA:EISIDME PhylomeDB:Q8LD15
ProtClustDB:CLSN2689057 Genevestigator:Q8LD15 Uniprot:Q8LD15
Length = 405
Score = 952 (340.2 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 183/301 (60%), Positives = 224/301 (74%)
Query: 9 IKMAATSGVKRARMTLDEEQPSVHVIYNSLTRASKQKLEELLQQWSEWQAQFGSSSNDPN 68
+ +++ SGVKRAR E+QPSVHV Y LTR SKQKLE LLQQWSEW+A+ S S D
Sbjct: 60 VDVSSKSGVKRARTISLEQQPSVHVTYKHLTRDSKQKLESLLQQWSEWEAEQNSLSEDQE 119
Query: 69 EGIEFGEQTFFPAIRVGKAKGPAVSFWIDNQTRNQQNKNFIPSDSHGTPLYDRGYALGLT 128
+ +E G++T+FPA+RVG K +VSFW D QT + +K +P +S TPLY+RG+ +GL
Sbjct: 120 QVLEAGDETYFPALRVGLQKTSSVSFWFDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLD 179
Query: 129 SGDGSSNLEGGLEIIDDASRCFNCGSYSHSLKECPKPRDKDAVNNARKQHKSKRNQNSAS 188
SG S+N+EGGLEIIDD RCFNCG+YSHS++ECP+P D+ AV+NAR+QHK KRNQ S
Sbjct: 180 SG--SNNVEGGLEIIDDPPRCFNCGAYSHSIRECPRPFDRSAVSNARRQHKRKRNQTPGS 237
Query: 189 RNPMRYYQNSAGGKYDGLRPGALDAETRQLLGLGELDPPPWLHRMRELGYPPGYLD-SED 247
R P RYYQ+ GKYDGL+PG+LDAETR+LLGL ELDPPPWL+RMRE+GYPPGY ED
Sbjct: 238 RLPSRYYQSLQRGKYDGLKPGSLDAETRKLLGLKELDPPPWLNRMREIGYPPGYFAVEED 297
Query: 248 DDQPSGITIYADGEIKEGQE----DGEIIETGRPASKRK-MTTEFPGINAPIPENADERL 302
DD S ITI+ + E KE +E +GEI+E P RK MT FPGINAPIPENAD L
Sbjct: 298 DDDHSRITIFGEEETKEEEEVKTEEGEILEKASPQEPRKIMTVGFPGINAPIPENADSWL 357
Query: 303 W 303
W
Sbjct: 358 W 358
Score = 52 (23.4 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 333 YHEQRWSRDYRDDGPPGVDPVSSYPPRYG-GYDY 365
YH R + GP G+ SS+PP +G YD+
Sbjct: 370 YHNHL--RPQYEMGPLGIQLSSSFPPMHGIRYDH 401
>UNIPROTKB|E2QXB5 [details] [associations]
symbol:ZCCHC8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 GO:GO:0071013
InterPro:IPR006568 Pfam:PF04046 SMART:SM00581
GeneTree:ENSGT00390000011475 KO:K13128 CTD:55596 OMA:FMNNAIS
EMBL:AAEX03014650 RefSeq:XP_534658.1 Ensembl:ENSCAFT00000012558
GeneID:477460 KEGG:cfa:477460 Uniprot:E2QXB5
Length = 709
Score = 253 (94.1 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 60/179 (33%), Positives = 94/179 (52%)
Query: 135 NLEGGLEIIDDASR----CFNCGSYSHSLKECPKPRDKDAVNNARKQHKSKRNQNSASRN 190
+LEG EI A R CFNCGS H +K+CP PR+ ++ RK++ ++ ++
Sbjct: 212 SLEGQ-EIQVKAKRPKPHCFNCGSEEHQMKDCPMPRNAARISEKRKEYMDACSETNSQNF 270
Query: 191 PMRYYQNSAGGKYDGLRPGALDAETRQLLGLGELDPPPWLHRMRELGYPPGYLDSEDDDQ 250
RY+ ++ +PG + E + LGL + PP+++RMR+LGYPPG+L E + +
Sbjct: 271 QQRYHAEEVEERFGRFKPGVISEELQDALGLTDKSLPPFIYRMRQLGYPPGWL-KEAELE 329
Query: 251 PSGITIYADGEIKEGQEDGEIIETGRPASKRKMTTE------FPGINAPIPENADERLW 303
SG+ +Y DG K+G DGE E G + +T + +PG N P + W
Sbjct: 330 NSGLALY-DG--KDGA-DGEA-EAGETQQNKSVTYDLSKLVNYPGFNISTPRGIPDE-W 382
>MGI|MGI:1917900 [details] [associations]
symbol:Zcchc8 "zinc finger, CCHC domain containing 8"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 MGI:MGI:1917900 GO:GO:0008380 GO:GO:0046872
GO:GO:0008270 GO:GO:0006397 GO:GO:0003676 Gene3D:4.10.60.10
GO:GO:0071013 InterPro:IPR006568 Pfam:PF04046 SMART:SM00581
eggNOG:NOG242619 GeneTree:ENSGT00390000011475 KO:K13128 CTD:55596
HOVERGEN:HBG079371 HOGENOM:HOG000155769 OMA:FMNNAIS
OrthoDB:EOG4P8FHV EMBL:AK017857 EMBL:AK033469 EMBL:AK156770
EMBL:AK167126 EMBL:AK167736 EMBL:BC013555 IPI:IPI00187270
RefSeq:NP_081770.3 UniGene:Mm.279427 IntAct:Q9CYA6
PhosphoSite:Q9CYA6 PaxDb:Q9CYA6 PRIDE:Q9CYA6
Ensembl:ENSMUST00000031376 GeneID:70650 KEGG:mmu:70650
UCSC:uc008zoh.2 InParanoid:Q9CYA6 NextBio:332041 PMAP-CutDB:Q9CYA6
Bgee:Q9CYA6 CleanEx:MM_ZCCHC8 Genevestigator:Q9CYA6
GermOnline:ENSMUSG00000029427 Uniprot:Q9CYA6
Length = 709
Score = 250 (93.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 50/156 (32%), Positives = 80/156 (51%)
Query: 149 CFNCGSYSHSLKECPKPRDKDAVNNARKQHKSKRNQNSASRNPMRYYQNSAGGKYDGLRP 208
CFNCGS H +KECP PR+ ++ RK++ + S RY+ ++ +P
Sbjct: 232 CFNCGSEEHQMKECPMPRNAARISEKRKEYMDACGEASGQSFQQRYHAEEVEERFGRFKP 291
Query: 209 GALDAETRQLLGLGELDPPPWLHRMRELGYPPGYLDSEDDDQPSGITIYADGEIKEGQ-E 267
G + E + LG+ + PP+++RMR+LGYPPG+L E + + SG+ +Y + +G+ E
Sbjct: 292 GVISEELQDALGVTDKSLPPFIYRMRQLGYPPGWL-KEAELENSGLALYDGNDDADGETE 350
Query: 268 DGEIIETGRPASKRKMTTEFPGINAPIPENADERLW 303
GEI K+ +PG N P + W
Sbjct: 351 TGEIQNKNVTYDLSKLVN-YPGFNISTPRGIPDE-W 384
>UNIPROTKB|Q5F3D1 [details] [associations]
symbol:ZCCHC8 "Zinc finger CCHC domain-containing protein
8" species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
InterPro:IPR006568 Pfam:PF04046 SMART:SM00581 eggNOG:NOG242619
KO:K13128 EMBL:AJ851719 IPI:IPI00595282 RefSeq:NP_001025833.1
UniGene:Gga.22730 GeneID:416862 KEGG:gga:416862 CTD:55596
HOVERGEN:HBG079371 InParanoid:Q5F3D1 NextBio:20820260
Uniprot:Q5F3D1
Length = 613
Score = 246 (91.7 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 49/157 (31%), Positives = 77/157 (49%)
Query: 147 SRCFNCGSYSHSLKECPKPRDKDAVNNARKQHKSKRNQNSASRNPMRYYQNSAGGKYDGL 206
S CFNCGS H +K+CPKPR+ ++ RK+ + S RY+ ++
Sbjct: 126 SHCFNCGSEEHQIKDCPKPRNAARISEKRKEFMEAYGEASNQNFQQRYHAEEVEERFGKF 185
Query: 207 RPGALDAETRQLLGLGELDPPPWLHRMRELGYPPGYLDSEDDDQPSGITIYADGEIKEGQ 266
+PG + E + LG+ PP+++RMR+LGYPPG+L E + + SG+ +Y DG+
Sbjct: 186 KPGVISGELQDALGVTAKSLPPFIYRMRQLGYPPGWL-KEAEMEHSGLALY-DGKDDNET 243
Query: 267 EDGEIIETGRPASKRKMTTEFPGINAPIPENADERLW 303
ED ++ +PG N P + W
Sbjct: 244 EDEGYLQPKHVTYDVSKLINYPGFNISTPSGIPDE-W 279
Score = 41 (19.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 347 PPGVDPVSSYPPRYGGYDYYSSHSRSPT 374
PPG +S+ PP G + S +PT
Sbjct: 363 PPGPPVISTPPPLPQGTPPLTPRSLTPT 390
>RGD|1309774 [details] [associations]
symbol:Zcchc8 "zinc finger, CCHC domain containing 8"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 RGD:1309774 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
EMBL:CH473973 Gene3D:4.10.60.10 GO:GO:0071013 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 GeneTree:ENSGT00390000011475 OMA:FMNNAIS
OrthoDB:EOG4P8FHV IPI:IPI00370896 UniGene:Rn.144000
Ensembl:ENSRNOT00000001668 UCSC:RGD:1309774 Uniprot:D3ZUL8
Length = 695
Score = 249 (92.7 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 49/156 (31%), Positives = 81/156 (51%)
Query: 149 CFNCGSYSHSLKECPKPRDKDAVNNARKQHKSKRNQNSASRNPMRYYQNSAGGKYDGLRP 208
CFNCGS H +KECP PR+ ++ RK++ + ++ RY+ ++ +P
Sbjct: 231 CFNCGSEEHQMKECPMPRNAARISEKRKEYMDACGEANSQSFQQRYHAEEVEERFGRFKP 290
Query: 209 GALDAETRQLLGLGELDPPPWLHRMRELGYPPGYLDSEDDDQPSGITIYADGEIKEGQ-E 267
G + E + LG+ + PP+++RMR+LGYPPG+L E + + SG+ +Y + +G+ E
Sbjct: 291 GVISEELQDALGVTDKSLPPFIYRMRQLGYPPGWL-KEAELETSGLALYDGNDDADGETE 349
Query: 268 DGEIIETGRPASKRKMTTEFPGINAPIPENADERLW 303
GEI K+ +PG N P + W
Sbjct: 350 TGEIQNKNVTYDLSKLVN-YPGFNISTPRGIPDE-W 383
>UNIPROTKB|F1MM78 [details] [associations]
symbol:ZCCHC8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 GO:GO:0071013 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 GeneTree:ENSGT00390000011475 OMA:FMNNAIS
EMBL:DAAA02045251 IPI:IPI00694516 Ensembl:ENSBTAT00000008035
Uniprot:F1MM78
Length = 710
Score = 244 (91.0 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 52/161 (32%), Positives = 84/161 (52%)
Query: 149 CFNCGSYSHSLKECPKPRDKDAVNNARKQHKSKRNQNSASRNPMRYYQNSAGGKYDGLRP 208
CFNCGS H +K+CP PR+ ++ RK++ + + RY+ ++ +P
Sbjct: 231 CFNCGSEEHQMKDCPMPRNAARISEKRKEYMDACGETNNQNFQQRYHAEEVEERFGRFKP 290
Query: 209 GALDAETRQLLGLGELDPPPWLHRMRELGYPPGYLDSEDDDQPSGITIYADGEIKEGQED 268
G + E + LG+ + PP+++RMR+LGYPPG+L E + + SG+ +Y DG K+G D
Sbjct: 291 GVISEELQDALGVTDKSLPPFIYRMRQLGYPPGWL-KEAELENSGLALY-DG--KDGA-D 345
Query: 269 GEIIETGRPASKRKMTTE------FPGINAPIPENADERLW 303
GE E G + +T + +PG N P + W
Sbjct: 346 GET-EAGEVQQNKSVTYDLSKLVNYPGFNISTPRGIPDE-W 384
>UNIPROTKB|F1NEG3 [details] [associations]
symbol:F1NEG3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 GO:GO:0071013 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 GeneTree:ENSGT00390000011475
IPI:IPI00595282 EMBL:AADN02034914 Ensembl:ENSGALT00000007145
Uniprot:F1NEG3
Length = 684
Score = 242 (90.2 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 50/159 (31%), Positives = 80/159 (50%)
Query: 147 SRCFNCGSYSHSLKECPKPRDKDAVNNARKQHKSKRNQNSASRNPMRYYQNSAGGKYDGL 206
S CFNCGS H +K+CPKPR+ ++ RK+ + S RY+ ++
Sbjct: 222 SHCFNCGSEEHQIKDCPKPRNAARISEKRKEFMEAYGEASNQNFQQRYHAEEVEERFGKF 281
Query: 207 RPGALDAETRQLLGLGELDPPPWLHRMRELGYPPGYLDSEDDDQPSGITIYADGE-IKEG 265
+PG + E + LG+ PP+++RMR+LGYPPG+L E + + SG+ +Y DG+ I +
Sbjct: 282 KPGVISGELQDALGVTAKSLPPFIYRMRQLGYPPGWL-KEAEMEHSGLALY-DGKGIDDN 339
Query: 266 Q-EDGEIIETGRPASKRKMTTEFPGINAPIPENADERLW 303
+ ED ++ +PG N P + W
Sbjct: 340 ETEDEGYLQPKHVTYDVSKLINYPGFNISTPSGIPDE-W 377
>UNIPROTKB|Q6NZY4 [details] [associations]
symbol:ZCCHC8 "Zinc finger CCHC domain-containing protein
8" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
GO:GO:0000398 GO:GO:0071013 InterPro:IPR006568 Pfam:PF04046
SMART:SM00581 eggNOG:NOG242619 KO:K13128 CTD:55596
HOVERGEN:HBG079371 EMBL:AK027702 EMBL:AK074638 EMBL:AL157433
EMBL:AL157434 EMBL:BC017704 EMBL:BC065918 IPI:IPI00166422
IPI:IPI00556594 PIR:T46929 PIR:T46930 RefSeq:NP_060082.2
UniGene:Hs.37706 ProteinModelPortal:Q6NZY4 IntAct:Q6NZY4
MINT:MINT-1187494 STRING:Q6NZY4 PhosphoSite:Q6NZY4 DMDM:66774213
PaxDb:Q6NZY4 PRIDE:Q6NZY4 Ensembl:ENST00000336229
Ensembl:ENST00000536306 Ensembl:ENST00000543897 GeneID:55596
KEGG:hsa:55596 UCSC:uc001ucm.3 GeneCards:GC12M122958
H-InvDB:HIX0011095 HGNC:HGNC:25265 HPA:HPA037483 HPA:HPA037484
neXtProt:NX_Q6NZY4 PharmGKB:PA134889410 HOGENOM:HOG000155769
InParanoid:Q6NZY4 OMA:FMNNAIS OrthoDB:EOG4P8FHV PhylomeDB:Q6NZY4
GenomeRNAi:55596 NextBio:60130 PMAP-CutDB:Q6NZY4
ArrayExpress:Q6NZY4 Bgee:Q6NZY4 CleanEx:HS_ZCCHC8
Genevestigator:Q6NZY4 GermOnline:ENSG00000033030 Uniprot:Q6NZY4
Length = 707
Score = 242 (90.2 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 59/179 (32%), Positives = 92/179 (51%)
Query: 135 NLEGGLEIIDDASR----CFNCGSYSHSLKECPKPRDKDAVNNARKQHKSKRNQNSASRN 190
+LEG EI A R CFNCGS H +K+CP PR+ ++ RK++ + +
Sbjct: 212 SLEGQ-EIQVKAKRPKPHCFNCGSEEHQMKDCPMPRNAARISEKRKEYMDACGEANNQNF 270
Query: 191 PMRYYQNSAGGKYDGLRPGALDAETRQLLGLGELDPPPWLHRMRELGYPPGYLDSEDDDQ 250
RY+ ++ +PG + E + LG+ + PP+++RMR+LGYPPG+L E + +
Sbjct: 271 QQRYHAEEVEERFGRFKPGVISEELQDALGVTDKSLPPFIYRMRQLGYPPGWL-KEAELE 329
Query: 251 PSGITIYADGEIKEGQEDGEIIETGRPASKRKMTTE------FPGINAPIPENADERLW 303
SG+ +Y DG K+G DGE E G + +T + +PG N P + W
Sbjct: 330 NSGLALY-DG--KDGT-DGET-EVGEIQQNKSVTYDLSKLVNYPGFNISTPRGIPDE-W 382
>ZFIN|ZDB-GENE-060526-6 [details] [associations]
symbol:zcchc8 "zinc finger, CCHC domain containing 8"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 SMART:SM00343 ZFIN:ZDB-GENE-060526-6
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 eggNOG:NOG242619 HOVERGEN:HBG079371
HOGENOM:HOG000155769 OrthoDB:EOG4P8FHV EMBL:BC125815
IPI:IPI00495579 UniGene:Dr.17330 InParanoid:A0JMB6
ArrayExpress:A0JMB6 Uniprot:A0JMB6
Length = 694
Score = 236 (88.1 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 53/149 (35%), Positives = 80/149 (53%)
Query: 149 CFNCGSYSHSLKECPKPRDKDAVNNARKQHKSKRNQNSASRNPMRYYQNSAGGKYDGLRP 208
CFNC S H L++CPKP+D +N RK+ +QN+ R+ RY+ ++ +P
Sbjct: 221 CFNCCSEDHQLRDCPKPKDMARINEKRKEF----SQNN--RSNQRYHAEEVEERFAKYKP 274
Query: 209 GALDAETRQLLGLGELDPPPWLHRMRELGYPPGYLDSEDDDQPSGITIYADGEIKEGQED 268
G + + LG+ PP+++RMRELGYPPG+L E + + SG+ +Y DG +G E+
Sbjct: 275 GIMSQDLLDALGMTTNTLPPFIYRMRELGYPPGWL-KEAELENSGLMLY-DGS-NDGDEN 331
Query: 269 GEIIETGRPASKRKMTTEFPGINAPIPEN 297
+ SK +FPG N P N
Sbjct: 332 NHSQKISYDVSK---LVDFPGFNVNAPPN 357
>UNIPROTKB|F1REW6 [details] [associations]
symbol:LOC100739132 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 GeneTree:ENSGT00390000011475 OMA:FMNNAIS
EMBL:AEMK01195278 EMBL:CU607066 Ensembl:ENSSSCT00000010734
Uniprot:F1REW6
Length = 706
Score = 226 (84.6 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 59/180 (32%), Positives = 92/180 (51%)
Query: 135 NLEGGLEIIDDASR----CFNCGSYSHSLKECPKPRDKDAVNNARKQHKSKRNQNSASRN 190
+LEG EI A R CFNCGS H +K+CP PR+ ++ RK++ + +
Sbjct: 213 SLEGQ-EIQVKAKRPKPHCFNCGSEEHQMKDCPMPRNAARISEKRKEYMDACGETNNQNF 271
Query: 191 PMRYYQNSAGGKYDGLRPGALDA-ETRQLLGLGELDPPPWLHRMRELGYPPGYLDSEDDD 249
RY+ ++ G +P + E + LG+ + PP+++RMR+LGYPPG+L E +
Sbjct: 272 QQRYHAEEVEERF-GRKPEIISTFELQDALGVTDKSLPPFIYRMRQLGYPPGWL-KEAEL 329
Query: 250 QPSGITIYADGEIKEGQEDGEIIETGRPASKRKMTTE------FPGINAPIPENADERLW 303
+ SG+ +Y DG K+G DGE E G + +T + +PG N P + W
Sbjct: 330 ENSGLALY-DG--KDGA-DGET-EAGEVQQNKSVTYDLSKLVNYPGFNISTPRGIPDE-W 383
>UNIPROTKB|F5GX80 [details] [associations]
symbol:ZCCHC8 "Zinc finger CCHC domain-containing protein
8" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
GO:GO:0005634 InterPro:IPR006568 Pfam:PF04046 SMART:SM00581
HGNC:HGNC:25265 EMBL:AC127002 IPI:IPI01013833
Ensembl:ENST00000544054 ArrayExpress:F5GX80 Bgee:F5GX80
Uniprot:F5GX80
Length = 211
Score = 195 (73.7 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 45/151 (29%), Positives = 77/151 (50%)
Query: 159 LKECPKPRDKDAVNNARKQHKSKRNQNSASRNPMRYYQNSAGGKYDGLRPGALDAETRQL 218
+K+CP PR+ ++ RK++ + + RY+ ++ +PG + E +
Sbjct: 1 MKDCPMPRNAARISEKRKEYMDACGEANNQNFQQRYHAEEVEERFGRFKPGVISEELQDA 60
Query: 219 LGLGELDPPPWLHRMRELGYPPGYLDSEDDDQPSGITIYADGEIKEGQEDGEIIETGRPA 278
LG+ + PP+++RMR+LGYPPG+L E + + SG+ +Y DG K+G DGE E G
Sbjct: 61 LGVTDKSLPPFIYRMRQLGYPPGWL-KEAELENSGLALY-DG--KDGT-DGET-EVGEIQ 114
Query: 279 SKRKMTTE------FPGINAPIPENADERLW 303
+ +T + +PG N P + W
Sbjct: 115 QNKSVTYDLSKLVNYPGFNISTPRGIPDE-W 144
>UNIPROTKB|F5H6J5 [details] [associations]
symbol:ZCCHC8 "Zinc finger CCHC domain-containing protein
8" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
GO:GO:0005634 InterPro:IPR006568 Pfam:PF04046 SMART:SM00581
HGNC:HGNC:25265 EMBL:AC127002 IPI:IPI01015185
Ensembl:ENST00000536663 ArrayExpress:F5H6J5 Bgee:F5H6J5
Uniprot:F5H6J5
Length = 185
Score = 195 (73.7 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 45/151 (29%), Positives = 77/151 (50%)
Query: 159 LKECPKPRDKDAVNNARKQHKSKRNQNSASRNPMRYYQNSAGGKYDGLRPGALDAETRQL 218
+K+CP PR+ ++ RK++ + + RY+ ++ +PG + E +
Sbjct: 1 MKDCPMPRNAARISEKRKEYMDACGEANNQNFQQRYHAEEVEERFGRFKPGVISEELQDA 60
Query: 219 LGLGELDPPPWLHRMRELGYPPGYLDSEDDDQPSGITIYADGEIKEGQEDGEIIETGRPA 278
LG+ + PP+++RMR+LGYPPG+L E + + SG+ +Y DG K+G DGE E G
Sbjct: 61 LGVTDKSLPPFIYRMRQLGYPPGWL-KEAELENSGLALY-DG--KDGT-DGET-EVGEIQ 114
Query: 279 SKRKMTTE------FPGINAPIPENADERLW 303
+ +T + +PG N P + W
Sbjct: 115 QNKSVTYDLSKLVNYPGFNISTPRGIPDE-W 144
>FB|FBgn0035021 [details] [associations]
symbol:CG4622 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:AE013599
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 InterPro:IPR006568
Pfam:PF04046 SMART:SM00581 eggNOG:NOG242619
GeneTree:ENSGT00390000011475 KO:K13128 EMBL:AY061482 EMBL:BT021468
EMBL:BT044256 RefSeq:NP_001033971.2 RefSeq:NP_611929.1
UniGene:Dm.3584 IntAct:Q2PE14 MINT:MINT-1011865 PaxDb:Q2PE14
PRIDE:Q2PE14 EnsemblMetazoa:FBtr0072344 EnsemblMetazoa:FBtr0300490
GeneID:37919 KEGG:dme:Dmel_CG4622 UCSC:CG4622-RB
FlyBase:FBgn0035021 InParanoid:Q2PE14 OMA:TGKYEQM OrthoDB:EOG4DV431
PhylomeDB:Q2PE14 GenomeRNAi:37919 NextBio:806044 Bgee:Q2PE14
Uniprot:Q2PE14
Length = 553
Score = 209 (78.6 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 55/148 (37%), Positives = 81/148 (54%)
Query: 147 SRCFNCGSYSHSLKECPKPRDKDAVNNARKQHKSKRNQNSASRNPMRYYQNSAGGKYDGL 206
S CFNCG HSL++C KPR+ + ARK+ S+ RY+ ++ ++ +
Sbjct: 183 SSCFNCGDTEHSLRDCTKPRNNSRITRARKKMTSRTE---------RYHVDTEQ-RFGHI 232
Query: 207 RPGALDAETRQLLGLGELDPPPWLHRMRELGYPPGYLDSEDDDQPSGITIY-ADG-EI-K 263
RPG + +TR +G P +RMR LGYPP +L+ E Q SGI ++ ADG E+ K
Sbjct: 233 RPGKISTKTRHAMGYSRGQLPFIFYRMRVLGYPPAWLE-EAKVQSSGIALFNADGSEVTK 291
Query: 264 EGQEDGEIIETGRPASKRKMTTEFPGIN 291
+E+GE ET + K+ E+PG N
Sbjct: 292 SDEEEGES-ETFK-YDVNKIV-EYPGFN 316
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.133 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 438 383 0.00091 117 3 11 23 0.48 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 611 (65 KB)
Total size of DFA: 279 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.10u 0.22s 38.32t Elapsed: 00:00:02
Total cpu time: 38.10u 0.22s 38.32t Elapsed: 00:00:02
Start: Sat May 11 12:13:18 2013 End: Sat May 11 12:13:20 2013